CSPI03G38540 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTCTTTATTAATTTCCGTTTTTTCCTCATATTTTTAATTTTATTTTCCGGTTCCCAACGCCTTAATTTCTTTCTATGTCGGTGATTTCTCTGTTTAGGTTTCAAAATTCTCACAATTCCTTTGCCTTTTGAATTTCAATCGTATGGGGAATTGGAGAAGACGATACGGCTCTGAAATTCCTCATCATCAGCTACTCAAATCCCCCAGAAACCCTTCTCCAGGTATTTATGTAATGCGCTTCCTCCCTTCAATCCTATTTCCTTGATTTTTCCTAATTTTAATCGTTTTCATTCTTCGATTTCTTGATTCTTTCTTCTTCTCATGCTTCCTTCTTCTTGGTTCTTTCATTATGAATTATCCCTCTCACGAATAATGGTTGCGTTTATTGTTCTGTTTTTCCCTTCTTTTTTTTTCTTTTCGTTCAACCCTTTTCTCCAATAACTTCTTTGAATTTAGCTCTTGTTTTATAGCGGATTTTGATTCCTTGTTTAGGTTTGTTAGCTAATGCTTATTTTTTAAGTTATGCTTTCGATTCATTTTTAGCATTCTTAAAGTTTCCGACTCTATTGTATAAGCCTATATCGATTTCATCTTTGAAAGTGACTTTACTTTTGTGTTTTTGCTTGTTTTGGGTATTCAATTTTCTTCTGGGCAATGAAGTTTTGTAGTGTAATTACTTTGTATGGGGGGTTTTGTGCGTTTTTTTTTTTTTAATAATCCTCTTTTGTTACAGATAATTGGCACGCTGGTGTGCCGTCGTGGGAAAAGAAGTTTTGTTCATCTGTTGGGTTGATTTCATGGAAGAAGTTGTTGGATACTAAGAAGTGTATGTACCTTTATGACAATGTGGTTAAATGGAATGACTCGGCTGGTGAAGAAGCGTTTCATAATGCAAAGAGTAGGTTTTGGGCGGAAATTAATGGATTGCCTTGCGATATATCGTTGCCTGATCCTGACATTTATATCGATGAGATCGATTGGAATTGTAATGTTGACCCTGATCTAATGTTAGATTTGGAGAGAGAACAGATTGCTCCTGTTAGGGAGGGAGATGTAGTGATTGCCAGTTTGTATGAGGCTCTTGGCTTGTATCAGTCATATACATGCGTCGGATGGGGCGAAGCTAAAGAAGATCTTCAGAAACCGAAAGCAGAGCCGGGTAATTGTGATCAGAAGGTGGATGATGGACAAAACTCTTGGGAGATGAGTTCTGCTACCAAGAATAATGTGGGTTTGAGAGATGAGTATTTGAATAATTCAGTTGGTTGGAATGATTGGGGGAATAATCACACTCACAACCCCAGTTACAATCAAAATCACAATCACAAAGAATCAGACAATAGGTTTACGAATCGGATTTGGAGAACATGTGATGTGAACTGCAAAAACTCGGGTGGGAATTGGTACCATTCATCGACATTCAAGGGATCGAGATTTCATTACGATGGCTATCAAAAGGAAAATGGTTGGAGAAACAGCAGGAGAGGAGGAAGGAAGAGAGTAAATTTTGCTCATGAACCTAATAATTCTCCTGAATGTTGGAAGAATTCAAATCCTAATAGACCAGTAAACCAACAATGGTCTAGCAATGGGATAAATGGAGTCAGGAGAAACCAGTTTTGTGAATATTGAGTCTATATATTATCATTCCTTATATTCTTTGTTACCTTTCAGGTAGAAATCATATAATATACAAAAACAGGCAAACTACGTGTCGTTTGCTTTTCTTTGCGCACGGCTTGAGTTTCGGTGAGTATAGAAATATATATATATATGTTCATTCCCCCCGATTCCTTTGTACAGTACAGTCTAAATGAGCAATATTGTGGCATATTTTTTATGTTGTTAGAGAAAGCTTTCCC ATGGGGAATTGGAGAAGACGATACGGCTCTGAAATTCCTCATCATCAGCTACTCAAATCCCCCAGAAACCCTTCTCCAGATAATTGGCACGCTGGTGTGCCGTCGTGGGAAAAGAAGTTTTGTTCATCTGTTGGGTTGATTTCATGGAAGAAGTTGTTGGATACTAAGAAGTGTATGTACCTTTATGACAATGTGGTTAAATGGAATGACTCGGCTGGTGAAGAAGCGTTTCATAATGCAAAGAGTAGGTTTTGGGCGGAAATTAATGGATTGCCTTGCGATATATCGTTGCCTGATCCTGACATTTATATCGATGAGATCGATTGGAATTGTAATGTTGACCCTGATCTAATGTTAGATTTGGAGAGAGAACAGATTGCTCCTGTTAGGGAGGGAGATGTAGTGATTGCCAGTTTGTATGAGGCTCTTGGCTTGTATCAGTCATATACATGCGTCGGATGGGGCGAAGCTAAAGAAGATCTTCAGAAACCGAAAGCAGAGCCGGGTAATTGTGATCAGAAGGTGGATGATGGACAAAACTCTTGGGAGATGAGTTCTGCTACCAAGAATAATGTGGGTTTGAGAGATGAGTATTTGAATAATTCAGTTGGTTGGAATGATTGGGGGAATAATCACACTCACAACCCCAGTTACAATCAAAATCACAATCACAAAGAATCAGACAATAGGTTTACGAATCGGATTTGGAGAACATGTGATGTGAACTGCAAAAACTCGGGTGGGAATTGGTACCATTCATCGACATTCAAGGGATCGAGATTTCATTACGATGGCTATCAAAAGGAAAATGGTTGGAGAAACAGCAGGAGAGGAGGAAGGAAGAGAGTAAATTTTGCTCATGAACCTAATAATTCTCCTGAATGTTGGAAGAATTCAAATCCTAATAGACCAGTAAACCAACAATGGTCTAGCAATGGGATAAATGGAGTCAGGAGAAACCAGTTTTGTGAATATTGA ATGGGGAATTGGAGAAGACGATACGGCTCTGAAATTCCTCATCATCAGCTACTCAAATCCCCCAGAAACCCTTCTCCAGATAATTGGCACGCTGGTGTGCCGTCGTGGGAAAAGAAGTTTTGTTCATCTGTTGGGTTGATTTCATGGAAGAAGTTGTTGGATACTAAGAAGTGTATGTACCTTTATGACAATGTGGTTAAATGGAATGACTCGGCTGGTGAAGAAGCGTTTCATAATGCAAAGAGTAGGTTTTGGGCGGAAATTAATGGATTGCCTTGCGATATATCGTTGCCTGATCCTGACATTTATATCGATGAGATCGATTGGAATTGTAATGTTGACCCTGATCTAATGTTAGATTTGGAGAGAGAACAGATTGCTCCTGTTAGGGAGGGAGATGTAGTGATTGCCAGTTTGTATGAGGCTCTTGGCTTGTATCAGTCATATACATGCGTCGGATGGGGCGAAGCTAAAGAAGATCTTCAGAAACCGAAAGCAGAGCCGGGTAATTGTGATCAGAAGGTGGATGATGGACAAAACTCTTGGGAGATGAGTTCTGCTACCAAGAATAATGTGGGTTTGAGAGATGAGTATTTGAATAATTCAGTTGGTTGGAATGATTGGGGGAATAATCACACTCACAACCCCAGTTACAATCAAAATCACAATCACAAAGAATCAGACAATAGGTTTACGAATCGGATTTGGAGAACATGTGATGTGAACTGCAAAAACTCGGGTGGGAATTGGTACCATTCATCGACATTCAAGGGATCGAGATTTCATTACGATGGCTATCAAAAGGAAAATGGTTGGAGAAACAGCAGGAGAGGAGGAAGGAAGAGAGTAAATTTTGCTCATGAACCTAATAATTCTCCTGAATGTTGGAAGAATTCAAATCCTAATAGACCAGTAAACCAACAATGGTCTAGCAATGGGATAAATGGAGTCAGGAGAAACCAGTTTTGTGAATATTGA
BLAST of CSPI03G38540 vs. TrEMBL
Match: A0A0A0LC07_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G824170 PE=4 SV=1) HSP 1 Score: 706.4 bits (1822), Expect = 1.6e-200 Identity = 325/325 (100.00%), Postives = 325/325 (100.00%), Query Frame = 1
BLAST of CSPI03G38540 vs. TrEMBL
Match: A0A067K358_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22445 PE=4 SV=1) HSP 1 Score: 249.2 bits (635), Expect = 6.8e-63 Identity = 144/304 (47.37%), Postives = 191/304 (62.83%), Query Frame = 1
BLAST of CSPI03G38540 vs. TrEMBL
Match: A0A061EWC4_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_024498 PE=4 SV=1) HSP 1 Score: 242.3 bits (617), Expect = 8.4e-61 Identity = 147/308 (47.73%), Postives = 189/308 (61.36%), Query Frame = 1
BLAST of CSPI03G38540 vs. TrEMBL
Match: A0A0D2TT12_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G012800 PE=4 SV=1) HSP 1 Score: 241.5 bits (615), Expect = 1.4e-60 Identity = 139/293 (47.44%), Postives = 180/293 (61.43%), Query Frame = 1
BLAST of CSPI03G38540 vs. TrEMBL
Match: B9SVT2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0255530 PE=4 SV=1) HSP 1 Score: 239.2 bits (609), Expect = 7.1e-60 Identity = 134/297 (45.12%), Postives = 177/297 (59.60%), Query Frame = 1
BLAST of CSPI03G38540 vs. TAIR10
Match: AT5G03990.1 (AT5G03990.1 unknown protein) HSP 1 Score: 165.2 bits (417), Expect = 6.6e-41 Identity = 117/331 (35.35%), Postives = 167/331 (50.45%), Query Frame = 1
BLAST of CSPI03G38540 vs. TAIR10
Match: AT3G51940.1 (AT3G51940.1 unknown protein) HSP 1 Score: 119.4 bits (298), Expect = 4.1e-27 Identity = 92/294 (31.29%), Postives = 130/294 (44.22%), Query Frame = 1
BLAST of CSPI03G38540 vs. NCBI nr
Match: gi|449437803|ref|XP_004136680.1| (PREDICTED: uncharacterized protein LOC101209753 [Cucumis sativus]) HSP 1 Score: 706.4 bits (1822), Expect = 2.2e-200 Identity = 325/325 (100.00%), Postives = 325/325 (100.00%), Query Frame = 1
BLAST of CSPI03G38540 vs. NCBI nr
Match: gi|659085315|ref|XP_008443354.1| (PREDICTED: uncharacterized protein DDB_G0287625 isoform X1 [Cucumis melo]) HSP 1 Score: 677.2 bits (1746), Expect = 1.5e-191 Identity = 314/328 (95.73%), Postives = 319/328 (97.26%), Query Frame = 1
BLAST of CSPI03G38540 vs. NCBI nr
Match: gi|659085317|ref|XP_008443355.1| (PREDICTED: uncharacterized protein LOC103486962 isoform X2 [Cucumis melo]) HSP 1 Score: 554.7 bits (1428), Expect = 1.1e-154 Identity = 260/270 (96.30%), Postives = 263/270 (97.41%), Query Frame = 1
BLAST of CSPI03G38540 vs. NCBI nr
Match: gi|802725070|ref|XP_012085944.1| (PREDICTED: uncharacterized protein LOC105645055 [Jatropha curcas]) HSP 1 Score: 249.2 bits (635), Expect = 9.8e-63 Identity = 144/304 (47.37%), Postives = 191/304 (62.83%), Query Frame = 1
BLAST of CSPI03G38540 vs. NCBI nr
Match: gi|590635343|ref|XP_007028609.1| (Uncharacterized protein TCM_024498 [Theobroma cacao]) HSP 1 Score: 242.3 bits (617), Expect = 1.2e-60 Identity = 147/308 (47.73%), Postives = 189/308 (61.36%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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