CSPI03G39980 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G39980
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr3 : 34244916 .. 34245236 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTTAGGTCTCCAAACGCAGAATGTTTCGGATGGAACTTCTTCCAATTCGTCCACTGACGACAACGACGATGAAGAAGACAAAGAGAAAGACGAAGAAGAAGATGACCGCGGATTGATATCGCGATCTCGGATTAGAAGCTTCTCCAAGGGAATTCGAATCGGGTTCACGATTGGTGAATCTCGACCGTGGATTTCCGGTGTTTCAACTGGAGGTTCATCAAACAGAAGATCGGAATTGAAAATAGGAAACGCAGGAGGGGTTAAACCGGGAGGTGGGGGAAGGGAGACGAATTCGAAATCATGGTCGTGTTGTTCC

mRNA sequence

ATGGATTTAGGTCTCCAAACGCAGAATGTTTCGGATGGAACTTCTTCCAATTCGTCCACTGACGACAACGACGATGAAGAAGACAAAGAGAAAGACGAAGAAGAAGATGACCGCGGATTGATATCGCGATCTCGGATTAGAAGCTTCTCCAAGGGAATTCGAATCGGGTTCACGATTGGTGAATCTCGACCGTGGATTTCCGGTGTTTCAACTGGAGGTTCATCAAACAGAAGATCGGAATTGAAAATAGGAAACGCAGGAGGGGTTAAACCGGGAGGTGGGGGAAGGGAGACGAATTCGAAATCATGGTCGTGTTGTTCC

Coding sequence (CDS)

ATGGATTTAGGTCTCCAAACGCAGAATGTTTCGGATGGAACTTCTTCCAATTCGTCCACTGACGACAACGACGATGAAGAAGACAAAGAGAAAGACGAAGAAGAAGATGACCGCGGATTGATATCGCGATCTCGGATTAGAAGCTTCTCCAAGGGAATTCGAATCGGGTTCACGATTGGTGAATCTCGACCGTGGATTTCCGGTGTTTCAACTGGAGGTTCATCAAACAGAAGATCGGAATTGAAAATAGGAAACGCAGGAGGGGTTAAACCGGGAGGTGGGGGAAGGGAGACGAATTCGAAATCATGGTCGTGTTGTTCC
Homology
[Close]
BLAST of CSPI03G39980 vs. TrEMBL
Match: A0A0A0LG63_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G837045 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 1.6e-48
Identity = 106/107 (99.07%), Postives = 107/107 (100.00%), Query Frame = 1 

Query: 1   MDLGLQTQNVSDGTSSNSSTDDNDDEEDKEKDEEEDDRGLISRSRIRSFSKGIRIGFTIG 60
           MDLGLQTQNVSDGTSSNSSTDDNDDEEDKE+DEEEDDRGLISRSRIRSFSKGIRIGFTIG
Sbjct: 1   MDLGLQTQNVSDGTSSNSSTDDNDDEEDKEEDEEEDDRGLISRSRIRSFSKGIRIGFTIG 60

Query: 61  ESRPWISGVSTGGSSNRRSELKIGNAGGVKPGGGGRETNSKSWSCCS 108
           ESRPWISGVSTGGSSNRRSELKIGNAGGVKPGGGGRETNSKSWSCCS
Sbjct: 61  ESRPWISGVSTGGSSNRRSELKIGNAGGVKPGGGGRETNSKSWSCCS 107

[Close]
BLAST of CSPI03G39980 vs. NCBI nr
Match: gi|700204539|gb|KGN59672.1| (hypothetical protein Csa_3G837045 [Cucumis sativus])

HSP 1 Score: 199.9 bits (507), Expect = 2.2e-48
Identity = 106/107 (99.07%), Postives = 107/107 (100.00%), Query Frame = 1 

Query: 1   MDLGLQTQNVSDGTSSNSSTDDNDDEEDKEKDEEEDDRGLISRSRIRSFSKGIRIGFTIG 60
           MDLGLQTQNVSDGTSSNSSTDDNDDEEDKE+DEEEDDRGLISRSRIRSFSKGIRIGFTIG
Sbjct: 1   MDLGLQTQNVSDGTSSNSSTDDNDDEEDKEEDEEEDDRGLISRSRIRSFSKGIRIGFTIG 60

Query: 61  ESRPWISGVSTGGSSNRRSELKIGNAGGVKPGGGGRETNSKSWSCCS 108
           ESRPWISGVSTGGSSNRRSELKIGNAGGVKPGGGGRETNSKSWSCCS
Sbjct: 61  ESRPWISGVSTGGSSNRRSELKIGNAGGVKPGGGGRETNSKSWSCCS 107

The following BLAST results are available for this feature:
BLAST of CSPI03G39980 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI03G39980 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LG63_CUCSA1.6e-4899.07Uncharacterized protein OS=Cucumis sativus GN=Csa_3G837045 PE=4 SV=1[more]
BLAST of CSPI03G39980 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI03G39980 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700204539|gb|KGN59672.1|2.2e-4899.07hypothetical protein Csa_3G837045 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G39980.1CSPI03G39980.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI03G39980Wax gourdcpiwgoB238
CSPI03G39980Wax gourdcpiwgoB267
CSPI03G39980Wild cucumber (PI 183967)cpicpiB020
CSPI03G39980Wild cucumber (PI 183967)cpicpiB118
CSPI03G39980Cucumber (Gy14) v1cgycpiB295
CSPI03G39980Cucumber (Gy14) v1cgycpiB504
CSPI03G39980Cucurbita maxima (Rimu)cmacpiB121
CSPI03G39980Cucurbita maxima (Rimu)cmacpiB241
CSPI03G39980Cucurbita maxima (Rimu)cmacpiB287
CSPI03G39980Cucurbita maxima (Rimu)cmacpiB711
CSPI03G39980Cucurbita pepo (Zucchini)cpecpiB395
CSPI03G39980Cucurbita moschata (Rifu)cmocpiB116
CSPI03G39980Cucurbita moschata (Rifu)cmocpiB229
CSPI03G39980Cucurbita moschata (Rifu)cmocpiB277
CSPI03G39980Cucurbita moschata (Rifu)cmocpiB705
CSPI03G39980Cucumber (Chinese Long) v2cpicuB106
CSPI03G39980Cucumber (Chinese Long) v2cpicuB120
CSPI03G39980Cucumber (Chinese Long) v2cpicuB142
CSPI03G39980Melon (DHL92) v3.5.1cpimeB162
CSPI03G39980Melon (DHL92) v3.5.1cpimeB171
CSPI03G39980Melon (DHL92) v3.5.1cpimeB189
CSPI03G39980Melon (DHL92) v3.5.1cpimeB214
CSPI03G39980Watermelon (Charleston Gray)cpiwcgB179
CSPI03G39980Watermelon (Charleston Gray)cpiwcgB195
CSPI03G39980Watermelon (Charleston Gray)cpiwcgB208
CSPI03G39980Watermelon (Charleston Gray)cpiwcgB234
CSPI03G39980Watermelon (Charleston Gray)cpiwcgB251
CSPI03G39980Watermelon (97103) v1cpiwmB185
CSPI03G39980Watermelon (97103) v1cpiwmB198
CSPI03G39980Watermelon (97103) v1cpiwmB238
CSPI03G39980Watermelon (97103) v1cpiwmB260
CSPI03G39980Watermelon (97103) v1cpiwmB280
CSPI03G39980Cucurbita pepo (Zucchini)cpecpiB173
CSPI03G39980Cucurbita pepo (Zucchini)cpecpiB599
CSPI03G39980Cucurbita pepo (Zucchini)cpecpiB674
CSPI03G39980Bottle gourd (USVL1VR-Ls)cpilsiB174
CSPI03G39980Bottle gourd (USVL1VR-Ls)cpilsiB184
CSPI03G39980Bottle gourd (USVL1VR-Ls)cpilsiB193
CSPI03G39980Melon (DHL92) v3.6.1cpimedB155
CSPI03G39980Melon (DHL92) v3.6.1cpimedB208
CSPI03G39980Cucumber (Gy14) v2cgybcpiB111
CSPI03G39980Cucumber (Gy14) v2cgybcpiB215
CSPI03G39980Silver-seed gourdcarcpiB0291
CSPI03G39980Silver-seed gourdcarcpiB0401
CSPI03G39980Silver-seed gourdcarcpiB0472
CSPI03G39980Silver-seed gourdcarcpiB0719
CSPI03G39980Cucumber (Chinese Long) v3cpicucB128
CSPI03G39980Cucumber (Chinese Long) v3cpicucB131
CSPI03G39980Cucumber (Chinese Long) v3cpicucB145
CSPI03G39980Cucumber (Chinese Long) v3cpicucB170
CSPI03G39980Watermelon (97103) v2cpiwmbB189
CSPI03G39980Watermelon (97103) v2cpiwmbB220
CSPI03G39980Watermelon (97103) v2cpiwmbB262