CSPI03G28370 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI03G28370
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Nucleoside diphosphate kinase
Location	Chr3 : 25967100 .. 25967985 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGTGAGTTTAATTTTAAACAAATGTTGCATGTGTTTTATCTGTTTGTTTTCTTTTCTTTTCTTTTTCTTGATCTCCTTCTTTTTTTTTTTTTTTTCTGAATAACCCCTTTAATTTTGGTGATTTTGTTTTTGGGTTTCAGTTGTTGAGTTGGATGCAAAGTAAACTCCAAGGAAAAGTAAAATTTCAGAACAAAGGATCATATAATTCTTCAAACCCTTCAAGTAATGTTAATTTGCACTATACTTTAATTTTTTCAAGTAATCAAAAAATATTTACTTTACTACTAACTCATTATTTTACATTACATGATTATGATATATATATATACATATGCCATATCATAAACAAACCAGCTATTGAGCAACCAGCTGAAGAATCCAGTGCTTCCTTGCCTCTTGGGTTACTAGCAATTGGAACTTTTGGCAACAATATTAACGAGTTGAAAGTAGTGAAGACCGATGACGAAAACGCTATCATCGATGCTAAATCTACATTTAATGAAACCGACGATGACAACGACGGTTCTCTTGAAGGTGTCCCCGAATTAGAAGAGGAGTTGGCAAAACTTTGGCAGCAGAACTCTGCACTTCGTGAAGAGGAAAGTGATGACTTTGATGATGACCAAATAGAAGAACAAATTGTGAAAAAGAACGTTGGTTTGGTGGTGAGGGAATGGGAAGGTGATGTTGAGAAAAACAATGATCCTCGCATATCCATTGTGAAGAGATCTGTATCATTTTTGATTAAGAAGATCTTTATATGTGGGAGCGGTTTTGCACCGTTGCCACCGTCGCTACCGCCAAACTTCATGGACAGACCGCAAGACGCAACGATGAAGAAGGTACGTAAACAACCAATAATGTGTTATTTCAAAAGATAA

mRNA sequence

ATGAAGTTGTTGAGTTGGATGCAAAGTAAACTCCAAGGAAAAGTAAAATTTCAGAACAAAGGATCATATAATTCTTCAAACCCTTCAACTATTGAGCAACCAGCTGAAGAATCCAGTGCTTCCTTGCCTCTTGGGTTACTAGCAATTGGAACTTTTGGCAACAATATTAACGAGTTGAAAGTAGTGAAGACCGATGACGAAAACGCTATCATCGATGCTAAATCTACATTTAATGAAACCGACGATGACAACGACGGTTCTCTTGAAGGTGTCCCCGAATTAGAAGAGGAGTTGGCAAAACTTTGGCAGCAGAACTCTGCACTTCGTGAAGAGGAAAGTGATGACTTTGATGATGACCAAATAGAAGAACAAATTGTGAAAAAGAACGTTGGTTTGGTGGTGAGGGAATGGGAAGGTGATGTTGAGAAAAACAATGATCCTCGCATATCCATTGTGAAGAGATCTGTATCATTTTTGATTAAGAAGATCTTTATATGTGGGAGCGGTTTTGCACCGTTGCCACCGTCGCTACCGCCAAACTTCATGGACAGACCGCAAGACGCAACGATGAAGAAGGTACGTAAACAACCAATAATGTGTTATTTCAAAAGATAA

Coding sequence (CDS)

ATGAAGTTGTTGAGTTGGATGCAAAGTAAACTCCAAGGAAAAGTAAAATTTCAGAACAAAGGATCATATAATTCTTCAAACCCTTCAACTATTGAGCAACCAGCTGAAGAATCCAGTGCTTCCTTGCCTCTTGGGTTACTAGCAATTGGAACTTTTGGCAACAATATTAACGAGTTGAAAGTAGTGAAGACCGATGACGAAAACGCTATCATCGATGCTAAATCTACATTTAATGAAACCGACGATGACAACGACGGTTCTCTTGAAGGTGTCCCCGAATTAGAAGAGGAGTTGGCAAAACTTTGGCAGCAGAACTCTGCACTTCGTGAAGAGGAAAGTGATGACTTTGATGATGACCAAATAGAAGAACAAATTGTGAAAAAGAACGTTGGTTTGGTGGTGAGGGAATGGGAAGGTGATGTTGAGAAAAACAATGATCCTCGCATATCCATTGTGAAGAGATCTGTATCATTTTTGATTAAGAAGATCTTTATATGTGGGAGCGGTTTTGCACCGTTGCCACCGTCGCTACCGCCAAACTTCATGGACAGACCGCAAGACGCAACGATGAAGAAGGTACGTAAACAACCAATAATGTGTTATTTCAAAAGATAA

Homology

[Close]

BLAST of CSPI03G28370 vs. TrEMBL
Match: A0A0A0L9D5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G645860 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 7.8e-97
Identity = 195/242 (80.58%), Postives = 196/242 (80.99%), Query Frame = 1


Query: 7   MQSKLQGKVKFQNKGSYNSSNPST------------------------------------ 66
           MQSKLQGKVKFQNKGSYNSSNPS+                                    
Sbjct: 1   MQSKLQGKVKFQNKGSYNSSNPSSNVNLHYTLIFSSNQKIFTLLLTHYFTLHDYDIYIYI 60

Query: 67  --------IEQPAEESSASLPLGLLAIGTFGNNINELKVVKTDDENAIIDAKSTFNETDD 126
                   IEQPAEESSASLPLGLLAIGTFGNNINELKVVKTDDENAIIDAKST NETDD
Sbjct: 61  CHIINKPAIEQPAEESSASLPLGLLAIGTFGNNINELKVVKTDDENAIIDAKSTLNETDD 120

Query: 127 DNDGSLEGVPELEEELAKLWQQNSALREEESDDFDDDQIEEQIVKKNVGLVVREWEGDVE 186
           DNDGSLEGVPELEEELAKLWQQNSALREEESDDFDDDQIEEQIVKKNVGLVVREWEGDVE
Sbjct: 121 DNDGSLEGVPELEEELAKLWQQNSALREEESDDFDDDQIEEQIVKKNVGLVVREWEGDVE 180

Query: 187 KNNDPRISIVKRSVSFLIKKIFICGSGFAPLPPSLPPNFMDRPQDATMKKVRKQPIMCYF 205
           KNNDPRISIVKRSVSFLIKKIFICGSGFAPLPPS PPNFMDRPQDATMKKVRKQPIMCYF
Sbjct: 181 KNNDPRISIVKRSVSFLIKKIFICGSGFAPLPPSPPPNFMDRPQDATMKKVRKQPIMCYF 240

[Close]

BLAST of CSPI03G28370 vs. TrEMBL
Match: B9GVZ2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s06620g PE=4 SV=2)

HSP 1 Score: 84.7 bits (208), Expect = 1.4e-13
Identity = 67/218 (30.73%), Postives = 111/218 (50.92%), Query Frame = 1


Query: 1   MKLLSWMQSKLQGKVKFQNKGSYNSSNPSTIEQPAEESSASLPLGLLAIGTFGNNINELK 60
           MKL SWMQ+K+ GK     K +   S    ++Q + E  +  P GLLAIGTFGN  NEL+
Sbjct: 1   MKLFSWMQNKINGKQGNCRKPNTVLSATQHVKQESREEFSDWPHGLLAIGTFGN--NELR 60

Query: 61  VVKTDDENAIIDAKSTFNETDDDNDGSLEGVPELEEELAKLWQQNSALREEESD------ 120
                D N I D +   + +DD  D + E + +L++EL +L  +  + +++E +      
Sbjct: 61  -----DNNEIQDVEEDPSPSDDLQDFTPEEIGKLQKELTELLTRKPSSQDKEKEIANLPL 120

Query: 121 -------------------DFDDDQIEEQIVKKNVGLVVREWEGDVEKNNDPRISIVKRS 180
                                 D    E  +++ + +++   + D+ +NN+ + +I KRS
Sbjct: 121 DRFLNCPSSLEVDRRISNTVISDVDNHEDDIERTISVILGRCK-DICENNNKKKAIGKRS 180

Query: 181 VSFLIKKIFICGSGFAPLPPSLPPNFMDRPQDATMKKV 194
           +SFL+KKIF+C SGFAP      P+  D   ++ M+K+
Sbjct: 181 ISFLLKKIFVCTSGFAP-----QPSLRDTLHESRMEKL 205

[Close]

BLAST of CSPI03G28370 vs. TrEMBL
Match: V7AQ11_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G128000g PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.1e-13
Identity = 72/221 (32.58%), Postives = 118/221 (53.39%), Query Frame = 1


Query: 1   MKLLSWMQSKLQGKVKFQNKGSYNSSNPSTIEQPAEESSASLPLGLLAIGTFGNNINELK 60
           MK LSWMQ+KL GK   +   ++ ++     ++P EE S   P GLLAIGTFGNN +E+K
Sbjct: 1   MKFLSWMQNKLGGKQDNRKPNTHTTATYHAKQEPREEFS-DWPHGLLAIGTFGNN-SEIK 60

Query: 61  VVKTDDENAIIDAKSTFNETDDDNDGSLEGVPELEEELAKLWQQNSALREE--------- 120
              +DD+NA  D  S+    ++  D + E +  L++EL KL ++   + +E         
Sbjct: 61  E-NSDDQNAQEDPSSS----EEIADFTPEEIGNLQKELTKLLRRKPNVEKEISELPLDRF 120

Query: 121 -------------------ESDDFDDDQIEEQIVKKNVGLVVREWEGDVEKNNDPRISIV 180
                              ESDD ++D      ++K + +++ + + D+  +N  + +I 
Sbjct: 121 LNCPSSLEVDRRISNALCSESDDKEED------IEKTLSVIIDKCK-DICAHNRKK-TIG 180

Query: 181 KRSVSFLIKKIFICGSGFAPLPPSLPPNFMDRPQDATMKKV 194
           K+S+SFL+KKIF+C SGFAP      P+  D  Q++ M+K+
Sbjct: 181 KKSISFLLKKIFVCRSGFAP-----TPSLRDTLQESRMEKL 201

[Close]

BLAST of CSPI03G28370 vs. TrEMBL
Match: U5GQ24_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s16690g PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.0e-11
Identity = 64/218 (29.36%), Postives = 112/218 (51.38%), Query Frame = 1


Query: 1   MKLLSWMQSKLQGKVKFQNKGSYNSSNPSTIEQPAEESSASLPLGLLAIGTFGN-NINEL 60
           MKL SWMQ+KL GK     K +   S    ++Q + E  +  P GLLAIGTFGN  + E 
Sbjct: 1   MKLFSWMQNKLNGKQGNNTKPNAVISATRHVKQESREEFSDWPHGLLAIGTFGNKELGES 60

Query: 61  KVVKTDDENAIIDAKSTFNETDDDNDGSLEGVPELEEELAKLWQQNSALREEESDDFD-- 120
             ++  +E+ +++     + + D  D + E + +L++EL KL  +    +++E +  +  
Sbjct: 61  NEIQDAEEDQLVEEDP--SSSHDLQDFTPEEIGKLQKELTKLLTRKPTSQDKEKETANLP 120

Query: 121 ---------DDQIEEQIVKKNVGLVVREWEGDVEK-------------NNDPRISIVKRS 180
                      +++ ++    +G  V + E D+E+              N+ + +I K+S
Sbjct: 121 LDRFLNCPSSLEVDRRVSNTAIG-DVDDKEDDIERTISVILGRCKDICENNKKKAIGKKS 180

Query: 181 VSFLIKKIFICGSGFAPLPPSLPPNFMDRPQDATMKKV 194
           +SFL+KKIF+C SGFAP      P+  D  Q++ M+K+
Sbjct: 181 ISFLLKKIFVCRSGFAP-----QPSLRDTLQESRMEKL 210

[Close]

BLAST of CSPI03G28370 vs. TrEMBL
Match: K7KH89_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_03G264200 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 8.5e-11
Identity = 68/214 (31.78%), Postives = 106/214 (49.53%), Query Frame = 1


Query: 1   MKLLSWMQSKLQGKVKFQNKGSYNSSNPSTIEQPAEESSASLPLGLLAIGTFGNNINELK 60
           M+ LSWMQ+K+ GK   +   +Y ++N + + +   E  +  P GLLAIGTFGNN NE+K
Sbjct: 1   MQFLSWMQNKIGGKQDIRKPNTYTATNDAKLVR--REELSDWPDGLLAIGTFGNN-NEVK 60

Query: 61  VVKTDDENAIIDAKSTFNETDDDNDGSLEGVPELEEELAKLWQQNSALREEE-------- 120
             +  ++N + +  S+  E  D      E + +L++EL KL +Q   + E+E        
Sbjct: 61  --EKTEKNILREDPSSSEEIADFTP---EEIGKLKKELTKLLRQKPNIVEKEIAELPLDR 120

Query: 121 -------------------SDDFDDDQIEEQIVKKNVGLVVREWEGDVEKN--------- 175
                              SD  D D+ EE+  ++       E E D+EK          
Sbjct: 121 FLNCPSSLEVDRRISNVLGSDSEDKDKDEEKEEERE----KEEEEEDIEKTLSVILGKFK 180

[Close]

BLAST of CSPI03G28370 vs. NCBI nr
Match: gi|778682434|ref|XP_011651713.1| (PREDICTED: uncharacterized protein LOC105434935 [Cucumis sativus])

HSP 1 Score: 370.9 bits (951), Expect = 1.4e-99
Identity = 190/193 (98.45%), Postives = 191/193 (98.96%), Query Frame = 1


Query: 1   MKLLSWMQSKLQGKVKFQNKGSYNSSNPSTIEQPAEESSASLPLGLLAIGTFGNNINELK 60
           MKLLSWMQSKLQGKVKFQNKGSYNSSNPSTIEQPAEESSASLPLGLLAIGTFGNNINELK
Sbjct: 1   MKLLSWMQSKLQGKVKFQNKGSYNSSNPSTIEQPAEESSASLPLGLLAIGTFGNNINELK 60

Query: 61  VVKTDDENAIIDAKSTFNETDDDNDGSLEGVPELEEELAKLWQQNSALREEESDDFDDDQ 120
           VVKTDDENAIIDAKST NETDDDNDGSLEGVPELEEELAKLWQQNSALREEESDDFDDDQ
Sbjct: 61  VVKTDDENAIIDAKSTLNETDDDNDGSLEGVPELEEELAKLWQQNSALREEESDDFDDDQ 120

Query: 121 IEEQIVKKNVGLVVREWEGDVEKNNDPRISIVKRSVSFLIKKIFICGSGFAPLPPSLPPN 180
           IEEQIVKKNVGLVVREWEGDVEKNNDPRISIVKRSVSFLIKKIFICGSGFAPLPPS PPN
Sbjct: 121 IEEQIVKKNVGLVVREWEGDVEKNNDPRISIVKRSVSFLIKKIFICGSGFAPLPPSPPPN 180

Query: 181 FMDRPQDATMKKV 194
           FMDRPQDATMKK+
Sbjct: 181 FMDRPQDATMKKM 193

[Close]

BLAST of CSPI03G28370 vs. NCBI nr
Match: gi|700203315|gb|KGN58448.1| (hypothetical protein Csa_3G645860 [Cucumis sativus])

HSP 1 Score: 361.3 bits (926), Expect = 1.1e-96
Identity = 195/242 (80.58%), Postives = 196/242 (80.99%), Query Frame = 1


Query: 7   MQSKLQGKVKFQNKGSYNSSNPST------------------------------------ 66
           MQSKLQGKVKFQNKGSYNSSNPS+                                    
Sbjct: 1   MQSKLQGKVKFQNKGSYNSSNPSSNVNLHYTLIFSSNQKIFTLLLTHYFTLHDYDIYIYI 60

Query: 67  --------IEQPAEESSASLPLGLLAIGTFGNNINELKVVKTDDENAIIDAKSTFNETDD 126
                   IEQPAEESSASLPLGLLAIGTFGNNINELKVVKTDDENAIIDAKST NETDD
Sbjct: 61  CHIINKPAIEQPAEESSASLPLGLLAIGTFGNNINELKVVKTDDENAIIDAKSTLNETDD 120

Query: 127 DNDGSLEGVPELEEELAKLWQQNSALREEESDDFDDDQIEEQIVKKNVGLVVREWEGDVE 186
           DNDGSLEGVPELEEELAKLWQQNSALREEESDDFDDDQIEEQIVKKNVGLVVREWEGDVE
Sbjct: 121 DNDGSLEGVPELEEELAKLWQQNSALREEESDDFDDDQIEEQIVKKNVGLVVREWEGDVE 180

Query: 187 KNNDPRISIVKRSVSFLIKKIFICGSGFAPLPPSLPPNFMDRPQDATMKKVRKQPIMCYF 205
           KNNDPRISIVKRSVSFLIKKIFICGSGFAPLPPS PPNFMDRPQDATMKKVRKQPIMCYF
Sbjct: 181 KNNDPRISIVKRSVSFLIKKIFICGSGFAPLPPSPPPNFMDRPQDATMKKVRKQPIMCYF 240

[Close]

BLAST of CSPI03G28370 vs. NCBI nr
Match: gi|659120699|ref|XP_008460313.1| (PREDICTED: uncharacterized protein LOC103499172 [Cucumis melo])

HSP 1 Score: 342.0 bits (876), Expect = 7.0e-91
Identity = 171/193 (88.60%), Postives = 182/193 (94.30%), Query Frame = 1


Query: 1   MKLLSWMQSKLQGKVKFQNKGSYNSSNPSTIEQPAEESSASLPLGLLAIGTFGNNINELK 60
           MKLLSWMQSKLQGKVKFQNKGSYNSSNPSTIEQPAEESSASLPLGLLAIGTFGNN N++K
Sbjct: 1   MKLLSWMQSKLQGKVKFQNKGSYNSSNPSTIEQPAEESSASLPLGLLAIGTFGNNTNDVK 60

Query: 61  VVKTDDENAIIDAKSTFNETDDDNDGSLEGVPELEEELAKLWQQNSALREEESDDFDDDQ 120
           V+KTD ENA+IDAKST NETDDDND SL+ VPELEEEL KLWQQNS  REEESDDFDDDQ
Sbjct: 61  VLKTDVENAVIDAKSTSNETDDDNDSSLKDVPELEEELTKLWQQNSQFREEESDDFDDDQ 120

Query: 121 IEEQIVKKNVGLVVREWEGDVEKNNDPRISIVKRSVSFLIKKIFICGSGFAPLPPSLPPN 180
            EEQ+VKKN+GLVVREW+GDVEKNNDP ISIVKRSV+FL+KKIFICGSGFAPLPPS PPN
Sbjct: 121 TEEQVVKKNIGLVVREWQGDVEKNNDPPISIVKRSVTFLVKKIFICGSGFAPLPPSPPPN 180

Query: 181 FMDRPQDATMKKV 194
           FMDRPQDATMKK+
Sbjct: 181 FMDRPQDATMKKI 193

[Close]

BLAST of CSPI03G28370 vs. NCBI nr
Match: gi|566161231|ref|XP_002304121.2| (hypothetical protein POPTR_0003s06620g [Populus trichocarpa])

HSP 1 Score: 84.7 bits (208), Expect = 2.0e-13
Identity = 67/218 (30.73%), Postives = 111/218 (50.92%), Query Frame = 1


Query: 1   MKLLSWMQSKLQGKVKFQNKGSYNSSNPSTIEQPAEESSASLPLGLLAIGTFGNNINELK 60
           MKL SWMQ+K+ GK     K +   S    ++Q + E  +  P GLLAIGTFGN  NEL+
Sbjct: 1   MKLFSWMQNKINGKQGNCRKPNTVLSATQHVKQESREEFSDWPHGLLAIGTFGN--NELR 60

Query: 61  VVKTDDENAIIDAKSTFNETDDDNDGSLEGVPELEEELAKLWQQNSALREEESD------ 120
                D N I D +   + +DD  D + E + +L++EL +L  +  + +++E +      
Sbjct: 61  -----DNNEIQDVEEDPSPSDDLQDFTPEEIGKLQKELTELLTRKPSSQDKEKEIANLPL 120

Query: 121 -------------------DFDDDQIEEQIVKKNVGLVVREWEGDVEKNNDPRISIVKRS 180
                                 D    E  +++ + +++   + D+ +NN+ + +I KRS
Sbjct: 121 DRFLNCPSSLEVDRRISNTVISDVDNHEDDIERTISVILGRCK-DICENNNKKKAIGKRS 180

Query: 181 VSFLIKKIFICGSGFAPLPPSLPPNFMDRPQDATMKKV 194
           +SFL+KKIF+C SGFAP      P+  D   ++ M+K+
Sbjct: 181 ISFLLKKIFVCTSGFAP-----QPSLRDTLHESRMEKL 205

[Close]

BLAST of CSPI03G28370 vs. NCBI nr
Match: gi|593266486|ref|XP_007135421.1| (hypothetical protein PHAVU_010G128000g [Phaseolus vulgaris])

HSP 1 Score: 83.6 bits (205), Expect = 4.5e-13
Identity = 72/221 (32.58%), Postives = 118/221 (53.39%), Query Frame = 1


Query: 1   MKLLSWMQSKLQGKVKFQNKGSYNSSNPSTIEQPAEESSASLPLGLLAIGTFGNNINELK 60
           MK LSWMQ+KL GK   +   ++ ++     ++P EE S   P GLLAIGTFGNN +E+K
Sbjct: 1   MKFLSWMQNKLGGKQDNRKPNTHTTATYHAKQEPREEFS-DWPHGLLAIGTFGNN-SEIK 60

Query: 61  VVKTDDENAIIDAKSTFNETDDDNDGSLEGVPELEEELAKLWQQNSALREE--------- 120
              +DD+NA  D  S+    ++  D + E +  L++EL KL ++   + +E         
Sbjct: 61  E-NSDDQNAQEDPSSS----EEIADFTPEEIGNLQKELTKLLRRKPNVEKEISELPLDRF 120

Query: 121 -------------------ESDDFDDDQIEEQIVKKNVGLVVREWEGDVEKNNDPRISIV 180
                              ESDD ++D      ++K + +++ + + D+  +N  + +I 
Sbjct: 121 LNCPSSLEVDRRISNALCSESDDKEED------IEKTLSVIIDKCK-DICAHNRKK-TIG 180

Query: 181 KRSVSFLIKKIFICGSGFAPLPPSLPPNFMDRPQDATMKKV 194
           K+S+SFL+KKIF+C SGFAP      P+  D  Q++ M+K+
Sbjct: 181 KKSISFLLKKIFVCRSGFAP-----TPSLRDTLQESRMEKL 201

The following BLAST results are available for this feature:

BLAST of CSPI03G28370 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI03G28370 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9D5_CUCSA	7.8e-97	80.58	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G645860 PE=4 SV=1	[more]
B9GVZ2_POPTR	1.4e-13	30.73	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s06620g PE=4 SV=2	[more]
V7AQ11_PHAVU	3.1e-13	32.58	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G128000g PE=4 SV=1	[more]
U5GQ24_POPTR	1.0e-11	29.36	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s16690g PE=4 SV=1	[more]
K7KH89_SOYBN	8.5e-11	31.78	Uncharacterized protein OS=Glycine max GN=GLYMA_03G264200 PE=4 SV=1	[more]

BLAST of CSPI03G28370 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CSPI03G28370 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778682434\|ref\|XP_011651713.1\|	1.4e-99	98.45	PREDICTED: uncharacterized protein LOC105434935 [Cucumis sativus]	[more]
gi\|700203315\|gb\|KGN58448.1\|	1.1e-96	80.58	hypothetical protein Csa_3G645860 [Cucumis sativus]	[more]
gi\|659120699\|ref\|XP_008460313.1\|	7.0e-91	88.60	PREDICTED: uncharacterized protein LOC103499172 [Cucumis melo]	[more]
gi\|566161231\|ref\|XP_002304121.2\|	2.0e-13	30.73	hypothetical protein POPTR_0003s06620g [Populus trichocarpa]	[more]
gi\|593266486\|ref\|XP_007135421.1\|	4.5e-13	32.58	hypothetical protein PHAVU_010G128000g [Phaseolus vulgaris]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G28370.1	CSPI03G28370.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 91..111 scor
None	No IPR available	PANTHER	PTHR34045	FAMILY NOT NAMED	coord: 1..177 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI03G28370	Cla012533	Watermelon (97103) v1	cpiwmB216
CSPI03G28370	Csa3G645860	Cucumber (Chinese Long) v2	cpicuB120
CSPI03G28370	MELO3C022671	Melon (DHL92) v3.5.1	cpimeB202
CSPI03G28370	ClCG07G014520	Watermelon (Charleston Gray)	cpiwcgB262
CSPI03G28370	Lsi07G006630	Bottle gourd (USVL1VR-Ls)	cpilsiB232
CSPI03G28370	MELO3C022671.2	Melon (DHL92) v3.6.1	cpimedB196
CSPI03G28370	CsaV3_7G034300	Cucumber (Chinese Long) v3	cpicucB197
CSPI03G28370	CsaV3_3G030780	Cucumber (Chinese Long) v3	cpicucB144
CSPI03G28370	Cla97C07G141380	Watermelon (97103) v2	cpiwmbB248
CSPI03G28370	Bhi09G000239	Wax gourd	cpiwgoB352
CSPI03G28370	Bhi01G002265	Wax gourd	cpiwgoB276
CSPI03G28370	CmaCh17G006760	Cucurbita maxima (Rimu)	cmacpiB366
CSPI03G28370	CmaCh14G011980	Cucurbita maxima (Rimu)	cmacpiB245
CSPI03G28370	CmoCh14G012220	Cucurbita moschata (Rifu)	cmocpiB234
CSPI03G28370	Cp4.1LG03g15070	Cucurbita pepo (Zucchini)	cpecpiB603
CSPI03G28370	CsGy3G026330	Cucumber (Gy14) v2	cgybcpiB110
CSPI03G28370	Carg27129	Silver-seed gourd	carcpiB0503
CSPI03G28370	Carg13927	Silver-seed gourd	carcpiB0634

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI03G28370	Cucumber (Chinese Long) v2	cpicuB167
CSPI03G28370	Melon (DHL92) v3.5.1	cpimeB184
CSPI03G28370	Watermelon (Charleston Gray)	cpiwcgB182
CSPI03G28370	Watermelon (97103) v1	cpiwmB187
CSPI03G28370	Cucurbita pepo (Zucchini)	cpecpiB139
CSPI03G28370	Cucurbita pepo (Zucchini)	cpecpiB314
CSPI03G28370	Cucurbita pepo (Zucchini)	cpecpiB561
CSPI03G28370	Bottle gourd (USVL1VR-Ls)	cpilsiB180
CSPI03G28370	Melon (DHL92) v3.6.1	cpimedB179
CSPI03G28370	Cucumber (Gy14) v2	cgybcpiB319
CSPI03G28370	Silver-seed gourd	carcpiB0230
CSPI03G28370	Silver-seed gourd	carcpiB0803
CSPI03G28370	Watermelon (97103) v2	cpiwmbB264
CSPI03G28370	Wild cucumber (PI 183967)	cpicpiB146
CSPI03G28370	Cucumber (Gy14) v1	cgycpiB221
CSPI03G28370	Cucumber (Gy14) v1	cgycpiB533
CSPI03G28370	Cucurbita maxima (Rimu)	cmacpiB450
CSPI03G28370	Cucurbita maxima (Rimu)	cmacpiB905
CSPI03G28370	Cucurbita moschata (Rifu)	cmocpiB438
CSPI03G28370	Cucurbita moschata (Rifu)	cmocpiB885