CSPI03G31510 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G31510
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr3 : 28502302 .. 28502625 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAACGAAAGAATGGGGCTTAATTAAGCAACTCTCCGCTGTAGGAAGATTGAAGATGATTGATTCAGTCGGCAGTAAGGCTCAAGTTGAGCGTTTAGATTACGCTCAAATAGACATGTCATTTATATATGGATGCCAAATGAATGATGCACCAGGAACTTTTACCTACCCTTTAGAAAACTTTGGACCCCATAAAAAAACTTTGAAGAATATGCTTACAACTCCTCTTATTCTTGGTTTGCAATTGAAGGGTTTAAGGGAAGATTATGTTTTTTTATATGTGCAAATTGCAACAGGAGAGGAGTTTTGGTTAAAAGATTAA

mRNA sequence

ATGAAAACGAAAGAATGGGGCTTAATTAAGCAACTCTCCGCTGTAGGAAGATTGAAGATGATTGATTCAGTCGGCAGTAAGGCTCAAGTTGAGCGTTTAGATTACGCTCAAATAGACATGTCATTTATATATGGATGCCAAATGAATGATGCACCAGGAACTTTTACCTACCCTTTAGAAAACTTTGGACCCCATAAAAAAACTTTGAAGAATATGCTTACAACTCCTCTTATTCTTGGTTTGCAATTGAAGGGTTTAAGGGAAGATTATGTTTTTTTATATGTGCAAATTGCAACAGGAGAGGAGTTTTGGTTAAAAGATTAA

Coding sequence (CDS)

ATGAAAACGAAAGAATGGGGCTTAATTAAGCAACTCTCCGCTGTAGGAAGATTGAAGATGATTGATTCAGTCGGCAGTAAGGCTCAAGTTGAGCGTTTAGATTACGCTCAAATAGACATGTCATTTATATATGGATGCCAAATGAATGATGCACCAGGAACTTTTACCTACCCTTTAGAAAACTTTGGACCCCATAAAAAAACTTTGAAGAATATGCTTACAACTCCTCTTATTCTTGGTTTGCAATTGAAGGGTTTAAGGGAAGATTATGTTTTTTTATATGTGCAAATTGCAACAGGAGAGGAGTTTTGGTTAAAAGATTAA
Homology
[Close]
BLAST of CSPI03G31510 vs. TrEMBL
Match: A0A0A0LDH1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G732450 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 2.3e-55
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 1 

Query: 1   MKTKEWGLIKQLSAVGRLKMIDSVGSKAQVERLDYAQIDMSFIYGCQMNDAPGTFTYPLE 60
           MKTKEWGLIKQLSAVGRLKMIDSVGSKAQVERLDYAQIDMSFIYGCQMNDAPGTFTYPLE
Sbjct: 1   MKTKEWGLIKQLSAVGRLKMIDSVGSKAQVERLDYAQIDMSFIYGCQMNDAPGTFTYPLE 60

Query: 61  NFGPHKKTLKNMLTTPLILGLQLKGLREDYVFLYVQIATGEEFWLKD 108
           NFGPHKKTLKNMLTTPLILGLQLKGLREDYVFLYVQIATGEEFWLKD
Sbjct: 61  NFGPHKKTLKNMLTTPLILGLQLKGLREDYVFLYVQIATGEEFWLKD 107

[Close]
BLAST of CSPI03G31510 vs. NCBI nr
Match: gi|700203654|gb|KGN58787.1| (hypothetical protein Csa_3G732450 [Cucumis sativus])

HSP 1 Score: 222.6 bits (566), Expect = 3.3e-55
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 1 

Query: 1   MKTKEWGLIKQLSAVGRLKMIDSVGSKAQVERLDYAQIDMSFIYGCQMNDAPGTFTYPLE 60
           MKTKEWGLIKQLSAVGRLKMIDSVGSKAQVERLDYAQIDMSFIYGCQMNDAPGTFTYPLE
Sbjct: 1   MKTKEWGLIKQLSAVGRLKMIDSVGSKAQVERLDYAQIDMSFIYGCQMNDAPGTFTYPLE 60

Query: 61  NFGPHKKTLKNMLTTPLILGLQLKGLREDYVFLYVQIATGEEFWLKD 108
           NFGPHKKTLKNMLTTPLILGLQLKGLREDYVFLYVQIATGEEFWLKD
Sbjct: 61  NFGPHKKTLKNMLTTPLILGLQLKGLREDYVFLYVQIATGEEFWLKD 107

The following BLAST results are available for this feature:
BLAST of CSPI03G31510 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI03G31510 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LDH1_CUCSA2.3e-55100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G732450 PE=4 SV=1[more]
BLAST of CSPI03G31510 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI03G31510 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700203654|gb|KGN58787.1|3.3e-55100.00hypothetical protein Csa_3G732450 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G31510.1CSPI03G31510.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI03G31510Csa3G732450Cucumber (Chinese Long) v2cpicuB120
CSPI03G31510ClCG10G021900Watermelon (Charleston Gray)cpiwcgB196
CSPI03G31510CsaV3_3G034090Cucumber (Chinese Long) v3cpicucB144
CSPI03G31510Cla97C10G205140Watermelon (97103) v2cpiwmbB190
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI03G31510Melon (DHL92) v3.6.1cpimedB163
CSPI03G31510Melon (DHL92) v3.6.1cpimedB173
CSPI03G31510Melon (DHL92) v3.6.1cpimedB190
CSPI03G31510Melon (DHL92) v3.6.1cpimedB210
CSPI03G31510Silver-seed gourdcarcpiB0293
CSPI03G31510Cucumber (Gy14) v2cgybcpiB022
CSPI03G31510Cucumber (Gy14) v2cgybcpiB110
CSPI03G31510Cucumber (Gy14) v2cgybcpiB165
CSPI03G31510Cucumber (Gy14) v2cgybcpiB214
CSPI03G31510Cucumber (Gy14) v2cgybcpiB271
CSPI03G31510Silver-seed gourdcarcpiB0019
CSPI03G31510Silver-seed gourdcarcpiB0181
CSPI03G31510Silver-seed gourdcarcpiB0478
CSPI03G31510Silver-seed gourdcarcpiB0590
CSPI03G31510Silver-seed gourdcarcpiB1035
CSPI03G31510Cucumber (Chinese Long) v3cpicucB130
CSPI03G31510Cucumber (Chinese Long) v3cpicucB159
CSPI03G31510Cucumber (Chinese Long) v3cpicucB168
CSPI03G31510Cucumber (Chinese Long) v3cpicucB186
CSPI03G31510Watermelon (97103) v2cpiwmbB196
CSPI03G31510Watermelon (97103) v2cpiwmbB204
CSPI03G31510Watermelon (97103) v2cpiwmbB207
CSPI03G31510Watermelon (97103) v2cpiwmbB254
CSPI03G31510Wax gourdcpiwgoB219
CSPI03G31510Wax gourdcpiwgoB316
CSPI03G31510Wax gourdcpiwgoB331
CSPI03G31510Wax gourdcpiwgoB336
CSPI03G31510Wax gourdcpiwgoB338
CSPI03G31510Wild cucumber (PI 183967)cpicpiB019
CSPI03G31510Wild cucumber (PI 183967)cpicpiB106
CSPI03G31510Wild cucumber (PI 183967)cpicpiB120
CSPI03G31510Wild cucumber (PI 183967)cpicpiB134
CSPI03G31510Cucumber (Gy14) v1cgycpiB054
CSPI03G31510Cucumber (Gy14) v1cgycpiB193
CSPI03G31510Cucumber (Gy14) v1cgycpiB215
CSPI03G31510Cucumber (Gy14) v1cgycpiB278
CSPI03G31510Cucurbita maxima (Rimu)cmacpiB242
CSPI03G31510Cucurbita maxima (Rimu)cmacpiB291
CSPI03G31510Cucurbita maxima (Rimu)cmacpiB465
CSPI03G31510Cucurbita maxima (Rimu)cmacpiB665
CSPI03G31510Cucurbita maxima (Rimu)cmacpiB709
CSPI03G31510Cucurbita maxima (Rimu)cmacpiB827
CSPI03G31510Cucurbita maxima (Rimu)cmacpiB873
CSPI03G31510Cucurbita moschata (Rifu)cmocpiB214
CSPI03G31510Cucurbita moschata (Rifu)cmocpiB230
CSPI03G31510Cucurbita moschata (Rifu)cmocpiB281
CSPI03G31510Cucurbita moschata (Rifu)cmocpiB452
CSPI03G31510Cucurbita moschata (Rifu)cmocpiB657
CSPI03G31510Cucurbita moschata (Rifu)cmocpiB815
CSPI03G31510Cucumber (Chinese Long) v2cpicuB105
CSPI03G31510Cucumber (Chinese Long) v2cpicuB132
CSPI03G31510Cucumber (Chinese Long) v2cpicuB146
CSPI03G31510Cucumber (Chinese Long) v2cpicuB157
CSPI03G31510Melon (DHL92) v3.5.1cpimeB173
CSPI03G31510Melon (DHL92) v3.5.1cpimeB180
CSPI03G31510Melon (DHL92) v3.5.1cpimeB196
CSPI03G31510Melon (DHL92) v3.5.1cpimeB216
CSPI03G31510Watermelon (Charleston Gray)cpiwcgB202
CSPI03G31510Watermelon (Charleston Gray)cpiwcgB220
CSPI03G31510Watermelon (Charleston Gray)cpiwcgB224
CSPI03G31510Watermelon (Charleston Gray)cpiwcgB268
CSPI03G31510Watermelon (97103) v1cpiwmB199
CSPI03G31510Watermelon (97103) v1cpiwmB212
CSPI03G31510Watermelon (97103) v1cpiwmB230
CSPI03G31510Watermelon (97103) v1cpiwmB266
CSPI03G31510Watermelon (97103) v1cpiwmB276
CSPI03G31510Cucurbita pepo (Zucchini)cpecpiB063
CSPI03G31510Cucurbita pepo (Zucchini)cpecpiB389
CSPI03G31510Cucurbita pepo (Zucchini)cpecpiB390
CSPI03G31510Cucurbita pepo (Zucchini)cpecpiB481
CSPI03G31510Cucurbita pepo (Zucchini)cpecpiB600
CSPI03G31510Cucurbita pepo (Zucchini)cpecpiB862
CSPI03G31510Bottle gourd (USVL1VR-Ls)cpilsiB168
CSPI03G31510Bottle gourd (USVL1VR-Ls)cpilsiB172
CSPI03G31510Bottle gourd (USVL1VR-Ls)cpilsiB183
CSPI03G31510Bottle gourd (USVL1VR-Ls)cpilsiB185
CSPI03G31510Bottle gourd (USVL1VR-Ls)cpilsiB195