CSPI03G41070 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G41070
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionPentatricopeptide repeat-containing protein family
LocationChr3 : 35152086 .. 35153368 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TATGATTCGTGGATATTCTAAGCTGGGAATGATGGATGATGCACAAGACTTGTTTGATAAAATGGGGCAGCGGAATTCATTCTCTTGGACAACTATGGTGGCTGGGTATGCCAACTGGGGCAACATGAAAGCTGCAAAGCAGTTATATGATGCAATGCCAGAGAAAAATCCAGTTTCACAGCTTGCCATGATAGCAGGATATGGGAGGTGTGGTGATGTAGCAGAGGCCGAAAGGATCTTCGGTGAAATATTGGTACCAGATTCATCGTGTTGTGCCGCAATGGTAGCTTGTTATTCTCAAAATGGGTATGGAAAGGAGGCCATTGAAATGTACAAGCAAATGAAAGAAAAAAATTTGGGAACCAATGAGGTAGCACTTGTAGGAGCATTATCCGCTTGTGTTCAACTTGGGGATGTTGAGATGGCGAGCAAATTAATTGACCAGGTTGATGAAGGGTGCTGCGGTAAGTTCGGTACACTTATATTCAGAGTCAAAGGGTCCTATCCAAGCACACTAAATCTCTAAAGACGACTTAAGTTTAACTAATATGATAGGATATAGAATCAAGCAAGAGGAACGATTTAAAATCCAAATTCTAACACTTAGTTGGCTTTTCATACATGTTTCAATTGCAGATCGGACTCTATTTGTCTCCAATGCATTGATCCACAAGCATTCGAAGTTCGGTAATATTGAAAGGGCACAAGAAGAATTCAATAGAATGAAGGATAGAGATGTTGTAACTTATAGTACGTTGATCATAGCCCTGGCTGACCATGGAAAAGCCAAGGAAGCCTTGGATCTGTTCTCCAAGATGGAAGAAGAAGGCATAAAGCCAAATCAAATTTGTTTCATTGGCGTACTAAATGCATGTGCCCATGCAGGGTTGATTGAACAAGGATGCAAGTATTTTGAACTTATGAGGAAGGGTTTTGGCATTGAGCCACAGAAGGGGCATTATGCATGCATGGTTGATCTCCTTGGAAGAGCTGGTGAGGTTGAAATGGCATACAATGTTATTAAGGGAGCGAGGGAAATTGATGCTAAAACATGGGGGTCATTGCTAGGAGCTTGCAAGATCCATGGTAATTTGGAGGTGGGGGAGATTGCTGCTAAACATCTATTTGAAATGGAACCTGAGAATACCGGAAACTACGTACTTTTGGCGAATACATATGCTCAGATGAAGGAATGGAATGAAGCAGAAAAGGTTAGGAACGTGATGGTTGAAAGAGGAATCAAAAAATTTCCTGGGTATAGCTGGGTTTCAAGATCTTCATGA

mRNA sequence

ATGATTCGTGGATATTCTAAGCTGGGAATGATGGATGATGCACAAGACTTGTTTGATAAAATGGGGCAGCGGAATTCATTCTCTTGGACAACTATGGTGGCTGGGTATGCCAACTGGGGCAACATGAAAGCTGCAAAGCAGTTATATGATGCAATGCCAGAGAAAAATCCAGTTTCACAGCTTGCCATGATAGCAGGATATGGGAGGTGTGGTGATGTAGCAGAGGCCGAAAGGATCTTCGGTGAAATATTGGTACCAGATTCATCGTGTTGTGCCGCAATGGTAGCTTGTTATTCTCAAAATGGGTATGGAAAGGAGGCCATTGAAATGTACAAGCAAATGAAAGAAAAAAATTTGGGAACCAATGAGGTAGCACTTGTAGGAGCATTATCCGCTTGTGTTCAACTTGGGGATGTTGAGATGGCGAGCAAATTAATTGACCAGGTTGATGAAGGGTGCTGCGATCGGACTCTATTTGTCTCCAATGCATTGATCCACAAGCATTCGAAGTTCGGTAATATTGAAAGGGCACAAGAAGAATTCAATAGAATGAAGGATAGAGATGTTGTAACTTATAGTACGTTGATCATAGCCCTGGCTGACCATGGAAAAGCCAAGGAAGCCTTGGATCTGTTCTCCAAGATGGAAGAAGAAGGCATAAAGCCAAATCAAATTTGTTTCATTGGCGTACTAAATGCATGTGCCCATGCAGGGTTGATTGAACAAGGATGCAAGTATTTTGAACTTATGAGGAAGGGTTTTGGCATTGAGCCACAGAAGGGGCATTATGCATGCATGGTTGATCTCCTTGGAAGAGCTGGTGAGGTTGAAATGGCATACAATGTTATTAAGGGAGCGAGGGAAATTGATGCTAAAACATGGGGGTCATTGCTAGGAGCTTGCAAGATCCATGGTAATTTGGAGGTGGGGGAGATTGCTGCTAAACATCTATTTGAAATGGAACCTGAGAATACCGGAAACTACGTACTTTTGGCGAATACATATGCTCAGATGAAGGAATGGAATGAAGCAGAAAAGGTTAGGAACGTGATGGTTGAAAGAGGAATCAAAAAATTTCCTGGGTATAGCTGGGTTTCAAGATCTTCATGA

Coding sequence (CDS)

ATGATTCGTGGATATTCTAAGCTGGGAATGATGGATGATGCACAAGACTTGTTTGATAAAATGGGGCAGCGGAATTCATTCTCTTGGACAACTATGGTGGCTGGGTATGCCAACTGGGGCAACATGAAAGCTGCAAAGCAGTTATATGATGCAATGCCAGAGAAAAATCCAGTTTCACAGCTTGCCATGATAGCAGGATATGGGAGGTGTGGTGATGTAGCAGAGGCCGAAAGGATCTTCGGTGAAATATTGGTACCAGATTCATCGTGTTGTGCCGCAATGGTAGCTTGTTATTCTCAAAATGGGTATGGAAAGGAGGCCATTGAAATGTACAAGCAAATGAAAGAAAAAAATTTGGGAACCAATGAGGTAGCACTTGTAGGAGCATTATCCGCTTGTGTTCAACTTGGGGATGTTGAGATGGCGAGCAAATTAATTGACCAGGTTGATGAAGGGTGCTGCGATCGGACTCTATTTGTCTCCAATGCATTGATCCACAAGCATTCGAAGTTCGGTAATATTGAAAGGGCACAAGAAGAATTCAATAGAATGAAGGATAGAGATGTTGTAACTTATAGTACGTTGATCATAGCCCTGGCTGACCATGGAAAAGCCAAGGAAGCCTTGGATCTGTTCTCCAAGATGGAAGAAGAAGGCATAAAGCCAAATCAAATTTGTTTCATTGGCGTACTAAATGCATGTGCCCATGCAGGGTTGATTGAACAAGGATGCAAGTATTTTGAACTTATGAGGAAGGGTTTTGGCATTGAGCCACAGAAGGGGCATTATGCATGCATGGTTGATCTCCTTGGAAGAGCTGGTGAGGTTGAAATGGCATACAATGTTATTAAGGGAGCGAGGGAAATTGATGCTAAAACATGGGGGTCATTGCTAGGAGCTTGCAAGATCCATGGTAATTTGGAGGTGGGGGAGATTGCTGCTAAACATCTATTTGAAATGGAACCTGAGAATACCGGAAACTACGTACTTTTGGCGAATACATATGCTCAGATGAAGGAATGGAATGAAGCAGAAAAGGTTAGGAACGTGATGGTTGAAAGAGGAATCAAAAAATTTCCTGGGTATAGCTGGGTTTCAAGATCTTCATGA
Homology
[Close]
BLAST of CSPI03G41070 vs. Swiss-Prot
Match: PP301_ARATH (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 8.5e-87
Identity = 154/366 (42.08%), Postives = 234/366 (63.93%), Query Frame = 1 

Query: 1   MIRGYSKLGMMDDAQDLFDKMGQRNSFSWTTMVAGYANWGNMKAAKQLYDAMPEKNPVSQ 60
           M+ GY +  M+++A++LFDKM +RN  SW  M+AGY     M+ AK+L+D MP +N  + 
Sbjct: 287 MVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTW 346

Query: 61  LAMIAGYGRCGDVAEAERIFGEILVPDSSCCAAMVACYSQNGYGKEAIEMYKQMKEKNLG 120
             MI GY +CG ++EA+ +F ++   D    AAM+A YSQ+G+  EA+ ++ QM+ +   
Sbjct: 347 NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGR 406

Query: 121 TNEVALVGALSACVQLGDVEMASKLIDQVDEGCCDRTLFVSNALIHKHSKFGNIERAQEE 180
            N  +   ALS C  +  +E+  +L  ++ +G  +   FV NAL+  + K G+IE A + 
Sbjct: 407 LNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDL 466

Query: 181 FNRMKDRDVVTYSTLIIALADHGKAKEALDLFSKMEEEGIKPNQICFIGVLNACAHAGLI 240
           F  M  +D+V+++T+I   + HG  + AL  F  M+ EG+KP+    + VL+AC+H GL+
Sbjct: 467 FKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLV 526

Query: 241 EQGCKYFELMRKGFGIEPQKGHYACMVDLLGRAGEVEMAYNVIKGAR-EIDAKTWGSLLG 300
           ++G +YF  M + +G+ P   HYACMVDLLGRAG +E A+N++K    E DA  WG+LLG
Sbjct: 527 DKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLG 586

Query: 301 ACKIHGNLEVGEIAAKHLFEMEPENTGNYVLLANTYAQMKEWNEAEKVRNVMVERGIKKF 360
           A ++HGN E+ E AA  +F MEPEN+G YVLL+N YA    W +  K+R  M ++G+KK 
Sbjct: 587 ASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKV 646

Query: 361 PGYSWV 366
           PGYSW+
Sbjct: 647 PGYSWI 652

[Close]
BLAST of CSPI03G41070 vs. Swiss-Prot
Match: PP403_ARATH (Putative pentatricopeptide repeat-containing protein At5g37570 OS=Arabidopsis thaliana GN=PCMP-E37 PE=3 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 3.4e-80
Identity = 145/369 (39.30%), Postives = 229/369 (62.06%), Query Frame = 1 

Query: 1   MIRGYSKLGMMDDAQDLFDKMGQRNSFSWTTMVAGYANWGNMKAAKQLYDAMPEKNPVSQ 60
           ++  Y K G +++A+ +FD M +RN  SW  +V G    G++  AK+L+D MP+++ +S 
Sbjct: 182 LVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISY 241

Query: 61  LAMIAGYGRCGDVAEAERIFGEILVPDSSCCAAMVACYSQNGYGKEAIEMYKQMKEKNLG 120
            +MI GY + GD+  A  +F E    D    +A++  Y+QNG   EA +++ +M  KN+ 
Sbjct: 242 TSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVK 301

Query: 121 TNEVALVGALSACVQLGDVEMASKLIDQVDEGCCD-RTLFVSNALIHKHSKFGNIERAQE 180
            +E  +VG +SAC Q+G  E+  K+   + +      + +V  ALI  ++K G+++RA +
Sbjct: 302 PDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAK 361

Query: 181 EFNRMKDRDVVTYSTLIIALADHGKAKEALDLFSKMEEEGIKPNQICFIGVLNACAHAGL 240
            F  M  RD+V+Y +++  +A HG   EA+ LF KM +EGI P+++ F  +L  C  + L
Sbjct: 362 LFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRL 421

Query: 241 IEQGCKYFELMRKGFGIEPQKGHYACMVDLLGRAGEVEMAYNVIKGAR-EIDAKTWGSLL 300
           +E+G +YFELMRK + I     HY+C+V+LL R G+++ AY +IK    E  A  WGSLL
Sbjct: 422 VEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLL 481

Query: 301 GACKIHGNLEVGEIAAKHLFEMEPENTGNYVLLANTYAQMKEWNEAEKVRNVMVERGIKK 360
           G C +HGN E+ E+ A+HLFE+EP++ G+YVLL+N YA +  W +   +R+ M E GI K
Sbjct: 482 GGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITK 541

Query: 361 FPGYSWVSR 368
             G SW+SR
Sbjct: 542 ICGRSWISR 550

[Close]
BLAST of CSPI03G41070 vs. Swiss-Prot
Match: PP417_ARATH (Pentatricopeptide repeat-containing protein At5g44230 OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 5.7e-75
Identity = 144/369 (39.02%), Postives = 221/369 (59.89%), Query Frame = 1 

Query: 1   MIRGYSKLGMMDDAQDLFDKMGQRNSFSWTTMVAGYANWGNMKAAKQLYDAMPEKNPVSQ 60
           MI  Y K   +D A+ +FD+M +R+  SWT ++A YA  GNM+ A +L++++P K+ V+ 
Sbjct: 190 MIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAW 249

Query: 61  LAMIAGYGRCGDVAEAERIFGEILVPDSSCCAAMVACYSQNGYGKEAIEMYKQMKEKNLG 120
            AM+ G+                               +QN   +EA+E + +M++  + 
Sbjct: 250 TAMVTGF-------------------------------AQNAKPQEALEYFDRMEKSGIR 309

Query: 121 TNEVALVGALSACVQLGDVEMASKLIDQVDEGCCDRT--LFVSNALIHKHSKFGNIERAQ 180
            +EV + G +SAC QLG  + A + +    +     +  + + +ALI  +SK GN+E A 
Sbjct: 310 ADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAV 369

Query: 181 EEFNRMKDRDVVTYSTLIIALADHGKAKEALDLFSKM-EEEGIKPNQICFIGVLNACAHA 240
             F  M +++V TYS++I+ LA HG+A+EAL LF  M  +  IKPN + F+G L AC+H+
Sbjct: 370 NVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHS 429

Query: 241 GLIEQGCKYFELMRKGFGIEPQKGHYACMVDLLGRAGEVEMAYNVIKGAR-EIDAKTWGS 300
           GL++QG + F+ M + FG++P + HY CMVDLLGR G ++ A  +IK    E     WG+
Sbjct: 430 GLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGA 489

Query: 301 LLGACKIHGNLEVGEIAAKHLFEMEPENTGNYVLLANTYAQMKEWNEAEKVRNVMVERGI 360
           LLGAC+IH N E+ EIAA+HLFE+EP+  GNY+LL+N YA   +W    +VR ++ E+G+
Sbjct: 490 LLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGL 527

Query: 361 KKFPGYSWV 366
           KK P  SWV
Sbjct: 550 KKTPAVSWV 527

[Close]
BLAST of CSPI03G41070 vs. Swiss-Prot
Match: PPR25_ARATH (Pentatricopeptide repeat-containing protein At1g09410 OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2)

HSP 1 Score: 276.2 bits (705), Expect = 5.3e-73
Identity = 130/366 (35.52%), Postives = 221/366 (60.38%), Query Frame = 1 

Query: 1   MIRGYSKLGMMDDAQDLFDKMGQRNSFSWTTMVAGYANWGNMKAAKQLYDAMPEKNPVSQ 60
           M+ GY +   +DDA+ +FD M ++   SWT+M+ GY   G ++ A++L++ MP K  ++ 
Sbjct: 209 MVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIAC 268

Query: 61  LAMIAGYGRCGDVAEAERIFGEILVPDSSCCAAMVACYSQNGYGKEAIEMYKQMKEKNLG 120
            AMI+G G+ G++A+A R+F  +   + +    ++  + +NG+  EA++++  M+++ + 
Sbjct: 269 NAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVR 328

Query: 121 TNEVALVGALSACVQLGDVEMASKLIDQVDEGCCDRTLFVSNALIHKHSKFGNIERAQEE 180
                L+  LS C  L  +    ++  Q+     D  ++V++ L+  + K G + +++  
Sbjct: 329 PTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLI 388

Query: 181 FNRMKDRDVVTYSTLIIALADHGKAKEALDLFSKMEEEG-IKPNQICFIGVLNACAHAGL 240
           F+R   +D++ ++++I   A HG  +EAL +F +M   G  KPN++ F+  L+AC++AG+
Sbjct: 389 FDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGM 448

Query: 241 IEQGCKYFELMRKGFGIEPQKGHYACMVDLLGRAGEVEMAYNVIKGAR-EIDAKTWGSLL 300
           +E+G K +E M   FG++P   HYACMVD+LGRAG    A  +I     E DA  WGSLL
Sbjct: 449 VEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLL 508

Query: 301 GACKIHGNLEVGEIAAKHLFEMEPENTGNYVLLANTYAQMKEWNEAEKVRNVMVERGIKK 360
           GAC+ H  L+V E  AK L E+EPEN+G Y+LL+N YA    W +  ++R +M  R ++K
Sbjct: 509 GACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRK 568

Query: 361 FPGYSW 365
            PG SW
Sbjct: 569 SPGCSW 574

[Close]
BLAST of CSPI03G41070 vs. Swiss-Prot
Match: PPR84_ARATH (Pentatricopeptide repeat-containing protein At1g56690, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 1.7e-71
Identity = 127/366 (34.70%), Postives = 218/366 (59.56%), Query Frame = 1 

Query: 1   MIRGYSKLGMMDDAQDLFDKMGQRNSFSWTTMVAGYANWGNMKAAKQLYDAMPEKNPVSQ 60
           MI GY +   +D A+ LF+ M ++   SWT+M+ GY   G ++ A++ ++ MP K  ++ 
Sbjct: 209 MITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIAC 268

Query: 61  LAMIAGYGRCGDVAEAERIFGEILVPDSSCCAAMVACYSQNGYGKEAIEMYKQMKEKNLG 120
            AMI G+G  G++++A R+F  +   D++    M+  Y + G+  EA++++ QM+++ + 
Sbjct: 269 NAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVR 328

Query: 121 TNEVALVGALSACVQLGDVEMASKLIDQVDEGCCDRTLFVSNALIHKHSKFGNIERAQEE 180
            +  +L+  LS C  L  ++   ++   +     D  ++V++ L+  + K G + +A+  
Sbjct: 329 PSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLV 388

Query: 181 FNRMKDRDVVTYSTLIIALADHGKAKEALDLFSKMEEEGIKPNQICFIGVLNACAHAGLI 240
           F+R   +D++ ++++I   A HG  +EAL +F +M   G  PN++  I +L AC++AG +
Sbjct: 389 FDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKL 448

Query: 241 EQGCKYFELMRKGFGIEPQKGHYACMVDLLGRAGEVEMAYNVIKGAR-EIDAKTWGSLLG 300
           E+G + FE M   F + P   HY+C VD+LGRAG+V+ A  +I+    + DA  WG+LLG
Sbjct: 449 EEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLG 508

Query: 301 ACKIHGNLEVGEIAAKHLFEMEPENTGNYVLLANTYAQMKEWNEAEKVRNVMVERGIKKF 360
           ACK H  L++ E+AAK LFE EP+N G YVLL++  A   +W +   VR  M    + KF
Sbjct: 509 ACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKF 568

Query: 361 PGYSWV 366
           PG SW+
Sbjct: 569 PGCSWI 574

[Close]
BLAST of CSPI03G41070 vs. TrEMBL
Match: A0A0A0LDB3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G846040 PE=4 SV=1)

HSP 1 Score: 760.4 bits (1962), Expect = 1.0e-216
Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 1 

Query: 1   MIRGYSKLGMMDDAQDLFDKMGQRNSFSWTTMVAGYANWGNMKAAKQLYDAMPEKNPVSQ 60
           MIRGYSKLGMMDDAQDLFDKMGQRNSFSWTTMVAGYANWGNMKAAKQLYDAMPEKNPVSQ
Sbjct: 190 MIRGYSKLGMMDDAQDLFDKMGQRNSFSWTTMVAGYANWGNMKAAKQLYDAMPEKNPVSQ 249

Query: 61  LAMIAGYGRCGDVAEAERIFGEILVPDSSCCAAMVACYSQNGYGKEAIEMYKQMKEKNLG 120
           LAMIAGYGRCGDVAEAERIFGEILVPDSSCCAAMVACYSQNGYGKEAIEMYKQMKEKNLG
Sbjct: 250 LAMIAGYGRCGDVAEAERIFGEILVPDSSCCAAMVACYSQNGYGKEAIEMYKQMKEKNLG 309

Query: 121 TNEVALVGALSACVQLGDVEMASKLIDQVDEGCCDRTLFVSNALIHKHSKFGNIERAQEE 180
           TNEVALVGALSACVQLGDVEMASKLIDQVDEGCCDRTLFVSNALIHKHSKFGNIERAQEE
Sbjct: 310 TNEVALVGALSACVQLGDVEMASKLIDQVDEGCCDRTLFVSNALIHKHSKFGNIERAQEE 369

Query: 181 FNRMKDRDVVTYSTLIIALADHGKAKEALDLFSKMEEEGIKPNQICFIGVLNACAHAGLI 240
           FNRMKDRDVVTYSTLIIALADHGKAKEALDLFSKMEEEGIKPNQICFIGVLNACAHAGLI
Sbjct: 370 FNRMKDRDVVTYSTLIIALADHGKAKEALDLFSKMEEEGIKPNQICFIGVLNACAHAGLI 429

Query: 241 EQGCKYFELMRKGFGIEPQKGHYACMVDLLGRAGEVEMAYNVIKGAREIDAKTWGSLLGA 300
           EQGCKYFELMRKGFGIEPQKGHYACMVDLLGRAGEVEMAYNVIKGAREIDAKTWGSLLGA
Sbjct: 430 EQGCKYFELMRKGFGIEPQKGHYACMVDLLGRAGEVEMAYNVIKGAREIDAKTWGSLLGA 489

Query: 301 CKIHGNLEVGEIAAKHLFEMEPENTGNYVLLANTYAQMKEWNEAEKVRNVMVERGIKKFP 360
           CKIHGNLEVGEIAAKHLFEMEPENTGNYVLLANTYAQMKEWNEAEKVRNVMVERGIKKFP
Sbjct: 490 CKIHGNLEVGEIAAKHLFEMEPENTGNYVLLANTYAQMKEWNEAEKVRNVMVERGIKKFP 549

Query: 361 GYSWVSRSS 370
           GYSWVSRSS
Sbjct: 550 GYSWVSRSS 558

[Close]
BLAST of CSPI03G41070 vs. TrEMBL
Match: A0A061GBJ3_THECC (Tetratricopeptide-like helical, putative OS=Theobroma cacao GN=TCM_029111 PE=4 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 6.4e-134
Identity = 230/367 (62.67%), Postives = 292/367 (79.56%), Query Frame = 1 

Query: 1   MIRGYSKLGMMDDAQDLFDKMGQRNSFSWTTMVAGYANWGNMKAAKQLYDAMPEKNPVSQ 60
           MI GY+K+G+MD+A  LFD M +RN  SWT MVAGYA++G+M AAK+ YD M EKN V+ 
Sbjct: 187 MICGYTKVGLMDEAWCLFDAMEERNVVSWTAMVAGYADYGDMGAAKEFYDRMVEKNSVAW 246

Query: 61  LAMIAGYGRCGDVAEAERIFGEILVPDSSCCAAMVACYSQNGYGKEAIEMYKQMKEKNLG 120
           LAMIAGYG+CG+V+EA R+F E + PD+SC AAMVACY+QNGY KEAIEMY  M+++++ 
Sbjct: 247 LAMIAGYGKCGNVSEARRVFDETVKPDASCWAAMVACYAQNGYAKEAIEMYVLMRDQSVR 306

Query: 121 TNEVALVGALSACVQLGDVEMASKLIDQVDEGCCDRTLFVSNALIHKHSKFGNIERAQEE 180
             +VA+VGALSAC Q GDV+MA  L   ++EGCCDRTLFVSNALIH H+KFG +E+A  E
Sbjct: 307 ITDVAIVGALSACTQFGDVKMAEALAKNIEEGCCDRTLFVSNALIHMHAKFGCMEQAWME 366

Query: 181 FNRMKDRDVVTYSTLIIALADHGKAKEALDLFSKMEEEGIKPNQICFIGVLNACAHAGLI 240
           F+RMK+RDVV+YST+I AL+DHG+ +EAL LFSKM++EGIKPNQ+ FIGVLNAC+H GL+
Sbjct: 367 FSRMKERDVVSYSTMIAALSDHGQFQEALVLFSKMQKEGIKPNQVTFIGVLNACSHGGLV 426

Query: 241 EQGCKYFELMRKGFGIEPQKGHYACMVDLLGRAGEVEMAYN-VIKGAREIDAKTWGSLLG 300
           E+GCK FELM +   I P   H  C+VDLLGRAG +E AYN +I+     DA  WG+LLG
Sbjct: 427 EEGCKLFELMTQILKIVPLSEHLTCVVDLLGRAGHLEKAYNLIIEYGDASDAGIWGALLG 486

Query: 301 ACKIHGNLEVGEIAAKHLFEMEPENTGNYVLLANTYAQMKEWNEAEKVRNVMVERGIKKF 360
           AC+++GN E+GEIAA HLFE+EPEN GNYVLLAN YA + +W +AE++R V+ E+  +K 
Sbjct: 487 ACRVYGNAELGEIAASHLFEIEPENVGNYVLLANIYASLNKWEDAERLRKVISEKEKRKS 546

Query: 361 PGYSWVS 367
           PG SWVS
Sbjct: 547 PGCSWVS 553

[Close]
BLAST of CSPI03G41070 vs. TrEMBL
Match: A0A0B0MBH4_GOSAR (Putative pentatricopeptide repeat-containing-like protein OS=Gossypium arboreum GN=F383_19874 PE=4 SV=1)

HSP 1 Score: 477.6 bits (1228), Expect = 1.3e-131
Identity = 228/366 (62.30%), Postives = 286/366 (78.14%), Query Frame = 1 

Query: 1   MIRGYSKLGMMDDAQDLFDKMGQRNSFSWTTMVAGYANWGNMKAAKQLYDAMPEKNPVSQ 60
           MI GY+K+G+MD A+ LFD M  RN  SWTTMVAGYAN+G+M+AAK LYD M EKN V+ 
Sbjct: 82  MICGYTKVGLMDKARFLFDDMEGRNMVSWTTMVAGYANYGDMEAAKDLYDRMMEKNSVAW 141

Query: 61  LAMIAGYGRCGDVAEAERIFGEILVPDSSCCAAMVACYSQNGYGKEAIEMYKQMKEKNLG 120
           LAMIAGYG+CGDV++A RIF  I+ PD+SC AAM+ACY+QNGY KEAIE+Y+ M+ +N+ 
Sbjct: 142 LAMIAGYGKCGDVSKARRIFDGIVKPDASCWAAMLACYAQNGYAKEAIEIYRAMRGQNVR 201

Query: 121 TNEVALVGALSACVQLGDVEMASKLIDQVDEGCCDRTLFVSNALIHKHSKFGNIERAQEE 180
             EV +VG +SAC Q+GDV MA  L  +++EGCC RTLFVSNALI+ H++ G +E+A  E
Sbjct: 202 ITEVGMVGVISACTQIGDVSMAEALAKELEEGCCGRTLFVSNALINMHARCGCMEQAWME 261

Query: 181 FNRMKDRDVVTYSTLIIALADHGKAKEALDLFSKMEEEGIKPNQICFIGVLNACAHAGLI 240
           F RMK RDVV+YST+I ALADHG+ + AL LFSKM +EGIKPNQ+ FIGVLNAC+H GL+
Sbjct: 262 FCRMKQRDVVSYSTMITALADHGECQVALALFSKMHKEGIKPNQVTFIGVLNACSHGGLV 321

Query: 241 EQGCKYFELMRKGFGIEPQKGHYACMVDLLGRAGEVEMAYN-VIKGAREIDAKTWGSLLG 300
           E+GCK FELM   FGI P   H  CMVDLLGRAG +E AYN +I+     DA  WG+LLG
Sbjct: 322 EEGCKLFELMTVVFGIVPLSQHLTCMVDLLGRAGHLEKAYNLIIEYGDAWDAGIWGALLG 381

Query: 301 ACKIHGNLEVGEIAAKHLFEMEPENTGNYVLLANTYAQMKEWNEAEKVRNVMVERGIKKF 360
           ACK++GN  +GEIA+ HLFE+EPEN GNYVLLAN YA + +W +AEK++ ++ E+G +K 
Sbjct: 382 ACKVYGNAALGEIASNHLFEIEPENAGNYVLLANIYASLNKWEDAEKLKKMISEKGKRKS 441

Query: 361 PGYSWV 366
           PG SWV
Sbjct: 442 PGCSWV 447

[Close]
BLAST of CSPI03G41070 vs. TrEMBL
Match: V4RY09_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10025313mg PE=4 SV=1)

HSP 1 Score: 477.6 bits (1228), Expect = 1.3e-131
Identity = 224/367 (61.04%), Postives = 287/367 (78.20%), Query Frame = 1 

Query: 1   MIRGYSKLGMMDDAQDLFDKMGQRNSFSWTTMVAGYANWGNMKAAKQLYDAMPEKNPVSQ 60
           +I GY+K+G+MDDAQ LFD M +RN  SW+ MVAGYAN GNMKAAK+ YD M EKN V+ 
Sbjct: 123 VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTW 182

Query: 61  LAMIAGYGRCGDVAEAERIFGEILVPDSSCCAAMVACYSQNGYGKEAIEMYKQMKEKNLG 120
           +AMIAGYG+CG+V EA+++F EI  PD+SC AAM  CY QNGY K AIEMYK M+E+N+ 
Sbjct: 183 VAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKAMREENVR 242

Query: 121 TNEVALVGALSACVQLGDVEMASKLIDQVDEGCCDRTLFVSNALIHKHSKFGNIERAQEE 180
            +EVA+VGA+SAC QLGDVEMA+ L   VDEGCCDRT +VSNALIH HSK G ++ A  E
Sbjct: 243 ISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWRE 302

Query: 181 FNRMKDRDVVTYSTLIIALADHGKAKEALDLFSKMEEEGIKPNQICFIGVLNACAHAGLI 240
           F+R+K++DV++YS++I A ADHGK++EALD+F KM  EGI+PNQ+ FIGVL+AC+H GL+
Sbjct: 303 FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLSACSHGGLV 362

Query: 241 EQGCKYFELMRKGFGIEPQKGHYACMVDLLGRAGEVEMAYNVIKGAREI-DAKTWGSLLG 300
           E GCK FELM + FGI+P   H  CMVDLLGR+G++E A+++I   ++  DA TWG+LLG
Sbjct: 363 EDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLG 422

Query: 301 ACKIHGNLEVGEIAAKHLFEMEPENTGNYVLLANTYAQMKEWNEAEKVRNVMVERGIKKF 360
           ACK+H N E+GEIAA+HL E+ PE TGN  LLAN YA M +W ++E V+ ++ E   KK 
Sbjct: 423 ACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKS 482

Query: 361 PGYSWVS 367
           PG SW+S
Sbjct: 483 PGCSWIS 489

[Close]
BLAST of CSPI03G41070 vs. TrEMBL
Match: V4SH02_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10025313mg PE=4 SV=1)

HSP 1 Score: 477.6 bits (1228), Expect = 1.3e-131
Identity = 224/367 (61.04%), Postives = 287/367 (78.20%), Query Frame = 1 

Query: 1   MIRGYSKLGMMDDAQDLFDKMGQRNSFSWTTMVAGYANWGNMKAAKQLYDAMPEKNPVSQ 60
           +I GY+K+G+MDDAQ LFD M +RN  SW+ MVAGYAN GNMKAAK+ YD M EKN V+ 
Sbjct: 177 VICGYTKIGLMDDAQRLFDSMAERNVISWSAMVAGYANCGNMKAAKEFYDRMTEKNSVTW 236

Query: 61  LAMIAGYGRCGDVAEAERIFGEILVPDSSCCAAMVACYSQNGYGKEAIEMYKQMKEKNLG 120
           +AMIAGYG+CG+V EA+++F EI  PD+SC AAM  CY QNGY K AIEMYK M+E+N+ 
Sbjct: 237 VAMIAGYGKCGEVREAKKVFDEISEPDASCWAAMTVCYVQNGYAKAAIEMYKAMREENVR 296

Query: 121 TNEVALVGALSACVQLGDVEMASKLIDQVDEGCCDRTLFVSNALIHKHSKFGNIERAQEE 180
            +EVA+VGA+SAC QLGDVEMA+ L   VDEGCCDRT +VSNALIH HSK G ++ A  E
Sbjct: 297 ISEVAMVGAISACTQLGDVEMAAILAKHVDEGCCDRTNYVSNALIHMHSKCGYLDLAWRE 356

Query: 181 FNRMKDRDVVTYSTLIIALADHGKAKEALDLFSKMEEEGIKPNQICFIGVLNACAHAGLI 240
           F+R+K++DV++YS++I A ADHGK++EALD+F KM  EGI+PNQ+ FIGVL+AC+H GL+
Sbjct: 357 FSRIKNKDVISYSSMITAFADHGKSQEALDMFLKMRNEGIEPNQVTFIGVLSACSHGGLV 416

Query: 241 EQGCKYFELMRKGFGIEPQKGHYACMVDLLGRAGEVEMAYNVIKGAREI-DAKTWGSLLG 300
           E GCK FELM + FGI+P   H  CMVDLLGR+G++E A+++I   ++  DA TWG+LLG
Sbjct: 417 EDGCKQFELMTRVFGIKPLTEHLTCMVDLLGRSGQLEKAHSLIMDYKDFCDAGTWGALLG 476

Query: 301 ACKIHGNLEVGEIAAKHLFEMEPENTGNYVLLANTYAQMKEWNEAEKVRNVMVERGIKKF 360
           ACK+H N E+GEIAA+HL E+ PE TGN  LLAN YA M +W ++E V+ ++ E   KK 
Sbjct: 477 ACKVHVNAELGEIAARHLLELGPEKTGNSALLANIYASMGKWKDSEIVKMMISETEKKKS 536

Query: 361 PGYSWVS 367
           PG SW+S
Sbjct: 537 PGCSWIS 543

[Close]
BLAST of CSPI03G41070 vs. TAIR10
Match: AT4G02750.1 (AT4G02750.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 322.0 bits (824), Expect = 4.8e-88
Identity = 154/366 (42.08%), Postives = 234/366 (63.93%), Query Frame = 1 

Query: 1   MIRGYSKLGMMDDAQDLFDKMGQRNSFSWTTMVAGYANWGNMKAAKQLYDAMPEKNPVSQ 60
           M+ GY +  M+++A++LFDKM +RN  SW  M+AGY     M+ AK+L+D MP +N  + 
Sbjct: 287 MVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTW 346

Query: 61  LAMIAGYGRCGDVAEAERIFGEILVPDSSCCAAMVACYSQNGYGKEAIEMYKQMKEKNLG 120
             MI GY +CG ++EA+ +F ++   D    AAM+A YSQ+G+  EA+ ++ QM+ +   
Sbjct: 347 NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGR 406

Query: 121 TNEVALVGALSACVQLGDVEMASKLIDQVDEGCCDRTLFVSNALIHKHSKFGNIERAQEE 180
            N  +   ALS C  +  +E+  +L  ++ +G  +   FV NAL+  + K G+IE A + 
Sbjct: 407 LNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDL 466

Query: 181 FNRMKDRDVVTYSTLIIALADHGKAKEALDLFSKMEEEGIKPNQICFIGVLNACAHAGLI 240
           F  M  +D+V+++T+I   + HG  + AL  F  M+ EG+KP+    + VL+AC+H GL+
Sbjct: 467 FKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLV 526

Query: 241 EQGCKYFELMRKGFGIEPQKGHYACMVDLLGRAGEVEMAYNVIKGAR-EIDAKTWGSLLG 300
           ++G +YF  M + +G+ P   HYACMVDLLGRAG +E A+N++K    E DA  WG+LLG
Sbjct: 527 DKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLG 586

Query: 301 ACKIHGNLEVGEIAAKHLFEMEPENTGNYVLLANTYAQMKEWNEAEKVRNVMVERGIKKF 360
           A ++HGN E+ E AA  +F MEPEN+G YVLL+N YA    W +  K+R  M ++G+KK 
Sbjct: 587 ASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKV 646

Query: 361 PGYSWV 366
           PGYSW+
Sbjct: 647 PGYSWI 652

[Close]
BLAST of CSPI03G41070 vs. TAIR10
Match: AT5G37570.1 (AT5G37570.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 300.1 bits (767), Expect = 1.9e-81
Identity = 145/369 (39.30%), Postives = 229/369 (62.06%), Query Frame = 1 

Query: 1   MIRGYSKLGMMDDAQDLFDKMGQRNSFSWTTMVAGYANWGNMKAAKQLYDAMPEKNPVSQ 60
           ++  Y K G +++A+ +FD M +RN  SW  +V G    G++  AK+L+D MP+++ +S 
Sbjct: 182 LVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISY 241

Query: 61  LAMIAGYGRCGDVAEAERIFGEILVPDSSCCAAMVACYSQNGYGKEAIEMYKQMKEKNLG 120
            +MI GY + GD+  A  +F E    D    +A++  Y+QNG   EA +++ +M  KN+ 
Sbjct: 242 TSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVK 301

Query: 121 TNEVALVGALSACVQLGDVEMASKLIDQVDEGCCD-RTLFVSNALIHKHSKFGNIERAQE 180
            +E  +VG +SAC Q+G  E+  K+   + +      + +V  ALI  ++K G+++RA +
Sbjct: 302 PDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAK 361

Query: 181 EFNRMKDRDVVTYSTLIIALADHGKAKEALDLFSKMEEEGIKPNQICFIGVLNACAHAGL 240
            F  M  RD+V+Y +++  +A HG   EA+ LF KM +EGI P+++ F  +L  C  + L
Sbjct: 362 LFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRL 421

Query: 241 IEQGCKYFELMRKGFGIEPQKGHYACMVDLLGRAGEVEMAYNVIKGAR-EIDAKTWGSLL 300
           +E+G +YFELMRK + I     HY+C+V+LL R G+++ AY +IK    E  A  WGSLL
Sbjct: 422 VEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLL 481

Query: 301 GACKIHGNLEVGEIAAKHLFEMEPENTGNYVLLANTYAQMKEWNEAEKVRNVMVERGIKK 360
           G C +HGN E+ E+ A+HLFE+EP++ G+YVLL+N YA +  W +   +R+ M E GI K
Sbjct: 482 GGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITK 541

Query: 361 FPGYSWVSR 368
             G SW+SR
Sbjct: 542 ICGRSWISR 550

[Close]
BLAST of CSPI03G41070 vs. TAIR10
Match: AT5G44230.1 (AT5G44230.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 282.7 bits (722), Expect = 3.2e-76
Identity = 144/369 (39.02%), Postives = 221/369 (59.89%), Query Frame = 1 

Query: 1   MIRGYSKLGMMDDAQDLFDKMGQRNSFSWTTMVAGYANWGNMKAAKQLYDAMPEKNPVSQ 60
           MI  Y K   +D A+ +FD+M +R+  SWT ++A YA  GNM+ A +L++++P K+ V+ 
Sbjct: 190 MIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAW 249

Query: 61  LAMIAGYGRCGDVAEAERIFGEILVPDSSCCAAMVACYSQNGYGKEAIEMYKQMKEKNLG 120
            AM+ G+                               +QN   +EA+E + +M++  + 
Sbjct: 250 TAMVTGF-------------------------------AQNAKPQEALEYFDRMEKSGIR 309

Query: 121 TNEVALVGALSACVQLGDVEMASKLIDQVDEGCCDRT--LFVSNALIHKHSKFGNIERAQ 180
            +EV + G +SAC QLG  + A + +    +     +  + + +ALI  +SK GN+E A 
Sbjct: 310 ADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAV 369

Query: 181 EEFNRMKDRDVVTYSTLIIALADHGKAKEALDLFSKM-EEEGIKPNQICFIGVLNACAHA 240
             F  M +++V TYS++I+ LA HG+A+EAL LF  M  +  IKPN + F+G L AC+H+
Sbjct: 370 NVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHS 429

Query: 241 GLIEQGCKYFELMRKGFGIEPQKGHYACMVDLLGRAGEVEMAYNVIKGAR-EIDAKTWGS 300
           GL++QG + F+ M + FG++P + HY CMVDLLGR G ++ A  +IK    E     WG+
Sbjct: 430 GLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGA 489

Query: 301 LLGACKIHGNLEVGEIAAKHLFEMEPENTGNYVLLANTYAQMKEWNEAEKVRNVMVERGI 360
           LLGAC+IH N E+ EIAA+HLFE+EP+  GNY+LL+N YA   +W    +VR ++ E+G+
Sbjct: 490 LLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGL 527

Query: 361 KKFPGYSWV 366
           KK P  SWV
Sbjct: 550 KKTPAVSWV 527

[Close]
BLAST of CSPI03G41070 vs. TAIR10
Match: AT1G09410.1 (AT1G09410.1 pentatricopeptide (PPR) repeat-containing protein)

HSP 1 Score: 276.2 bits (705), Expect = 3.0e-74
Identity = 130/366 (35.52%), Postives = 221/366 (60.38%), Query Frame = 1 

Query: 1   MIRGYSKLGMMDDAQDLFDKMGQRNSFSWTTMVAGYANWGNMKAAKQLYDAMPEKNPVSQ 60
           M+ GY +   +DDA+ +FD M ++   SWT+M+ GY   G ++ A++L++ MP K  ++ 
Sbjct: 209 MVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIAC 268

Query: 61  LAMIAGYGRCGDVAEAERIFGEILVPDSSCCAAMVACYSQNGYGKEAIEMYKQMKEKNLG 120
            AMI+G G+ G++A+A R+F  +   + +    ++  + +NG+  EA++++  M+++ + 
Sbjct: 269 NAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVR 328

Query: 121 TNEVALVGALSACVQLGDVEMASKLIDQVDEGCCDRTLFVSNALIHKHSKFGNIERAQEE 180
                L+  LS C  L  +    ++  Q+     D  ++V++ L+  + K G + +++  
Sbjct: 329 PTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLI 388

Query: 181 FNRMKDRDVVTYSTLIIALADHGKAKEALDLFSKMEEEG-IKPNQICFIGVLNACAHAGL 240
           F+R   +D++ ++++I   A HG  +EAL +F +M   G  KPN++ F+  L+AC++AG+
Sbjct: 389 FDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGM 448

Query: 241 IEQGCKYFELMRKGFGIEPQKGHYACMVDLLGRAGEVEMAYNVIKGAR-EIDAKTWGSLL 300
           +E+G K +E M   FG++P   HYACMVD+LGRAG    A  +I     E DA  WGSLL
Sbjct: 449 VEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLL 508

Query: 301 GACKIHGNLEVGEIAAKHLFEMEPENTGNYVLLANTYAQMKEWNEAEKVRNVMVERGIKK 360
           GAC+ H  L+V E  AK L E+EPEN+G Y+LL+N YA    W +  ++R +M  R ++K
Sbjct: 509 GACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRK 568

Query: 361 FPGYSW 365
            PG SW
Sbjct: 569 SPGCSW 574

[Close]
BLAST of CSPI03G41070 vs. TAIR10
Match: AT1G56690.1 (AT1G56690.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 271.2 bits (692), Expect = 9.7e-73
Identity = 127/366 (34.70%), Postives = 218/366 (59.56%), Query Frame = 1 

Query: 1   MIRGYSKLGMMDDAQDLFDKMGQRNSFSWTTMVAGYANWGNMKAAKQLYDAMPEKNPVSQ 60
           MI GY +   +D A+ LF+ M ++   SWT+M+ GY   G ++ A++ ++ MP K  ++ 
Sbjct: 209 MITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIAC 268

Query: 61  LAMIAGYGRCGDVAEAERIFGEILVPDSSCCAAMVACYSQNGYGKEAIEMYKQMKEKNLG 120
            AMI G+G  G++++A R+F  +   D++    M+  Y + G+  EA++++ QM+++ + 
Sbjct: 269 NAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVR 328

Query: 121 TNEVALVGALSACVQLGDVEMASKLIDQVDEGCCDRTLFVSNALIHKHSKFGNIERAQEE 180
            +  +L+  LS C  L  ++   ++   +     D  ++V++ L+  + K G + +A+  
Sbjct: 329 PSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLV 388

Query: 181 FNRMKDRDVVTYSTLIIALADHGKAKEALDLFSKMEEEGIKPNQICFIGVLNACAHAGLI 240
           F+R   +D++ ++++I   A HG  +EAL +F +M   G  PN++  I +L AC++AG +
Sbjct: 389 FDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKL 448

Query: 241 EQGCKYFELMRKGFGIEPQKGHYACMVDLLGRAGEVEMAYNVIKGAR-EIDAKTWGSLLG 300
           E+G + FE M   F + P   HY+C VD+LGRAG+V+ A  +I+    + DA  WG+LLG
Sbjct: 449 EEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLG 508

Query: 301 ACKIHGNLEVGEIAAKHLFEMEPENTGNYVLLANTYAQMKEWNEAEKVRNVMVERGIKKF 360
           ACK H  L++ E+AAK LFE EP+N G YVLL++  A   +W +   VR  M    + KF
Sbjct: 509 ACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKF 568

Query: 361 PGYSWV 366
           PG SW+
Sbjct: 569 PGCSWI 574

[Close]
BLAST of CSPI03G41070 vs. NCBI nr
Match: gi|778686134|ref|XP_004141212.2| (PREDICTED: putative pentatricopeptide repeat-containing protein At5g37570 [Cucumis sativus])

HSP 1 Score: 760.4 bits (1962), Expect = 1.5e-216
Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 1 

Query: 1   MIRGYSKLGMMDDAQDLFDKMGQRNSFSWTTMVAGYANWGNMKAAKQLYDAMPEKNPVSQ 60
           MIRGYSKLGMMDDAQDLFDKMGQRNSFSWTTMVAGYANWGNMKAAKQLYDAMPEKNPVSQ
Sbjct: 190 MIRGYSKLGMMDDAQDLFDKMGQRNSFSWTTMVAGYANWGNMKAAKQLYDAMPEKNPVSQ 249

Query: 61  LAMIAGYGRCGDVAEAERIFGEILVPDSSCCAAMVACYSQNGYGKEAIEMYKQMKEKNLG 120
           LAMIAGYGRCGDVAEAERIFGEILVPDSSCCAAMVACYSQNGYGKEAIEMYKQMKEKNLG
Sbjct: 250 LAMIAGYGRCGDVAEAERIFGEILVPDSSCCAAMVACYSQNGYGKEAIEMYKQMKEKNLG 309

Query: 121 TNEVALVGALSACVQLGDVEMASKLIDQVDEGCCDRTLFVSNALIHKHSKFGNIERAQEE 180
           TNEVALVGALSACVQLGDVEMASKLIDQVDEGCCDRTLFVSNALIHKHSKFGNIERAQEE
Sbjct: 310 TNEVALVGALSACVQLGDVEMASKLIDQVDEGCCDRTLFVSNALIHKHSKFGNIERAQEE 369

Query: 181 FNRMKDRDVVTYSTLIIALADHGKAKEALDLFSKMEEEGIKPNQICFIGVLNACAHAGLI 240
           FNRMKDRDVVTYSTLIIALADHGKAKEALDLFSKMEEEGIKPNQICFIGVLNACAHAGLI
Sbjct: 370 FNRMKDRDVVTYSTLIIALADHGKAKEALDLFSKMEEEGIKPNQICFIGVLNACAHAGLI 429

Query: 241 EQGCKYFELMRKGFGIEPQKGHYACMVDLLGRAGEVEMAYNVIKGAREIDAKTWGSLLGA 300
           EQGCKYFELMRKGFGIEPQKGHYACMVDLLGRAGEVEMAYNVIKGAREIDAKTWGSLLGA
Sbjct: 430 EQGCKYFELMRKGFGIEPQKGHYACMVDLLGRAGEVEMAYNVIKGAREIDAKTWGSLLGA 489

Query: 301 CKIHGNLEVGEIAAKHLFEMEPENTGNYVLLANTYAQMKEWNEAEKVRNVMVERGIKKFP 360
           CKIHGNLEVGEIAAKHLFEMEPENTGNYVLLANTYAQMKEWNEAEKVRNVMVERGIKKFP
Sbjct: 490 CKIHGNLEVGEIAAKHLFEMEPENTGNYVLLANTYAQMKEWNEAEKVRNVMVERGIKKFP 549

Query: 361 GYSWVSRSS 370
           GYSWVSRSS
Sbjct: 550 GYSWVSRSS 558

[Close]
BLAST of CSPI03G41070 vs. NCBI nr
Match: gi|659128013|ref|XP_008464004.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At5g37570 [Cucumis melo])

HSP 1 Score: 724.2 bits (1868), Expect = 1.2e-205
Identity = 350/369 (94.85%), Postives = 360/369 (97.56%), Query Frame = 1 

Query: 1   MIRGYSKLGMMDDAQDLFDKMGQRNSFSWTTMVAGYANWGNMKAAKQLYDAMPEKNPVSQ 60
           MIRGYSKLGMMDDAQ+LFDKM +RNSFSWTTMVAGYAN GNMKAAK LYDAM EKNPVSQ
Sbjct: 195 MIRGYSKLGMMDDAQELFDKMEERNSFSWTTMVAGYANCGNMKAAKLLYDAMIEKNPVSQ 254

Query: 61  LAMIAGYGRCGDVAEAERIFGEILVPDSSCCAAMVACYSQNGYGKEAIEMYKQMKEKNLG 120
           LAMIAGYGRCGDVAEAERIFG ILVPDSSCCAAMVACYSQNGY KEAI+MYKQMKE+NLG
Sbjct: 255 LAMIAGYGRCGDVAEAERIFGGILVPDSSCCAAMVACYSQNGYAKEAIDMYKQMKEENLG 314

Query: 121 TNEVALVGALSACVQLGDVEMASKLIDQVDEGCCDRTLFVSNALIHKHSKFGNIERAQEE 180
           TNEVA+VGA+SACVQLGDVEMASKLIDQVDEGCCDRTLFVSNALIHKHSKFGNIE+AQEE
Sbjct: 315 TNEVAIVGAISACVQLGDVEMASKLIDQVDEGCCDRTLFVSNALIHKHSKFGNIEKAQEE 374

Query: 181 FNRMKDRDVVTYSTLIIALADHGKAKEALDLFSKMEEEGIKPNQICFIGVLNACAHAGLI 240
           FNRMKDRDVVTYSTLIIALADHGKAKEALDLFSKMEEEGIKPNQICFIG LNACAHAGLI
Sbjct: 375 FNRMKDRDVVTYSTLIIALADHGKAKEALDLFSKMEEEGIKPNQICFIGALNACAHAGLI 434

Query: 241 EQGCKYFELMRKGFGIEPQKGHYACMVDLLGRAGEVEMAYNVIKGAREIDAKTWGSLLGA 300
           EQGCKYFELMRKGFGIEPQKGHYACMVDLLGRAGEVEMAYN+IKGAREIDAKTWGSLLGA
Sbjct: 435 EQGCKYFELMRKGFGIEPQKGHYACMVDLLGRAGEVEMAYNIIKGAREIDAKTWGSLLGA 494

Query: 301 CKIHGNLEVGEIAAKHLFEMEPENTGNYVLLANTYAQMKEWNEAEKVRNVMVERGIKKFP 360
           CKIHGNLEVGEIAAKHLFEMEPENTGNYVLLANTYAQMKEWNEAEKVR +MVERGI+KFP
Sbjct: 495 CKIHGNLEVGEIAAKHLFEMEPENTGNYVLLANTYAQMKEWNEAEKVRKMMVERGIRKFP 554

Query: 361 GYSWVSRSS 370
           GY WVSRSS
Sbjct: 555 GYCWVSRSS 563

[Close]
BLAST of CSPI03G41070 vs. NCBI nr
Match: gi|1009111944|ref|XP_015865825.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At5g37570 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 525.4 bits (1352), Expect = 8.0e-146
Identity = 249/366 (68.03%), Postives = 304/366 (83.06%), Query Frame = 1 

Query: 1   MIRGYSKLGMMDDAQDLFDKMGQRNSFSWTTMVAGYANWGNMKAAKQLYDAMPEKNPVSQ 60
           MI GY+K+GMMDDA+ LFD MG RN+ SWTTMVAGYAN G+MKAAK+LY+ M EKN V  
Sbjct: 197 MIYGYTKMGMMDDARWLFDNMGTRNAISWTTMVAGYANKGDMKAAKELYELMTEKNSVLC 256

Query: 61  LAMIAGYGRCGDVAEAERIFGEILVPDSSCCAAMVACYSQNGYGKEAIEMYKQMKEKNLG 120
           +AMIAGYG+CG+V EA  +F E+   D+SC AAMV CY+QNGY KEAIE Y++M+++N+ 
Sbjct: 257 VAMIAGYGKCGNVEEARMVFDEVPEHDASCWAAMVVCYAQNGYAKEAIETYEKMRKENIA 316

Query: 121 TNEVALVGALSACVQLGDVEMASKLIDQVDEGCCDRTLFVSNALIHKHSKFGNIERAQEE 180
            NEVA+VGALSAC+QLGDVEMA+KL   VDEGCC+RTL VSNALIH HS  GN+++A++E
Sbjct: 317 VNEVAIVGALSACIQLGDVEMATKLAKHVDEGCCERTLVVSNALIHMHSTCGNLDQARKE 376

Query: 181 FNRMKDRDVVTYSTLIIALADHGKAKEALDLFSKMEEEGIKPNQICFIGVLNACAHAGLI 240
           F+RM  RDV++Y+TLIIALADHGKAKEAL+LFSKM  E I PNQ+ FIGVLNAC+HAG+I
Sbjct: 377 FDRMSYRDVISYTTLIIALADHGKAKEALELFSKMHREEIAPNQVTFIGVLNACSHAGMI 436

Query: 241 EQGCKYFELMRKGFGIEPQKGHYACMVDLLGRAGEVEMAYNVI-KGAREIDAKTWGSLLG 300
           E+GC+YFELM   FGIEP   HYACMVDLLGRAG VE AYN+I +     DAK WGSLL 
Sbjct: 437 EEGCRYFELMIHVFGIEPLNEHYACMVDLLGRAGLVEKAYNLIMENEDAADAKLWGSLLA 496

Query: 301 ACKIHGNLEVGEIAAKHLFEMEPENTGNYVLLANTYAQMKEWNEAEKVRNVMVERGIKKF 360
           ACK+HGN E+GEIAA HLF++EPENTGNYVLLA+ YA+M +W++A++VR +M ERGI+K 
Sbjct: 497 ACKVHGNAELGEIAAMHLFKIEPENTGNYVLLASIYAEMNKWDDAKRVRKMMSERGIRKS 556

Query: 361 PGYSWV 366
           PG SW+
Sbjct: 557 PGRSWI 562

[Close]
BLAST of CSPI03G41070 vs. NCBI nr
Match: gi|1009111946|ref|XP_015865829.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At5g37570 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 510.8 bits (1314), Expect = 2.1e-141
Identity = 246/366 (67.21%), Postives = 301/366 (82.24%), Query Frame = 1 

Query: 1   MIRGYSKLGMMDDAQDLFDKMGQRNSFSWTTMVAGYANWGNMKAAKQLYDAMPEKNPVSQ 60
           MI GY+K+GMMDDA+ LFD MG RN+ SWTTMVAGYAN G+MKAAK+LY+ M EKN V  
Sbjct: 197 MIYGYTKMGMMDDARWLFDNMGTRNAISWTTMVAGYANKGDMKAAKELYELMTEKNSVLC 256

Query: 61  LAMIAGYGRCGDVAEAERIFGEILVPDSSCCAAMVACYSQNGYGKEAIEMYKQMKEKNLG 120
           +AMIAGYG+CG+V EA  +F E+   D+SC AAMV CY+QNGY KEAIE Y++M+++N+ 
Sbjct: 257 VAMIAGYGKCGNVEEARMVFDEVPEHDASCWAAMVVCYAQNGYAKEAIETYEKMRKENIA 316

Query: 121 TNEVALVGALSACVQLGDVEMASKLIDQVDEGCCDRTLFVSNALIHKHSKFGNIERAQEE 180
            NEVA+VGALSAC+QLGDVEMA+KL   VDE   +RTL VSNALIH HS  GN+++A++E
Sbjct: 317 VNEVAIVGALSACIQLGDVEMATKLAKHVDE---ERTLVVSNALIHMHSTCGNLDQARKE 376

Query: 181 FNRMKDRDVVTYSTLIIALADHGKAKEALDLFSKMEEEGIKPNQICFIGVLNACAHAGLI 240
           F+RM  RDV++Y+TLIIALADHGKAKEAL+LFSKM  E I PNQ+ FIGVLNAC+HAG+I
Sbjct: 377 FDRMSYRDVISYTTLIIALADHGKAKEALELFSKMHREEIAPNQVTFIGVLNACSHAGMI 436

Query: 241 EQGCKYFELMRKGFGIEPQKGHYACMVDLLGRAGEVEMAYNVI-KGAREIDAKTWGSLLG 300
           E+GC+YFELM   FGIEP   HYACMVDLLGRAG VE AYN+I +     DAK WGSLL 
Sbjct: 437 EEGCRYFELMIHVFGIEPLNEHYACMVDLLGRAGLVEKAYNLIMENEDAADAKLWGSLLA 496

Query: 301 ACKIHGNLEVGEIAAKHLFEMEPENTGNYVLLANTYAQMKEWNEAEKVRNVMVERGIKKF 360
           ACK+HGN E+GEIAA HLF++EPENTGNYVLLA+ YA+M +W++A++VR +M ERGI+K 
Sbjct: 497 ACKVHGNAELGEIAAMHLFKIEPENTGNYVLLASIYAEMNKWDDAKRVRKMMSERGIRKS 556

Query: 361 PGYSWV 366
           PG SW+
Sbjct: 557 PGRSWI 559

[Close]
BLAST of CSPI03G41070 vs. NCBI nr
Match: gi|645243951|ref|XP_008228213.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At5g37570 [Prunus mume])

HSP 1 Score: 503.8 bits (1296), Expect = 2.5e-139
Identity = 235/368 (63.86%), Postives = 303/368 (82.34%), Query Frame = 1 

Query: 1   MIRGYSKLGMMDDAQDLFDKMGQRNSFSWTTMVAGYANWGNMKAAKQLYDAMPEKNPVSQ 60
           M+ GYSK+G+M +A+ LFD M QRN+ SWTTMVAGYAN G+M+ AK+LY+ M EK+ V+ 
Sbjct: 196 MVCGYSKMGLMGEARWLFDNMEQRNAVSWTTMVAGYANNGDMETAKELYEKMVEKDSVAW 255

Query: 61  LAMIAGYGRCGDVAEAERIFGEILVPDSSCCAAMVACYSQNGYGKEAIEMYKQMKEKNLG 120
           +AMIAGYG+CG+V EA+ +F E  + D+SC AAMVACY+QNGY KEAIEMYK+M+E+ + 
Sbjct: 256 VAMIAGYGKCGNVLEAKIVFEETQMADASCWAAMVACYAQNGYAKEAIEMYKKMREEKVT 315

Query: 121 TNEVALVGALSACVQLGDVEMASKLIDQVDEGCCDRTLFVSNALIHKHSKFGNIERAQEE 180
            NEVA+VGA+SAC QLGD E+A+ L   V+EGCC+RTLFVSNALIH HSK G+IE+A  E
Sbjct: 316 VNEVAMVGAISACTQLGDNEVAATLAKHVEEGCCERTLFVSNALIHMHSKCGDIEQAWRE 375

Query: 181 FNRMKDRDVVTYSTLIIALADHGKAKEALDLFSKMEEEGIKPNQICFIGVLNACAHAGLI 240
           FNRM  RDV++YS LI ALADHGKA++A++LFS+M++EGI+PNQ+ F+G+LNAC+H GLI
Sbjct: 376 FNRMSIRDVISYSALIAALADHGKAEDAMNLFSEMQKEGIRPNQVTFVGLLNACSHVGLI 435

Query: 241 EQGCKYFELMRKGFGIEPQKGHYACMVDLLGRAGEVEMAYN-VIKGAREIDAKTWGSLLG 300
           E+GC+YFELM + FGIEP K HYACMVDLLGRAG++E AYN +I      DAK WGSLLG
Sbjct: 436 EEGCQYFELMTRVFGIEPLKEHYACMVDLLGRAGQLEKAYNLIIYTIGAADAKIWGSLLG 495

Query: 301 ACKIHGNLEVGEIAAKHLFEMEPENTGNYVLLANTYAQMKEWNEAEKVRNVMVERGIKKF 360
           ACK+HGN ++ EIAA HLF++EP + GNYVLLANTYA++ +W++AE+VR +M E G+ K 
Sbjct: 496 ACKVHGNTKLSEIAAMHLFKIEPHDAGNYVLLANTYAEINKWDDAERVRKMMSEGGMIKS 555

Query: 361 PGYSWVSR 368
           PG SW+ +
Sbjct: 556 PGCSWIEK 563

The following BLAST results are available for this feature:
BLAST of CSPI03G41070 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP301_ARATH8.5e-8742.08Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana GN... [more]
PP403_ARATH3.4e-8039.30Putative pentatricopeptide repeat-containing protein At5g37570 OS=Arabidopsis th... [more]
PP417_ARATH5.7e-7539.02Pentatricopeptide repeat-containing protein At5g44230 OS=Arabidopsis thaliana GN... [more]
PPR25_ARATH5.3e-7335.52Pentatricopeptide repeat-containing protein At1g09410 OS=Arabidopsis thaliana GN... [more]
PPR84_ARATH1.7e-7134.70Pentatricopeptide repeat-containing protein At1g56690, mitochondrial OS=Arabidop... [more]
BLAST of CSPI03G41070 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LDB3_CUCSA1.0e-216100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G846040 PE=4 SV=1[more]
A0A061GBJ3_THECC6.4e-13462.67Tetratricopeptide-like helical, putative OS=Theobroma cacao GN=TCM_029111 PE=4 S... [more]
A0A0B0MBH4_GOSAR1.3e-13162.30Putative pentatricopeptide repeat-containing-like protein OS=Gossypium arboreum ... [more]
V4RY09_9ROSI1.3e-13161.04Uncharacterized protein OS=Citrus clementina GN=CICLE_v10025313mg PE=4 SV=1[more]
V4SH02_9ROSI1.3e-13161.04Uncharacterized protein OS=Citrus clementina GN=CICLE_v10025313mg PE=4 SV=1[more]
BLAST of CSPI03G41070 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G02750.14.8e-8842.08 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G37570.11.9e-8139.30 Pentatricopeptide repeat (PPR-like) superfamily protein[more]
AT5G44230.13.2e-7639.02 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G09410.13.0e-7435.52 pentatricopeptide (PPR) repeat-containing protein[more]
AT1G56690.19.7e-7334.70 Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of CSPI03G41070 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778686134|ref|XP_004141212.2|1.5e-216100.00PREDICTED: putative pentatricopeptide repeat-containing protein At5g37570 [Cucum... [more]
gi|659128013|ref|XP_008464004.1|1.2e-20594.85PREDICTED: putative pentatricopeptide repeat-containing protein At5g37570 [Cucum... [more]
gi|1009111944|ref|XP_015865825.1|8.0e-14668.03PREDICTED: putative pentatricopeptide repeat-containing protein At5g37570 isofor... [more]
gi|1009111946|ref|XP_015865829.1|2.1e-14167.21PREDICTED: putative pentatricopeptide repeat-containing protein At5g37570 isofor... [more]
gi|645243951|ref|XP_008228213.1|2.5e-13963.86PREDICTED: putative pentatricopeptide repeat-containing protein At5g37570 [Prunu... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G41070.1CSPI03G41070.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 93..118
score: 1.9E-5coord: 27..56
score: 3.8E-5coord: 62..83
score: 0.0025coord: 1..25
score: 1.4E-5coord: 330..356
score:
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 188..235
score: 1.5
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 227..258
score: 0.0013coord: 27..55
score: 2.9E-5coord: 190..223
score: 8.0E-9coord: 1..28
score: 6.1E-4coord: 90..119
score: 2.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 324..358
score: 8.659coord: 122..156
score: 5.821coord: 157..187
score: 7.421coord: 1..24
score: 8.528coord: 259..293
score: 5.908coord: 87..121
score: 9.58coord: 188..222
score: 13.318coord: 223..253
score: 6.665coord: 25..59
score: 9
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 15..177
score: 3.9E-7coord: 178..225
score: 1.5E-6coord: 263..346
score: 1.
IPR011990Tetratricopeptide-like helical domainunknownSSF48452TPR-likecoord: 5..151
score: 2.2E-7coord: 318..353
score: 8.85E-5coord: 167..215
score: 8.8
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 1..365
score: 1.4E