CSPI03G26070 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G26070
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr3 : 23370074 .. 23370265 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATAACTTAGGGTGGAGCAGTAGAGGTAGACGACACTCGACAGAAGTGGACGAAACACAAATGCAACGATTGATTCGACTCCTCATCTTCGACTCTCCTCAGTCCTCACTCCGTTCAACGTCCACAGCGACTCCTCGTCTCCTTAGTCCTCATTTCGCTCGGCGCTCAGTACTATTGCGTTTGAAGTTT

mRNA sequence

ATGTATAACTTAGGGTGGAGCAGTAGAGGTAGACGACACTCGACAGAAGTGGACGAAACACAAATGCAACGATTGATTCGACTCCTCATCTTCGACTCTCCTCAGTCCTCACTCCGTTCAACGTCCACAGCGACTCCTCGTCTCCTTAGTCCTCATTTCGCTCGGCGCTCAGTACTATTGCGTTTGAAGTTT

Coding sequence (CDS)

ATGTATAACTTAGGGTGGAGCAGTAGAGGTAGACGACACTCGACAGAAGTGGACGAAACACAAATGCAACGATTGATTCGACTCCTCATCTTCGACTCTCCTCAGTCCTCACTCCGTTCAACGTCCACAGCGACTCCTCGTCTCCTTAGTCCTCATTTCGCTCGGCGCTCAGTACTATTGCGTTTGAAGTTT
Homology
[Close]
BLAST of CSPI03G26070 vs. TrEMBL
Match: A0A0A0L8R5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G597270 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 5.0e-10
Identity = 39/48 (81.25%), Postives = 40/48 (83.33%), Query Frame = 1 

Query: 17 VDETQMQRLIRLLIFDSPQSSLRSTSTATPRLLSPHFARRSVLLRLKF 65
          VDETQMQRLIRLLIFDSPQSSLRSTSTATPRLLSPH    S L  + F
Sbjct: 7  VDETQMQRLIRLLIFDSPQSSLRSTSTATPRLLSPHIFTDSSLKFVDF 54

[Close]
BLAST of CSPI03G26070 vs. NCBI nr
Match: gi|700203095|gb|KGN58228.1| (hypothetical protein Csa_3G597270 [Cucumis sativus])

HSP 1 Score: 71.2 bits (173), Expect = 7.2e-10
Identity = 39/48 (81.25%), Postives = 40/48 (83.33%), Query Frame = 1 

Query: 17 VDETQMQRLIRLLIFDSPQSSLRSTSTATPRLLSPHFARRSVLLRLKF 65
          VDETQMQRLIRLLIFDSPQSSLRSTSTATPRLLSPH    S L  + F
Sbjct: 7  VDETQMQRLIRLLIFDSPQSSLRSTSTATPRLLSPHIFTDSSLKFVDF 54

The following BLAST results are available for this feature:
BLAST of CSPI03G26070 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI03G26070 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L8R5_CUCSA5.0e-1081.25Uncharacterized protein OS=Cucumis sativus GN=Csa_3G597270 PE=4 SV=1[more]
BLAST of CSPI03G26070 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI03G26070 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700203095|gb|KGN58228.1|7.2e-1081.25hypothetical protein Csa_3G597270 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G26070.1CSPI03G26070.1mRNA