CSPI03G36470 (gene) Wild cucumber (PI 183967)

NameCSPI03G36470
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionAt2g42110
LocationChr3 : 31698872 .. 31700756 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAATTTCCCTCTTCATTATTTCTAAATCCAACCTTTCCCCAATTTCTCACTCAACATTTTCCCAATTATTTCTCTCTCTCTCTCTCTCTCTCTAGATCTATGGATTCTTCAATTGGCAATGTTCAGCACGTTCCCAGAAAATCCTCCGATGAGCTTTTGAGGAAATTTGCTGAGGTGGGGTCGGAGTCCGGTGGTGGAAGAAGGTTGTTGACGGTGGTTAAGAGGCGGCGGAAGAGGGTTAATAACGAGGAGTACTGTGATAGCCCCTCCGGTACTGGCGGAGTGGTGGAGCGGAAATGGCTGATTTCGCCTGTGGGGAGGAAGTCGGTTGTGTTGAAGAAAGTTGGGATTGGAAATGGAAGGTCTCAGCAGCTGAGGATTAGAGATTTTAGAAACAAATCTATTCTTGGAGCCATTCAAAAGGTAATTCCATATATATTTATACACACACTTCCTCTCCTTGTTTGTTTGAACTATTCAATGTGCACTGTTTCATAAGAATTCAGTGTTTATTAGATTGTTAATTTTGTGATGAATTTACCCAATTAAGTTAGCTATTATAAAGAGAAAAATCAAAGATATTTTACACTATTAAAAATTAATTAAACACAATGATTAAAAAGTTTAACCATATATTGATTCTTTTTAAAGTGTACGATTTAAGGGATGAATTTGTAATTTAAATTTTATTATATTTGAAAAAGAAAATTTTATTGTGTTTGAGTGATTATTAGTTTGATGACCTTATTGAATTATAGGTCCTTTTTCTTTTCTTTTATTCAAAACAAATGCTGGTTTAATGGATGGGGTTTCCATTGTGTTTAACATAATATGCCATAACAAACATTTGTCACAATTCATCATTTTGTATCTAATTGAAAATAAAAAGGATTGGTTCTGTATTAAATAATTATAAACATTATTTTTTTTCAATCAAATATAGTCTCATTTTTTATAATCAAAATGAAAAAGAAAAAAAAAATTAAAAGTATTCGAGTTAGGTAATATTTAAACATAATTACTATAATTATAAAATTGTATAGCAATGTATATGGTGATGATTTCCCCCTACCAGGTGGCATTATTGTCACTTTCATTAATGTTATTTCTTTCCCCTAAGTTTCCATAACCATGACCTCTCTACTATACCCTTTCACTCAACTTTAATTCCCACCCATTTCCATTTTAAATATCATTTCCAAATTTCAAATCATTATATTCGTATTAACAAAAAAAAAAAAAAAAAAAAAAAGGGTTTTTAACCCATTTTTTTTTTTTTTAAAAAAAAAAAAAATGGGTTAAAAACCCTTTTTTTTTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAGTGTTTTCAACCCATTTGTTTTTCTTCTAAAACTCTCTCAACTAACAAATTCATTTATAATAATATAAGCTATACTTAATATGATATAGTATAGTTTGTGCTTATGTTGATTAATTTTCCATGATCTTACCTTAAAACATTGAGTAGCATTTAGTTAATTTGATAGTTGAATGATTTAGTTTGGTATTGTATGATGTAGACATGGCGAAGAACAGTGGAAGGAGCATCAAAGGTTTTGTTAGAGAAACATTACAACACTCATAGACGTTTGATAAGTGACATTGTCTAATTAATTTCTCTTCTTTTTCTCCATTTTTCTCTCCTTATCTACTTAATTATATTTGTTTCTAATCTTTTCTGTTTAGGAAGCTCTGATTATTTTGTTTAATCTTCATGGAAAAAATAAATTATATGTTTAATCTTCTATACAAATCCATAACACACATGTAATGTAACCCCCTACTTGTTCAATTAACCTCTTATTTCTATGAATCAATCTATTGCTTTTCCAGATTCTCTCACAATCATCTATCTATCTA

mRNA sequence

ATGGATTCTTCAATTGGCAATGTTCAGCACGTTCCCAGAAAATCCTCCGATGAGCTTTTGAGGAAATTTGCTGAGGTGGGGTCGGAGTCCGGTGGTGGAAGAAGGTTGTTGACGGTGGTTAAGAGGCGGCGGAAGAGGGTTAATAACGAGGAGTACTGTGATAGCCCCTCCGGTACTGGCGGAGTGGTGGAGCGGAAATGGCTGATTTCGCCTGTGGGGAGGAAGTCGGTTGTGTTGAAGAAAGTTGGGATTGGAAATGGAAGGTCTCAGCAGCTGAGGATTAGAGATTTTAGAAACAAATCTATTCTTGGAGCCATTCAAAAGACATGGCGAAGAACAGTGGAAGGAGCATCAAAGGTTTTGTTAGAGAAACATTACAACACTCATAGACGTTTGATAAGTGACATTGTCTAA

Coding sequence (CDS)

ATGGATTCTTCAATTGGCAATGTTCAGCACGTTCCCAGAAAATCCTCCGATGAGCTTTTGAGGAAATTTGCTGAGGTGGGGTCGGAGTCCGGTGGTGGAAGAAGGTTGTTGACGGTGGTTAAGAGGCGGCGGAAGAGGGTTAATAACGAGGAGTACTGTGATAGCCCCTCCGGTACTGGCGGAGTGGTGGAGCGGAAATGGCTGATTTCGCCTGTGGGGAGGAAGTCGGTTGTGTTGAAGAAAGTTGGGATTGGAAATGGAAGGTCTCAGCAGCTGAGGATTAGAGATTTTAGAAACAAATCTATTCTTGGAGCCATTCAAAAGACATGGCGAAGAACAGTGGAAGGAGCATCAAAGGTTTTGTTAGAGAAACATTACAACACTCATAGACGTTTGATAAGTGACATTGTCTAA
BLAST of CSPI03G36470 vs. TrEMBL
Match: A0A0A0LGY2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G807310 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 8.4e-71
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 1

Query: 1   MDSSIGNVQHVPRKSSDELLRKFAEVGSESGGGRRLLTVVKRRRKRVNNEEYCDSPSGTG 60
           MDSSIGNVQHVPRKSSDELLRKFAEVGSESGGGRRLLTVVKRRRKRVNNEEYCDSPSGTG
Sbjct: 1   MDSSIGNVQHVPRKSSDELLRKFAEVGSESGGGRRLLTVVKRRRKRVNNEEYCDSPSGTG 60

Query: 61  GVVERKWLISPVGRKSVVLKKVGIGNGRSQQLRIRDFRNKSILGAIQKTWRRTVEGASKV 120
           GVVERKWLISPVGRKSVVLKKVGIGNGRSQQLRIRDFRNKSILGAIQKTWRRTVEGASKV
Sbjct: 61  GVVERKWLISPVGRKSVVLKKVGIGNGRSQQLRIRDFRNKSILGAIQKTWRRTVEGASKV 120

Query: 121 LLEKHYNTHRRLISDIV 138
           LLEKHYNTHRRLISDIV
Sbjct: 121 LLEKHYNTHRRLISDIV 137

BLAST of CSPI03G36470 vs. TrEMBL
Match: A0A067G5S0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g035775mg PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 7.0e-33
Identity = 78/149 (52.35%), Postives = 106/149 (71.14%), Query Frame = 1

Query: 1   MDSSIGN--VQHVPRKSSDELLRKFAEVGSESGGGRRLLTVVKRRRKRVNNE-----EYC 60
           MDS   N  +QHV +KSSDELLRKFAE+G E    R+ L + KRR++ +++      EYC
Sbjct: 1   MDSENSNAKIQHVNKKSSDELLRKFAELGDEKKEARKELRLAKRRKRIMSSSGRRGGEYC 60

Query: 61  DSP---SGTGGVVERKWLISPVG--RKSVVLKKVGIGNGRSQQLRIRDFRNKSILGAIQK 120
           +SP   +G+G +VERKWL+ P    R+  +L+++GIG     QLR RD RNKS+ G I+K
Sbjct: 61  ESPLNNNGSGSLVERKWLLPPAAAARRPPLLRQLGIGRS---QLRARDIRNKSLFGTIEK 120

Query: 121 TWRRTVEGASKVLLEKHYNTHRRLISDIV 138
           TWR+TVEGAS+V +EKHYN H+RLI+D+V
Sbjct: 121 TWRKTVEGASRVFMEKHYNRHKRLINDVV 146

BLAST of CSPI03G36470 vs. TrEMBL
Match: V4SVT8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013031mg PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 7.0e-33
Identity = 78/149 (52.35%), Postives = 106/149 (71.14%), Query Frame = 1

Query: 1   MDSSIGN--VQHVPRKSSDELLRKFAEVGSESGGGRRLLTVVKRRRKRVNNE-----EYC 60
           MDS   N  +QHV +KSSDELLRKFAE+G E    R+ L + KRR++ +++      EYC
Sbjct: 1   MDSENSNAKIQHVNKKSSDELLRKFAELGDEKKEARKELRLAKRRKRIMSSSGRRGGEYC 60

Query: 61  DSP---SGTGGVVERKWLISPVG--RKSVVLKKVGIGNGRSQQLRIRDFRNKSILGAIQK 120
           +SP   +G+G +VERKWL+ P    R+  +L+++GIG     QLR RD RNKS+ G I+K
Sbjct: 61  ESPLNNNGSGSLVERKWLLPPAAAARRPPLLRQLGIGRS---QLRARDIRNKSLFGTIEK 120

Query: 121 TWRRTVEGASKVLLEKHYNTHRRLISDIV 138
           TWR+TVEGAS+V +EKHYN H+RLI+D+V
Sbjct: 121 TWRKTVEGASRVFMEKHYNRHKRLINDVV 146

BLAST of CSPI03G36470 vs. TrEMBL
Match: A0A0D2QAH9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G224300 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.3e-31
Identity = 79/147 (53.74%), Postives = 101/147 (68.71%), Query Frame = 1

Query: 8   VQHVPRKSSDELLRKFAEVGSESGGGRR--------LLTVVKRR------RKRVNNEEYC 67
           VQHV +KSSDELLRKFAE+  + GGG +         + VVKRR      R R  +  +C
Sbjct: 13  VQHVTKKSSDELLRKFAELDDDDGGGNKGAAFTKELRVMVVKRRKRSGFPRSRRESLGHC 72

Query: 68  DSPS--GTGGVVERKWLI-SPVGRKSVVLKKVGIGNGRSQQLRIRDFRNKSILGAIQKTW 127
           +SPS  GT G+VERKWL+  P  R+S  LK++GIG     Q+R R+ RN+SI G I+KTW
Sbjct: 73  ESPSNNGTTGLVERKWLLPPPATRRSTFLKQLGIGR---SQIRAREIRNRSIFGTIEKTW 132

Query: 128 RRTVEGASKVLLEKHYNTHRRLISDIV 138
           R+T+EGASKV +EKHYN HRRLI+D+V
Sbjct: 133 RKTIEGASKVFMEKHYNRHRRLINDVV 156

BLAST of CSPI03G36470 vs. TrEMBL
Match: A0A067JX98_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25541 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.7e-31
Identity = 79/144 (54.86%), Postives = 105/144 (72.92%), Query Frame = 1

Query: 1   MDSSIGN----VQHVPRKSSDELLRKFAEVGSESGGGRRLLTVVKRRR---KRVNNEEYC 60
           MDS+  N    VQHV +KSSDELLRKFAEV  ++   ++ L + KRR+   K+   E  C
Sbjct: 1   MDSASTNSTTTVQHVTKKSSDELLRKFAEVEDDNDEAKKELKLSKRRKIRSKQARKEVAC 60

Query: 61  DSPSG-TGGVVERKWLISPVGRKSVVLKKVGIGNGRSQQLRIRDFRNKSILGAIQKTWRR 120
           +SPS  +  +VE++ L+ PV RKSV+L+++GIG     QLR RDF+NKS+  AI+KTWR+
Sbjct: 61  ESPSHYSNSLVEKRSLLPPVTRKSVLLRQLGIGRS---QLRARDFKNKSVFVAIEKTWRK 120

Query: 121 TVEGASKVLLEKHYNTHRRLISDI 137
           T+EGAS+VLLEKHYN HRRLISD+
Sbjct: 121 TLEGASRVLLEKHYNRHRRLISDV 141

BLAST of CSPI03G36470 vs. TAIR10
Match: AT2G42110.1 (AT2G42110.1 unknown protein)

HSP 1 Score: 95.5 bits (236), Expect = 2.7e-20
Identity = 57/135 (42.22%), Postives = 81/135 (60.00%), Query Frame = 1

Query: 8   VQHVPRKSSDELLRKFAEVGSESGGGRRLLTVVKRRRKRVNN---EEYCDSPSGTGGVVE 67
           + HV +KSSDELLRKFA+        +      KRR+K   +   E+  D  S T G+VE
Sbjct: 15  ITHVNKKSSDELLRKFADPDDVDESSKS----TKRRKKSAKSSSREKGVDIESNTSGLVE 74

Query: 68  RK-WLISPVG-RKSVVLKKVGIGNGRSQQLRIRDFRNKSILGAIQKTWRRTVEGASKVLL 127
           RK  L++P   R+S+ ++++  G            RNKS++  I KTWR+T+EGAS+V +
Sbjct: 75  RKRLLLAPASKRRSLFIRQLASGKSH--------LRNKSLVRTIGKTWRKTMEGASRVFI 134

Query: 128 EKHYNTHRRLISDIV 138
           EKHYN HRRL +D+V
Sbjct: 135 EKHYNRHRRLTNDVV 137

BLAST of CSPI03G36470 vs. NCBI nr
Match: gi|449437583|ref|XP_004136571.1| (PREDICTED: uncharacterized protein LOC101222384 [Cucumis sativus])

HSP 1 Score: 274.2 bits (700), Expect = 1.2e-70
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 1

Query: 1   MDSSIGNVQHVPRKSSDELLRKFAEVGSESGGGRRLLTVVKRRRKRVNNEEYCDSPSGTG 60
           MDSSIGNVQHVPRKSSDELLRKFAEVGSESGGGRRLLTVVKRRRKRVNNEEYCDSPSGTG
Sbjct: 1   MDSSIGNVQHVPRKSSDELLRKFAEVGSESGGGRRLLTVVKRRRKRVNNEEYCDSPSGTG 60

Query: 61  GVVERKWLISPVGRKSVVLKKVGIGNGRSQQLRIRDFRNKSILGAIQKTWRRTVEGASKV 120
           GVVERKWLISPVGRKSVVLKKVGIGNGRSQQLRIRDFRNKSILGAIQKTWRRTVEGASKV
Sbjct: 61  GVVERKWLISPVGRKSVVLKKVGIGNGRSQQLRIRDFRNKSILGAIQKTWRRTVEGASKV 120

Query: 121 LLEKHYNTHRRLISDIV 138
           LLEKHYNTHRRLISDIV
Sbjct: 121 LLEKHYNTHRRLISDIV 137

BLAST of CSPI03G36470 vs. NCBI nr
Match: gi|659084750|ref|XP_008443054.1| (PREDICTED: uncharacterized protein LOC103486764 [Cucumis melo])

HSP 1 Score: 260.0 bits (663), Expect = 2.4e-66
Identity = 135/137 (98.54%), Postives = 135/137 (98.54%), Query Frame = 1

Query: 1   MDSSIGNVQHVPRKSSDELLRKFAEVGSESGGGRRLLTVVKRRRKRVNNEEYCDSPSGTG 60
           MDSSIGNVQHVPRKSSDELLRKFAEVGSESGGGRRLLTVVKRRRKRVNNEE CDSPSG G
Sbjct: 1   MDSSIGNVQHVPRKSSDELLRKFAEVGSESGGGRRLLTVVKRRRKRVNNEE-CDSPSG-G 60

Query: 61  GVVERKWLISPVGRKSVVLKKVGIGNGRSQQLRIRDFRNKSILGAIQKTWRRTVEGASKV 120
           GVVERKWLISPVGRKSVVLKKVGIGNGRSQQLRIRDFRNKSILGAIQKTWRRTVEGASKV
Sbjct: 61  GVVERKWLISPVGRKSVVLKKVGIGNGRSQQLRIRDFRNKSILGAIQKTWRRTVEGASKV 120

Query: 121 LLEKHYNTHRRLISDIV 138
           LLEKHYNTHRRLISDIV
Sbjct: 121 LLEKHYNTHRRLISDIV 135

BLAST of CSPI03G36470 vs. NCBI nr
Match: gi|1009161539|ref|XP_015898954.1| (PREDICTED: uncharacterized protein LOC107432346 [Ziziphus jujuba])

HSP 1 Score: 150.6 bits (379), Expect = 2.0e-33
Identity = 80/139 (57.55%), Postives = 102/139 (73.38%), Query Frame = 1

Query: 4   SIGNVQHVPRKSSDELLRKFAEVGSESGGG---RRLLTVVKRRRKRVNNEEYCDSP-SGT 63
           S  NVQHV +KSSDELLRKFAE+GS+SG     ++ L + KRRR R      C+SP +GT
Sbjct: 3   SANNVQHVNKKSSDELLRKFAEMGSDSGEKAPPKKELRLSKRRRTRSRTSGGCESPLNGT 62

Query: 64  GGVVERKWLISPVG-RKSVVLKKVGIGNGRSQQLRIRDFRNKSILGAIQKTWRRTVEGAS 123
             +VER+ L+ P G RKS +L+++GI       LR RDFRNKS+LG I+KTWRRT+EGAS
Sbjct: 63  NSLVERRSLLPPGGSRKSALLRQLGIHGSSHLSLRARDFRNKSLLGTIEKTWRRTIEGAS 122

Query: 124 KVLLEKHYNTHRRLISDIV 138
           KV +EKHYN H+RLI+D+V
Sbjct: 123 KVFMEKHYNRHKRLINDMV 141

BLAST of CSPI03G36470 vs. NCBI nr
Match: gi|567874581|ref|XP_006429880.1| (hypothetical protein CICLE_v10013031mg [Citrus clementina])

HSP 1 Score: 148.3 bits (373), Expect = 1.0e-32
Identity = 78/149 (52.35%), Postives = 106/149 (71.14%), Query Frame = 1

Query: 1   MDSSIGN--VQHVPRKSSDELLRKFAEVGSESGGGRRLLTVVKRRRKRVNNE-----EYC 60
           MDS   N  +QHV +KSSDELLRKFAE+G E    R+ L + KRR++ +++      EYC
Sbjct: 1   MDSENSNAKIQHVNKKSSDELLRKFAELGDEKKEARKELRLAKRRKRIMSSSGRRGGEYC 60

Query: 61  DSP---SGTGGVVERKWLISPVG--RKSVVLKKVGIGNGRSQQLRIRDFRNKSILGAIQK 120
           +SP   +G+G +VERKWL+ P    R+  +L+++GIG     QLR RD RNKS+ G I+K
Sbjct: 61  ESPLNNNGSGSLVERKWLLPPAAAARRPPLLRQLGIGRS---QLRARDIRNKSLFGTIEK 120

Query: 121 TWRRTVEGASKVLLEKHYNTHRRLISDIV 138
           TWR+TVEGAS+V +EKHYN H+RLI+D+V
Sbjct: 121 TWRKTVEGASRVFMEKHYNRHKRLINDVV 146

BLAST of CSPI03G36470 vs. NCBI nr
Match: gi|568879849|ref|XP_006492858.1| (PREDICTED: uncharacterized protein LOC102626166 [Citrus sinensis])

HSP 1 Score: 145.6 bits (366), Expect = 6.5e-32
Identity = 77/149 (51.68%), Postives = 104/149 (69.80%), Query Frame = 1

Query: 1   MDSSIGN--VQHVPRKSSDELLRKFAEVGSESGGGRRLLTVVKRRRKRVNNE-----EYC 60
           MDS   N  +QHV +KSSDELLRKFAE+G E    R+ L + KRR++ +++      EYC
Sbjct: 1   MDSENSNAKIQHVNKKSSDELLRKFAELGDEKKEARKELRLAKRRKRMMSSSGRRGGEYC 60

Query: 61  DSP---SGTGGVVERKWLISPVG--RKSVVLKKVGIGNGRSQQLRIRDFRNKSILGAIQK 120
           +SP   +G+G  VERKWL+ P    R+  +L+++GIG     Q R RD RNKS+ G I+K
Sbjct: 61  ESPLNNNGSGSFVERKWLLPPAAAARRPPLLRQLGIGRS---QPRARDIRNKSLFGTIEK 120

Query: 121 TWRRTVEGASKVLLEKHYNTHRRLISDIV 138
           TWR+TVEGAS+V +EKHYN H+RLI+D+V
Sbjct: 121 TWRKTVEGASRVFMEKHYNRHKRLINDVV 146

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LGY2_CUCSA8.4e-71100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G807310 PE=4 SV=1[more]
A0A067G5S0_CITSI7.0e-3352.35Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g035775mg PE=4 SV=1[more]
V4SVT8_9ROSI7.0e-3352.35Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013031mg PE=4 SV=1[more]
A0A0D2QAH9_GOSRA1.3e-3153.74Uncharacterized protein OS=Gossypium raimondii GN=B456_002G224300 PE=4 SV=1[more]
A0A067JX98_JATCU1.7e-3154.86Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25541 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G42110.12.7e-2042.22 unknown protein[more]
Match NameE-valueIdentityDescription
gi|449437583|ref|XP_004136571.1|1.2e-70100.00PREDICTED: uncharacterized protein LOC101222384 [Cucumis sativus][more]
gi|659084750|ref|XP_008443054.1|2.4e-6698.54PREDICTED: uncharacterized protein LOC103486764 [Cucumis melo][more]
gi|1009161539|ref|XP_015898954.1|2.0e-3357.55PREDICTED: uncharacterized protein LOC107432346 [Ziziphus jujuba][more]
gi|567874581|ref|XP_006429880.1|1.0e-3252.35hypothetical protein CICLE_v10013031mg [Citrus clementina][more]
gi|568879849|ref|XP_006492858.1|6.5e-3251.68PREDICTED: uncharacterized protein LOC102626166 [Citrus sinensis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G36470.1CSPI03G36470.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36355FAMILY NOT NAMEDcoord: 7..137
score: 1.5