CSPI03G33980 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI03G33980
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Protein CHUP1, chloroplastic-like protein
Location	Chr3 : 29801036 .. 29802512 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAATACATCCTCGAAGACCGGTAATTTTGAGCCAATGTTTTTTAAAGTTGGCATTCCCTTAGCTATATCTGCAGCAGGTGGTATATGTGGTATAATGATGGCAAAAGGTTCCTTTCCATCTTCCTTAAATTTCTTCAAACCCAAATCAAAGCTCATGGAAAATGAGAACTTTCAGCCATCTTCAATCACTTCAGAGGAAGAAAAAACTTCACAACCCAATGCTGAAGAAGTGATTCTAAGCTTAAAAACCAGAGTTGAAGATCTTGAAAGTAAAGAATTGGATATAGAGAGGCAATTCATTTGGTACCAAAATCTAAAAGAAAGAGAAGCTTTATTAGTGGAGCTTAGAAACACTTTGGTCTTGGATATGGCTCATATAAACTTCTTGGAAAGGGAAATTTTGTTAATGGGAGAAGAAAACAGGAGGTTTGAGAATTTGGTGACAGAATATTTGGGAGTCTCAGAGCAACTTGAAGGTCAAAAAACAGAAAATAAGTTACTTGAGAGAGAAGTAAGGAAACTTAAGAAGAGATTGAAGGAACAATCAAAGATGATTAGAGAGAAGAATTTGAAGATTGAAGATAGTAAATCACAACTTTGGAGAAATAATGAAGAAATGGAAACAAAGAAAAAGATGATTGAGAGATTGGGGAATGAAGTAAAAGAGCTGAAAATGCAAATGGATCATCAATTGGAAGAGGAGAATAACCAAAATTTGTGCACAATAAAGGTTTCATCTTTTTAGCCTTTTTGCACTCAATTTTCATCTACTTTATGAGTTTCTATTAAGAGAAATCACAGGGAATCAAAACCAATTTCTAAAATTTATGATTTTTTCTATTAGGAAACAGATTTGCTATTTTAAAAATATTAATTTATAGTAAGTTGAAACTCTATACTTTCTGTTTTTGTTCATTTTGAAGCATCAATTCATTTTTTGCACTCAATTTGAAACACTAGTTCTTGTATTTTAAAAAATGACCACTTTTTAAAAGTATATGAATCAATCAACATTTCAAAAAACTAAAATGAATCAAGGTGGAAAGTATAAAAACAAACCTCCATTTTATATAGTTTAGTATTTCATGAATATAAATATTTTCACTTCTAACCAAGGTAGAACTTTGAAACGCTAGTTCGTCGATTTGTTAAGAGGGTATTTGGCTAACTCATGAGGTTTCTTGTTCTTGCAGAATGGAACAGAAAAAGCAGTAACAATGGAGGATTTGAACAAGCTTTCAAATGAATTCAATCAATTGAAGGATGAATTTGAGGTGTTTAGAAAGCAAGAACAAGAACAAGAACAAGAAGGCCAGAAAGAAAATCCGAAGAAAGAAGAAAGAGATAACAAAGCTTTGAATCAAAACGAATCATCATCTGATGAAACTAATTACACAAGGCCAAAGCTTCTTCGAAGGATGGGTTGTGTTAGGGGAAACGAAAAGATGAAAAGGAAAACAAGACCAGAATAA

mRNA sequence

ATGGCAAATACATCCTCGAAGACCGGTAATTTTGAGCCAATGTTTTTTAAAGTTGGCATTCCCTTAGCTATATCTGCAGCAGGTGGTATATGTGGTATAATGATGGCAAAAGGTTCCTTTCCATCTTCCTTAAATTTCTTCAAACCCAAATCAAAGCTCATGGAAAATGAGAACTTTCAGCCATCTTCAATCACTTCAGAGGAAGAAAAAACTTCACAACCCAATGCTGAAGAAGTGATTCTAAGCTTAAAAACCAGAGTTGAAGATCTTGAAAGTAAAGAATTGGATATAGAGAGGCAATTCATTTGGTACCAAAATCTAAAAGAAAGAGAAGCTTTATTAGTGGAGCTTAGAAACACTTTGGTCTTGGATATGGCTCATATAAACTTCTTGGAAAGGGAAATTTTGTTAATGGGAGAAGAAAACAGGAGGTTTGAGAATTTGGTGACAGAATATTTGGGAGTCTCAGAGCAACTTGAAGGTCAAAAAACAGAAAATAAGTTACTTGAGAGAGAAGTAAGGAAACTTAAGAAGAGATTGAAGGAACAATCAAAGATGATTAGAGAGAAGAATTTGAAGATTGAAGATAGTAAATCACAACTTTGGAGAAATAATGAAGAAATGGAAACAAAGAAAAAGATGATTGAGAGATTGGGGAATGAAGTAAAAGAGCTGAAAATGCAAATGGATCATCAATTGGAAGAGGAGAATAACCAAAATTTGTGCACAATAAAGAATGGAACAGAAAAAGCAGTAACAATGGAGGATTTGAACAAGCTTTCAAATGAATTCAATCAATTGAAGGATGAATTTGAGGTGTTTAGAAAGCAAGAACAAGAACAAGAACAAGAAGGCCAGAAAGAAAATCCGAAGAAAGAAGAAAGAGATAACAAAGCTTTGAATCAAAACGAATCATCATCTGATGAAACTAATTACACAAGGCCAAAGCTTCTTCGAAGGATGGGTTGTGTTAGGGGAAACGAAAAGATGAAAAGGAAAACAAGACCAGAATAA

Coding sequence (CDS)

ATGGCAAATACATCCTCGAAGACCGGTAATTTTGAGCCAATGTTTTTTAAAGTTGGCATTCCCTTAGCTATATCTGCAGCAGGTGGTATATGTGGTATAATGATGGCAAAAGGTTCCTTTCCATCTTCCTTAAATTTCTTCAAACCCAAATCAAAGCTCATGGAAAATGAGAACTTTCAGCCATCTTCAATCACTTCAGAGGAAGAAAAAACTTCACAACCCAATGCTGAAGAAGTGATTCTAAGCTTAAAAACCAGAGTTGAAGATCTTGAAAGTAAAGAATTGGATATAGAGAGGCAATTCATTTGGTACCAAAATCTAAAAGAAAGAGAAGCTTTATTAGTGGAGCTTAGAAACACTTTGGTCTTGGATATGGCTCATATAAACTTCTTGGAAAGGGAAATTTTGTTAATGGGAGAAGAAAACAGGAGGTTTGAGAATTTGGTGACAGAATATTTGGGAGTCTCAGAGCAACTTGAAGGTCAAAAAACAGAAAATAAGTTACTTGAGAGAGAAGTAAGGAAACTTAAGAAGAGATTGAAGGAACAATCAAAGATGATTAGAGAGAAGAATTTGAAGATTGAAGATAGTAAATCACAACTTTGGAGAAATAATGAAGAAATGGAAACAAAGAAAAAGATGATTGAGAGATTGGGGAATGAAGTAAAAGAGCTGAAAATGCAAATGGATCATCAATTGGAAGAGGAGAATAACCAAAATTTGTGCACAATAAAGAATGGAACAGAAAAAGCAGTAACAATGGAGGATTTGAACAAGCTTTCAAATGAATTCAATCAATTGAAGGATGAATTTGAGGTGTTTAGAAAGCAAGAACAAGAACAAGAACAAGAAGGCCAGAAAGAAAATCCGAAGAAAGAAGAAAGAGATAACAAAGCTTTGAATCAAAACGAATCATCATCTGATGAAACTAATTACACAAGGCCAAAGCTTCTTCGAAGGATGGGTTGTGTTAGGGGAAACGAAAAGATGAAAAGGAAAACAAGACCAGAATAA

Homology

[Close]

BLAST of CSPI03G33980 vs. TrEMBL
Match: A0A0A0LB83_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G748180 PE=4 SV=1)

HSP 1 Score: 617.5 bits (1591), Expect = 9.9e-174
Identity = 336/337 (99.70%), Postives = 337/337 (100.00%), Query Frame = 1


Query: 1   MANTSSKTGNFEPMFFKVGIPLAISAAGGICGIMMAKGSFPSSLNFFKPKSKLMENENFQ 60
           MANTSSKTGNFEPMFFKVGIPLAISAAGGICGIMMAKGSFPSSLNFFKPKSKLMENENFQ
Sbjct: 1   MANTSSKTGNFEPMFFKVGIPLAISAAGGICGIMMAKGSFPSSLNFFKPKSKLMENENFQ 60

Query: 61  PSSITSEEEKTSQPNAEEVILSLKTRVEDLESKELDIERQFIWYQNLKEREALLVELRNT 120
           PSSITSEEEKTSQPNAEEVILSLKTRVEDLESKELDIERQFIWYQNLKEREALLVELRNT
Sbjct: 61  PSSITSEEEKTSQPNAEEVILSLKTRVEDLESKELDIERQFIWYQNLKEREALLVELRNT 120

Query: 121 LVLDMAHINFLEREILLMGEENRRFENLVTEYLGVSEQLEGQKTENKLLEREVRKLKKRL 180
           LVLDMAHINFLEREILLMGEENRRFENLVTEYLGVSEQLEGQKTENKLLEREVRKLKKRL
Sbjct: 121 LVLDMAHINFLEREILLMGEENRRFENLVTEYLGVSEQLEGQKTENKLLEREVRKLKKRL 180

Query: 181 KEQSKMIREKNLKIEDSKSQLWRNNEEMETKKKMIERLGNEVKELKMQMDHQLEEENNQN 240
           KEQSKMIREKNLKIEDSKSQLWRNNEEMETKKKMIERLGNEVKELK+QMDHQLEEENNQN
Sbjct: 181 KEQSKMIREKNLKIEDSKSQLWRNNEEMETKKKMIERLGNEVKELKIQMDHQLEEENNQN 240

Query: 241 LCTIKNGTEKAVTMEDLNKLSNEFNQLKDEFEVFRKQEQEQEQEGQKENPKKEERDNKAL 300
           LCTIKNGTEKAVTMEDLNKLSNEFNQLKDEFEVFRKQEQEQEQEGQKENPKKEERDNKAL
Sbjct: 241 LCTIKNGTEKAVTMEDLNKLSNEFNQLKDEFEVFRKQEQEQEQEGQKENPKKEERDNKAL 300

Query: 301 NQNESSSDETNYTRPKLLRRMGCVRGNEKMKRKTRPE 338
           NQNESSSDETNYTRPKLLRRMGCVRGNEKMKRKTRPE
Sbjct: 301 NQNESSSDETNYTRPKLLRRMGCVRGNEKMKRKTRPE 337

[Close]

BLAST of CSPI03G33980 vs. TrEMBL
Match: A0A067JZE8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16611 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 4.2e-31
Identity = 119/339 (35.10%), Postives = 198/339 (58.41%), Query Frame = 1


Query: 1   MANTSSKT-GNFEPMFFKVGIPLAISAAGGICGIMMAKGSFPS------SLNFFKPKSKL 60
           M ++SSKT    +P+F K GIPL +S AG +   ++++ S  S      SL       + 
Sbjct: 1   MESSSSKTEAMIKPLFLKAGIPLVLSIAGIVSARIISRRSIVSVQTKVSSLETIGSDQEF 60

Query: 61  MEN-ENFQP----SSITSEEEKTSQPN-----AEEVILSLKTRVEDLESKELDIERQFIW 120
            ++ ENF      +S+   EE+T   +     +E  ILS K ++E+L+ +E D+E QF+ 
Sbjct: 61  RDHQENFDHGVNNNSVEENEEQTITSSNEFFSSEGEILSFKRKIEELQERERDLEIQFLK 120

Query: 121 YQNLKEREALLVELRNTLVLDMAHINFLEREILLMGEENRRFENLVTEYLGVSEQLEGQK 180
           YQ +K++E++L+E++N LVL+ AH+ FL+REI L   +  R  NLV EYL + EQL+  K
Sbjct: 121 YQEMKKQESVLIEIKNMLVLESAHVEFLDREISLFEADKERVHNLVLEYLRILEQLQFAK 180

Query: 181 TENKLLEREVRKLKKRLKEQSKMIREKNLKIEDSKSQLWRNNEEMETKKKMIERLGNEVK 240
            EN +L R+ +++ +++K+QS++IREKNLKIE ++ ++ +  +E+ET+  +I+++ +EV+
Sbjct: 181 MENGILRRKAKRISRKVKDQSRVIREKNLKIEATEGEILKLYDELETRTTIIKKMEDEVR 240

Query: 241 ELKMQMDHQLEEENNQNLCTI---KNGTEK----AVTMEDLNKLSNEFNQLKDE------ 297
           EL+  + +QL+EE N  L  +   +N T K    +V MED  ++ NE  QL+ +      
Sbjct: 241 ELQ-DIVNQLQEEKNGLLIKLNAAENSTAKVDAESVAMEDHKQIVNEIEQLRRDRAAENA 300

[Close]

BLAST of CSPI03G33980 vs. TrEMBL
Match: A0A061ESM4_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_022371 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 5.5e-31
Identity = 135/410 (32.93%), Postives = 223/410 (54.39%), Query Frame = 1


Query: 1   MANTSSKTGNFEPMFFKVGIPLAISAAGGICGIMMAKGSFPSSLNFFKPKSKLMENE--- 60
           M ++SSK+   +P+  K GIPLA+S AG I   ++AK      ++ F+ +   +E +   
Sbjct: 1   MESSSSKSEVIKPVILKAGIPLALSVAGFIYARIIAKRRIHPEVSSFETQVSPLETDSQE 60

Query: 61  ------NFQPSSITSEEEK------------------TSQPNAEEVILSLKTRVEDLESK 120
                 +   +S TS E++                    +   EE IL L+TRVE+L+ +
Sbjct: 61  ELRGEGSLNSTSSTSREDEDKIVTSTHFMNLIRSAEIQERTAYEEEILGLRTRVEELQKR 120

Query: 121 ELDIERQFIWYQNLKEREALLVELRNTLVLDMAHINFLEREILLMGEENRRFENLVTEYL 180
           E +++RQF+ + +LKE+E++L+ELRN L+L+  ++ FL+REI  M  EN R +N+V EYL
Sbjct: 121 EWELKRQFLRFCDLKEQESVLMELRNMLLLETFYVEFLDREISSMEAENERVKNIVMEYL 180

Query: 181 GVSEQLEGQKTENKLLEREVRKLKKRLKEQSKMIREKNLKIEDSKSQLWRNNEEMETKKK 240
            V EQLE  KT+N LL+R+ ++L ++ K Q+K+IREKNLKI+   +++ RN + +E +  
Sbjct: 181 RVVEQLEHWKTQNGLLQRKAKRLLRKTKGQAKIIREKNLKIDAKDAEIKRNGDILEGRSN 240

Query: 241 MIERLGNEVKELKMQMDHQLEEENNQ----------NLCTIKNGTEKAVTMEDLNKLSNE 300
            I++L +EV+ELK   D QL+E+ N+          +  +I    E+AVT+E+ N+L NE
Sbjct: 241 DIKKLEDEVRELKSLTD-QLQEQKNELSRKLDLAENSHSSISKSEEEAVTVEEYNQLENE 300

Query: 301 FNQLKDE-------------------FEVFRKQ-------------EQEQEQEGQKENPK 334
           + Q++++                   +E+ R Q             EQE E+ G+    +
Sbjct: 301 YEQVQEDRAAELKELIYLRWCNACLRYELKRYQLLQDYIQENKDHLEQESEEVGEIVGLR 360

[Close]

BLAST of CSPI03G33980 vs. TrEMBL
Match: A0A067F4E1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g039797mg PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 6.9e-26
Identity = 103/298 (34.56%), Postives = 172/298 (57.72%), Query Frame = 1


Query: 12  EPMFFKVGIPLAISAAGGIC---------GIMMAKG-------------SFPSSLNFFKP 71
           +P+  K G+PLAIS AG IC          +   K              S  S+ + FK 
Sbjct: 13  KPVLLKAGVPLAISVAGFICAKMMARKDDKVSSLKTDSYEKFRDDESCHSLNSTSSSFKE 72

Query: 72  KSKLMENENFQPSSITSEEEKTSQPNAEEVILSLKTRVEDLESKELDIERQFIWYQNLKE 131
             +++ + +F  S    + E   + + E  IL+L+ ++E+L+ +EL+ + QF  Y +LKE
Sbjct: 73  DEEIITSTHFMKSK--GDLEFQDKLHYELEILNLRFQIEELQKRELETKMQFARYHDLKE 132

Query: 132 REALLVELRNTLVLDMAHINFLEREILLMGEENRRFENLVTEYLGVSEQLEGQKTENKLL 191
           +E+LL+ELRN + L+ +++  L+RE+  +  EN+R ENLV  YL V +QL+  K+E+ LL
Sbjct: 133 QESLLMELRNMIFLEKSYVELLDREVSSVESENKRLENLVVLYLKVLDQLQQWKSESGLL 192

Query: 192 EREVRKLKKRLKEQSKMIREKNLKIEDSKSQLWRNNEEMETKKKMIERLGNEVKELKMQM 251
           +R+V+KL ++ KE S +IRE+NLKIE + ++L RN + +E K   I++L NE+KEL   +
Sbjct: 193 KRKVKKLVRKTKELSDIIREQNLKIESADAELLRNCDVLEEKSNAIQKLENELKELHSVI 252

Query: 252 DHQLEEENNQNLCTIKNGTEKA---VTMEDLNKLSNEFNQLKDEFEVFRKQEQEQEQE 285
           D QL+E+N++ L  ++   + A     +ED       + QL +E E  +K    + +E
Sbjct: 253 D-QLQEQNSELLNKLQEWHQSASSVTKIEDEGTTMENYRQLLNECEQLQKDRAAEAKE 307

[Close]

BLAST of CSPI03G33980 vs. TrEMBL
Match: B9H642_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s10120g PE=4 SV=2)

HSP 1 Score: 125.6 bits (314), Expect = 1.2e-25
Identity = 98/305 (32.13%), Postives = 163/305 (53.44%), Query Frame = 1


Query: 1   MANTSSKTGNFEPMFFKVGIPLAISAAGGICGIMMAKGS----FPSSLNFFKPKSKLMEN 60
           M +TSS+T   +P+F K GIPL +S AG +   ++ + +    FP           +  N
Sbjct: 4   MESTSSRTEVMKPLFLKAGIPLVLSVAGFVYARIVLRSTIAKPFPLQTTVSPVLDTIDSN 63

Query: 61  ENFQPSSITSEEEKTSQP------------------------NAEEVILSLKTRVEDLES 120
           ++F   +     + TS P                        + EE IL LK  +E+L+ 
Sbjct: 64  DDFIDEASIHSLQSTSSPIKDDDQEHMITSSQVCSSTVASHIHFEEEILGLKNEIEELQK 123

Query: 121 KELDIERQFIWYQNLKEREALLVELRNTLVLDMAHINFLEREILLMGEENRRFENLVTEY 180
           +E  +  QF+ Y+ +KE++++L EL+N L+L+ A + FL+REI L+  + + FEN + E 
Sbjct: 124 REHSLAMQFLRYRVMKEQDSVLEELKNMLLLETASVKFLDREISLIEAQTQGFENFMVEC 183

Query: 181 LGVSEQLEGQKTENKLLEREVRKLKKRLKEQSKMIREKNLKIEDSKSQLWRNNEEMETKK 240
             V EQ+E  K EN+LLER+V+KL +R +EQS++I EKN +I   ++++ R  +  E + 
Sbjct: 184 RRVLEQIEFAKKENRLLERKVKKLSRRTREQSRVIGEKNARINGLEAEIMRFCDAQEMRT 243

Query: 241 KMIERLGNEVKELKMQMDHQLEEENNQNLCTIKNGTEKA----------VTMEDLNKLSN 268
            +I++L +EV+E +  + ++L+EE N  L  +      A          + MED N+L N
Sbjct: 244 DVIKKLDDEVREFEAVV-NRLQEEKNDVLVKLDAAESPASLISKIEAEGIGMEDYNRLVN 303

[Close]

BLAST of CSPI03G33980 vs. TAIR10
Match: AT2G36650.1 (AT2G36650.1 unknown protein)

HSP 1 Score: 102.1 bits (253), Expect = 7.1e-22
Identity = 78/264 (29.55%), Postives = 154/264 (58.33%), Query Frame = 1


Query: 9   GNFEPMFFKVGIPLAISAAGGICGIMMAKGSFPSSLNFFKPKSKLMENENFQPSSITSEE 68
           G  +P+  +V + + +SA G    +++A+    +  N     +   E+ +  PS    EE
Sbjct: 11  GAMKPVILRVCVAIVLSATG----LILARFVSRNEDNEVTSSTSNPESSS-SPSRENDEE 70

Query: 69  EKTSQPNAE-EVILSLKTRVEDLESKELDIERQFIWYQNLKEREALLVELRNTLVLDMAH 128
           E+   PN + + ILSLK+R E+L+ KE ++E  F  + NLK++E +L+E ++ L L+ A 
Sbjct: 71  EEAESPNQQKQEILSLKSRFEELQRKEYEMELHFERFCNLKDQEVMLIEHKSILSLEKAQ 130

Query: 129 INFLEREILLMGEENRRFENLVTEYLGVSEQLEGQKTENKLLEREVRKLKKRLKEQSKMI 188
           ++F  +E+L M EE++R + LV  YL +  +++  ++EN LLE + +KL+++ K+  +++
Sbjct: 131 LDFFRKEVLAMEEEHKRGQALVIVYLKLVGEIQELRSENGLLEGKAKKLRRKSKQLYRVV 190

Query: 189 REKNLKIEDSKSQLWRNNEEMETKKKMIERLGNEVKELKMQMDHQLEEENNQNLCTIKNG 248
            E   KI   + +  +  +E+ETK  +++ L  +VK+++  +D  L+EE  +      N 
Sbjct: 191 NESR-KIIGVEKEFLKCVDELETKNNIVKELEGKVKDMEAYVD-VLQEEKEELFMKSSNS 250

Query: 249 TEKAVTMEDLNKLSNEFNQLKDEF 272
           T + V++ED  ++  E+ +LK ++
Sbjct: 251 TSEMVSVEDYRRIVEEYEELKKDY 267

[Close]

BLAST of CSPI03G33980 vs. NCBI nr
Match: gi|449440455|ref|XP_004138000.1| (PREDICTED: interaptin [Cucumis sativus])

HSP 1 Score: 617.5 bits (1591), Expect = 1.4e-173
Identity = 336/337 (99.70%), Postives = 337/337 (100.00%), Query Frame = 1


Query: 1   MANTSSKTGNFEPMFFKVGIPLAISAAGGICGIMMAKGSFPSSLNFFKPKSKLMENENFQ 60
           MANTSSKTGNFEPMFFKVGIPLAISAAGGICGIMMAKGSFPSSLNFFKPKSKLMENENFQ
Sbjct: 1   MANTSSKTGNFEPMFFKVGIPLAISAAGGICGIMMAKGSFPSSLNFFKPKSKLMENENFQ 60

Query: 61  PSSITSEEEKTSQPNAEEVILSLKTRVEDLESKELDIERQFIWYQNLKEREALLVELRNT 120
           PSSITSEEEKTSQPNAEEVILSLKTRVEDLESKELDIERQFIWYQNLKEREALLVELRNT
Sbjct: 61  PSSITSEEEKTSQPNAEEVILSLKTRVEDLESKELDIERQFIWYQNLKEREALLVELRNT 120

Query: 121 LVLDMAHINFLEREILLMGEENRRFENLVTEYLGVSEQLEGQKTENKLLEREVRKLKKRL 180
           LVLDMAHINFLEREILLMGEENRRFENLVTEYLGVSEQLEGQKTENKLLEREVRKLKKRL
Sbjct: 121 LVLDMAHINFLEREILLMGEENRRFENLVTEYLGVSEQLEGQKTENKLLEREVRKLKKRL 180

Query: 181 KEQSKMIREKNLKIEDSKSQLWRNNEEMETKKKMIERLGNEVKELKMQMDHQLEEENNQN 240
           KEQSKMIREKNLKIEDSKSQLWRNNEEMETKKKMIERLGNEVKELK+QMDHQLEEENNQN
Sbjct: 181 KEQSKMIREKNLKIEDSKSQLWRNNEEMETKKKMIERLGNEVKELKIQMDHQLEEENNQN 240

Query: 241 LCTIKNGTEKAVTMEDLNKLSNEFNQLKDEFEVFRKQEQEQEQEGQKENPKKEERDNKAL 300
           LCTIKNGTEKAVTMEDLNKLSNEFNQLKDEFEVFRKQEQEQEQEGQKENPKKEERDNKAL
Sbjct: 241 LCTIKNGTEKAVTMEDLNKLSNEFNQLKDEFEVFRKQEQEQEQEGQKENPKKEERDNKAL 300

Query: 301 NQNESSSDETNYTRPKLLRRMGCVRGNEKMKRKTRPE 338
           NQNESSSDETNYTRPKLLRRMGCVRGNEKMKRKTRPE
Sbjct: 301 NQNESSSDETNYTRPKLLRRMGCVRGNEKMKRKTRPE 337

[Close]

BLAST of CSPI03G33980 vs. NCBI nr
Match: gi|659084218|ref|XP_008442774.1| (PREDICTED: trichohyalin [Cucumis melo])

HSP 1 Score: 537.0 bits (1382), Expect = 2.4e-149
Identity = 298/337 (88.43%), Postives = 315/337 (93.47%), Query Frame = 1


Query: 1   MANTSSKTGNFEPMFFKVGIPLAISAAGGICGIMMAKGSFPSSLNFFKPKSKLMENENFQ 60
           MANTSSKTGNFEPMF KVGIPLA+SAAGGICGIMMAKGSFPSSLN FKP+SK+M+NENF 
Sbjct: 30  MANTSSKTGNFEPMFLKVGIPLALSAAGGICGIMMAKGSFPSSLNPFKPRSKIMKNENFH 89

Query: 61  PSSITSEEEKTSQPNAEEVILSLKTRVEDLESKELDIERQFIWYQNLKEREALLVELRNT 120
            SSI+ EEEKTSQ N EEVILSLK RVEDLE KELDIERQF+WYQNLKEREALLVELRNT
Sbjct: 90  SSSISLEEEKTSQLNVEEVILSLKGRVEDLERKELDIERQFVWYQNLKEREALLVELRNT 149

Query: 121 LVLDMAHINFLEREILLMGEENRRFENLVTEYLGVSEQLEGQKTENKLLEREVRKLKKRL 180
           LVLDMAHINFLEREILLM EEN+RFENLVTEYLGVSEQLEGQKTENKLLEREV++LKKRL
Sbjct: 150 LVLDMAHINFLEREILLMEEENKRFENLVTEYLGVSEQLEGQKTENKLLEREVKRLKKRL 209

Query: 181 KEQSKMIREKNLKIEDSKSQLWRNNEEMETKKKMIERLGNEVKELKMQMDHQLEEENNQN 240
           KEQSKMIREKNLKIEDSKSQLWRNNEEMETKKK+IERLGNEV ELKMQM  QLEEE NQ+
Sbjct: 210 KEQSKMIREKNLKIEDSKSQLWRNNEEMETKKKIIERLGNEVNELKMQMGRQLEEEKNQD 269

Query: 241 LCTIKNGTEKAVTMEDLNKLSNEFNQLKDEFEVFRKQEQEQEQEGQKENPKKEERDNKAL 300
           L T K  TEK VTM+DLNKLSNEFNQLKDEFEVFRKQEQEQEQ+GQKENPKKEER+NKAL
Sbjct: 270 LSTPKIETEKLVTMDDLNKLSNEFNQLKDEFEVFRKQEQEQEQQGQKENPKKEERNNKAL 329

Query: 301 NQNESSSDETNYTRPKLLRRMGCVRGNEKMKRKTRPE 338
           +QNE SSDETN TRPKLL+R+ CVRGNEKMKRKTRPE
Sbjct: 330 DQNELSSDETNSTRPKLLQRISCVRGNEKMKRKTRPE 366

[Close]

BLAST of CSPI03G33980 vs. NCBI nr
Match: gi|802687971|ref|XP_012082523.1| (PREDICTED: protein CHUP1, chloroplastic [Jatropha curcas])

HSP 1 Score: 143.7 bits (361), Expect = 6.0e-31
Identity = 119/339 (35.10%), Postives = 198/339 (58.41%), Query Frame = 1


Query: 1   MANTSSKT-GNFEPMFFKVGIPLAISAAGGICGIMMAKGSFPS------SLNFFKPKSKL 60
           M ++SSKT    +P+F K GIPL +S AG +   ++++ S  S      SL       + 
Sbjct: 1   MESSSSKTEAMIKPLFLKAGIPLVLSIAGIVSARIISRRSIVSVQTKVSSLETIGSDQEF 60

Query: 61  MEN-ENFQP----SSITSEEEKTSQPN-----AEEVILSLKTRVEDLESKELDIERQFIW 120
            ++ ENF      +S+   EE+T   +     +E  ILS K ++E+L+ +E D+E QF+ 
Sbjct: 61  RDHQENFDHGVNNNSVEENEEQTITSSNEFFSSEGEILSFKRKIEELQERERDLEIQFLK 120

Query: 121 YQNLKEREALLVELRNTLVLDMAHINFLEREILLMGEENRRFENLVTEYLGVSEQLEGQK 180
           YQ +K++E++L+E++N LVL+ AH+ FL+REI L   +  R  NLV EYL + EQL+  K
Sbjct: 121 YQEMKKQESVLIEIKNMLVLESAHVEFLDREISLFEADKERVHNLVLEYLRILEQLQFAK 180

Query: 181 TENKLLEREVRKLKKRLKEQSKMIREKNLKIEDSKSQLWRNNEEMETKKKMIERLGNEVK 240
            EN +L R+ +++ +++K+QS++IREKNLKIE ++ ++ +  +E+ET+  +I+++ +EV+
Sbjct: 181 MENGILRRKAKRISRKVKDQSRVIREKNLKIEATEGEILKLYDELETRTTIIKKMEDEVR 240

Query: 241 ELKMQMDHQLEEENNQNLCTI---KNGTEK----AVTMEDLNKLSNEFNQLKDE------ 297
           EL+  + +QL+EE N  L  +   +N T K    +V MED  ++ NE  QL+ +      
Sbjct: 241 ELQ-DIVNQLQEEKNGLLIKLNAAENSTAKVDAESVAMEDHKQIVNEIEQLRRDRAAENA 300

[Close]

BLAST of CSPI03G33980 vs. NCBI nr
Match: gi|590631387|ref|XP_007027548.1| (Uncharacterized protein TCM_022371 [Theobroma cacao])

HSP 1 Score: 143.3 bits (360), Expect = 7.9e-31
Identity = 135/410 (32.93%), Postives = 223/410 (54.39%), Query Frame = 1


Query: 1   MANTSSKTGNFEPMFFKVGIPLAISAAGGICGIMMAKGSFPSSLNFFKPKSKLMENE--- 60
           M ++SSK+   +P+  K GIPLA+S AG I   ++AK      ++ F+ +   +E +   
Sbjct: 1   MESSSSKSEVIKPVILKAGIPLALSVAGFIYARIIAKRRIHPEVSSFETQVSPLETDSQE 60

Query: 61  ------NFQPSSITSEEEK------------------TSQPNAEEVILSLKTRVEDLESK 120
                 +   +S TS E++                    +   EE IL L+TRVE+L+ +
Sbjct: 61  ELRGEGSLNSTSSTSREDEDKIVTSTHFMNLIRSAEIQERTAYEEEILGLRTRVEELQKR 120

Query: 121 ELDIERQFIWYQNLKEREALLVELRNTLVLDMAHINFLEREILLMGEENRRFENLVTEYL 180
           E +++RQF+ + +LKE+E++L+ELRN L+L+  ++ FL+REI  M  EN R +N+V EYL
Sbjct: 121 EWELKRQFLRFCDLKEQESVLMELRNMLLLETFYVEFLDREISSMEAENERVKNIVMEYL 180

Query: 181 GVSEQLEGQKTENKLLEREVRKLKKRLKEQSKMIREKNLKIEDSKSQLWRNNEEMETKKK 240
            V EQLE  KT+N LL+R+ ++L ++ K Q+K+IREKNLKI+   +++ RN + +E +  
Sbjct: 181 RVVEQLEHWKTQNGLLQRKAKRLLRKTKGQAKIIREKNLKIDAKDAEIKRNGDILEGRSN 240

Query: 241 MIERLGNEVKELKMQMDHQLEEENNQ----------NLCTIKNGTEKAVTMEDLNKLSNE 300
            I++L +EV+ELK   D QL+E+ N+          +  +I    E+AVT+E+ N+L NE
Sbjct: 241 DIKKLEDEVRELKSLTD-QLQEQKNELSRKLDLAENSHSSISKSEEEAVTVEEYNQLENE 300

Query: 301 FNQLKDE-------------------FEVFRKQ-------------EQEQEQEGQKENPK 334
           + Q++++                   +E+ R Q             EQE E+ G+    +
Sbjct: 301 YEQVQEDRAAELKELIYLRWCNACLRYELKRYQLLQDYIQENKDHLEQESEEVGEIVGLR 360

[Close]

BLAST of CSPI03G33980 vs. NCBI nr
Match: gi|470139277|ref|XP_004305377.1| (PREDICTED: protein CHUP1, chloroplastic [Fragaria vesca subsp. vesca])

HSP 1 Score: 141.0 bits (354), Expect = 3.9e-30
Identity = 112/302 (37.09%), Postives = 180/302 (59.60%), Query Frame = 1


Query: 1   MANTSSKTGNFEPMFFKVGIPLAISAAGGICGIMMAKGSFPSSLNFF-KPKSKLMEN--- 60
           M +++SK   F+P+  K GIPLA+S AG I   +MA+ S  S  + F K K   +EN   
Sbjct: 1   MESSTSKVEMFKPVLLKAGIPLALSVAGFIYARIMAQRSTHSKESLFEKDKVSSLENSQD 60

Query: 61  ----ENFQPSSIT---SEEEKTS----QPNAEEVILSLKTRVEDLESKELDIERQFIWYQ 120
               ++FQ  S T   S EE       +   EE I  L+ R+EDL+ +E ++  +FI Y 
Sbjct: 61  SRDKDSFQSLSCTCLLSVEESLKIYDYKLQLEEDISRLRCRLEDLQRRESELGMEFISYC 120

Query: 121 NLKEREALLVELRNTLVLDMAHINFLEREILLMGEENRRFENLVTEYLGVSEQLEGQKTE 180
           ++KE+E+ L+ELRN L+L+M  + F++RE+  M  E++R E LV EYL V EQLE  K+E
Sbjct: 121 DMKEKESALMELRNMLLLEMTRVEFMDREVSFMEAESQRLEELVREYLKVLEQLEDWKSE 180

Query: 181 NKLLEREVRKLKKRLKEQSKMIREKNLKIEDSKSQLWRNNEEMETKKKMIERLGNEVKEL 240
           N+LL+R+V+ L  +   QS++IRE++LK++  +++L R ++E+ET+ ++ +RL +E+ EL
Sbjct: 181 NELLQRQVKMLMTQASVQSRIIREQDLKLDAREAELMRIHDELETRTEVTKRLEDEIGEL 240

Query: 241 KMQMDHQLEEENN---QNLCTIKNGTEKAVTMEDLNKLSNEFNQLKDEFEVFRKQEQEQE 285
           +M +D QL++E N   +NL   +N       +E       ++ QL +E E  +K      
Sbjct: 241 RMALD-QLQDEKNGLWENLELKENSPSSISKIEGERIKIEDYTQLSEELEQLQKDRAANH 300

The following BLAST results are available for this feature:

BLAST of CSPI03G33980 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI03G33980 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LB83_CUCSA	9.9e-174	99.70	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G748180 PE=4 SV=1	[more]
A0A067JZE8_JATCU	4.2e-31	35.10	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16611 PE=4 SV=1	[more]
A0A061ESM4_THECC	5.5e-31	32.93	Uncharacterized protein OS=Theobroma cacao GN=TCM_022371 PE=4 SV=1	[more]
A0A067F4E1_CITSI	6.9e-26	34.56	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g039797mg PE=4 SV=1	[more]
B9H642_POPTR	1.2e-25	32.13	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s10120g PE=4 SV=2	[more]

BLAST of CSPI03G33980 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G36650.1	7.1e-22	29.55	unknown protein	[more]

BLAST of CSPI03G33980 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449440455\|ref\|XP_004138000.1\|	1.4e-173	99.70	PREDICTED: interaptin [Cucumis sativus]	[more]
gi\|659084218\|ref\|XP_008442774.1\|	2.4e-149	88.43	PREDICTED: trichohyalin [Cucumis melo]	[more]
gi\|802687971\|ref\|XP_012082523.1\|	6.0e-31	35.10	PREDICTED: protein CHUP1, chloroplastic [Jatropha curcas]	[more]
gi\|590631387\|ref\|XP_007027548.1\|	7.9e-31	32.93	Uncharacterized protein TCM_022371 [Theobroma cacao]	[more]
gi\|470139277\|ref\|XP_004305377.1\|	3.9e-30	37.09	PREDICTED: protein CHUP1, chloroplastic [Fragaria vesca subsp. vesca]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0009772	photosynthetic electron transport in photosystem II
biological_process	GO:0006464	cellular protein modification process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009523	photosystem II
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016853	isomerase activity
molecular_function	GO:0000166	nucleotide binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G33980.1	CSPI03G33980.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 208..235 score: -coord: 80..100 score: -coord: 159..200 score: -coord: 250..284 scor
None	No IPR available	PANTHER	PTHR31342	FAMILY NOT NAMED	coord: 1..270 score: 1.7
None	No IPR available	PANTHER	PTHR31342:SF10	SUBFAMILY NOT NAMED	coord: 1..270 score: 1.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI03G33980	Cla017747	Watermelon (97103) v1	cpiwmB199
CSPI03G33980	Csa3G748180	Cucumber (Chinese Long) v2	cpicuB120
CSPI03G33980	MELO3C009416	Melon (DHL92) v3.5.1	cpimeB216
CSPI03G33980	MELO3C009416.2	Melon (DHL92) v3.6.1	cpimedB210
CSPI03G33980	CsaV3_3G036620	Cucumber (Chinese Long) v3	cpicucB144
CSPI03G33980	Cla97C10G202650	Watermelon (97103) v2	cpiwmbB190
CSPI03G33980	Bhi11G001700	Wax gourd	cpiwgoB237
CSPI03G33980	Cucsa.378740	Cucumber (Gy14) v1	cgycpiB558
CSPI03G33980	CmaCh06G004290	Cucurbita maxima (Rimu)	cmacpiB827
CSPI03G33980	CmaCh14G002540	Cucurbita maxima (Rimu)	cmacpiB242
CSPI03G33980	CmoCh14G002450	Cucurbita moschata (Rifu)	cmocpiB230
CSPI03G33980	CmoCh06G004240	Cucurbita moschata (Rifu)	cmocpiB815
CSPI03G33980	Cp4.1LG03g01220	Cucurbita pepo (Zucchini)	cpecpiB600
CSPI03G33980	Cp4.1LG08g10560	Cucurbita pepo (Zucchini)	cpecpiB862
CSPI03G33980	CsGy3G031800	Cucumber (Gy14) v2	cgybcpiB110
CSPI03G33980	Carg03723	Silver-seed gourd	carcpiB0281

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI03G33980	Watermelon (97103) v2	cpiwmbB207
CSPI03G33980	Wax gourd	cpiwgoB332
CSPI03G33980	Wild cucumber (PI 183967)	cpicpiB124
CSPI03G33980	Cucumber (Gy14) v1	cgycpiB167
CSPI03G33980	Cucurbita maxima (Rimu)	cmacpiB873
CSPI03G33980	Cucurbita moschata (Rifu)	cmocpiB853
CSPI03G33980	Cucumber (Chinese Long) v2	cpicuB148
CSPI03G33980	Melon (DHL92) v3.5.1	cpimeB257
CSPI03G33980	Watermelon (Charleston Gray)	cpiwcgB196
CSPI03G33980	Watermelon (Charleston Gray)	cpiwcgB224
CSPI03G33980	Watermelon (97103) v1	cpiwmB266
CSPI03G33980	Cucurbita pepo (Zucchini)	cpecpiB481
CSPI03G33980	Bottle gourd (USVL1VR-Ls)	cpilsiB167
CSPI03G33980	Bottle gourd (USVL1VR-Ls)	cpilsiB185
CSPI03G33980	Melon (DHL92) v3.6.1	cpimedB253
CSPI03G33980	Cucumber (Gy14) v2	cgybcpiB263
CSPI03G33980	Silver-seed gourd	carcpiB0181
CSPI03G33980	Cucumber (Chinese Long) v3	cpicucB176