CSPI03G27600 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI03G27600
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Pectin lyase-like superfamily protein
Location	Chr3 : 25150159 .. 25151630 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCATCCAATTTGAGAAGAGGAGTAGTTCGGCTCTATTGATCGTGTTTGTAGCATTGATAAATTTGTGTACTTTTGGCAATGCATGGTCTTACAATGTTGTTAACTTTGGAGCCAAAGGTGATGGGAGAACTGACTCAACACAAGCATTTCAAACCGTTTGGTCTAATGCTTGTGCCTCCACAAAACCAACCACAATTTATGTCCCACGAGGAAGATATTACCTTCGCTCTGGAACTTTCAACGGACCTTGCAAAAATAATGCTATCTTTATCCGCATTGATGGCACTTTGGTGGCTCCCTCCGACTTTCAAGTTATTGGAAACTCTGCAGCTTGGGTTGTTTTTAGGCACGTTGATGGAGTTACCATCTCAGGCGGCAATCTTGATGGGAAGGGGGCTGGCTTATGGACTTGCAAAAATTCTTCTATTAGCACTACTTGTCCATCTGGTGCCACCGTAAGCAAATATATTAACTAAAATCACAATTCTTCTCAAAATTATTATATTATTATATTTTTTATTTTAAATAAATTCGGTCTTCTCTACTGTATATGCAGACCCTCCAATTCTCTAACTCCAAAAATGTAGTGGTCAGCGCATTAACATCACTCAATAGCCAAATGTTCCATATAGTCATCCATGGTTGTCAAAATGTCATGATGAAAGGCCTTAAGGTCTTGGCCTCTGGCAATAGTCCCAACACAGACGGAATCCATGTGCAAATGTCCACTGATGTGGCCATATTAAACTCCAAAATAGGCACTGGAGATGATTGCATTTCCATTGGTCCTGGTACTTCTAACTTACGTATTGAAAATATTATATGTGGACCTGGTCATGGAATAAGGTAAACTTCTGTGAATTATAAAGTAAATAAATTCTTAATTATAATCATTTTTGTAATAGAATTTGTTGGTTATGATTTGTAGCATTGGGAGTTTAGCAAAGGATCTACAAGAGGATGGAGTCCAAAATGTTACCGTGAAGAATGTTGTATTTTCACGCACTCAAAATGGGGTAAGAATCAAAGCATGGGGCAAGCCTAGCAACGGTTTTGCTAGGAACATTCTTTTCCAACATATTGTAATGGACAATGTCCAAAATCCAATTGTTATCGATCAAAATTATTGTCCAAGCCACAAAGGATGTCCGGAAAAGGTACGAATACTTAATCAATTCAATATGCTCTAATCCTCGATCATATTAATTATTTTATTGATTGAGTGCTAAGTTGTTGTACCATATTATAGGCTTCTGGTGTTAAAATTAACGATGTGACTTATCAAGACATCCATGGAACATCAGCCACTAAAGTAGCAGTAAAGTTTGATTGTAGTCCAATAAATCCATGTGTTCGAATAAAGTTAGAGAATGTAAAACTTACATATATGAATCAAACAGCGCAAGCTACATGCAACAATGTTGGAGGAATTGCAGCAGGTCTTGTTCAACCCACTAGTTGCTTCTAA

mRNA sequence

ATGATCATCCAATTTGAGAAGAGGAGTAGTTCGGCTCTATTGATCGTGTTTGTAGCATTGATAAATTTGTGTACTTTTGGCAATGCATGGTCTTACAATGTTGTTAACTTTGGAGCCAAAGGTGATGGGAGAACTGACTCAACACAAGCATTTCAAACCGTTTGGTCTAATGCTTGTGCCTCCACAAAACCAACCACAATTTATGTCCCACGAGGAAGATATTACCTTCGCTCTGGAACTTTCAACGGACCTTGCAAAAATAATGCTATCTTTATCCGCATTGATGGCACTTTGGTGGCTCCCTCCGACTTTCAAGTTATTGGAAACTCTGCAGCTTGGGTTGTTTTTAGGCACGTTGATGGAGTTACCATCTCAGGCGGCAATCTTGATGGGAAGGGGGCTGGCTTATGGACTTGCAAAAATTCTTCTATTAGCACTACTTGTCCATCTGGTGCCACCACCCTCCAATTCTCTAACTCCAAAAATGTAGTGGTCAGCGCATTAACATCACTCAATAGCCAAATGTTCCATATAGTCATCCATGGTTGTCAAAATGTCATGATGAAAGGCCTTAAGGTCTTGGCCTCTGGCAATAGTCCCAACACAGACGGAATCCATGTGCAAATGTCCACTGATGTGGCCATATTAAACTCCAAAATAGGCACTGGAGATGATTGCATTTCCATTGGTCCTGGTACTTCTAACTTACGTATTGAAAATATTATATGTGGACCTGGTCATGGAATAAGCATTGGGAGTTTAGCAAAGGATCTACAAGAGGATGGAGTCCAAAATGTTACCGTGAAGAATGTTGTATTTTCACGCACTCAAAATGGGGTAAGAATCAAAGCATGGGGCAAGCCTAGCAACGGTTTTGCTAGGAACATTCTTTTCCAACATATTGTAATGGACAATGTCCAAAATCCAATTGTTATCGATCAAAATTATTGTCCAAGCCACAAAGGATGTCCGGAAAAGGCTTCTGGTGTTAAAATTAACGATGTGACTTATCAAGACATCCATGGAACATCAGCCACTAAAGTAGCAGTAAAGTTTGATTGTAGTCCAATAAATCCATGTGTTCGAATAAAGTTAGAGAATGTAAAACTTACATATATGAATCAAACAGCGCAAGCTACATGCAACAATGTTGGAGGAATTGCAGCAGGTCTTGTTCAACCCACTAGTTGCTTCTAA

Coding sequence (CDS)

ATGATCATCCAATTTGAGAAGAGGAGTAGTTCGGCTCTATTGATCGTGTTTGTAGCATTGATAAATTTGTGTACTTTTGGCAATGCATGGTCTTACAATGTTGTTAACTTTGGAGCCAAAGGTGATGGGAGAACTGACTCAACACAAGCATTTCAAACCGTTTGGTCTAATGCTTGTGCCTCCACAAAACCAACCACAATTTATGTCCCACGAGGAAGATATTACCTTCGCTCTGGAACTTTCAACGGACCTTGCAAAAATAATGCTATCTTTATCCGCATTGATGGCACTTTGGTGGCTCCCTCCGACTTTCAAGTTATTGGAAACTCTGCAGCTTGGGTTGTTTTTAGGCACGTTGATGGAGTTACCATCTCAGGCGGCAATCTTGATGGGAAGGGGGCTGGCTTATGGACTTGCAAAAATTCTTCTATTAGCACTACTTGTCCATCTGGTGCCACCACCCTCCAATTCTCTAACTCCAAAAATGTAGTGGTCAGCGCATTAACATCACTCAATAGCCAAATGTTCCATATAGTCATCCATGGTTGTCAAAATGTCATGATGAAAGGCCTTAAGGTCTTGGCCTCTGGCAATAGTCCCAACACAGACGGAATCCATGTGCAAATGTCCACTGATGTGGCCATATTAAACTCCAAAATAGGCACTGGAGATGATTGCATTTCCATTGGTCCTGGTACTTCTAACTTACGTATTGAAAATATTATATGTGGACCTGGTCATGGAATAAGCATTGGGAGTTTAGCAAAGGATCTACAAGAGGATGGAGTCCAAAATGTTACCGTGAAGAATGTTGTATTTTCACGCACTCAAAATGGGGTAAGAATCAAAGCATGGGGCAAGCCTAGCAACGGTTTTGCTAGGAACATTCTTTTCCAACATATTGTAATGGACAATGTCCAAAATCCAATTGTTATCGATCAAAATTATTGTCCAAGCCACAAAGGATGTCCGGAAAAGGCTTCTGGTGTTAAAATTAACGATGTGACTTATCAAGACATCCATGGAACATCAGCCACTAAAGTAGCAGTAAAGTTTGATTGTAGTCCAATAAATCCATGTGTTCGAATAAAGTTAGAGAATGTAAAACTTACATATATGAATCAAACAGCGCAAGCTACATGCAACAATGTTGGAGGAATTGCAGCAGGTCTTGTTCAACCCACTAGTTGCTTCTAA

Homology

[Close]

BLAST of CSPI03G27600 vs. Swiss-Prot
Match: PGLR_PRUPE (Polygalacturonase OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 535.4 bits (1378), Expect = 5.3e-151
Identity = 259/391 (66.24%), Postives = 312/391 (79.80%), Query Frame = 1


Query: 7   KRSSSALLIVFVALINLCTFGNAWSYNVVNFGAKGDGRTDSTQAFQTVWSNACASTKPTT 66
           +RS  +L ++FV +IN     +  +YNV + GAK DG+TDST+AF + W+ ACAS  P  
Sbjct: 4   RRSLFSLSLIFVFMIN-SAIASPLTYNVASLGAKADGKTDSTKAFLSAWAKACASMNPGV 63

Query: 67  IYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFQVIGNSAAWVVFRHVDGVTISG 126
           IYVP G ++LR   F+GPCKNNAI  RI GTLVAPSD++VIGN+A W+ F HV+GVTISG
Sbjct: 64  IYVPAGTFFLRDVVFSGPCKNNAITFRIAGTLVAPSDYRVIGNAANWIFFHHVNGVTISG 123

Query: 127 GNLDGKGAGLWTCKNSSISTTCPSGATTLQFSNSKNVVVSALTSLNSQMFHIVIHGCQNV 186
           G LDG+G  LW CK +    +CPSGATTL FS+S N+VVS L SLNSQMFHIVI+  QNV
Sbjct: 124 GILDGQGTALWACK-ACHGESCPSGATTLGFSDSNNIVVSGLASLNSQMFHIVINDFQNV 183

Query: 187 MMKGLKVLASGNSPNTDGIHVQMSTDVAILNSKIGTGDDCISIGPGTSNLRIENIICGPG 246
            M+G++V  SGNSPNTDGIHVQMS+ V ILNSKI TGDDC+SIGPGTSNL IE + CGPG
Sbjct: 184 QMQGVRVSRSGNSPNTDGIHVQMSSGVTILNSKIATGDDCVSIGPGTSNLWIEGVACGPG 243

Query: 247 HGISIGSLAKDLQEDGVQNVTVKNVVFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNV 306
           HGISIGSL K+ +E GVQNVTVK V FS TQNG+RIK+WG+PS GFARNILFQH  M NV
Sbjct: 244 HGISIGSLGKEQEEAGVQNVTVKTVTFSGTQNGLRIKSWGRPSTGFARNILFQHATMVNV 303

Query: 307 QNPIVIDQNYCPSHKGCPEKASGVKINDVTYQDIHGTSATKVAVKFDCSPINPCVRIKLE 366
           +NPIVIDQ+YCP +KGCP + SGV+I+DVTY+DIHGTSAT+VAVKFDCSP +PC  IKLE
Sbjct: 304 ENPIVIDQHYCPDNKGCPGQVSGVQISDVTYEDIHGTSATEVAVKFDCSPKHPCREIKLE 363

Query: 367 NVKLTYMNQTAQATCNNVGGIAAGLVQPTSC 398
           +VKLTY NQ A+++C++  G   G+VQPTSC
Sbjct: 364 DVKLTYKNQAAESSCSHADGTTEGVVQPTSC 392

[Close]

BLAST of CSPI03G27600 vs. Swiss-Prot
Match: PGLR6_ARATH (Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana GN=At2g43860 PE=2 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 2.8e-112
Identity = 210/387 (54.26%), Postives = 267/387 (68.99%), Query Frame = 1


Query: 12  ALLIVFVALINLCTFGNAWSYNVVNFGAKGDGRTDSTQAFQTVWSNACASTKPTTIYVPR 71
           AL+I+   LI+        + NV+++GAK DG  DST+AF   W  ACAS  PTTI VP+
Sbjct: 13  ALIILDFTLISSLAHPIPSTLNVLSYGAKPDGSKDSTKAFLAAWDVACASANPTTIIVPK 72

Query: 72  GRYYLRSGTFNG-PCKNNAIFIRIDGTLVAPSDFQVIGNSAAWVVFRHVDGVTISGGNLD 131
           GR+ + +  F+G  CK   I IRI G++VAP DF++I +S  W+ F  V  V+I GG LD
Sbjct: 73  GRFLVGNLVFHGNECKQAPISIRIAGSIVAPEDFRIIASSKHWIWFEDVTDVSIYGGILD 132

Query: 132 GKGAGLWTCKNSSISTTCPSGATTLQFSNSKNVVVSALTSLNSQMFHIVIHGCQNVMMKG 191
            +G  LW CKN+     CP+GA +L FS S N+ +S LTS+NSQ FHIVI    NV + G
Sbjct: 133 AQGTSLWKCKNNG-GHNCPTGAKSLVFSGSNNIKISGLTSINSQKFHIVIDNSNNVNIDG 192

Query: 192 LKVLASGNSPNTDGIHVQMSTDVAILNSKIGTGDDCISIGPGTSNLRIENIICGPGHGIS 251
           +KV A  NSPNTDGIHV+ S  V I NS+IGTGDDCISIGPG++N+ I+ I CGPGHGIS
Sbjct: 193 VKVSADENSPNTDGIHVESSHSVHITNSRIGTGDDCISIGPGSTNVFIQTIRCGPGHGIS 252

Query: 252 IGSLAKDLQEDGVQNVTVKNVVFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNVQNPI 311
           IGSL +  +E GV NVTV NV F  T NGVRIK WGK SN FARNI+FQHI M  V+NPI
Sbjct: 253 IGSLGRAEEEQGVDNVTVSNVDFMGTNNGVRIKTWGKDSNSFARNIVFQHINMKMVKNPI 312

Query: 312 VIDQNYCPSHKGCPEKASGVKINDVTYQDIHGTSATKVAVKFDCSPINPCVRIKLENVKL 371
           +IDQ+YC  HK CP++ SGVK+++V Y+DIHGTS T+VAV  DCS   PC  I +++V L
Sbjct: 313 IIDQHYC-LHKPCPKQESGVKVSNVRYEDIHGTSNTEVAVLLDCSKEKPCTGIVMDDVNL 372

Query: 372 TYMNQTAQATCNNVGGIAAGLVQPTSC 398
             +++ AQA+C+N  G A  +V  T C
Sbjct: 373 VSVHRPAQASCDNANGSANDVVPFTPC 397

[Close]

BLAST of CSPI03G27600 vs. Swiss-Prot
Match: PGLR2_PLAAC (Exopolygalacturonase (Fragment) OS=Platanus acerifolia GN=plaa2 PE=1 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 2.0e-81
Identity = 158/366 (43.17%), Postives = 219/366 (59.84%), Query Frame = 1


Query: 32  YNVVNFGAKGDGRTDSTQAFQTVWSNACASTKPTTIYVPRGRYYLRSGTFNGPCKNNAIF 91
           +NV ++GAKG G  D +QA    W  ACAS  P+T+ +P+G Y +      GPCK + I 
Sbjct: 10  FNVNDYGAKGAG--DISQAVMKAWKAACASQGPSTVLIPKGNYNMGEVAMQGPCKGSKIG 69

Query: 92  IRIDGTLVAPSDFQVIGNSAAWVVFRHVDGVTISG-GNLDGKGAGLWTCKNSSISTTCPS 151
            +IDG + AP+D      S  WV F  +DG+T+SG G LDG+G   W   N   +  C  
Sbjct: 70  FQIDGVVKAPADPSKF-KSDGWVSFYRIDGLTVSGTGTLDGQGQTAWAKNNCDKNPNCKH 129

Query: 152 GATTLQFSNSKNVVVSALTSLNSQMFHIVIHGCQNVMMKGLKVLASGNSPNTDGIHVQMS 211
            A  L+F   K+ +V  +TSLNS+MFHI +  C+++  + + V A G S NTDGIHV +S
Sbjct: 130 AAMNLRFDFLKHAMVRDITSLNSKMFHINVLECEDITFQHVTVTAPGTSINTDGIHVGIS 189

Query: 212 TDVAILNSKIGTGDDCISIGPGTSNLRIENIICGPGHGISIGSLAKDLQEDGVQNVTVKN 271
             V I N+KI TGDDCISIGPG+ N+ I  + CGPGHGISIGSL +   E  V+ +TVK 
Sbjct: 190 KGVTITNTKIATGDDCISIGPGSQNVTITQVNCGPGHGISIGSLGRYNNEKEVRGITVKG 249

Query: 272 VVFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNVQNPIVIDQNYCPSHKGCPEKASGV 331
             FS T NGVR+K W     G A ++ FQ + M+NVQNP+++DQ YCP  +   +  S +
Sbjct: 250 CTFSGTMNGVRVKTWPNSPPGAATDLTFQDLTMNNVQNPVILDQEYCPYGQCSRQAPSRI 309

Query: 332 KINDVTYQDIHGTSATKVAVKFDCSPINPCVRIKLENVKLTYMNQ--TAQATCNNVGGIA 391
           K++++ + +I GTS  KVAV   CS   PC  +K+  + L+Y      A +TC+NV    
Sbjct: 310 KLSNINFNNIRGTSTGKVAVVIACSHGMPCSNMKIGEINLSYRGAGGPATSTCSNVKPTF 369

Query: 392 AGLVQP 395
           +G   P
Sbjct: 370 SGKQVP 372

[Close]

BLAST of CSPI03G27600 vs. Swiss-Prot
Match: PGLR_ACTDE (Polygalacturonase OS=Actinidia deliciosa PE=2 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 7.2e-76
Identity = 164/369 (44.44%), Postives = 218/369 (59.08%), Query Frame = 1


Query: 33  NVVNFGAKGDGRTDSTQAFQTVWSNACASTKPTTIYVPRGRYYLRSGTFNGPCKNNAIFI 92
           NV +FGAKGDGR D T+AF+  W  AC+ST    + VP+  Y +R  +F+GPCK+  + +
Sbjct: 91  NVDDFGAKGDGR-DDTKAFEKAWKAACSSTSSAVLLVPKKNYLVRPISFSGPCKSG-LTM 150

Query: 93  RIDGTLVAP---SDFQVIGNSAAWVVFRHVDGVTISGGN-LDGKGAGLW--TCKNSSIST 152
           +I GT+ A    SD++  G    W+VF  V  + + GG  ++G G   W  +CK +  + 
Sbjct: 151 QIYGTIEASDDRSDYRKDGRH--WLVFDSVQNLRVEGGGTINGNGKIWWQNSCKTNK-AL 210

Query: 153 TCPSGATTLQFSNSKNVVVSALTSLNSQMFHIVIHGCQNVMMKGLKVLASGNSPNTDGIH 212
            C    T L F  SK+V+V  L   N+Q  H+    C NV    L V A  NSPNTDGIH
Sbjct: 211 PCKDAPTALTFYKSKHVIVKNLKIENAQQIHVSFDNCVNVQASNLMVTAPENSPNTDGIH 270

Query: 213 VQMSTDVAILNSKIGTGDDCISIGPGTSNLRIENIICGPGHGISIGSLAKDLQEDGVQNV 272
           V  + ++ I +  IGTGDDCISI  G+  +R+ +I CGPGHGISIGSL     E  V +V
Sbjct: 271 VTGTQNIHISSCVIGTGDDCISIVNGSRKVRVNDITCGPGHGISIGSLGYGNSEAHVSDV 330

Query: 273 TVKNVVFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNVQNPIVIDQNYCPSHKGCPEK 332
            V       T NGVRIK W +  +G A NI FQ++ M NV+NPI+IDQNYC   K C E+
Sbjct: 331 VVNGAKLCGTTNGVRIKTW-QGGSGSASNIKFQNVEMHNVENPIIIDQNYCDQDKPCQEQ 390

Query: 333 ASGVKINDVTYQDIHGTSATKVAVKFDCSPINPCVRIKLENVKLTYM-NQTAQATCNNVG 392
           +S V++ +V YQ+I GT A+ VA+ FDCS   PC  I LE+V L       A+A CNNV 
Sbjct: 391 SSAVQVKNVVYQNIKGTCASNVAITFDCSKRFPCQGIVLEDVDLEIEGGAAAKALCNNVE 450

Query: 393 GIAAGLVQP 395
               G+V P
Sbjct: 451 LSETGVVSP 453

[Close]

BLAST of CSPI03G27600 vs. Swiss-Prot
Match: PGLR2_ARATH (Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana GN=At3g07850 PE=2 SV=2)

HSP 1 Score: 285.4 bits (729), Expect = 9.5e-76
Identity = 150/364 (41.21%), Postives = 214/364 (58.79%), Query Frame = 1


Query: 38  GAKGDGRTDSTQAFQTVWSNACASTKPTTIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGT 97
           GAKGD +TD + AF   W  ACA+   +TI VP+G Y + S  F GPCK   + + ++G 
Sbjct: 76  GAKGDSKTDDSAAFAAAWKEACAAG--STITVPKGEYMVESLEFKGPCKG-PVTLELNGN 135

Query: 98  LVAPSDFQVIGNSAAWVVFRHVDGVTISGGN--LDGKGAGLWTCKNSSISTTCPSGATTL 157
             AP+  +     A W+ F ++   T++G     DG+G+  W   + + +  C S    +
Sbjct: 136 FKAPATVKTTKPHAGWIDFENIADFTLNGNKAIFDGQGSLAWKANDCAKTGKCNSLPINI 195

Query: 158 QFSNSKNVVVSALTSLNSQMFHIVIHGCQNVMMKGLKVLASGNSPNTDGIHVQMSTDVAI 217
           +F+   N  ++++TS NS++FH+ I  C+N+ +  + + A   S NTDGIH+  S  V +
Sbjct: 196 RFTGLTNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNGVNL 255

Query: 218 LNSKIGTGDDCISIGPGTSNLRIENIICGPGHGISIGSLAKDLQEDGVQNVTVKNVVFSR 277
           + +KI TGDDC+SIG GT NL +EN+ CGPGHGISIGSL +   E  V+ VTV+  +   
Sbjct: 256 IGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKN 315

Query: 278 TQNGVRIKAWGKPSNGFARNILFQHIVMDNVQNPIVIDQNYCPSHKGCPEKASGVKINDV 337
           T NGVRIK W     G A NILF+ I MDNV  P++IDQ YCP         S VK++DV
Sbjct: 316 TDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSQVKLSDV 375

Query: 338 TYQDIHGTSATKVAVKFDCSPINPCVRIKLENVKLTYMNQ--TAQATCNNVGGIAAGLVQ 397
           T + I GTSATKVAVK  CS   PC  I L ++ L +  +   A + C+N+  I +G + 
Sbjct: 376 TIKGIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIKPILSGKLV 435

[Close]

BLAST of CSPI03G27600 vs. TrEMBL
Match: A0A0A0LY60_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G662770 PE=3 SV=1)

HSP 1 Score: 609.0 bits (1569), Expect = 4.2e-171
Identity = 290/396 (73.23%), Postives = 335/396 (84.60%), Query Frame = 1


Query: 2   IIQFEKRSSSALLIVFVALINLCTFGNAWSYNVVNFGAKGDGRTDSTQAFQTVWSNACAS 61
           II  +   S   LI+ V L +  TF +A SYNVV+FG KGDG TDSTQAFQT W+NACAS
Sbjct: 3   IIHLDNNHSLLSLILLVGLSSWSTFVDASSYNVVDFGGKGDGTTDSTQAFQTAWTNACAS 62

Query: 62  TKPTTIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFQVIGNSAAWVVFRHVDG 121
           TK  TIYVPRGRY L++ TF+GPCKN AI  RIDG++ APSD+ VIGNSAAWVVFRHVDG
Sbjct: 63  TKKATIYVPRGRYCLQNVTFSGPCKNKAIIFRIDGSMEAPSDYLVIGNSAAWVVFRHVDG 122

Query: 122 VTISGGNLDGKGAGLWTCKNSSISTTCPSGATTLQFSNSKNVVVSALTSLNSQMFHIVIH 181
           +TI GG+LDGKGA LW CKNSS +  CP+GATTL+FSNSKNVVV+ L SLNSQMFH+ I+
Sbjct: 123 MTILGGSLDGKGAALWACKNSSYNALCPTGATTLEFSNSKNVVVNNLKSLNSQMFHVAIN 182

Query: 182 GCQNVMMKGLKVLASGNSPNTDGIHVQMSTDVAILNSKIGTGDDCISIGPGTSNLRIENI 241
           GC+NVM+KGL+V AS NSPNTDGIHVQ S++V I+NSKIGTGDDCIS+GPG SNL+I+NI
Sbjct: 183 GCENVMVKGLRVSASSNSPNTDGIHVQSSSNVTIINSKIGTGDDCISVGPGVSNLQIQNI 242

Query: 242 ICGPGHGISIGSLAKDLQEDGVQNVTVKNVVFSRTQNGVRIKAWGKPSNGFARNILFQHI 301
            CGPGHGISIGSL KD++E GVQNVT+KNVVFSRT+NGVRIK WGKPSNGFA +I+FQHI
Sbjct: 243 SCGPGHGISIGSLGKDVKEIGVQNVTIKNVVFSRTENGVRIKTWGKPSNGFATDIVFQHI 302

Query: 302 VMDNVQNPIVIDQNYCPSHKGCPEKASGVKINDVTYQDIHGTSATKVAVKFDCSPINPCV 361
           VM+NV NPIVIDQNYCP+HKGCP +ASG+KI++VTYQDI GTS TKVA+ FDCSP NPC+
Sbjct: 303 VMNNVHNPIVIDQNYCPTHKGCPGQASGIKISNVTYQDIQGTSTTKVAIMFDCSPTNPCI 362

Query: 362 RIKLENVKLTYMNQTAQATCNNVGGIAAGLVQPTSC 398
            IKLENV LTY NQTA+A CNN  GI  G VQPT+C
Sbjct: 363 GIKLENVSLTYKNQTAEARCNNARGIVVGQVQPTAC 398

[Close]

BLAST of CSPI03G27600 vs. TrEMBL
Match: E5GBC3_CUCME (Polygalacturonase OS=Cucumis melo subsp. melo PE=3 SV=1)

HSP 1 Score: 607.4 bits (1565), Expect = 1.2e-170
Identity = 296/327 (90.52%), Postives = 312/327 (95.41%), Query Frame = 1


Query: 1   MIIQFEK-RSSSALLIVFVALINLCTFGNAWSYNVVNFGAKGDGRTDSTQAFQTVWSNAC 60
           MIIQFEK +SSS +LIV VAL+NL TFGNAWSYNVV+FG KGDGRTDSTQAFQTVWSNAC
Sbjct: 2   MIIQFEKIQSSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNAC 61

Query: 61  ASTKPTTIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFQVIGNSAAWVVFRHV 120
           +STKP TIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFQVIGNS AW+ FR+V
Sbjct: 62  SSTKPATIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFQVIGNSPAWIAFRNV 121

Query: 121 DGVTISGGNLDGKGAGLWTCKNSSISTTCPSGATTLQFSNSKNVVVSALTSLNSQMFHIV 180
           DGVT+SGGNLDGKGAGLW CKNSS STTCPSGATTLQFSNSKNVVVSALTSLNSQMFHIV
Sbjct: 122 DGVTVSGGNLDGKGAGLWACKNSSSSTTCPSGATTLQFSNSKNVVVSALTSLNSQMFHIV 181

Query: 181 IHGCQNVMMKGLKVLASGNSPNTDGIHVQMSTDVAILNSKIGTGDDCISIGPGTSNLRIE 240
           I+GCQNV M+G+KVLASGNSPNTDGIH QMS++VA+LNSKIGTGDDCISIGPGTSNLRIE
Sbjct: 182 INGCQNVTMRGIKVLASGNSPNTDGIHGQMSSNVAVLNSKIGTGDDCISIGPGTSNLRIE 241

Query: 241 NIICGPGHGISIGSLAKDLQEDGVQNVTVKNVVFSRTQNGVRIKAWGKPSNGFARNILFQ 300
           NI+CGPGHGISIGSLAKDLQE+GVQNVTVKNVVFSRTQNGVRIKAWGKPSNGFAR ILFQ
Sbjct: 242 NIVCGPGHGISIGSLAKDLQEEGVQNVTVKNVVFSRTQNGVRIKAWGKPSNGFARKILFQ 301

Query: 301 HIVMDNVQNPIVIDQNYCPSHKGCPEK 327
           HIVMDNVQNPIVIDQNYCP HKGCP K
Sbjct: 302 HIVMDNVQNPIVIDQNYCPRHKGCPGK 328

[Close]

BLAST of CSPI03G27600 vs. TrEMBL
Match: S5MMR8_9ROSA (Polygalacturonase 2 OS=Pyrus x bretschneideri GN=PG2 PE=2 SV=1)

HSP 1 Score: 553.9 bits (1426), Expect = 1.6e-154
Identity = 267/387 (68.99%), Postives = 320/387 (82.69%), Query Frame = 1


Query: 12  ALLIVFVALINLCTFGNAWSYNVVNFGAKGDGRTDSTQAFQTVWSNACASTKPTTIYVPR 71
           ALL++ +++ N+     A +++V + GAK DG TDST+AF + WSNACAS  P  IYVP 
Sbjct: 16  ALLMMAISITNVDAA--AVTFSVSSLGAKADGSTDSTKAFLSAWSNACASVNPAVIYVPA 75

Query: 72  GRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFQVIGNSAAWVVFRHVDGVTISGGNLDG 131
           GR+ L +  F+GPCKNNAI  RI GTLVAPSD+QVIGN+  W++F+HV+GVTISGG LDG
Sbjct: 76  GRFLLSNAVFSGPCKNNAITFRIAGTLVAPSDYQVIGNAGNWLLFQHVNGVTISGGVLDG 135

Query: 132 KGAGLWTCKNSSISTTCPSGATTLQFSNSKNVVVSALTSLNSQMFHIVIHGCQNVMMKGL 191
           +G GLW CK+S  S  CPSGATTL FSNS NVVVS L SLNSQMFHIV++GCQNV M+G+
Sbjct: 136 QGTGLWDCKSSGKS--CPSGATTLSFSNSNNVVVSGLVSLNSQMFHIVVNGCQNVKMQGV 195

Query: 192 KVLASGNSPNTDGIHVQMSTDVAILNSKIGTGDDCISIGPGTSNLRIENIICGPGHGISI 251
           KV A+GNSPNTDGIHVQMS+ V IL+SKI TGDDC+S+GPGT+NL IEN+ CGPGHGISI
Sbjct: 196 KVNAAGNSPNTDGIHVQMSSGVTILDSKISTGDDCVSVGPGTTNLWIENVACGPGHGISI 255

Query: 252 GSLAKDLQEDGVQNVTVKNVVFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNVQNPIV 311
           GSL KD QE GVQNVTVK + F+ T+NGVRIK+WG+PS GFAR+ILFQHIVM NVQNPI+
Sbjct: 256 GSLGKDQQEAGVQNVTVKTITFTGTENGVRIKSWGRPSTGFARSILFQHIVMTNVQNPII 315

Query: 312 IDQNYCPSHKGCPEKASGVKINDVTYQDIHGTSATKVAVKFDCSPINPCVRIKLENVKLT 371
           IDQNYCP+ KGCP +ASGVK++DVTYQDIHGTSAT+VAVKFDCS + PC  I+L++VKLT
Sbjct: 316 IDQNYCPNDKGCPGQASGVKVSDVTYQDIHGTSATEVAVKFDCSSMYPCNGIRLQDVKLT 375

Query: 372 YMNQTAQATCNNVGGIAAGLVQPTSCF 399
           Y NQ A+A+C + GG  AG VQPTSCF
Sbjct: 376 YNNQAAEASCIHAGGTTAGTVQPTSCF 398

[Close]

BLAST of CSPI03G27600 vs. TrEMBL
Match: G8FU52_PYRPY (Polygalacturonase OS=Pyrus pyrifolia GN=PG2 PE=2 SV=1)

HSP 1 Score: 553.5 bits (1425), Expect = 2.1e-154
Identity = 268/387 (69.25%), Postives = 320/387 (82.69%), Query Frame = 1


Query: 12  ALLIVFVALINLCTFGNAWSYNVVNFGAKGDGRTDSTQAFQTVWSNACASTKPTTIYVPR 71
           ALL++ +++ N+     A +++V + GAK DG TDST+AF + WSNACAS  P  IYVP 
Sbjct: 16  ALLMMAISITNVDAA--AVTFSVSSLGAKADGSTDSTKAFLSAWSNACASVNPAVIYVPA 75

Query: 72  GRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFQVIGNSAAWVVFRHVDGVTISGGNLDG 131
           GR+ L +  F+GPCKNNAI  RI GTLVAPSD+QVIGN+  W++F+HV+GVTISGG LDG
Sbjct: 76  GRFLLGNAVFSGPCKNNAITFRIAGTLVAPSDYQVIGNAGNWLLFQHVNGVTISGGVLDG 135

Query: 132 KGAGLWTCKNSSISTTCPSGATTLQFSNSKNVVVSALTSLNSQMFHIVIHGCQNVMMKGL 191
           +G GLW CK+S  S  CPSGATTL FSNS NVVVS L SLNSQMFHIV++GCQNV M+G+
Sbjct: 136 QGTGLWDCKSSGKS--CPSGATTLSFSNSNNVVVSGLISLNSQMFHIVVNGCQNVKMQGV 195

Query: 192 KVLASGNSPNTDGIHVQMSTDVAILNSKIGTGDDCISIGPGTSNLRIENIICGPGHGISI 251
           KV A+GNSPNTDGIHVQMS+ V IL+SKI TGDDC+S+GPGT+NL IEN+ CGPGHGISI
Sbjct: 196 KVNAAGNSPNTDGIHVQMSSGVTILDSKISTGDDCVSVGPGTTNLWIENVACGPGHGISI 255

Query: 252 GSLAKDLQEDGVQNVTVKNVVFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNVQNPIV 311
           GSL KD QE GVQNVTVK V F+ T+NGVRIK+WG+PS GFAR+ILFQHI+M NVQNPIV
Sbjct: 256 GSLGKDQQEAGVQNVTVKTVTFTGTENGVRIKSWGRPSTGFARSILFQHIIMTNVQNPIV 315

Query: 312 IDQNYCPSHKGCPEKASGVKINDVTYQDIHGTSATKVAVKFDCSPINPCVRIKLENVKLT 371
           IDQNYCP+ KGCP +ASGVK++DVTYQDIHGTSAT+VAVKFDCS + PC  I+L++VKLT
Sbjct: 316 IDQNYCPNDKGCPGQASGVKVSDVTYQDIHGTSATEVAVKFDCSSMYPCNGIRLQDVKLT 375

Query: 372 YMNQTAQATCNNVGGIAAGLVQPTSCF 399
           Y NQ A+A+C + GG  AG VQPTSCF
Sbjct: 376 YNNQAAEASCIHAGGTTAGTVQPTSCF 398

[Close]

BLAST of CSPI03G27600 vs. TrEMBL
Match: Q68UW1_PYRCO (Polygalacturonase OS=Pyrus communis GN=pg2 PE=2 SV=1)

HSP 1 Score: 552.4 bits (1422), Expect = 4.6e-154
Identity = 268/387 (69.25%), Postives = 320/387 (82.69%), Query Frame = 1


Query: 12  ALLIVFVALINLCTFGNAWSYNVVNFGAKGDGRTDSTQAFQTVWSNACASTKPTTIYVPR 71
           ALL++ +++ N+     A +++V + GAK DG TDST+AF + WSNACAS  P  IYVP 
Sbjct: 16  ALLMMAISITNVDAA--AVTFSVSSLGAKADGSTDSTKAFLSAWSNACASVNPAVIYVPA 75

Query: 72  GRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFQVIGNSAAWVVFRHVDGVTISGGNLDG 131
           GR+ L +  F+GPCKNNAI  RI GTLVAPSD++VIGN+  W++F+HV+GVTISGG LDG
Sbjct: 76  GRFLLGNAVFSGPCKNNAITFRIAGTLVAPSDYRVIGNAGNWLLFQHVNGVTISGGVLDG 135

Query: 132 KGAGLWTCKNSSISTTCPSGATTLQFSNSKNVVVSALTSLNSQMFHIVIHGCQNVMMKGL 191
           +G GLW CK+S  S  CPSGATTL FSNS NVVVS L SLNSQMFHIV++GCQNV M+G+
Sbjct: 136 QGTGLWDCKSSGKS--CPSGATTLSFSNSNNVVVSGLISLNSQMFHIVVNGCQNVKMQGV 195

Query: 192 KVLASGNSPNTDGIHVQMSTDVAILNSKIGTGDDCISIGPGTSNLRIENIICGPGHGISI 251
           KV A+GNSPNTDGIHVQMS+ V IL+SKI TGDDC+S+GPGT+NL IEN+ CGPGHGISI
Sbjct: 196 KVNAAGNSPNTDGIHVQMSSGVTILDSKISTGDDCVSVGPGTTNLWIENVACGPGHGISI 255

Query: 252 GSLAKDLQEDGVQNVTVKNVVFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNVQNPIV 311
           GSL KD QE GVQNVTVK V F+ T+NGVRIK+WG+PS GFAR+ILFQHIVM NVQNPIV
Sbjct: 256 GSLGKDQQEAGVQNVTVKTVTFTGTENGVRIKSWGRPSTGFARSILFQHIVMTNVQNPIV 315

Query: 312 IDQNYCPSHKGCPEKASGVKINDVTYQDIHGTSATKVAVKFDCSPINPCVRIKLENVKLT 371
           IDQNYCP+ KGCP +ASGVK++DVTYQDIHGTSAT+VAVKFDCS + PC  I+L++VKLT
Sbjct: 316 IDQNYCPNDKGCPGQASGVKVSDVTYQDIHGTSATEVAVKFDCSSMYPCNGIRLQDVKLT 375

Query: 372 YMNQTAQATCNNVGGIAAGLVQPTSCF 399
           Y NQ A+A+C + GG  AG VQPTSCF
Sbjct: 376 YNNQAAEASCIHAGGTTAGTVQPTSCF 398

[Close]

BLAST of CSPI03G27600 vs. TAIR10
Match: AT2G43870.1 (AT2G43870.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 500.0 bits (1286), Expect = 1.4e-141
Identity = 242/386 (62.69%), Postives = 300/386 (77.72%), Query Frame = 1


Query: 11  SALLIVFVAL-INLCTFGNAWSYNVVNFGAKGDGRTDSTQAFQTVWSNACASTKPTTIYV 70
           ++LL++FV   I+ C+   A SYNV++FGAK DG+TD+T+AF  VW  ACAS++P TI V
Sbjct: 2   ASLLVLFVFFFISSCS---AQSYNVLSFGAKPDGKTDATKAFMAVWQTACASSRPVTIVV 61

Query: 71  PRGRYYLRSGTFNGP-CKNNAIFIRIDGTLVAPSDFQVIGNSAAWVVFRHVDGVTISGGN 130
           P+GR+ LRS TF+G  CK   +  RIDGTLVAP+D++VIGN   W+ F+H+DG+T+ GG 
Sbjct: 62  PKGRFLLRSVTFDGSKCKPKPVTFRIDGTLVAPADYRVIGNEDYWIFFQHLDGITVYGGV 121

Query: 131 LDGKGAGLWTCKNSSISTTCPSGATTLQFSNSKNVVVSALTSLNSQMFHIVIHGCQNVMM 190
           LD +GA LW CK S     CPSGATT+ F +S NVVVS LTSLNSQMFH+VI+GC NV +
Sbjct: 122 LDARGASLWDCKKSG--KNCPSGATTIGFQSSSNVVVSGLTSLNSQMFHVVINGCNNVKL 181

Query: 191 KGLKVLASGNSPNTDGIHVQMSTDVAILNSKIGTGDDCISIGPGTSNLRIENIICGPGHG 250
           +G+KVLA+GNSPNTDGIHVQ S+ V+I N+KI TGDDC+SIGPGT+ L IEN+ CGPGHG
Sbjct: 182 QGVKVLAAGNSPNTDGIHVQSSSSVSIFNTKISTGDDCVSIGPGTNGLWIENVACGPGHG 241

Query: 251 ISIGSLAKDLQEDGVQNVTVKNVVFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNVQN 310
           ISIGSL KD  E GVQNVTVK V F+ T NGVRIK+W +PS+GFA+NI FQH VM+NV+N
Sbjct: 242 ISIGSLGKDSVESGVQNVTVKTVTFTGTDNGVRIKSWARPSSGFAKNIRFQHCVMNNVEN 301

Query: 311 PIVIDQNYCPSHKGCPEKASGVKINDVTYQDIHGTSATKVAVKFDCSPINPCVRIKLENV 370
           PI+IDQNYCP H  CP + SG+KI+DV + DIHGTSAT+V VK DCS   PC  I+LE+V
Sbjct: 302 PIIIDQNYCPDH-DCPRQVSGIKISDVLFVDIHGTSATEVGVKLDCSSKKPCTGIRLEDV 361

Query: 371 KLTYMNQTAQATCNNVGGIAAGLVQP 395
           KLTY N+ A + C + GGI AG  QP
Sbjct: 362 KLTYQNKPAASACTHAGGIEAGFFQP 381

[Close]

BLAST of CSPI03G27600 vs. TAIR10
Match: AT3G59850.1 (AT3G59850.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 491.9 bits (1265), Expect = 3.8e-139
Identity = 232/388 (59.79%), Postives = 301/388 (77.58%), Query Frame = 1


Query: 11  SALLIVFVALINLCTFGNAWSYNVVNFGAKGDGRTDSTQAFQTVWSNACASTKPTTIYVP 70
           S+LLIV + L+++ +  +A +YN++++GAK DG+TDST+AF  +W+ ACAS KP TI VP
Sbjct: 3   SSLLIVLLFLLSVSS-SSAQTYNILSYGAKPDGKTDSTKAFTVLWAKACASVKPVTILVP 62

Query: 71  RGRYYLRSGTFNGP-CKNNAIFIRIDGTLVAPSDFQVIGNSAAWVVFRHVDGVTISGGNL 130
           +GR+ LRS  F+G  CK  ++  RI GTLVAPSD++VIG    W++F+H+DG+++ GG L
Sbjct: 63  KGRFLLRSIIFDGSKCKRKSVTFRIQGTLVAPSDYRVIGKENYWILFQHLDGISVYGGVL 122

Query: 131 DGKGAGLWTCKNSSISTTCPSGATTLQFSNSKNVVVSALTSLNSQMFHIVIHGCQNVMMK 190
           D +GA LW+CK S     CPSGAT++ F +S+NVV+S LTSLNSQMFH+ I+GC NV + 
Sbjct: 123 DAQGASLWSCKKSG--KNCPSGATSIGFQSSRNVVISGLTSLNSQMFHVAINGCSNVKLD 182

Query: 191 GLKVLASGNSPNTDGIHVQMSTDVAILNSKIGTGDDCISIGPGTSNLRIENIICGPGHGI 250
           G+KV A GNSPNTDGIHVQ S+ V+ILNSKI TGDDC+SIGPGT+ L IEN+ CGPGHGI
Sbjct: 183 GVKVSADGNSPNTDGIHVQSSSTVSILNSKISTGDDCVSIGPGTNGLWIENVACGPGHGI 242

Query: 251 SIGSLAKDLQEDGVQNVTVKNVVFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNVQNP 310
           SIGSL K+  E GVQN+TVK   F+ T+NGVRIK+W +PSNGFA+NI FQH VM+NVQNP
Sbjct: 243 SIGSLGKESVEVGVQNITVKTATFTGTENGVRIKSWARPSNGFAKNIRFQHCVMNNVQNP 302

Query: 311 IVIDQNYCPSHKGCPEKASGVKINDVTYQDIHGTSATKVAVKFDCSPINPCVRIKLENVK 370
           IVIDQNYCP ++ CP + SG+KI+DV + DIHGTSAT+V VK DCS   PC  I++++VK
Sbjct: 303 IVIDQNYCPGNENCPNQVSGIKISDVMFFDIHGTSATEVGVKLDCSSKKPCTGIRIQDVK 362

Query: 371 LTYMNQTAQATCNNVGGIAAGLVQPTSC 398
           LTY N+ A   C++ GG  AG  +P SC
Sbjct: 363 LTYRNKPATTDCSHAGGSEAGFQRPNSC 387

[Close]

BLAST of CSPI03G27600 vs. TAIR10
Match: AT2G43890.1 (AT2G43890.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 418.3 bits (1074), Expect = 5.3e-117
Identity = 198/387 (51.16%), Postives = 274/387 (70.80%), Query Frame = 1


Query: 11  SALLIVFVALINLCTFGNAWSYNVVNFGAKGDGRTDSTQAFQTVWSNACASTKPTTIYVP 70
           + LL+ F + + + +   A +YNVV+FGAK DGRTDST+AF   W  AC S    T+ VP
Sbjct: 8   AVLLMFFSSFLLMKSSTAASNYNVVSFGAKPDGRTDSTKAFLGAWQAACRSAAAVTVTVP 67

Query: 71  RGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFQVIGNSAAWVVFRHVDGVTISGGNLD 130
           RG + L+   F GPC++   F +I GT+VAPSD++ +GNS  W++F  V+ ++I GG LD
Sbjct: 68  RGSFLLKPVEFRGPCRSRITF-QIYGTIVAPSDYRGLGNSGYWILFVKVNRISIIGGTLD 127

Query: 131 GKGAGLWTCKNSSISTTCPSGATTLQFSNSKNVVVSALTSLNSQMFHIVIHGCQNVMMKG 190
            +GA  W C+ S  S  CP GA ++ F+ + +VVVS LTS+NSQ  H+VI+ C NV+++ 
Sbjct: 128 ARGASFWACRKSGKS--CPVGARSMTFNWANDVVVSGLTSINSQTTHLVINSCNNVIVRK 187

Query: 191 LKVLASGNSPNTDGIHVQMSTDVAILNSKIGTGDDCISIGPGTSNLRIENIICGPGHGIS 250
           +K++A   SPNTDG+HVQ S  V + +    TGDDCISIGPGT NL +  + CGPGHGIS
Sbjct: 188 VKLVAPDQSPNTDGLHVQGSAGVTVTDGTFHTGDDCISIGPGTRNLYMSKLNCGPGHGIS 247

Query: 251 IGSLAKDLQEDGVQNVTVKNVVFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNVQNPI 310
           IGSL +D  E GV+N+T+ N VFS + NGVRIK W + S GF RN+LFQ+++M NVQNPI
Sbjct: 248 IGSLGRDANEAGVENITLINSVFSGSDNGVRIKTWARQSTGFVRNVLFQNLIMKNVQNPI 307

Query: 311 VIDQNYCPSHKGCPEKASGVKINDVTYQDIHGTSATKVAVKFDCSPINPCVRIKLENVKL 370
           ++DQNYCPS++GCP++ SGVKI+ V Y++I GTS T+ A+ FDCS  NPC  I+L ++KL
Sbjct: 308 IVDQNYCPSNQGCPKQGSGVKISQVVYRNIQGTSRTQQALTFDCSRSNPCQAIRLHDIKL 367

Query: 371 TYMNQTAQATCNNVGGIAAGLVQPTSC 398
           T+  ++A +TC N+ G+ AG+V P  C
Sbjct: 368 TFNGRSATSTCKNIKGVKAGVVMPQGC 391

[Close]

BLAST of CSPI03G27600 vs. TAIR10
Match: AT1G05660.1 (AT1G05660.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 415.6 bits (1067), Expect = 3.4e-116
Identity = 190/367 (51.77%), Postives = 264/367 (71.93%), Query Frame = 1


Query: 32  YNVVNFGAKGDGRTDSTQAFQTVWSNACASTKPTTIYVPRGRYYLRSGTFNGPCKNNAIF 91
           +NVV+FGAK DG TDST AF   W  AC S    T+ VP+G + L+  TF GPCK+   F
Sbjct: 28  FNVVSFGAKPDGVTDSTGAFLKAWQGACVSASSATVVVPKGTFLLKVITFGGPCKSKITF 87

Query: 92  IRIDGTLVAPSDFQVIGNSAAWVVFRHVDGVTISGGNLDGKGAGLWTCKNSSISTTCPSG 151
            ++ GT++AP D++  GNS  W++F  V+  ++ GG  D +  G W+C+ S     CP G
Sbjct: 88  -QVAGTVIAPEDYRTFGNSGFWILFNKVNRFSLVGGTFDARANGFWSCRKSG--QNCPPG 147

Query: 152 ATTLQFSNSKNVVVSALTSLNSQMFHIVIHGCQNVMMKGLKVLASGNSPNTDGIHVQMST 211
             ++ F+++K+V++S + S+NSQ+ H+ ++GC NV+++ +K++A GNSPNTDG HVQ ST
Sbjct: 148 VRSISFNSAKDVIISGVKSMNSQVTHMTLNGCTNVVVRNVKLVAPGNSPNTDGFHVQHST 207

Query: 212 DVAILNSKIGTGDDCISIGPGTSNLRIENIICGPGHGISIGSLAKDLQEDGVQNVTVKNV 271
            V    S + TGDDC++IGPGT NL I  + CGPGHG+SIGSLAK+L+EDGV+NVTV + 
Sbjct: 208 GVTFTGSTVQTGDDCVAIGPGTRNLLITKLACGPGHGVSIGSLAKELKEDGVENVTVSSS 267

Query: 272 VFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNVQNPIVIDQNYCPSHKGCPEKASGVK 331
           VF+ +QNGVRIK+W +PSNGF R + FQ +VM NV+NPI+IDQNYCP+H+GCP + SGVK
Sbjct: 268 VFTGSQNGVRIKSWARPSNGFVRTVFFQDLVMKNVENPIIIDQNYCPTHEGCPNEYSGVK 327

Query: 332 INDVTYQDIHGTSATKVAVKFDCSPINPCVRIKLENVKLTYMNQT-AQATCNNVGGIAAG 391
           I+ VTY++I GTSAT+ A+K  CS  +PC  I L+++KLTY   T A + C N  G + G
Sbjct: 328 ISQVTYKNIQGTSATQEAMKLVCSKSSPCTGITLQDIKLTYNKGTPATSFCFNAVGKSLG 387

Query: 392 LVQPTSC 398
           ++QPTSC
Sbjct: 388 VIQPTSC 391

[Close]

BLAST of CSPI03G27600 vs. TAIR10
Match: AT1G05650.1 (AT1G05650.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 409.5 bits (1051), Expect = 2.4e-114
Identity = 194/389 (49.87%), Postives = 268/389 (68.89%), Query Frame = 1


Query: 15  IVFVALINLCTFGNAWS-----YNVVNFGAKGDGRTDSTQAFQTVWSNACASTKPTTIYV 74
           I F  +  L TF +  S     +NVV+FGAK DG TDST AF   W  AC S    T+ V
Sbjct: 6   ITFPLIFTLLTFIDVSSSASIVFNVVSFGAKPDGVTDSTAAFLKAWQGACGSAASATVVV 65

Query: 75  PRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFQVIGNSAAWVVFRHVDGVTISGGNL 134
           P G + L+  TF GPCK+   F ++ GT+VAP D++  GNS +W++F  V+  ++ GG  
Sbjct: 66  PTGTFLLKVITFGGPCKSKITF-QVTGTVVAPEDYRTFGNSGSWILFNKVNRFSLVGGTF 125

Query: 135 DGKGAGLWTCKNSSISTTCPSGATTLQFSNSKNVVVSALTSLNSQMFHIVIHGCQNVMMK 194
           D +G+G W+C+ S     CP G  ++ F+++K+V++S + S+NSQ+ H+ ++GC NV ++
Sbjct: 126 DARGSGFWSCRKSG--QNCPPGVRSISFNSAKDVIISGVKSMNSQVSHMTLNGCTNVAVR 185

Query: 195 GLKVLASGNSPNTDGIHVQMSTDVAILNSKIGTGDDCISIGPGTSNLRIENIICGPGHGI 254
            ++++A G+SPNTDG  VQ ST V +  S + TGDDC++IG GT N  I  + CGPGHG+
Sbjct: 186 NIRLVAPGDSPNTDGFTVQFSTGVTLTGSTVQTGDDCVAIGQGTRNFLISKLACGPGHGV 245

Query: 255 SIGSLAKDLQEDGVQNVTVKNVVFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNVQNP 314
           SIGSLAK L EDGV+NVTV + VF+ +QNGVRIK+W +PS GF RN+ FQ+++M NVQNP
Sbjct: 246 SIGSLAKQLNEDGVENVTVSSSVFTGSQNGVRIKSWARPSTGFVRNVFFQNLIMRNVQNP 305

Query: 315 IVIDQNYCPSHKGCPEKASGVKINDVTYQDIHGTSATKVAVKFDCSPINPCVRIKLENVK 374
           I+IDQNYCPS++GCP + SGVKI  VTY++I GTSAT+ A+K  CS  NPC  I L+++K
Sbjct: 306 IIIDQNYCPSNQGCPTEHSGVKITQVTYKNIQGTSATQEAMKLVCSKSNPCTGITLQDIK 365

Query: 375 LTYMNQT-AQATCNNVGGIAAGLVQPTSC 398
           LTY   T A + C N  G   G++QPTSC
Sbjct: 366 LTYNKGTPATSLCFNAVGKNLGVIQPTSC 391

[Close]

BLAST of CSPI03G27600 vs. NCBI nr
Match: gi|449449695|ref|XP_004142600.1| (PREDICTED: polygalacturonase-like [Cucumis sativus])

HSP 1 Score: 609.0 bits (1569), Expect = 6.0e-171
Identity = 290/396 (73.23%), Postives = 335/396 (84.60%), Query Frame = 1


Query: 2   IIQFEKRSSSALLIVFVALINLCTFGNAWSYNVVNFGAKGDGRTDSTQAFQTVWSNACAS 61
           II  +   S   LI+ V L +  TF +A SYNVV+FG KGDG TDSTQAFQT W+NACAS
Sbjct: 3   IIHLDNNHSLLSLILLVGLSSWSTFVDASSYNVVDFGGKGDGTTDSTQAFQTAWTNACAS 62

Query: 62  TKPTTIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFQVIGNSAAWVVFRHVDG 121
           TK  TIYVPRGRY L++ TF+GPCKN AI  RIDG++ APSD+ VIGNSAAWVVFRHVDG
Sbjct: 63  TKKATIYVPRGRYCLQNVTFSGPCKNKAIIFRIDGSMEAPSDYLVIGNSAAWVVFRHVDG 122

Query: 122 VTISGGNLDGKGAGLWTCKNSSISTTCPSGATTLQFSNSKNVVVSALTSLNSQMFHIVIH 181
           +TI GG+LDGKGA LW CKNSS +  CP+GATTL+FSNSKNVVV+ L SLNSQMFH+ I+
Sbjct: 123 MTILGGSLDGKGAALWACKNSSYNALCPTGATTLEFSNSKNVVVNNLKSLNSQMFHVAIN 182

Query: 182 GCQNVMMKGLKVLASGNSPNTDGIHVQMSTDVAILNSKIGTGDDCISIGPGTSNLRIENI 241
           GC+NVM+KGL+V AS NSPNTDGIHVQ S++V I+NSKIGTGDDCIS+GPG SNL+I+NI
Sbjct: 183 GCENVMVKGLRVSASSNSPNTDGIHVQSSSNVTIINSKIGTGDDCISVGPGVSNLQIQNI 242

Query: 242 ICGPGHGISIGSLAKDLQEDGVQNVTVKNVVFSRTQNGVRIKAWGKPSNGFARNILFQHI 301
            CGPGHGISIGSL KD++E GVQNVT+KNVVFSRT+NGVRIK WGKPSNGFA +I+FQHI
Sbjct: 243 SCGPGHGISIGSLGKDVKEIGVQNVTIKNVVFSRTENGVRIKTWGKPSNGFATDIVFQHI 302

Query: 302 VMDNVQNPIVIDQNYCPSHKGCPEKASGVKINDVTYQDIHGTSATKVAVKFDCSPINPCV 361
           VM+NV NPIVIDQNYCP+HKGCP +ASG+KI++VTYQDI GTS TKVA+ FDCSP NPC+
Sbjct: 303 VMNNVHNPIVIDQNYCPTHKGCPGQASGIKISNVTYQDIQGTSTTKVAIMFDCSPTNPCI 362

Query: 362 RIKLENVKLTYMNQTAQATCNNVGGIAAGLVQPTSC 398
            IKLENV LTY NQTA+A CNN  GI  G VQPT+C
Sbjct: 363 GIKLENVSLTYKNQTAEARCNNARGIVVGQVQPTAC 398

[Close]

BLAST of CSPI03G27600 vs. NCBI nr
Match: gi|307135900|gb|ADN33764.1| (polygalacturonase [Cucumis melo subsp. melo])

HSP 1 Score: 607.4 bits (1565), Expect = 1.7e-170
Identity = 296/327 (90.52%), Postives = 312/327 (95.41%), Query Frame = 1


Query: 1   MIIQFEK-RSSSALLIVFVALINLCTFGNAWSYNVVNFGAKGDGRTDSTQAFQTVWSNAC 60
           MIIQFEK +SSS +LIV VAL+NL TFGNAWSYNVV+FG KGDGRTDSTQAFQTVWSNAC
Sbjct: 2   MIIQFEKIQSSSIILIVLVALMNLFTFGNAWSYNVVSFGGKGDGRTDSTQAFQTVWSNAC 61

Query: 61  ASTKPTTIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFQVIGNSAAWVVFRHV 120
           +STKP TIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFQVIGNS AW+ FR+V
Sbjct: 62  SSTKPATIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFQVIGNSPAWIAFRNV 121

Query: 121 DGVTISGGNLDGKGAGLWTCKNSSISTTCPSGATTLQFSNSKNVVVSALTSLNSQMFHIV 180
           DGVT+SGGNLDGKGAGLW CKNSS STTCPSGATTLQFSNSKNVVVSALTSLNSQMFHIV
Sbjct: 122 DGVTVSGGNLDGKGAGLWACKNSSSSTTCPSGATTLQFSNSKNVVVSALTSLNSQMFHIV 181

Query: 181 IHGCQNVMMKGLKVLASGNSPNTDGIHVQMSTDVAILNSKIGTGDDCISIGPGTSNLRIE 240
           I+GCQNV M+G+KVLASGNSPNTDGIH QMS++VA+LNSKIGTGDDCISIGPGTSNLRIE
Sbjct: 182 INGCQNVTMRGIKVLASGNSPNTDGIHGQMSSNVAVLNSKIGTGDDCISIGPGTSNLRIE 241

Query: 241 NIICGPGHGISIGSLAKDLQEDGVQNVTVKNVVFSRTQNGVRIKAWGKPSNGFARNILFQ 300
           NI+CGPGHGISIGSLAKDLQE+GVQNVTVKNVVFSRTQNGVRIKAWGKPSNGFAR ILFQ
Sbjct: 242 NIVCGPGHGISIGSLAKDLQEEGVQNVTVKNVVFSRTQNGVRIKAWGKPSNGFARKILFQ 301

Query: 301 HIVMDNVQNPIVIDQNYCPSHKGCPEK 327
           HIVMDNVQNPIVIDQNYCP HKGCP K
Sbjct: 302 HIVMDNVQNPIVIDQNYCPRHKGCPGK 328

[Close]

BLAST of CSPI03G27600 vs. NCBI nr
Match: gi|659086083|ref|XP_008443755.1| (PREDICTED: polygalacturonase-like [Cucumis melo])

HSP 1 Score: 605.9 bits (1561), Expect = 5.1e-170
Identity = 287/397 (72.29%), Postives = 326/397 (82.12%), Query Frame = 1


Query: 2   IIQFEKRSSSALLIVFVALINLCTFGNAWSYNVVNFGAKGDGRTDSTQAFQTVWSNACAS 61
           IIQ +   S  L I  V L N   F    SYNVVNFG KGDG TDSTQAFQ  W+NACAS
Sbjct: 3   IIQLDNNHSLLLFIFLVGLSNWSIFVETSSYNVVNFGGKGDGTTDSTQAFQMAWANACAS 62

Query: 62  TKPTTIYVPRGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFQVIGNSAAWVVFRHVDG 121
           T+  TIYVPRGRYY+++ TF+GPC N  I  RIDGTL APSDF VIGNS AW++FRHVDG
Sbjct: 63  TEKVTIYVPRGRYYIKNVTFSGPCNNKGIIFRIDGTLEAPSDFVVIGNSEAWILFRHVDG 122

Query: 122 VTISGGNLDGKGAGLWTCKNSSISTTCPSGATTLQFSNSKNVVVSALTSLNSQMFHIVIH 181
           +TI GGNLDG GA LW CKNSS +T CP+GATTL+FSNSKNVV++ L SLNSQMFHI I+
Sbjct: 123 ITILGGNLDGHGAALWACKNSSYNTLCPTGATTLEFSNSKNVVINNLKSLNSQMFHITIN 182

Query: 182 GCQNVMMKGLKVLASGNSPNTDGIHVQMSTDVAILNSKIGTGDDCISIGPGTSNLRIENI 241
           GC+NV++KGL+V AS NSPNTDGIHVQ S++V I+NSKIGTGDDCIS+GPG SNL+IENI
Sbjct: 183 GCKNVIIKGLRVSASSNSPNTDGIHVQSSSNVTIINSKIGTGDDCISVGPGISNLQIENI 242

Query: 242 ICGPGHGISIGSLAKDLQEDGVQNVTVKNVVFSRTQNGVRIKAWGKPSNGFARNILFQHI 301
            CGPGHGISIGSL KD+ E GVQNVTVKNVVFSRT+NGVRIK WGKPSNGFA NI+FQHI
Sbjct: 243 SCGPGHGISIGSLGKDVTEIGVQNVTVKNVVFSRTKNGVRIKTWGKPSNGFATNIIFQHI 302

Query: 302 VMDNVQNPIVIDQNYCPSHKGCPEKASGVKINDVTYQDIHGTSATKVAVKFDCSPINPCV 361
           VM+NV NPIVIDQNYCP+HK CP KASG+KI++VTYQDIHGTS T VA+ FDCSP NPC+
Sbjct: 303 VMNNVHNPIVIDQNYCPTHKACPGKASGIKISNVTYQDIHGTSTTTVAIMFDCSPTNPCI 362

Query: 362 RIKLENVKLTYMNQTAQATCNNVGGIAAGLVQPTSCF 399
            IKLEN+ LTY NQT +A C N  G+  G VQPT+CF
Sbjct: 363 GIKLENISLTYKNQTTEARCYNARGVVVGQVQPTACF 399

[Close]

BLAST of CSPI03G27600 vs. NCBI nr
Match: gi|470101431|ref|XP_004287176.1| (PREDICTED: polygalacturonase [Fragaria vesca subsp. vesca])

HSP 1 Score: 557.4 bits (1435), Expect = 2.1e-155
Identity = 267/387 (68.99%), Postives = 313/387 (80.88%), Query Frame = 1


Query: 11  SALLIVFVALINLCTFGNAWSYNVVNFGAKGDGRTDSTQAFQTVWSNACASTKPTTIYVP 70
           S +L+ F+ +        A +Y+V   GAK DG+TDST+AF + W+ ACAS KP  IYVP
Sbjct: 6   SLILLSFLFIFIYSAIAKAVTYSVTTLGAKPDGKTDSTKAFLSAWAKACASVKPPVIYVP 65

Query: 71  RGRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFQVIGNSAAWVVFRHVDGVTISGGNLD 130
            GR+ LR+  F+GPCKN+ I  RI GTLVAPSD++VIGN+  W++F+HV+GVTISGG LD
Sbjct: 66  AGRFLLRNAVFSGPCKNSRITFRIAGTLVAPSDYRVIGNAGNWLLFQHVNGVTISGGILD 125

Query: 131 GKGAGLWTCKNSSISTTCPSGATTLQFSNSKNVVVSALTSLNSQMFHIVIHGCQNVMMKG 190
           G+G GLW CKNS  S  CPSGATTL FSNS N+VV  L SLNSQMFHIV++GC NV M+G
Sbjct: 126 GQGTGLWACKNSGKS--CPSGATTLSFSNSNNIVVKGLVSLNSQMFHIVVNGCHNVKMQG 185

Query: 191 LKVLASGNSPNTDGIHVQMSTDVAILNSKIGTGDDCISIGPGTSNLRIENIICGPGHGIS 250
           +KV ASGNSPNTDGIHVQMS+ V ILNSKI TGDDC+SIGPGTSNL IEN+ CGPGHGIS
Sbjct: 186 VKVSASGNSPNTDGIHVQMSSGVTILNSKISTGDDCVSIGPGTSNLWIENVACGPGHGIS 245

Query: 251 IGSLAKDLQEDGVQNVTVKNVVFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNVQNPI 310
           IGSL KDL+E GVQNVTVK V F+ TQNGVRIK+WG+ S GFARNILFQH VM+NVQNP+
Sbjct: 246 IGSLGKDLKEAGVQNVTVKTVTFTNTQNGVRIKSWGRASTGFARNILFQHCVMNNVQNPV 305

Query: 311 VIDQNYCPSHKGCPEKASGVKINDVTYQDIHGTSATKVAVKFDCSPINPCVRIKLENVKL 370
           V+DQ YCP +KGCP + SGVKI+DVTYQDIHGTSAT+VAVKFDCS   PC RI+LENVKL
Sbjct: 306 VVDQKYCPDNKGCPGEVSGVKISDVTYQDIHGTSATEVAVKFDCSSKYPCSRIRLENVKL 365

Query: 371 TYMNQTAQATCNNVGGIAAGLVQPTSC 398
           TY N+ A A+C+N GG +AG VQPTSC
Sbjct: 366 TYKNEAALASCSNAGGTSAGTVQPTSC 390

[Close]

BLAST of CSPI03G27600 vs. NCBI nr
Match: gi|658003494|ref|XP_008394262.1| (PREDICTED: polygalacturonase-like [Malus domestica])

HSP 1 Score: 557.0 bits (1434), Expect = 2.7e-155
Identity = 270/386 (69.95%), Postives = 320/386 (82.90%), Query Frame = 1


Query: 12  ALLIVFVALINLCTFGNAWSYNVVNFGAKGDGRTDSTQAFQTVWSNACASTKPTTIYVPR 71
           AL++V V++ ++     A +++V + GAK DGRTDSTQAF + W+ ACAS  P  IYVP 
Sbjct: 16  ALMMVAVSITSVDAA--AVTFSVSSLGAKADGRTDSTQAFLSAWAKACASVNPAVIYVPA 75

Query: 72  GRYYLRSGTFNGPCKNNAIFIRIDGTLVAPSDFQVIGNSAAWVVFRHVDGVTISGGNLDG 131
           GR+ LR+  F+GPCKNNAI  RI GTLVAPSD++VIGN+  W+ F+HV+GVTISGG LDG
Sbjct: 76  GRFLLRNAVFSGPCKNNAITFRIAGTLVAPSDYRVIGNADXWLFFQHVNGVTISGGVLDG 135

Query: 132 KGAGLWTCKNSSISTTCPSGATTLQFSNSKNVVVSALTSLNSQMFHIVIHGCQNVMMKGL 191
           KG GLW CK+S  S  CPSGATTL FSNS N+VVS L SLNSQMFHIVI+GC NV M+G+
Sbjct: 136 KGTGLWGCKSSGQS--CPSGATTLGFSNSNNIVVSGLVSLNSQMFHIVINGCHNVKMQGV 195

Query: 192 KVLASGNSPNTDGIHVQMSTDVAILNSKIGTGDDCISIGPGTSNLRIENIICGPGHGISI 251
           KV+A+GNSPNTDGIHVQMS+ V ILNSKI TGDDC+SIGPGT+NL IEN+ CGPGHGISI
Sbjct: 196 KVIAAGNSPNTDGIHVQMSSGVTILNSKISTGDDCVSIGPGTTNLWIENVACGPGHGISI 255

Query: 252 GSLAKDLQEDGVQNVTVKNVVFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNVQNPIV 311
           GSL KD QE GVQNVTVK V F+ TQNGVRIK+WG+PS GFARNILFQH+VM NVQNPIV
Sbjct: 256 GSLGKDQQEAGVQNVTVKTVTFTGTQNGVRIKSWGRPSTGFARNILFQHVVMTNVQNPIV 315

Query: 312 IDQNYCPSHKGCPEKASGVKINDVTYQDIHGTSATKVAVKFDCSPINPCVRIKLENVKLT 371
           IDQ+YCP++KGCP + SGVK++DVTYQDIHGTSAT+VAVKFDCS   PC RI+L++VKLT
Sbjct: 316 IDQHYCPNNKGCPXQVSGVKVSDVTYQDIHGTSATEVAVKFDCSSKYPCNRIRLQDVKLT 375

Query: 372 YMNQTAQATCNNVGGIAAGLVQPTSC 398
           Y NQ A+A+C++ GG  AG VQPTSC
Sbjct: 376 YKNQAAEASCSHAGGTTAGTVQPTSC 397

The following BLAST results are available for this feature:

BLAST of CSPI03G27600 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PGLR_PRUPE	5.3e-151	66.24	Polygalacturonase OS=Prunus persica PE=2 SV=1	[more]
PGLR6_ARATH	2.8e-112	54.26	Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana GN=At2g43860 PE=2 S...	[more]
PGLR2_PLAAC	2.0e-81	43.17	Exopolygalacturonase (Fragment) OS=Platanus acerifolia GN=plaa2 PE=1 SV=1	[more]
PGLR_ACTDE	7.2e-76	44.44	Polygalacturonase OS=Actinidia deliciosa PE=2 SV=1	[more]
PGLR2_ARATH	9.5e-76	41.21	Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana GN=At3g07850 PE=2 SV=...	[more]

BLAST of CSPI03G27600 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LY60_CUCSA	4.2e-171	73.23	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G662770 PE=3 SV=1	[more]
E5GBC3_CUCME	1.2e-170	90.52	Polygalacturonase OS=Cucumis melo subsp. melo PE=3 SV=1	[more]
S5MMR8_9ROSA	1.6e-154	68.99	Polygalacturonase 2 OS=Pyrus x bretschneideri GN=PG2 PE=2 SV=1	[more]
G8FU52_PYRPY	2.1e-154	69.25	Polygalacturonase OS=Pyrus pyrifolia GN=PG2 PE=2 SV=1	[more]
Q68UW1_PYRCO	4.6e-154	69.25	Polygalacturonase OS=Pyrus communis GN=pg2 PE=2 SV=1	[more]

BLAST of CSPI03G27600 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G43870.1	1.4e-141	62.69	Pectin lyase-like superfamily protein	[more]
AT3G59850.1	3.8e-139	59.79	Pectin lyase-like superfamily protein	[more]
AT2G43890.1	5.3e-117	51.16	Pectin lyase-like superfamily protein	[more]
AT1G05660.1	3.4e-116	51.77	Pectin lyase-like superfamily protein	[more]
AT1G05650.1	2.4e-114	49.87	Pectin lyase-like superfamily protein	[more]

BLAST of CSPI03G27600 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449449695\|ref\|XP_004142600.1\|	6.0e-171	73.23	PREDICTED: polygalacturonase-like [Cucumis sativus]	[more]
gi\|307135900\|gb\|ADN33764.1\|	1.7e-170	90.52	polygalacturonase [Cucumis melo subsp. melo]	[more]
gi\|659086083\|ref\|XP_008443755.1\|	5.1e-170	72.29	PREDICTED: polygalacturonase-like [Cucumis melo]	[more]
gi\|470101431\|ref\|XP_004287176.1\|	2.1e-155	68.99	PREDICTED: polygalacturonase [Fragaria vesca subsp. vesca]	[more]
gi\|658003494\|ref\|XP_008394262.1\|	2.7e-155	69.95	PREDICTED: polygalacturonase-like [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000743	Glyco_hydro_28
IPR006626	PbH1
IPR011050	Pectin_lyase_fold/virulence
IPR012334	Pectin_lyas_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0004650	polygalacturonase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0005975	carbohydrate metabolic process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071555	cell wall organization
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0047911	galacturan 1,4-alpha-galacturonidase activity
molecular_function	GO:0004650	polygalacturonase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G27600.1	CSPI03G27600.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 59..385 score: 7.0
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 240..253 scor
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 183..209 score: 2800.0coord: 119..140 score: 5100.0coord: 233..253 score: 1100.0coord: 293..314 score: 3900.0coord: 210..231 score: 2700.0coord: 263..284 score:
IPR011050	Pectin lyase fold/virulence factor	unknown	SSF51126	Pectin lyase-like	coord: 15..398 score: 1.57E
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 17..397 score: 2.3E
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 9..398 score: 1.4E
None	No IPR available	PANTHER	PTHR31375:SF2	POLYGALACTURONASE/PECTINASE	coord: 9..398 score: 1.4E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI03G27600	Csa3G629740	Cucumber (Chinese Long) v2	cpicuB120
CSPI03G27600	MELO3C022714	Melon (DHL92) v3.5.1	cpimeB200
CSPI03G27600	CsaV3_3G030000	Cucumber (Chinese Long) v3	cpicucB144
CSPI03G27600	Cucsa.150180	Cucumber (Gy14) v1	cgycpiB221
CSPI03G27600	CsGy3G025650	Cucumber (Gy14) v2	cgybcpiB110

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI03G27600	Wild cucumber (PI 183967)	cpicpiB104
CSPI03G27600	Cucumber (Gy14) v1	cgycpiB078
CSPI03G27600	Cucumber (Gy14) v1	cgycpiB381
CSPI03G27600	Cucurbita maxima (Rimu)	cmacpiB516
CSPI03G27600	Cucurbita maxima (Rimu)	cmacpiB606
CSPI03G27600	Cucurbita moschata (Rifu)	cmocpiB239
CSPI03G27600	Cucurbita moschata (Rifu)	cmocpiB506
CSPI03G27600	Cucurbita moschata (Rifu)	cmocpiB595
CSPI03G27600	Cucurbita moschata (Rifu)	cmocpiB829
CSPI03G27600	Cucumber (Chinese Long) v2	cpicuB166
CSPI03G27600	Melon (DHL92) v3.5.1	cpimeB248
CSPI03G27600	Watermelon (Charleston Gray)	cpiwcgB189
CSPI03G27600	Watermelon (Charleston Gray)	cpiwcgB247
CSPI03G27600	Watermelon (Charleston Gray)	cpiwcgB258
CSPI03G27600	Watermelon (97103) v1	cpiwmB225
CSPI03G27600	Watermelon (97103) v1	cpiwmB252
CSPI03G27600	Cucurbita pepo (Zucchini)	cpecpiB242
CSPI03G27600	Cucurbita pepo (Zucchini)	cpecpiB610
CSPI03G27600	Cucurbita pepo (Zucchini)	cpecpiB718
CSPI03G27600	Cucurbita pepo (Zucchini)	cpecpiB858
CSPI03G27600	Bottle gourd (USVL1VR-Ls)	cpilsiB175
CSPI03G27600	Bottle gourd (USVL1VR-Ls)	cpilsiB199
CSPI03G27600	Bottle gourd (USVL1VR-Ls)	cpilsiB201
CSPI03G27600	Melon (DHL92) v3.6.1	cpimedB194
CSPI03G27600	Melon (DHL92) v3.6.1	cpimedB242
CSPI03G27600	Cucumber (Gy14) v2	cgybcpiB121
CSPI03G27600	Cucumber (Gy14) v2	cgybcpiB316
CSPI03G27600	Silver-seed gourd	carcpiB0325
CSPI03G27600	Silver-seed gourd	carcpiB0816
CSPI03G27600	Silver-seed gourd	carcpiB0997
CSPI03G27600	Watermelon (97103) v2	cpiwmbB229
CSPI03G27600	Watermelon (97103) v2	cpiwmbB244
CSPI03G27600	Wax gourd	cpiwgoB309