CSPI03G33020 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G33020
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr3 : 29266756 .. 29267127 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGTACAGATTGATTGAAAATGTGAGACAATGCCTGGATCAGAGGATTCAAGTCTTGAAAGTCAAACCAGAACTTCCATTCAAATTTCTATTGTGCAGTTTCACATTAGAAACAGCTTGTGTGCCAAATCAAAATGTGTACAGCTCCAGTAACAAAATCCAACTATATTATAGTGTCATTATTGATGTAAGAACATGCTTGCTACATCTCTTACCGGACATTCATCGAGCACCTGGCGTGCAACATGTCAACATCGATGAAATTACAGAAACGGCGCAAATATTAATACATCACATAAGTTTCTTTGAATTACAATGCCAAAACAATATTCAGAGCCTTAGACGCCTACATCAAGAGGAGGATACTTGA

mRNA sequence

ATGACGTACAGATTGATTGAAAATGTGAGACAATGCCTGGATCAGAGGATTCAAGTCTTGAAAGTCAAACCAGAACTTCCATTCAAATTTCTATTGTGCAGTTTCACATTAGAAACAGCTTGTGTGCCAAATCAAAATGTGTACAGCTCCAGTAACAAAATCCAACTATATTATAGTGTCATTATTGATGTAAGAACATGCTTGCTACATCTCTTACCGGACATTCATCGAGCACCTGGCGTGCAACATGTCAACATCGATGAAATTACAGAAACGGCGCAAATATTAATACATCACATAAGTTTCTTTGAATTACAATGCCAAAACAATATTCAGAGCCTTAGACGCCTACATCAAGAGGAGGATACTTGA

Coding sequence (CDS)

ATGACGTACAGATTGATTGAAAATGTGAGACAATGCCTGGATCAGAGGATTCAAGTCTTGAAAGTCAAACCAGAACTTCCATTCAAATTTCTATTGTGCAGTTTCACATTAGAAACAGCTTGTGTGCCAAATCAAAATGTGTACAGCTCCAGTAACAAAATCCAACTATATTATAGTGTCATTATTGATGTAAGAACATGCTTGCTACATCTCTTACCGGACATTCATCGAGCACCTGGCGTGCAACATGTCAACATCGATGAAATTACAGAAACGGCGCAAATATTAATACATCACATAAGTTTCTTTGAATTACAATGCCAAAACAATATTCAGAGCCTTAGACGCCTACATCAAGAGGAGGATACTTGA
Homology
[Close]
BLAST of CSPI03G33020 vs. TrEMBL
Match: A0A0A0LAV5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G736905 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 1.3e-62
Identity = 121/123 (98.37%), Postives = 122/123 (99.19%), Query Frame = 1 

Query: 1   MTYRLIENVRQCLDQRIQVLKVKPELPFKFLLCSFTLETACVPNQNVYSSSNKIQLYYSV 60
           MTYRLIENVRQCLDQRIQVLKVKPELPFKFLLCSFTLETACVPNQNVYSSSNKIQLYYSV
Sbjct: 1   MTYRLIENVRQCLDQRIQVLKVKPELPFKFLLCSFTLETACVPNQNVYSSSNKIQLYYSV 60

Query: 61  IIDVRTCLLHLLPDIHRAPGVQHVNIDEITETAQILIHHISFFELQCQNNIQSLRRLHQE 120
           IIDVRTCLLHLL DIHRAPGVQHVNID+ITETAQILIHHISFFELQCQNNIQSLRRLHQE
Sbjct: 61  IIDVRTCLLHLLADIHRAPGVQHVNIDKITETAQILIHHISFFELQCQNNIQSLRRLHQE 120

Query: 121 EDT 124
           EDT
Sbjct: 121 EDT 123

[Close]
BLAST of CSPI03G33020 vs. NCBI nr
Match: gi|700203810|gb|KGN58943.1| (hypothetical protein Csa_3G736905 [Cucumis sativus])

HSP 1 Score: 246.9 bits (629), Expect = 1.9e-62
Identity = 121/123 (98.37%), Postives = 122/123 (99.19%), Query Frame = 1 

Query: 1   MTYRLIENVRQCLDQRIQVLKVKPELPFKFLLCSFTLETACVPNQNVYSSSNKIQLYYSV 60
           MTYRLIENVRQCLDQRIQVLKVKPELPFKFLLCSFTLETACVPNQNVYSSSNKIQLYYSV
Sbjct: 1   MTYRLIENVRQCLDQRIQVLKVKPELPFKFLLCSFTLETACVPNQNVYSSSNKIQLYYSV 60

Query: 61  IIDVRTCLLHLLPDIHRAPGVQHVNIDEITETAQILIHHISFFELQCQNNIQSLRRLHQE 120
           IIDVRTCLLHLL DIHRAPGVQHVNID+ITETAQILIHHISFFELQCQNNIQSLRRLHQE
Sbjct: 61  IIDVRTCLLHLLADIHRAPGVQHVNIDKITETAQILIHHISFFELQCQNNIQSLRRLHQE 120

Query: 121 EDT 124
           EDT
Sbjct: 121 EDT 123

The following BLAST results are available for this feature:
BLAST of CSPI03G33020 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI03G33020 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LAV5_CUCSA1.3e-6298.37Uncharacterized protein OS=Cucumis sativus GN=Csa_3G736905 PE=4 SV=1[more]
BLAST of CSPI03G33020 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI03G33020 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700203810|gb|KGN58943.1|1.9e-6298.37hypothetical protein Csa_3G736905 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G33020.1CSPI03G33020.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI03G33020CsaV3_3G035630Cucumber (Chinese Long) v3cpicucB144
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI03G33020Cucurbita maxima (Rimu)cmacpiB242
CSPI03G33020Cucurbita maxima (Rimu)cmacpiB551
CSPI03G33020Cucurbita maxima (Rimu)cmacpiB602
CSPI03G33020Cucurbita maxima (Rimu)cmacpiB668
CSPI03G33020Cucurbita maxima (Rimu)cmacpiB827
CSPI03G33020Cucurbita maxima (Rimu)cmacpiB873
CSPI03G33020Cucurbita moschata (Rifu)cmocpiB230
CSPI03G33020Cucurbita moschata (Rifu)cmocpiB541
CSPI03G33020Cucurbita moschata (Rifu)cmocpiB594
CSPI03G33020Cucurbita moschata (Rifu)cmocpiB660
CSPI03G33020Cucurbita moschata (Rifu)cmocpiB815
CSPI03G33020Cucurbita moschata (Rifu)cmocpiB853
CSPI03G33020Cucumber (Chinese Long) v2cpicuB120
CSPI03G33020Melon (DHL92) v3.5.1cpimeB175
CSPI03G33020Melon (DHL92) v3.5.1cpimeB216
CSPI03G33020Melon (DHL92) v3.5.1cpimeB225
CSPI03G33020Watermelon (Charleston Gray)cpiwcgB196
CSPI03G33020Watermelon (Charleston Gray)cpiwcgB214
CSPI03G33020Watermelon (Charleston Gray)cpiwcgB224
CSPI03G33020Watermelon (97103) v1cpiwmB199
CSPI03G33020Watermelon (97103) v1cpiwmB266
CSPI03G33020Watermelon (97103) v1cpiwmB268
CSPI03G33020Cucurbita pepo (Zucchini)cpecpiB060
CSPI03G33020Cucurbita pepo (Zucchini)cpecpiB279
CSPI03G33020Cucurbita pepo (Zucchini)cpecpiB481
CSPI03G33020Cucurbita pepo (Zucchini)cpecpiB600
CSPI03G33020Cucurbita pepo (Zucchini)cpecpiB862
CSPI03G33020Bottle gourd (USVL1VR-Ls)cpilsiB160
CSPI03G33020Bottle gourd (USVL1VR-Ls)cpilsiB167
CSPI03G33020Bottle gourd (USVL1VR-Ls)cpilsiB185
CSPI03G33020Melon (DHL92) v3.6.1cpimedB166
CSPI03G33020Melon (DHL92) v3.6.1cpimedB210
CSPI03G33020Melon (DHL92) v3.6.1cpimedB220
CSPI03G33020Cucumber (Gy14) v2cgybcpiB110
CSPI03G33020Cucumber (Gy14) v2cgybcpiB217
CSPI03G33020Silver-seed gourdcarcpiB0181
CSPI03G33020Silver-seed gourdcarcpiB0281
CSPI03G33020Silver-seed gourdcarcpiB0366
CSPI03G33020Silver-seed gourdcarcpiB0583
CSPI03G33020Cucumber (Chinese Long) v3cpicucB173
CSPI03G33020Watermelon (97103) v2cpiwmbB190
CSPI03G33020Watermelon (97103) v2cpiwmbB200
CSPI03G33020Watermelon (97103) v2cpiwmbB207
CSPI03G33020Wax gourdcpiwgoB237
CSPI03G33020Wax gourdcpiwgoB325
CSPI03G33020Wax gourdcpiwgoB328
CSPI03G33020Wild cucumber (PI 183967)cpicpiB122
CSPI03G33020Cucumber (Gy14) v1cgycpiB459