CSPI03G25110 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI03G25110
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	Chr3 : 22352269 .. 22356445 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCCTTCTCCTCCATGCTTTCTTTCATCCTGCACTAATAGAGGCCTAAACCAAAATTATACCTTTAGGCCCAACAAATTGGTATCAGAGCAAGGTTCTTGAAATTCAAGAAACTGAATCTTGGAGAAAAGAATTTTGCTCATTATCAACAAAGTGAGAAATCCAATGAAGAAAATCAACAGCCTTACAATCTCATAGGGAGACTTTGCATTATGGAAAGCAAAGATCAAAGCCTTGCTTGGACAGCAAAAGTCTCATAAAGCCCTTTTAGATCCTTCAGAACTTCCAACAACCCTCACAGCAACACAAAAAGAAGAAATGAAATTAAATGCCTATGGAACACTAATACTAAACCTTAGTGACAACATAATTAGGCAAGTTCTAGAAGAAGAAACAGCATATAAAGTTTGGATGAAACTAGAAAGCCTATATGCCTCTAAAGATCTCCCAAACAAAATGTACCTAAGGGAAAAAAATTTCACATATAGAATGGATCCTTCTAAAACCTTATCTGAAAACTTAGATGAATTCAAGAAAATAGTTTCAGATTTTAAAACCCTTGAGGACAAACTAAGTGATGAAAATGAGGCATTGTCCTTTTAAATTCTTTACCCGAGGCATACAAAGAAGTAAAAAATGCTCTAAAATATGGAAGAGACTCAATAAAAACAGATGTCATAATATCAGCTCTAAGAACTAGAGAATTAGAAATACATTCATCACACAAAGAAAATCATAGTGGTGATGGATTGTTTGTCAGAGGTAAATCCCAAAACAATCAAAGTAAAAACAGTAACAAATCCTTTTCTAATGAAGACAAGAAAGGAAAACAGAAAAAGAAATGTAAATACTGTAAAAAGAAGGGACACCTCATACAAGAATGTTTTTTCCTTAAAAGAAAGAATCAAGAAAAAGAAAAAGATTCTAAAGGGAAACAACCAGAAGTCTCTATAGTAGAAAGCTCTTTTACCTACACAGATGCCTTGGCATCAACCTTAGACCAAGCCAACCATGTCAACCCCTTAGGAAAACATGATTGGGTCCTAGACTCAGGATGCACCTACCATATGACACCTTTTAGAGCATGGTTCAATACCTATAGAGAGATCAGTGGAGAATCTGTGTTCATAGGGAATAATAATGAATGTAACATTGCTGGAATTGGATCAGTTACCATGAAACTAAAAGATAAGACTGTAAAACTCCTTAGAAATGTAAGACATGTTCCTCACCTTAAAAGAAATTTAATCTCCCTAAGAATGTTAGACTCTCTAGGGTGTGAATATAAAGGAAAATGTGGAGTTTTCCAAGTGTTTATGGGATCTAAGTTAGTCTTGGTTGGGGAAAAGGTAAATGATTTGTTCATAATAAAAGGAGTAGAAATGATAGAGGAGGCAAATACAGTTTTATCTCTAAACCTAATAGAAGTTGATATTTGGCATAAAAGATTGTCCCACATTAGTCAGAAGGGTCTTGAGGCACTATCTAAACAGGGCATTCTGCCTCAAGACATATGCAGCAAGTTGTCCTTTTGTGAACACTGTGTACTAGGCAAAACAAGAAAACAAAACTTCACCAAAGCACAACACACAACAAGAGGAATCCTAGACTACATCCATTTGGATCTATGGGGTCCTGCATCCACTCCAAGCCTAAGTGGCTCAAGGTATTTTCTATCTTTTACTGATGATTTTTCTAGAAAAAGTTGGATTTGTTTCTTATAAACTAAAGATCAAGTTTTTGAAAAACTTAAAGAATGGAAACTAATGATATAAAAACAAACTGATAAAAATGTTAGATATCTTAGAACTGACAATGGTTTGGAGTTTTGTGGAGAGTTGTTTAATAACTTTTGCAGGCAAAGTGGAATAACAAGACACAAAACAGTGACCTACACACCCCAACAAAACAGAGTGGCAGAAAGACTAAACAAAACTATAATGGAAAGGGTAAGGTGTCTATTATCAGATGTCATCCTAAAAGAAAAGTTTTGGGCTGAAGCTGCTGCCTATGTTATGCACACGTTGAACAGAAGCCCTCATACCTCCTTAGGTCTCCTAACACCTGAGAAAAAGTGATCCAAACACCCACCAAGTCTAAGTGACCTTAAAGTGTTCGGATGTGTAGGGTATGCTCACCAAAATAAAGGGAAACTAAAGGTCAGGGCTGCTAAGTGTATGTTTATTGGTTTCACAGAAGGGGTAAAGGGTTTCAAGTTGTGGCATCCTACTAACAAGAGGTTTATAATCAGTAGGGATGTTCTTTTTAGAGAATAAAAAATGTTTATGCAAGGTAAAAGCAGCACTGAAGGGAACTTTGATGACACACAATCCTATACTACTCAGATTGAGGTGGAGAATACAGGAAAAAGTGTTCAACCTACTGAGGAACCTACAGCTATTGAACAAGAACAAGTGGAGAACTTAAGTGAAGAACAAGATGAAATGCTTGAAGAACAACCTGACTTGAGCCAATATTCCCTAGCAAGAGACAGACAAAGAAGGATAATTGTCCCTCCAGCCAGGTATGCTGAATCTAATTACATAAGTTTTGTTTTGAATGCTACTGTAGTTCCTAATGATTCAGAACCAAGTTCCTTTGATGAAGCTGTGAACAGTAGCAATGCAAGACAGTGGATTGAAGCTATGAATGAAGAAATAAATTCACTAAATGTGAATGATACTTGGACACTAGCTTCTCTACCTAAAGGATGCAAACCAATAGCATCTAAGTGGATTTTCAAACTCAAAGAAGGAATTACTAAAAACTCGCAACCAAGGTACAAGGCAAGGCTGGTAGCAAAGGGTTTCACTCAAAGAGAAGGTATTGACTATTCTGAAATCTTCTCCCCTGTAGTTAAACAAACCTCTATTAGACTTCTCCTATCCCTAGTTGCTCAAAACAACCTAGAACTGGATCAACTTGATGTAAAAACAACTTTTCTCCATGACTATCTAGAAGAGACAATCTATATGGTTCAACCTAAGGGTTATGAGGTTCAAGGTAAGGAAGACCTCTATTATTTACTAAAGAAGTCTATATATGGGTTAAAACAATCTCCTAGATGTTGGTATAGAAGATTTGATGATTTCATTACTAGTTTAGGTTTTCAAAAAAGTTCCTATGATATGTGTGTTTATATATAAACACAACAACCTACAAAGACAAGGTCTACTTGCTACTCAATGTGGATGATATGCTCCTTGCAGGAAGCTCTAAAGAAGACCTGGTACATGTAAAAAATCTTTTAAGTAAATAATTTGACATGAAAGACTTAAGGGAATCTAAGAAGATCCTAGGTATAGACATCATTAGAGATAGGGACCAATCTACACTGAGCATAAACCAAACATCCTACTGTGAAAAAGTGATAAGAAGATTCAACCTCACTAATGCTAGACCAGTTACTCTCCCTATTGCTCATCATTTTAAGCTATCAGCTGTCAATTCCCCTAGTGAAACTGATATAGAACACAAGCTACAAATGAAAAATGTTCCTTACAGTCAAGCAGTGGGAAGTTTAATGTACCTAATGATCTCTACAAGACCTGATCTATCCTATTCAGCAAGCCTAGTCAGCAAATATATGGCTAATTCTGGAAGAAGACACTGGGAAGCTACTAAATGGATAATCAGATACTTAATTTGGTCAAAGAATGCTAGATTGAACTACCAAAGGACCACTGAAATAGAACTAGAACTAATAGGATATGTAGACTCAGACTTTGCTGGTGACAGTGATAAAAGGAGAAGCCTAACCGGTTACGTTTTTCTCTACGGTCGTAATCTAATAAGTTGGAAAGCAATCCTACAATCCATTGTTGCTCTCTCAACTACCGAAGCAGAATATATTGCACTATCAGAAGGTGTAAAAGAGAGATTATGGCTTAAAGGATTGATGAGGGACTTTGGAATCAAATAGTCGATTGTTAAAATCTTTTATGACAACCAAAGTGCCATTCGCCTATCCAAAAATCCTCAATACCACAGCCGAACAAAGCACATAGACATAAAATATCACTTCATACGAGAGAAAATTGAAGCTGGAGAAATTCAAGTATTGAAAGTTCATACCTCTGAGAACGCCGCTGATATGCTCACTAAGTCGGTCTCAACATTGAAGCTTCAGAAGTGCTTCGAACTGATAGGTTTCGACCTACCTGAAAAAGGATAG

mRNA sequence

ATGTCTCCTTCTCCTCCATGCTTTCTTTCATCCTGCACTAATAGAGGCCTAAACCAAAATTATACCTTTAGGCCCAACAAATTGGGAGACTTTGCATTATGGAAAGCAAAGATCAAAGCCTTGCTTGGACAGCAAAAGTCTCATAAAGCCCTTTTAGATCCTTCAGAACTTCCAACAACCCTCACAGCAACACAAAAAGAAGAAATGAAATTAAATGCCTATGGAACACTAATACTAAACCTTAGTGACAACATAATTAGGCAAGTTCTAGAAGAAGAAACAGCATATAAAGTTTGGATGAAACTAGAAAGCCTATATGCCTCTAAAGATCTCCCAAACAAAATGTACCTAAGGGAAAAAAATTTCACATATAGAATGGATCCTTCTAAAACCTTATCTGAAAACTTAGATGAATTCAAGAAAATAGTTTCAGATTTTAAAACCCTTGAGGACAAACTAAGTGATGAAAATGAGGCATTAAAGAATCAAGAAAAAGAAAAAGATTCTAAAGGGAAACAACCAGAAGTCTCTATAGTAGAAAGCTCTTTTACCTACACAGATGCCTTGGCATCAACCTTAGACCAAGCCAACCATGTCAACCCCTTAGGAAAACATGATTGGGTCCTAGACTCAGGATGCACCTACCATATGACACCTTTTAGAGCATGGTTCAATACCTATAGAGAGATCAGTGGAGAATCTGTGTTCATAGGGAATAATAATGAATGTAACATTGCTGGAATTGGATCAGTTACCATGAAACTAAAAGATAAGACTGTAAAACTCCTTAGAAATGTAAGACATGTTCCTCACCTTAAAAGAAATTTAATCTCCCTAAGAATGTTAGACTCTCTAGGGTGTGAATATAAAGGAAAATGTGGAGTTTTCCAAGTGTTTATGGGATCTAAGTTAGTCTTGGTTGGGGAAAAGGTAAATGATTTGTTCATAATAAAAGGAGTAGAAATGATAGAGGAGGCAAATACAGTTTTATCTCTAAACCTAATAGAAGTTGATATTTGGCATAAAAGATTGTCCCACATTAGTCAGAAGGGTCTTGAGGCACTATCTAAACAGGGCATTCTGCCTCAAGACATATGCAGCAAGTTGTCCTTTTGTGAACACTGTGTACTAGGCAAAACAAGAAAACAAAACTTCACCAAAGCACAACACACAACAAGAGGAATCCTAGACTACATCCATTTGGATCTATGGGGTCCTGCATCCACTCCAAGCCTAAGTGGCTCAAGATATCTTAGAACTGACAATGGTTTGGAGTTTTGTGGAGAGTTGTTTAATAACTTTTGCAGGCAAAGTGGAATAACAAGACACAAAACAGTGACCTACACACCCCAACAAAACAGAGTGGCAGAAAGACTAAACAAAACTATAATGGAAAGGGTAAGGTGTCTATTATCAGATGTCATCCTAAAAGAAAAGTTTTGGGCTGAAGCTGCTGCCTATGTTATGCACACGTTGAACAGAAGCCCTCATACCTCCTTAGTGTTCGGATGTGTAGGGTATGCTCACCAAAATAAAGGGAAACTAAAGGTCAGGGCTGCTAAGTGTATGTTTATTGGTTTCACAGAAGGGGTAAAGGGTTTCAAGTTGTGGCATCCTACTAACAAGAGGTTTATAATCAGTAAAAGCAGCACTGAAGGGAACTTTGATGACACACAATCCTATACTACTCAGATTGAGGTGGAGAATACAGGAAAAAGTGTTCAACCTACTGAGGAACCTACAGCTATTGAACAAGAACAAGTGGAGAACTTAAGTGAAGAACAAGATGAAATGCTTGAAGAACAACCTGACTTGAGCCAATATTCCCTAGCAAGAGACAGACAAAGAAGGATAATTGTCCCTCCAGCCAGGTATGCTGAATCTAATTACATAAGTTTTGTTTTGAATGCTACTGTAGTTCCTAATGATTCAGAACCAAGTTCCTTTGATGAAGCTGTGAACAGTAGCAATGCAAGACAGTGGATTGAAGCTATGAATGAAGAAATAAATTCACTAAATGTGAATGATACTTGGACACTAGCTTCTCTACCTAAAGGATGCAAACCAATAGCATCTAAGTGGATTTTCAAACTCAAAGAAGGAATTACTAAAAACTCGCAACCAAGGTACAAGGCAAGGCTGGTAGCAAAGGGTTTCACTCAAAGAGAAGGTATTGACTATTCTGAAATCTTCTCCCCTGTAGTTAAACAAACCTCTATTAGACTTCTCCTATCCCTAGTTGCTCAAAACAACCTAGAACTGGATCAACTTGATGTAAAAACAACTTTTCTCCATGACTATCTAGAAGAGACAATCTATATGGTTCAACCTAAGGGTTATGAGGTTCAAGGTAAGGAAGACCTCTATTATTTACTAAAGAAGTCTATATATGGGTTAAAACAATCTCCTAGATGTTGGTATAGAAGATTTGATGATTTCATTACTAGTTTAGGTTTTCAAAAAAACTTAAGGGAATCTAAGAAGATCCTAGGTATAGACATCATTAGAGATAGGGACCAATCTACACTGAGCATAAACCAAACATCCTACTGTGAAAAAGTGATAAGAAGATTCAACCTCACTAATGCTAGACCAGTTACTCTCCCTATTGCTCATCATTTTAAGCTATCAGCTGTCAATTCCCCTAGTGAAACTGATATAGAACACAAGCTACAAATGAAAAATGTTCCTTACAGTCAAGCAGTGGGAAGTTTAATGTACCTAATGATCTCTACAAGACCTGATCTATCCTATTCAGCAAGCCTAGTCAGCAAATATATGGCTAATTCTGGAAGAAGACACTGGGAAGCTACTAAATGGATAATCAGATACTTAATTTGGTCAAAGAATGCTAGATTGAACTACCAAAGGACCACTGAAATAGAACTAGAACTAATAGGATATGTAGACTCAGACTTTGCTGGTGACAGTGATAAAAGGAGAAGCCTAACCGGTTACGTTTTTCTCTACGGTCGTAATCTAATAAGTTGGAAAGCAATCCTACAATCCATTGTTGCTCTCTCAACTACCGAAGCAGAATATATTGCACTATCAGAAGGTTCGATTGTTAAAATCTTTTATGACAACCAAAGTGCCATTCGCCTATCCAAAAATCCTCAATACCACAGCCGAACAAAGCACATAGACATAAAATATCACTTCATACGAGAGAAAATTGAAGCTGGAGAAATTCAAGTATTGAAAGTTCATACCTCTGAGAACGCCGCTGATATGCTCACTAAGTCGGTCTCAACATTGAAGCTTCAGAAGTGCTTCGAACTGATAGGTTTCGACCTACCTGAAAAAGGATAG

Coding sequence (CDS)

ATGTCTCCTTCTCCTCCATGCTTTCTTTCATCCTGCACTAATAGAGGCCTAAACCAAAATTATACCTTTAGGCCCAACAAATTGGGAGACTTTGCATTATGGAAAGCAAAGATCAAAGCCTTGCTTGGACAGCAAAAGTCTCATAAAGCCCTTTTAGATCCTTCAGAACTTCCAACAACCCTCACAGCAACACAAAAAGAAGAAATGAAATTAAATGCCTATGGAACACTAATACTAAACCTTAGTGACAACATAATTAGGCAAGTTCTAGAAGAAGAAACAGCATATAAAGTTTGGATGAAACTAGAAAGCCTATATGCCTCTAAAGATCTCCCAAACAAAATGTACCTAAGGGAAAAAAATTTCACATATAGAATGGATCCTTCTAAAACCTTATCTGAAAACTTAGATGAATTCAAGAAAATAGTTTCAGATTTTAAAACCCTTGAGGACAAACTAAGTGATGAAAATGAGGCATTAAAGAATCAAGAAAAAGAAAAAGATTCTAAAGGGAAACAACCAGAAGTCTCTATAGTAGAAAGCTCTTTTACCTACACAGATGCCTTGGCATCAACCTTAGACCAAGCCAACCATGTCAACCCCTTAGGAAAACATGATTGGGTCCTAGACTCAGGATGCACCTACCATATGACACCTTTTAGAGCATGGTTCAATACCTATAGAGAGATCAGTGGAGAATCTGTGTTCATAGGGAATAATAATGAATGTAACATTGCTGGAATTGGATCAGTTACCATGAAACTAAAAGATAAGACTGTAAAACTCCTTAGAAATGTAAGACATGTTCCTCACCTTAAAAGAAATTTAATCTCCCTAAGAATGTTAGACTCTCTAGGGTGTGAATATAAAGGAAAATGTGGAGTTTTCCAAGTGTTTATGGGATCTAAGTTAGTCTTGGTTGGGGAAAAGGTAAATGATTTGTTCATAATAAAAGGAGTAGAAATGATAGAGGAGGCAAATACAGTTTTATCTCTAAACCTAATAGAAGTTGATATTTGGCATAAAAGATTGTCCCACATTAGTCAGAAGGGTCTTGAGGCACTATCTAAACAGGGCATTCTGCCTCAAGACATATGCAGCAAGTTGTCCTTTTGTGAACACTGTGTACTAGGCAAAACAAGAAAACAAAACTTCACCAAAGCACAACACACAACAAGAGGAATCCTAGACTACATCCATTTGGATCTATGGGGTCCTGCATCCACTCCAAGCCTAAGTGGCTCAAGATATCTTAGAACTGACAATGGTTTGGAGTTTTGTGGAGAGTTGTTTAATAACTTTTGCAGGCAAAGTGGAATAACAAGACACAAAACAGTGACCTACACACCCCAACAAAACAGAGTGGCAGAAAGACTAAACAAAACTATAATGGAAAGGGTAAGGTGTCTATTATCAGATGTCATCCTAAAAGAAAAGTTTTGGGCTGAAGCTGCTGCCTATGTTATGCACACGTTGAACAGAAGCCCTCATACCTCCTTAGTGTTCGGATGTGTAGGGTATGCTCACCAAAATAAAGGGAAACTAAAGGTCAGGGCTGCTAAGTGTATGTTTATTGGTTTCACAGAAGGGGTAAAGGGTTTCAAGTTGTGGCATCCTACTAACAAGAGGTTTATAATCAGTAAAAGCAGCACTGAAGGGAACTTTGATGACACACAATCCTATACTACTCAGATTGAGGTGGAGAATACAGGAAAAAGTGTTCAACCTACTGAGGAACCTACAGCTATTGAACAAGAACAAGTGGAGAACTTAAGTGAAGAACAAGATGAAATGCTTGAAGAACAACCTGACTTGAGCCAATATTCCCTAGCAAGAGACAGACAAAGAAGGATAATTGTCCCTCCAGCCAGGTATGCTGAATCTAATTACATAAGTTTTGTTTTGAATGCTACTGTAGTTCCTAATGATTCAGAACCAAGTTCCTTTGATGAAGCTGTGAACAGTAGCAATGCAAGACAGTGGATTGAAGCTATGAATGAAGAAATAAATTCACTAAATGTGAATGATACTTGGACACTAGCTTCTCTACCTAAAGGATGCAAACCAATAGCATCTAAGTGGATTTTCAAACTCAAAGAAGGAATTACTAAAAACTCGCAACCAAGGTACAAGGCAAGGCTGGTAGCAAAGGGTTTCACTCAAAGAGAAGGTATTGACTATTCTGAAATCTTCTCCCCTGTAGTTAAACAAACCTCTATTAGACTTCTCCTATCCCTAGTTGCTCAAAACAACCTAGAACTGGATCAACTTGATGTAAAAACAACTTTTCTCCATGACTATCTAGAAGAGACAATCTATATGGTTCAACCTAAGGGTTATGAGGTTCAAGGTAAGGAAGACCTCTATTATTTACTAAAGAAGTCTATATATGGGTTAAAACAATCTCCTAGATGTTGGTATAGAAGATTTGATGATTTCATTACTAGTTTAGGTTTTCAAAAAAACTTAAGGGAATCTAAGAAGATCCTAGGTATAGACATCATTAGAGATAGGGACCAATCTACACTGAGCATAAACCAAACATCCTACTGTGAAAAAGTGATAAGAAGATTCAACCTCACTAATGCTAGACCAGTTACTCTCCCTATTGCTCATCATTTTAAGCTATCAGCTGTCAATTCCCCTAGTGAAACTGATATAGAACACAAGCTACAAATGAAAAATGTTCCTTACAGTCAAGCAGTGGGAAGTTTAATGTACCTAATGATCTCTACAAGACCTGATCTATCCTATTCAGCAAGCCTAGTCAGCAAATATATGGCTAATTCTGGAAGAAGACACTGGGAAGCTACTAAATGGATAATCAGATACTTAATTTGGTCAAAGAATGCTAGATTGAACTACCAAAGGACCACTGAAATAGAACTAGAACTAATAGGATATGTAGACTCAGACTTTGCTGGTGACAGTGATAAAAGGAGAAGCCTAACCGGTTACGTTTTTCTCTACGGTCGTAATCTAATAAGTTGGAAAGCAATCCTACAATCCATTGTTGCTCTCTCAACTACCGAAGCAGAATATATTGCACTATCAGAAGGTTCGATTGTTAAAATCTTTTATGACAACCAAAGTGCCATTCGCCTATCCAAAAATCCTCAATACCACAGCCGAACAAAGCACATAGACATAAAATATCACTTCATACGAGAGAAAATTGAAGCTGGAGAAATTCAAGTATTGAAAGTTCATACCTCTGAGAACGCCGCTGATATGCTCACTAAGTCGGTCTCAACATTGAAGCTTCAGAAGTGCTTCGAACTGATAGGTTTCGACCTACCTGAAAAAGGATAG

Homology

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BLAST of CSPI03G25110 vs. Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 486.1 bits (1250), Expect = 1.0e-135
Identity = 311/796 (39.07%), Postives = 427/796 (53.64%), Query Frame = 1


Query: 418  LRTDNGLEFCGELFNNFCRQSGITRHKTVTYTPQQNRVAERLNKTIMERVRCLLSDVILK 477
            LR+DNG E+    F  +C   GI   KTV  TPQ N VAER+N+TI+E+VR +L    L 
Sbjct: 547  LRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLP 606

Query: 478  EKFWAEAAAYVMHTLNRSPHTSL--------------------VFGCVGYAH---QNKGK 537
            + FW EA     + +NRSP   L                    VFGC  +AH   + + K
Sbjct: 607  KSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTK 666

Query: 538  LKVRAAKCMFIGFTEGVKGFKLWHPTNKRFIISKSSTEGNFDDTQSYTTQIEVENTGKSV 597
            L  ++  C+FIG+ +   G++LW P  K+ I S+      F +++  T     E     +
Sbjct: 667  LDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVV---FRESEVRTAADMSEKVKNGI 726

Query: 598  QP--------TEEPTAIE------QEQVENLSE--EQDEMLEEQPDLSQYSLARDRQRRI 657
             P        +  PT+ E       EQ E   E  EQ E L+E  +  ++    + Q + 
Sbjct: 727  IPNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQP 786

Query: 658  I-------VPPARYAESNYISFVLNATVVPNDSEPSSFDEAVNSSNARQWIEAMNEEINS 717
            +       V   RY  + Y+       ++ +D EP S  E ++     Q ++AM EE+ S
Sbjct: 787  LRRSERPRVESRRYPSTEYV-------LISDDREPESLKEVLSHPEKNQLMKAMQEEMES 846

Query: 718  LNVNDTWTLASLPKGCKPIASKWIFKL-KEGITKNSQPRYKARLVAKGFTQREGIDYSEI 777
            L  N T+ L  LPKG +P+  KW+FKL K+G  K    RYKARLV KGF Q++GID+ EI
Sbjct: 847  LQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCK--LVRYKARLVVKGFEQKKGIDFDEI 906

Query: 778  FSPVVKQTSIRLLLSLVAQNNLELDQLDVKTTFLHDYLEETIYMVQPKGYEVQGKEDLYY 837
            FSPVVK TSIR +LSL A  +LE++QLDVKT FLH  LEE IYM QP+G+EV GK+ +  
Sbjct: 907  FSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVC 966

Query: 838  LLKKSIYGLKQSPRCWYRRFDDFITSLGFQKNLRES------------------------ 897
             L KS+YGLKQ+PR WY +FD F+ S  + K   +                         
Sbjct: 967  KLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLI 1026

Query: 898  --------KKILGIDIIRDRDQSTLS--------------------INQTSYCEKVIRRF 957
                     K+ G D+ +  D   L                     ++Q  Y E+V+ RF
Sbjct: 1027 VGKDKGLIAKLKG-DLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERF 1086

Query: 958  NLTNARPVTLPIAHHFKLSAVNSPSETDIEHKLQMKNVPYSQAVGSLMYLMISTRPDLSY 1017
            N+ NA+PV+ P+A H KLS    P  T +E K  M  VPYS AVGSLMY M+ TRPD+++
Sbjct: 1087 NMKNAKPVSTPLAGHLKLSKKMCP--TTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAH 1146

Query: 1018 SASLVSKYMANSGRRHWEATKWIIRYLIWSKNARLNYQRTTEIELELIGYVDSDFAGDSD 1077
            +  +VS+++ N G+ HWEA KWI+RYL  +    L +  +  I   L GY D+D AGD D
Sbjct: 1147 AVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPI---LKGYTDADMAGDID 1206

Query: 1078 KRRSLTGYVFLYGRNLISWKAILQSIVALSTTEAEYIALSE---------------GSIV 1097
             R+S TGY+F +    ISW++ LQ  VALSTTEAEYIA +E               G   
Sbjct: 1207 NRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQ 1266

[Close]

BLAST of CSPI03G25110 vs. Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3)

HSP 1 Score: 268.1 bits (684), Expect = 4.3e-70
Identity = 175/527 (33.21%), Postives = 270/527 (51.23%), Query Frame = 1


Query: 634  VLNATVVPNDSEPSSFDEAVNSSNARQWIEAMNEEINSLNVNDTWTLASLPKGCKPIASK 693
            VLNA  + ND  P+SFDE     +   W EA+N E+N+  +N+TWT+   P+    + S+
Sbjct: 880  VLNAHTIFNDV-PNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSR 939

Query: 694  WIFKLKEGITKNSQPRYKARLVAKGFTQREGIDYSEIFSPVVKQTSIRLLLSLVAQNNLE 753
            W+F +K     N   RYKARLVA+GFTQ+  IDY E F+PV + +S R +LSLV Q NL+
Sbjct: 940  WVFSVKYNELGNPI-RYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLK 999

Query: 754  LDQLDVKTTFLHDYLEETIYMVQPKGYEVQGKEDLYYLLKKSIYGLKQSPRCWYRRFDDF 813
            + Q+DVKT FL+  L+E IYM  P+G  +    D    L K+IYGLKQ+ RCW+  F+  
Sbjct: 1000 VHQMDVKTAFLNGTLKEEIYMRLPQG--ISCNSDNVCKLNKAIYGLKQAARCWFEVFEQA 1059

Query: 814  ITSLGF-------------QKNLRESKKILGI--DIIRDRDQSTLSINQTSYCEKVIRRF 873
            +    F             + N+ E+  +L    D++      T   N   Y   ++ +F
Sbjct: 1060 LKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRY---LMEKF 1119

Query: 874  NLTNARPVT--LPIAHHFKLSAVNSPSETDIEHKLQMKNVPYSQAV-------------- 933
             +T+   +   + I    +   +       ++  L   N+    AV              
Sbjct: 1120 RMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLN 1179

Query: 934  -------------GSLMYLMISTRPDLSYSASLVSKYMANSGRRHWEATKWIIRYLIWSK 993
                         G LMY+M+ TRPDL+ + +++S+Y + +    W+  K ++RYL  + 
Sbjct: 1180 SDEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTI 1239

Query: 994  NARLNYQRTTEIELELIGYVDSDFAGDSDKRRSLTGYVF-LYGRNLISWKAILQSIVALS 1053
            + +L +++    E ++IGYVDSD+AG    R+S TGY+F ++  NLI W    Q+ VA S
Sbjct: 1240 DMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAAS 1299

Query: 1054 TTEAEYIALSEG-------------------SIVKIFYDNQSAIRLSKNPQYHSRTKHID 1097
            +TEAEY+AL E                    + +KI+ DNQ  I ++ NP  H R KHID
Sbjct: 1300 STEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCHKRAKHID 1359

[Close]

BLAST of CSPI03G25110 vs. Swiss-Prot
Match: M300_ARATH (Uncharacterized mitochondrial protein AtMg00300 OS=Arabidopsis thaliana GN=AtMg00300 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 7.5e-22
Identity = 50/117 (42.74%), Postives = 71/117 (60.68%), Query Frame = 1


Query: 294 GVFQVFMGSKLVLVGEKVNDLFIIKGVEMIEEANTVLSLNLIEVDIWHKRLSHISQKGLE 353
           GV +V  G + +L G + + L+I++G     E+N   +    E  +WH RL+H+SQ+G+E
Sbjct: 27  GVLKVLKGCRTILKGNRHDSLYILQGSVETGESNLAETAK-DETRLWHSRLAHMSQRGME 86

Query: 354 ALSKQGILPQDICSKLSFCEHCVLGKTRKQNFTKAQHTTRGILDYIHLDLWGPASTP 411
            L K+G L     S L FCE C+ GKT + NF+  QHTT+  LDY+H DLWG  S P
Sbjct: 87  LLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKNPLDYVHSDLWGAPSVP 142

[Close]

BLAST of CSPI03G25110 vs. Swiss-Prot
Match: M810_ARATH (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 4.0e-15
Identity = 62/207 (29.95%), Postives = 105/207 (50.72%), Query Frame = 1


Query: 814  ITSLGFQKNLRESKKILGIDIIRDRDQSTLSINQTSYCEKVIRRFNLTNARPVT--LPIA 873
            ++S    K+L      LGI I      S L ++QT Y E+++    + + +P++  LP+ 
Sbjct: 27   LSSTFSMKDLGPVHYFLGIQI--KTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLPLK 86

Query: 874  HHFKLSAVNSPSETDIEHKLQMKNVPYSQAVGSLMYLMISTRPDLSYSASLVSKYMANSG 933
             +  +S    P  +D           +   VG+L YL + TRPD+SY+ ++V + M    
Sbjct: 87   LNSSVSTAKYPDPSD-----------FRSIVGALQYLTL-TRPDISYAVNIVCQRMHEPT 146

Query: 934  RRHWEATKWIIRYLIWSKNARLNYQRTTEIELELIGYVDSDFAGDSDKRRSLTGYVFLYG 993
               ++  K ++RY+  +    L   + ++  L +  + DSD+AG +  RRS TG+    G
Sbjct: 147  LADFDLLKRVLRYVKGTIFHGLYIHKNSK--LNVQAFCDSDWAGCTSTRRSTTGFCTFLG 206

Query: 994  RNLISWKAILQSIVALSTTEAEYIALS 1019
             N+ISW A  Q  V+ S+TE EY AL+
Sbjct: 207  CNIISWSAKRQPTVSRSSTETEYRALA 217

[Close]

BLAST of CSPI03G25110 vs. Swiss-Prot
Match: M820_ARATH (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 4.1e-12
Identity = 42/96 (43.75%), Postives = 59/96 (61.46%), Query Frame = 1


Query: 661 WIEAMNEEINSLNVNDTWTLASLPKGCKPIASKWIFKLKEGITKNSQPRYKARLVAKGFT 720
           W +AM EE+++L+ N TW L   P     +  KW+FK K   +  +  R KARLVAKGF 
Sbjct: 40  WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLH-SDGTLDRLKARLVAKGFH 99

Query: 721 QREGIDYSEIFSPVVKQTSIRLLLSLVAQNNLELDQ 757
           Q EGI + E +SPVV+  +IR +L++  Q  LE+ Q
Sbjct: 100 QEEGIYFVETYSPVVRTATIRTILNVAQQ--LEVGQ 132

[Close]

BLAST of CSPI03G25110 vs. TrEMBL
Match: A0A151RJN4_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=KK1_035851 PE=4 SV=1)

HSP 1 Score: 668.7 bits (1724), Expect = 1.2e-188
Identity = 418/1184 (35.30%), Postives = 643/1184 (54.31%), Query Frame = 1


Query: 72   NAYGTLILNLSDN----------IIRQVLEEETAYKVWMKLESLYASKDLPNKMYLREKN 131
            ++Y  LI+N+++N          +   +LEEE+  K   K + L +SK       +R ++
Sbjct: 149  DSYDQLIINITNNNVVGRLSFEDVAGAILEEESRRK--NKEDRLESSKQAEALTMMRGRS 208

Query: 132  FTYRMDPSKTLSENLDEFKKIVSDFKTLEDKLSDENEALKNQEKEKDSKGKQPEVSIVES 191
                   S+    +    +K +  +              K+   +K   GK  E S  + 
Sbjct: 209  MERGSSGSQNHGRSKSRGRKNLKCYNC-----GMRGHMKKDCWHKKSGGGKNSEASTSQG 268

Query: 192  ---------SFTYTDALASTLDQANHVNPLGKHDWVLDSGCTYHMTPFRAWFNTYREISG 251
                        Y++A++S  ++  H        W+LDSG T+HMTP R WF TY  ISG
Sbjct: 269  CVASTQEDGEILYSEAISSRGEKQLH------ECWILDSGATWHMTPNRDWFCTYESISG 328

Query: 252  ESVFIGNNNECNIAGIGSVTMKLKDKTVKLLRNVRHVPHLKRNLISLRMLDSLGCEYKGK 311
             SVF+GN++   IAG+G++ +K+ D T++ ++ VRHV  LK+NL+S+  LD L C+   +
Sbjct: 329  GSVFMGNDHALEIAGVGTIKLKMYDGTIRTIQGVRHVKGLKKNLLSIGQLDDLKCKIHVE 388

Query: 312  CGVFQVFMGSKLVLVGEKV-NDLFIIKGVEMIEEANTVLSLNLIEVDI-WHKRLSHISQK 371
             G+ +V  G+ +V+  EK+ ++L+++ G  + E   +V +++  E  + WH+RL H+S++
Sbjct: 389  GGILKVVKGNLVVMKAEKITSNLYLLLGETLQEADASVAAISQEEATMMWHRRLGHMSER 448

Query: 372  GLEALSKQGILPQDICSKLSFCEHCVLGKTRKQNFTKAQHTTRGILDYIHLDLWGPASTP 431
            GL+ L+++ +L       L FCEHCV  K  +  F K    ++ ILD IH D+W      
Sbjct: 449  GLKILAERNLLSGLKMVTLPFCEHCVTSKQHRLQFAKVTTRSKHILDLIHSDVWESPEI- 508

Query: 432  SLSGSRY--------------------------------------------LRTDNGLEF 491
            S+ G++Y                                            LRTDNG E+
Sbjct: 509  SMGGAKYFVSFIDDYSRRLWVYPIKKKSDVFPVFKEFKAQVELDTGKRIKCLRTDNGGEY 568

Query: 492  CGELFNNFCRQSGITRHKTVTYTPQQNRVAERLNKTIMERVRCLLSDVILKEKFWAEAAA 551
                F  FC+Q GI R  TV +TPQQN VAER+N+T++ER R +L    L + FWAEA  
Sbjct: 569  IDGDFLAFCKQEGIKRQFTVAHTPQQNGVAERMNRTLLERTRAMLRTAGLAKSFWAEAVK 628

Query: 552  YVMHTLNRSPHTSL--------------------VFGC---VGYAHQNKGKLKVRAAKCM 611
               + +NRSP T++                    VFGC   V Y  Q + KL  ++ KC+
Sbjct: 629  TACYLINRSPSTAIGLKTPMEMWNGKPSNYSSLHVFGCPVYVMYNSQERTKLDPKSRKCI 688

Query: 612  FIGFTEGVKGFKLWHPTNKRFIISKSSTEGNFDDTQSYTTQIEVENTGKSVQPTEEPTAI 671
            F+G+ + VKG++LW PT ++ ++S+      F +T+    Q E EN   +++ T      
Sbjct: 689  FLGYADNVKGYRLWDPTARKVVVSRDVV---FAETE---LQKEQENDS-TIKDTSIVEIG 748

Query: 672  EQEQVENLSEEQDEMLEEQPDLSQYSLARD--RQRRIIVPPARYAESNYISFVLNATVVP 731
             + + ++ SE + E  E++PD +     +   R+RR     + Y  +++ ++ L    + 
Sbjct: 749  GKSKKDDTSEAEQEHEEQEPDEANDEEVQQIRRERRRPSWHSDYVMASHDAYCL----LT 808

Query: 732  NDSEPSSFDEAVNSSNARQWIEAMNEEINSLNVNDTWTLASLPKGCKPIASKWIFKLKEG 791
             + EPS+F EA+ SS+  QW+ AM+EEI +L+ N TW L  LPKG K I  KW++K+K  
Sbjct: 809  EEGEPSTFQEALRSSDVSQWMAAMHEEIEALHRNKTWELVDLPKGRKAIGCKWVYKIKRD 868

Query: 792  ITKNSQPRYKARLVAKGFTQREGIDYSEIFSPVVKQTSIRLLLSLVAQNNLELDQLDVKT 851
               +   RY+ARLV KG+ Q+EGID++EIFSPVV+ T+IR++L++ A  NL L+QLDVKT
Sbjct: 869  -GNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRVVLAMCAAFNLHLEQLDVKT 928

Query: 852  TFLHDYLEETIYMVQPKGYEVQGKEDLYYLLKKSIYGLKQSPRCWYRRFD---------- 911
             FLH  L+E IYM+QP+G++ QGKE+L   L KS+YGLKQ+PRCWY+RFD          
Sbjct: 929  AFLHGELQEEIYMLQPEGFKEQGKENLVCRLTKSLYGLKQAPRCWYKRFDSFIISLGYNR 988

Query: 912  ----------------------------------DFITSLGFQ-------KNLRESKKIL 971
                                              D I  L  Q       K+L  + KIL
Sbjct: 989  LSSDHCTYYNRFDDNDFIILLLYVDDMLVVGPNKDQIQELKAQLAREFDMKDLGPANKIL 1048

Query: 972  GIDIIRDRDQSTLSINQTSYCEKVIRRFNLTNARPVTLPIAHHFKLSAVNSPSETDIEHK 1031
            G+ I RDR    + ++Q +Y  KV+RRFN+ + +P++ P+  ++KLS+  SPS      +
Sbjct: 1049 GMQIHRDRKNRRIWLSQKNYLLKVLRRFNMQDCKPISTPLPVNYKLSSSMSPSNE--AER 1108

Query: 1032 LQMKNVPYSQAVGSLMYLMISTRPDLSYSASLVSKYMANSGRRHWEATKWIIRYLIWSKN 1091
            ++M  VPY+ AVGSLMY MI TRPD++ +   VS++MA+ GR HW   K I+RY+  + +
Sbjct: 1109 MEMSRVPYASAVGSLMYAMICTRPDIAQAVGAVSRFMADPGREHWSIVKRILRYIKGTSD 1168

Query: 1092 ARLNYQRTTEIELELIGYVDSDFAGDSDKRRSLTGYVFLYGRNLISWKAILQSIVALSTT 1097
              L ++ +   E  + GYVDSDFAGD DKR+S TGYVF      +SW + LQ++VALSTT
Sbjct: 1169 VALCFEGS---EFFVRGYVDSDFAGDLDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTT 1228

[Close]

BLAST of CSPI03G25110 vs. TrEMBL
Match: A0A151TKT1_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=KK1_024014 PE=4 SV=1)

HSP 1 Score: 668.7 bits (1724), Expect = 1.2e-188
Identity = 418/1184 (35.30%), Postives = 643/1184 (54.31%), Query Frame = 1


Query: 72   NAYGTLILNLSDN----------IIRQVLEEETAYKVWMKLESLYASKDLPNKMYLREKN 131
            ++Y  LI+N+++N          +   +LEEE+  K   K + L +SK       +R ++
Sbjct: 100  DSYDQLIINITNNNVVGRLSFEDVAGAILEEESRRK--NKEDRLESSKQAEALTMMRGRS 159

Query: 132  FTYRMDPSKTLSENLDEFKKIVSDFKTLEDKLSDENEALKNQEKEKDSKGKQPEVSIVES 191
                   S+    +    +K +  +              K+   +K   GK  E S  + 
Sbjct: 160  MERGSSGSQNHGRSKSRGRKNLKCYNC-----GMRGHMKKDCWHKKSGGGKNSEASTSQG 219

Query: 192  ---------SFTYTDALASTLDQANHVNPLGKHDWVLDSGCTYHMTPFRAWFNTYREISG 251
                        Y++A++S  ++  H        W+LDSG T+HMTP R WF TY  ISG
Sbjct: 220  CVASTQEDGEILYSEAISSRGEKQLH------ECWILDSGATWHMTPNRDWFCTYESISG 279

Query: 252  ESVFIGNNNECNIAGIGSVTMKLKDKTVKLLRNVRHVPHLKRNLISLRMLDSLGCEYKGK 311
             SVF+GN++   IAG+G++ +K+ D T++ ++ VRHV  LK+NL+S+  LD L C+   +
Sbjct: 280  GSVFMGNDHALEIAGVGTIKLKMYDGTIRTIQGVRHVKGLKKNLLSIGQLDDLKCKIHVE 339

Query: 312  CGVFQVFMGSKLVLVGEKV-NDLFIIKGVEMIEEANTVLSLNLIEVDI-WHKRLSHISQK 371
             G+ +V  G+ +V+  EK+ ++L+++ G  + E   +V +++  E  + WH+RL H+S++
Sbjct: 340  GGILKVVKGNLVVMKAEKITSNLYLLLGETLQEADASVAAISQEEATMMWHRRLGHMSER 399

Query: 372  GLEALSKQGILPQDICSKLSFCEHCVLGKTRKQNFTKAQHTTRGILDYIHLDLWGPASTP 431
            GL+ L+++ +L       L FCEHCV  K  +  F K    ++ ILD IH D+W      
Sbjct: 400  GLKILAERNLLSGLKMVTLPFCEHCVTSKQHRLQFAKVTTRSKHILDLIHSDVWESPEI- 459

Query: 432  SLSGSRY--------------------------------------------LRTDNGLEF 491
            S+ G++Y                                            LRTDNG E+
Sbjct: 460  SMGGAKYFVSFIDDYSRRLWVYPIKKKSDVFPVFKEFKAQVELDTGKRIKCLRTDNGGEY 519

Query: 492  CGELFNNFCRQSGITRHKTVTYTPQQNRVAERLNKTIMERVRCLLSDVILKEKFWAEAAA 551
                F  FC+Q GI R  TV +TPQQN VAER+N+T++ER R +L    L + FWAEA  
Sbjct: 520  IDGDFLAFCKQEGIKRQFTVAHTPQQNGVAERMNRTLLERTRAMLRTAGLAKSFWAEAVK 579

Query: 552  YVMHTLNRSPHTSL--------------------VFGC---VGYAHQNKGKLKVRAAKCM 611
               + +NRSP T++                    VFGC   V Y  Q + KL  ++ KC+
Sbjct: 580  TACYLINRSPSTAIGLKTPMEMWNGKPSNYSSLHVFGCPVYVMYNSQERTKLDPKSRKCI 639

Query: 612  FIGFTEGVKGFKLWHPTNKRFIISKSSTEGNFDDTQSYTTQIEVENTGKSVQPTEEPTAI 671
            F+G+ + VKG++LW PT ++ ++S+      F +T+    Q E EN   +++ T      
Sbjct: 640  FLGYADNVKGYRLWDPTARKVVVSRDVV---FAETE---LQKEQENDS-TIKDTSIVEIG 699

Query: 672  EQEQVENLSEEQDEMLEEQPDLSQYSLARD--RQRRIIVPPARYAESNYISFVLNATVVP 731
             + + ++ SE + E  E++PD +     +   R+RR     + Y  +++ ++ L    + 
Sbjct: 700  GKSKKDDTSEAEQEHEEQEPDEANDEEVQQIRRERRRPSWHSDYVMASHDAYCL----LT 759

Query: 732  NDSEPSSFDEAVNSSNARQWIEAMNEEINSLNVNDTWTLASLPKGCKPIASKWIFKLKEG 791
             + EPS+F EA+ SS+  QW+ AM+EEI +L+ N TW L  LPKG K I  KW++K+K  
Sbjct: 760  EEGEPSTFQEALRSSDVSQWMAAMHEEIEALHRNKTWELVDLPKGRKAIGCKWVYKIKRD 819

Query: 792  ITKNSQPRYKARLVAKGFTQREGIDYSEIFSPVVKQTSIRLLLSLVAQNNLELDQLDVKT 851
               +   RY+ARLV KG+ Q+EGID++EIFSPVV+ T+IR++L++ A  NL L+QLDVKT
Sbjct: 820  -GNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRVVLAMCAAFNLHLEQLDVKT 879

Query: 852  TFLHDYLEETIYMVQPKGYEVQGKEDLYYLLKKSIYGLKQSPRCWYRRFD---------- 911
             FLH  L+E IYM+QP+G++ QGKE+L   L KS+YGLKQ+PRCWY+RFD          
Sbjct: 880  AFLHGELQEEIYMLQPEGFKEQGKENLVCRLTKSLYGLKQAPRCWYKRFDSFIISLGYNR 939

Query: 912  ----------------------------------DFITSLGFQ-------KNLRESKKIL 971
                                              D I  L  Q       K+L  + KIL
Sbjct: 940  LSSDHCTYYNRFDDNDFIILLLYVDDMLVVGPNKDQIQELKAQLAREFDMKDLGPANKIL 999

Query: 972  GIDIIRDRDQSTLSINQTSYCEKVIRRFNLTNARPVTLPIAHHFKLSAVNSPSETDIEHK 1031
            G+ I RDR    + ++Q +Y  KV+RRFN+ + +P++ P+  ++KLS+  SPS      +
Sbjct: 1000 GMQIHRDRKNRRIWLSQKNYLLKVLRRFNMQDCKPISTPLPVNYKLSSSMSPSNE--AER 1059

Query: 1032 LQMKNVPYSQAVGSLMYLMISTRPDLSYSASLVSKYMANSGRRHWEATKWIIRYLIWSKN 1091
            ++M  VPY+ AVGSLMY MI TRPD++ +   VS++MA+ GR HW   K I+RY+  + +
Sbjct: 1060 MEMSRVPYASAVGSLMYAMICTRPDIAQAVGAVSRFMADPGREHWSIVKRILRYIKGTSD 1119

Query: 1092 ARLNYQRTTEIELELIGYVDSDFAGDSDKRRSLTGYVFLYGRNLISWKAILQSIVALSTT 1097
              L ++ +   E  + GYVDSDFAGD DKR+S TGYVF      +SW + LQ++VALSTT
Sbjct: 1120 VALCFEGS---EFFVRGYVDSDFAGDLDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTT 1179

[Close]

BLAST of CSPI03G25110 vs. TrEMBL
Match: A0A151R2G6_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=KK1_042220 PE=4 SV=1)

HSP 1 Score: 667.5 bits (1721), Expect = 2.7e-188
Identity = 417/1184 (35.22%), Postives = 643/1184 (54.31%), Query Frame = 1


Query: 72   NAYGTLILNLSDN----------IIRQVLEEETAYKVWMKLESLYASKDLPNKMYLREKN 131
            ++Y  LI+N+++N          +   +LEEE+  K   K + L +SK       +R ++
Sbjct: 100  DSYDQLIINITNNNVVGRLSFEDVAGAILEEESRRK--NKEDRLESSKQAEALTMMRGRS 159

Query: 132  FTYRMDPSKTLSENLDEFKKIVSDFKTLEDKLSDENEALKNQEKEKDSKGKQPEVSIVES 191
                   S+    +    +K +  +              K+   +K   GK  E S  + 
Sbjct: 160  MERGSSGSQNHGRSKSRGRKNLKCYNC-----GMRGHMKKDCWHKKSGGGKNSEASTSQG 219

Query: 192  ---------SFTYTDALASTLDQANHVNPLGKHDWVLDSGCTYHMTPFRAWFNTYREISG 251
                        Y++A++S  ++  H        W+LDSG T+HMTP R WF TY  ISG
Sbjct: 220  CVASTQEDGEILYSEAISSRGEKQLH------ECWILDSGATWHMTPNRDWFCTYESISG 279

Query: 252  ESVFIGNNNECNIAGIGSVTMKLKDKTVKLLRNVRHVPHLKRNLISLRMLDSLGCEYKGK 311
             SVF+GN++   IAG+G++ +K+ D T++ ++ VRHV  LK+NL+S+  LD L C+   +
Sbjct: 280  GSVFMGNDHALEIAGVGTIKLKMYDGTIRTIQGVRHVKGLKKNLLSIGQLDDLKCKIHVE 339

Query: 312  CGVFQVFMGSKLVLVGEKV-NDLFIIKGVEMIEEANTVLSLNLIEVDI-WHKRLSHISQK 371
             G+ +V  G+ +V+  EK+ ++L+++ G  + E   +V +++  E  + WH+RL H+S++
Sbjct: 340  GGILKVVKGNLVVMKAEKITSNLYLLLGETLQEADASVAAISQEEATMMWHRRLGHMSER 399

Query: 372  GLEALSKQGILPQDICSKLSFCEHCVLGKTRKQNFTKAQHTTRGILDYIHLDLWGPASTP 431
            GL+ L+++ +L       L FCEHCV  K  +  F K    ++ ILD IH D+W      
Sbjct: 400  GLKILAERNLLSGLKMVTLPFCEHCVTSKQHRLQFAKVTTRSKHILDLIHSDVWESPEI- 459

Query: 432  SLSGSRY--------------------------------------------LRTDNGLEF 491
            S+ G++Y                                            LRTDNG E+
Sbjct: 460  SMGGAKYFVSFIDDYSRRLWVYPIKKKSDVFPVFKEFKAQVELDTGKRIKCLRTDNGGEY 519

Query: 492  CGELFNNFCRQSGITRHKTVTYTPQQNRVAERLNKTIMERVRCLLSDVILKEKFWAEAAA 551
                F  FC+Q GI R  TV +TPQQN VAER+N+T++ER R +L    L + FWAEA  
Sbjct: 520  IDGDFLAFCKQEGIKRQFTVAHTPQQNGVAERMNRTLLERTRAMLRTAGLAKSFWAEAVK 579

Query: 552  YVMHTLNRSPHTSL--------------------VFGC---VGYAHQNKGKLKVRAAKCM 611
               + +NRSP T++                    VFGC   V Y  Q + KL  ++ KC+
Sbjct: 580  TACYLINRSPSTAIGLKTPMEMWSGKPSNYSSLHVFGCPVYVMYNSQERTKLDPKSRKCI 639

Query: 612  FIGFTEGVKGFKLWHPTNKRFIISKSSTEGNFDDTQSYTTQIEVENTGKSVQPTEEPTAI 671
            F+G+ + VKG++LW PT ++ ++S+      F +T+    Q E EN   +++ T      
Sbjct: 640  FLGYADNVKGYRLWDPTARKVVVSRDVV---FAETE---LQKEQENDS-TIKDTSIVEIG 699

Query: 672  EQEQVENLSEEQDEMLEEQPDLSQYSLARD--RQRRIIVPPARYAESNYISFVLNATVVP 731
             + + ++ SE + E  E++PD +     +   R+RR     + Y  +++ ++ L    + 
Sbjct: 700  GKSKKDDTSEAEQEHEEQEPDEANDEEVQQIRRERRRPSWHSDYVMASHDAYCL----LT 759

Query: 732  NDSEPSSFDEAVNSSNARQWIEAMNEEINSLNVNDTWTLASLPKGCKPIASKWIFKLKEG 791
             + EPS+F EA+ SS+  QW+ AM+EEI +L+ N TW L  LPKG K I  KW++K+K  
Sbjct: 760  EEGEPSTFQEALRSSDVSQWMAAMHEEIEALHRNKTWELVDLPKGRKAIGCKWVYKIKRD 819

Query: 792  ITKNSQPRYKARLVAKGFTQREGIDYSEIFSPVVKQTSIRLLLSLVAQNNLELDQLDVKT 851
               +   RY+ARLV KG+ Q+EGID++EIFSPVV+ T+IR++L++ A  NL L+QLDVKT
Sbjct: 820  -GNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRVVLAMCAAFNLHLEQLDVKT 879

Query: 852  TFLHDYLEETIYMVQPKGYEVQGKEDLYYLLKKSIYGLKQSPRCWYRRFD---------- 911
             FLH  L+E IYM+QP+G++ QGKE+L   L KS+YGLKQ+PRCWY+RFD          
Sbjct: 880  AFLHGELQEEIYMLQPEGFKEQGKENLVCRLTKSLYGLKQAPRCWYKRFDSFIISLGYNR 939

Query: 912  ----------------------------------DFITSLGFQ-------KNLRESKKIL 971
                                              D I  L  Q       K+L  + KIL
Sbjct: 940  LSSDHCTYYNRFDDNDFIILLLYVDDMLVVGPNKDQIQELKAQLAREFDMKDLGPANKIL 999

Query: 972  GIDIIRDRDQSTLSINQTSYCEKVIRRFNLTNARPVTLPIAHHFKLSAVNSPSETDIEHK 1031
            G+ I RD+    + ++Q +Y  KV+RRFN+ + +P++ P+  ++KLS+  SPS      +
Sbjct: 1000 GMQIHRDKKDRKIWLSQRNYLLKVLRRFNMQDCKPISTPLPVNYKLSSSMSPSNE--AER 1059

Query: 1032 LQMKNVPYSQAVGSLMYLMISTRPDLSYSASLVSKYMANSGRRHWEATKWIIRYLIWSKN 1091
            ++M  VPY+ AVGSLMY MI TRPD++ +   VS++MA+ GR HW   K I+RY+  + +
Sbjct: 1060 MEMSRVPYASAVGSLMYAMICTRPDIAQAVGAVSRFMADPGREHWSIVKRILRYIKGTSD 1119

Query: 1092 ARLNYQRTTEIELELIGYVDSDFAGDSDKRRSLTGYVFLYGRNLISWKAILQSIVALSTT 1097
              L ++ +   E  + GYVDSDFAGD DKR+S TGYVF      +SW + LQ++VALSTT
Sbjct: 1120 VALCFEGS---EFFVRGYVDSDFAGDLDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTT 1179

[Close]

BLAST of CSPI03G25110 vs. TrEMBL
Match: A0A151R6U8_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=KK1_040687 PE=4 SV=1)

HSP 1 Score: 666.8 bits (1719), Expect = 4.7e-188
Identity = 417/1184 (35.22%), Postives = 641/1184 (54.14%), Query Frame = 1


Query: 72   NAYGTLILNLSDN----------IIRQVLEEETAYKVWMKLESLYASKDLPNKMYLREKN 131
            ++Y  LI+N+++N          +   +LEEE+  K   K + L +SK       +R ++
Sbjct: 100  DSYDQLIINITNNNVVGRLSFEDVAGAILEEESRRK--NKEDRLESSKQAEALTMMRGRS 159

Query: 132  FTYRMDPSKTLSENLDEFKKIVSDFKTLEDKLSDENEALKNQEKEKDSKGKQPEVSIVES 191
                   S+    +    +K +  +              K+   +K   GK  E S  + 
Sbjct: 160  MERGSSGSQNHGRSKSRGRKNLKCYNC-----GMRGHMKKDCWHKKSGGGKNSEASTSQG 219

Query: 192  ---------SFTYTDALASTLDQANHVNPLGKHDWVLDSGCTYHMTPFRAWFNTYREISG 251
                        Y++A++S  ++  H        W+LDSG T+HMTP R WF TY  ISG
Sbjct: 220  CVASTQEDGEILYSEAISSRGEKQLH------ECWILDSGATWHMTPNRDWFCTYESISG 279

Query: 252  ESVFIGNNNECNIAGIGSVTMKLKDKTVKLLRNVRHVPHLKRNLISLRMLDSLGCEYKGK 311
             SVF+GN++   IAG+G++ +K+ D T++ ++ VRHV  LK+NL+S+  LD L C+   +
Sbjct: 280  GSVFMGNDHALEIAGVGTIKLKMYDGTIRTIQGVRHVKGLKKNLLSIGQLDDLKCKIHVE 339

Query: 312  CGVFQVFMGSKLVLVGEKV-NDLFIIKGVEMIEEANTVLSLNLIEVDI-WHKRLSHISQK 371
             G+ +V  G+ +V+  EK+ ++L+++ G  + E   +V +++  E  + WH+RL H+S++
Sbjct: 340  GGILKVVKGNLVVMKAEKITSNLYLLLGETLQEADASVAAISQEEATMMWHRRLGHMSER 399

Query: 372  GLEALSKQGILPQDICSKLSFCEHCVLGKTRKQNFTKAQHTTRGILDYIHLDLWGPASTP 431
            GL+ L+++ +L       L FCEHCV  K  +  F K    ++ ILD IH D+W      
Sbjct: 400  GLKILAERNLLSGLKMVTLPFCEHCVTSKQHRLQFAKVTTRSKHILDLIHSDVWESPEI- 459

Query: 432  SLSGSRY--------------------------------------------LRTDNGLEF 491
            S+ G++Y                                            LRTDNG E+
Sbjct: 460  SMGGAKYFVSFIDDYSRRLWVYPIKKKSDVFPVFKEFKAQVELDTGKRIKCLRTDNGGEY 519

Query: 492  CGELFNNFCRQSGITRHKTVTYTPQQNRVAERLNKTIMERVRCLLSDVILKEKFWAEAAA 551
                F  FC+Q GI R  TV +TPQQN VAER+N+T++ER R +L    L + FWAEA  
Sbjct: 520  IDGDFLAFCKQEGIKRQFTVAHTPQQNGVAERMNRTLLERTRAMLRTAGLAKSFWAEAVK 579

Query: 552  YVMHTLNRSPHTSL--------------------VFGC---VGYAHQNKGKLKVRAAKCM 611
               + +NRSP T++                    VFGC   V Y  Q + KL  ++ KC+
Sbjct: 580  TACYLINRSPSTAIGLKTPMEMWNGKPSNYSSLHVFGCPVYVMYNSQERTKLDPKSRKCI 639

Query: 612  FIGFTEGVKGFKLWHPTNKRFIISKSSTEGNFDDTQSYTTQIEVENTGKSVQPTEEPTAI 671
            F+G+ + VKG++LW PT ++ ++S+      F +T+    Q E EN   +++ T      
Sbjct: 640  FLGYADNVKGYRLWDPTARKVVVSRDVV---FAETE---LQKEQENDS-TIKDTSIVEIG 699

Query: 672  EQEQVENLSEEQDEMLEEQPDLSQYSLARDRQRRIIVPP--ARYAESNYISFVLNATVVP 731
             + + ++ SE + E  E++P+       R   R+   P   + Y  +++ ++ L    + 
Sbjct: 700  GKSKEDDTSEAEQEHDEQEPNEDNDGDVRRTTRQTKKPSWHSDYVMASHDAYCL----LT 759

Query: 732  NDSEPSSFDEAVNSSNARQWIEAMNEEINSLNVNDTWTLASLPKGCKPIASKWIFKLKEG 791
             + EPS+F EA+ SS+  QW+ AM+EEI +L+ N TW L  LPKG K I  KW++K+K  
Sbjct: 760  EEGEPSTFQEALRSSDVSQWMAAMHEEIEALHRNKTWELVDLPKGRKAIGCKWVYKIKRD 819

Query: 792  ITKNSQPRYKARLVAKGFTQREGIDYSEIFSPVVKQTSIRLLLSLVAQNNLELDQLDVKT 851
               +   RY+ARLV KG+ Q+EGID++EIFSPVV+ T+IR++L++ A  NL L+QLDVKT
Sbjct: 820  -GNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRVVLAMCAAFNLHLEQLDVKT 879

Query: 852  TFLHDYLEETIYMVQPKGYEVQGKEDLYYLLKKSIYGLKQSPRCWYRRFD---------- 911
             FLH  L+E IYM+QP+G++ QGKE+L   L KS+YGLKQ+PRCWY+RFD          
Sbjct: 880  AFLHGELQEEIYMLQPEGFKEQGKENLVCRLTKSLYGLKQAPRCWYKRFDSFIISLGYNR 939

Query: 912  ----------------------------------DFITSLGFQ-------KNLRESKKIL 971
                                              D I  L  Q       K+L  + KIL
Sbjct: 940  LSSDHCTYYNRFDDNDFIILLLYVDDMLVVGPNKDQIQELKAQLAREFDMKDLGPANKIL 999

Query: 972  GIDIIRDRDQSTLSINQTSYCEKVIRRFNLTNARPVTLPIAHHFKLSAVNSPSETDIEHK 1031
            G+ I RDR    + ++Q +Y  KV+RRFN+ + +P++ P+  ++KLS+  SPS      +
Sbjct: 1000 GMQIHRDRKNRRIWLSQKNYLLKVLRRFNMQDCKPISTPLPVNYKLSSSMSPSNE--AER 1059

Query: 1032 LQMKNVPYSQAVGSLMYLMISTRPDLSYSASLVSKYMANSGRRHWEATKWIIRYLIWSKN 1091
            ++M  VPY+ AVGSLMY MI TRPD++ +   VS++MA+ GR HW   K I+RY+  + +
Sbjct: 1060 MEMSRVPYASAVGSLMYAMICTRPDIAQAVGAVSRFMADPGREHWSIVKRILRYIKGTSD 1119

Query: 1092 ARLNYQRTTEIELELIGYVDSDFAGDSDKRRSLTGYVFLYGRNLISWKAILQSIVALSTT 1097
              L ++ +   E  + GYVDSDFAGD DKR+S TGYVF      +SW + LQ++VALSTT
Sbjct: 1120 VALCFEGS---EFFVRGYVDSDFAGDLDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTT 1179

[Close]

BLAST of CSPI03G25110 vs. TrEMBL
Match: A0A151SDY6_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=KK1_025032 PE=4 SV=1)

HSP 1 Score: 666.4 bits (1718), Expect = 6.1e-188
Identity = 416/1184 (35.14%), Postives = 642/1184 (54.22%), Query Frame = 1


Query: 72   NAYGTLILNLSDN----------IIRQVLEEETAYKVWMKLESLYASKDLPNKMYLREKN 131
            ++Y  LI+N+++N          +   +LEEE+  K   K + L +SK       +R ++
Sbjct: 149  DSYDQLIINITNNNVVGRLSFEDVAGAILEEESRRK--NKEDRLESSKQAEALTMMRGRS 208

Query: 132  FTYRMDPSKTLSENLDEFKKIVSDFKTLEDKLSDENEALKNQEKEKDSKGKQPEVSIVES 191
                   S+    +    +K +  +              K+   +K   GK  E S  + 
Sbjct: 209  MERGSSGSQNHGRSKSRGRKNLKCYNC-----GMRGHMKKDCWHKKSGGGKNSEASTSQG 268

Query: 192  ---------SFTYTDALASTLDQANHVNPLGKHDWVLDSGCTYHMTPFRAWFNTYREISG 251
                        Y++A++S  ++  H        W+LDSG T+HMTP R WF TY  ISG
Sbjct: 269  CVASTQEDGEILYSEAISSRGEKQLH------ECWILDSGATWHMTPNRDWFCTYESISG 328

Query: 252  ESVFIGNNNECNIAGIGSVTMKLKDKTVKLLRNVRHVPHLKRNLISLRMLDSLGCEYKGK 311
             SVF+GN++   IAG+G++ +K+ D T++ ++ VRHV  LK+NL+S+  LD L C+   +
Sbjct: 329  GSVFMGNDHALEIAGVGTIKLKMYDGTIRTIQGVRHVKGLKKNLLSIGQLDDLKCKIHVE 388

Query: 312  CGVFQVFMGSKLVLVGEKV-NDLFIIKGVEMIEEANTVLSLNLIEVDI-WHKRLSHISQK 371
             G+ +V  G+ +V+  EK+ ++L+++ G  + E   +V +++  E  + WH+RL H+S++
Sbjct: 389  GGILKVVKGNLVVMKAEKITSNLYLLLGETLQEADASVAAISQEEATMMWHRRLGHMSER 448

Query: 372  GLEALSKQGILPQDICSKLSFCEHCVLGKTRKQNFTKAQHTTRGILDYIHLDLWGPASTP 431
            GL+ L+++ +L       L FCEHCV  K  +  F K    ++ ILD IH D+W      
Sbjct: 449  GLKILAERNLLSGLKMVTLPFCEHCVTSKQHRLQFAKVTTRSKHILDLIHSDVWESPEI- 508

Query: 432  SLSGSRY--------------------------------------------LRTDNGLEF 491
            S+ G++Y                                            LRTDNG E+
Sbjct: 509  SMGGAKYFVSFIDDYSRRLWVYPIKKKSDVFPVFKEFKAQVELDTGKRIKCLRTDNGGEY 568

Query: 492  CGELFNNFCRQSGITRHKTVTYTPQQNRVAERLNKTIMERVRCLLSDVILKEKFWAEAAA 551
                F  FC+Q GI R  TV +TPQQN VAER+N+T++ER R +L    L + FWAEA  
Sbjct: 569  IDGDFLAFCKQEGIKRQFTVAHTPQQNGVAERMNRTLLERTRAMLRTAGLAKSFWAEAVK 628

Query: 552  YVMHTLNRSPHTSL--------------------VFGC---VGYAHQNKGKLKVRAAKCM 611
               + +NRSP T++                    VFGC   V Y  Q + KL  ++ KC+
Sbjct: 629  TACYLINRSPSTAIGLKTPMEMWSGKPSNYSSLHVFGCPVYVMYNSQERTKLDPKSRKCI 688

Query: 612  FIGFTEGVKGFKLWHPTNKRFIISKSSTEGNFDDTQSYTTQIEVENTGKSVQPTEEPTAI 671
            F+G+ + VKG++LW PT ++ ++S+      F +T+    Q E EN   +++ T      
Sbjct: 689  FLGYADNVKGYRLWDPTARKVVVSRDVV---FAETE---LQKEQENDS-TIKDTSIVEIG 748

Query: 672  EQEQVENLSEEQDEMLEEQPDLSQYSLARD--RQRRIIVPPARYAESNYISFVLNATVVP 731
             + + ++ SE + E  E++PD +     +   R+RR     + Y  +++ ++ L    + 
Sbjct: 749  GKSKKDDTSEAEQEHEEQEPDEANDEEVQQIRRERRRPSWHSDYVMASHDAYCL----LT 808

Query: 732  NDSEPSSFDEAVNSSNARQWIEAMNEEINSLNVNDTWTLASLPKGCKPIASKWIFKLKEG 791
             + EPS+F EA+ SS+  QW+ AM+EEI +L+ N TW L  LPKG K I  KW++K+K  
Sbjct: 809  EEGEPSTFQEALRSSDVSQWMAAMHEEIEALHRNKTWELVDLPKGRKAIGCKWVYKIKRD 868

Query: 792  ITKNSQPRYKARLVAKGFTQREGIDYSEIFSPVVKQTSIRLLLSLVAQNNLELDQLDVKT 851
               +   RY+ARLV KG+ Q+ GID++EIFSPVV+ T+IR++L++ A  NL L+QLDVKT
Sbjct: 869  -GNDQVERYRARLVVKGYAQKAGIDFNEIFSPVVRLTTIRVVLAMCAAFNLHLEQLDVKT 928

Query: 852  TFLHDYLEETIYMVQPKGYEVQGKEDLYYLLKKSIYGLKQSPRCWYRRFD---------- 911
             FLH  L+E IYM+QP+G++ QGKE+L   L KS+YGLKQ+PRCWY+RFD          
Sbjct: 929  AFLHGELQEEIYMLQPEGFKEQGKENLVCRLTKSLYGLKQAPRCWYKRFDSFIISLGYNR 988

Query: 912  ----------------------------------DFITSLGFQ-------KNLRESKKIL 971
                                              D I  L  Q       K+L  + KIL
Sbjct: 989  LSSDHCTYYNRFDDNDFIILLLYVDDMLVVGPNKDQIQELKAQLAREFDMKDLGPANKIL 1048

Query: 972  GIDIIRDRDQSTLSINQTSYCEKVIRRFNLTNARPVTLPIAHHFKLSAVNSPSETDIEHK 1031
            G+ I RDR    + ++Q +Y  KV+RRFN+ + +P++ P+  ++KLS+  SPS      +
Sbjct: 1049 GMQIHRDRKNRRIWLSQKNYLLKVLRRFNMQDCKPISTPLPVNYKLSSSMSPSNE--AER 1108

Query: 1032 LQMKNVPYSQAVGSLMYLMISTRPDLSYSASLVSKYMANSGRRHWEATKWIIRYLIWSKN 1091
            ++M  VPY+ AVGSLMY MI TRPD++ +   VS++MA+ GR HW   K I+RY+  + +
Sbjct: 1109 MEMSRVPYASAVGSLMYAMICTRPDIAQAVGAVSRFMADPGREHWSIVKRILRYIKGTSD 1168

Query: 1092 ARLNYQRTTEIELELIGYVDSDFAGDSDKRRSLTGYVFLYGRNLISWKAILQSIVALSTT 1097
              L ++ +   E  + GYVDSDFAGD DKR+S TGYVF      +SW + LQ++VALSTT
Sbjct: 1169 VALCFEGS---EFVVRGYVDSDFAGDLDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTT 1228

[Close]

BLAST of CSPI03G25110 vs. TAIR10
Match: AT4G23160.1 (AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8)

HSP 1 Score: 146.7 bits (369), Expect = 8.2e-35
Identity = 82/194 (42.27%), Postives = 116/194 (59.79%), Query Frame = 1


Query: 630 YISFVLNATVVPNDSEPSSFDEAVNSSNARQWIEAMNEEINSLNVNDTWTLASLPKGCKP 689
           Y SF++    +    EPS+++EA        W  AM++EI ++    TW + +LP   KP
Sbjct: 73  YHSFLV---CIAKAKEPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKP 132

Query: 690 IASKWIFKLKEGITKNSQPRYKARLVAKGFTQREGIDYSEIFSPVVKQTSIRLLLSLVAQ 749
           I  KW++K+K   +  +  RYKARLVAKG+TQ+EGID+ E FSPV K TS++L+L++ A 
Sbjct: 133 IGCKWVYKIKYN-SDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAI 192

Query: 750 NNLELDQLDVKTTFLHDYLEETIYMVQPKGYEVQGKEDL----YYLLKKSIYGLKQSPRC 809
            N  L QLD+   FL+  L+E IYM  P GY  +  + L       LKKSIYGLKQ+ R 
Sbjct: 193 YNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQ 252

Query: 810 WYRRFDDFITSLGF 820
           W+ +F   +   GF
Sbjct: 253 WFLKFSVTLIGFGF 259

[Close]

BLAST of CSPI03G25110 vs. TAIR10
Match: ATMG00300.1 (ATMG00300.1 Gag-Pol-related retrotransposon family protein)

HSP 1 Score: 107.8 bits (268), Expect = 4.2e-23
Identity = 50/117 (42.74%), Postives = 71/117 (60.68%), Query Frame = 1


Query: 294 GVFQVFMGSKLVLVGEKVNDLFIIKGVEMIEEANTVLSLNLIEVDIWHKRLSHISQKGLE 353
           GV +V  G + +L G + + L+I++G     E+N   +    E  +WH RL+H+SQ+G+E
Sbjct: 27  GVLKVLKGCRTILKGNRHDSLYILQGSVETGESNLAETAK-DETRLWHSRLAHMSQRGME 86

Query: 354 ALSKQGILPQDICSKLSFCEHCVLGKTRKQNFTKAQHTTRGILDYIHLDLWGPASTP 411
            L K+G L     S L FCE C+ GKT + NF+  QHTT+  LDY+H DLWG  S P
Sbjct: 87  LLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKNPLDYVHSDLWGAPSVP 142

[Close]

BLAST of CSPI03G25110 vs. TAIR10
Match: ATMG00810.1 (ATMG00810.1 DNA/RNA polymerases superfamily protein)

HSP 1 Score: 85.5 bits (210), Expect = 2.2e-16
Identity = 62/207 (29.95%), Postives = 105/207 (50.72%), Query Frame = 1


Query: 814  ITSLGFQKNLRESKKILGIDIIRDRDQSTLSINQTSYCEKVIRRFNLTNARPVT--LPIA 873
            ++S    K+L      LGI I      S L ++QT Y E+++    + + +P++  LP+ 
Sbjct: 27   LSSTFSMKDLGPVHYFLGIQI--KTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLPLK 86

Query: 874  HHFKLSAVNSPSETDIEHKLQMKNVPYSQAVGSLMYLMISTRPDLSYSASLVSKYMANSG 933
             +  +S    P  +D           +   VG+L YL + TRPD+SY+ ++V + M    
Sbjct: 87   LNSSVSTAKYPDPSD-----------FRSIVGALQYLTL-TRPDISYAVNIVCQRMHEPT 146

Query: 934  RRHWEATKWIIRYLIWSKNARLNYQRTTEIELELIGYVDSDFAGDSDKRRSLTGYVFLYG 993
               ++  K ++RY+  +    L   + ++  L +  + DSD+AG +  RRS TG+    G
Sbjct: 147  LADFDLLKRVLRYVKGTIFHGLYIHKNSK--LNVQAFCDSDWAGCTSTRRSTTGFCTFLG 206

Query: 994  RNLISWKAILQSIVALSTTEAEYIALS 1019
             N+ISW A  Q  V+ S+TE EY AL+
Sbjct: 207  CNIISWSAKRQPTVSRSSTETEYRALA 217

[Close]

BLAST of CSPI03G25110 vs. TAIR10
Match: ATMG00820.1 (ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase))

HSP 1 Score: 75.5 bits (184), Expect = 2.3e-13
Identity = 42/96 (43.75%), Postives = 59/96 (61.46%), Query Frame = 1


Query: 661 WIEAMNEEINSLNVNDTWTLASLPKGCKPIASKWIFKLKEGITKNSQPRYKARLVAKGFT 720
           W +AM EE+++L+ N TW L   P     +  KW+FK K   +  +  R KARLVAKGF 
Sbjct: 40  WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLH-SDGTLDRLKARLVAKGFH 99

Query: 721 QREGIDYSEIFSPVVKQTSIRLLLSLVAQNNLELDQ 757
           Q EGI + E +SPVV+  +IR +L++  Q  LE+ Q
Sbjct: 100 QEEGIYFVETYSPVVRTATIRTILNVAQQ--LEVGQ 132

[Close]

BLAST of CSPI03G25110 vs. TAIR10
Match: ATMG00710.1 (ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 50.4 bits (119), Expect = 8.0e-06
Identity = 29/83 (34.94%), Postives = 44/83 (53.01%), Query Frame = 1


Query: 459 LNKTIMERVRCLLSDVILKEKFWAEAAAYVMHTLNRSPHTSLVF---------------- 518
           +N+TI+E+VR +L +  L + F A+AA   +H +N+ P T++ F                
Sbjct: 1   MNRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSY 60

Query: 519 ----GCVGYAHQNKGKLKVRAAK 522
               GCV Y H ++GKLK RA K
Sbjct: 61  LRRFGCVAYIHCDEGKLKPRAKK 83

[Close]

BLAST of CSPI03G25110 vs. NCBI nr
Match: gi|1012331264|gb|KYP42748.1| (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan])

HSP 1 Score: 668.7 bits (1724), Expect = 1.8e-188
Identity = 418/1184 (35.30%), Postives = 643/1184 (54.31%), Query Frame = 1


Query: 72   NAYGTLILNLSDN----------IIRQVLEEETAYKVWMKLESLYASKDLPNKMYLREKN 131
            ++Y  LI+N+++N          +   +LEEE+  K   K + L +SK       +R ++
Sbjct: 149  DSYDQLIINITNNNVVGRLSFEDVAGAILEEESRRK--NKEDRLESSKQAEALTMMRGRS 208

Query: 132  FTYRMDPSKTLSENLDEFKKIVSDFKTLEDKLSDENEALKNQEKEKDSKGKQPEVSIVES 191
                   S+    +    +K +  +              K+   +K   GK  E S  + 
Sbjct: 209  MERGSSGSQNHGRSKSRGRKNLKCYNC-----GMRGHMKKDCWHKKSGGGKNSEASTSQG 268

Query: 192  ---------SFTYTDALASTLDQANHVNPLGKHDWVLDSGCTYHMTPFRAWFNTYREISG 251
                        Y++A++S  ++  H        W+LDSG T+HMTP R WF TY  ISG
Sbjct: 269  CVASTQEDGEILYSEAISSRGEKQLH------ECWILDSGATWHMTPNRDWFCTYESISG 328

Query: 252  ESVFIGNNNECNIAGIGSVTMKLKDKTVKLLRNVRHVPHLKRNLISLRMLDSLGCEYKGK 311
             SVF+GN++   IAG+G++ +K+ D T++ ++ VRHV  LK+NL+S+  LD L C+   +
Sbjct: 329  GSVFMGNDHALEIAGVGTIKLKMYDGTIRTIQGVRHVKGLKKNLLSIGQLDDLKCKIHVE 388

Query: 312  CGVFQVFMGSKLVLVGEKV-NDLFIIKGVEMIEEANTVLSLNLIEVDI-WHKRLSHISQK 371
             G+ +V  G+ +V+  EK+ ++L+++ G  + E   +V +++  E  + WH+RL H+S++
Sbjct: 389  GGILKVVKGNLVVMKAEKITSNLYLLLGETLQEADASVAAISQEEATMMWHRRLGHMSER 448

Query: 372  GLEALSKQGILPQDICSKLSFCEHCVLGKTRKQNFTKAQHTTRGILDYIHLDLWGPASTP 431
            GL+ L+++ +L       L FCEHCV  K  +  F K    ++ ILD IH D+W      
Sbjct: 449  GLKILAERNLLSGLKMVTLPFCEHCVTSKQHRLQFAKVTTRSKHILDLIHSDVWESPEI- 508

Query: 432  SLSGSRY--------------------------------------------LRTDNGLEF 491
            S+ G++Y                                            LRTDNG E+
Sbjct: 509  SMGGAKYFVSFIDDYSRRLWVYPIKKKSDVFPVFKEFKAQVELDTGKRIKCLRTDNGGEY 568

Query: 492  CGELFNNFCRQSGITRHKTVTYTPQQNRVAERLNKTIMERVRCLLSDVILKEKFWAEAAA 551
                F  FC+Q GI R  TV +TPQQN VAER+N+T++ER R +L    L + FWAEA  
Sbjct: 569  IDGDFLAFCKQEGIKRQFTVAHTPQQNGVAERMNRTLLERTRAMLRTAGLAKSFWAEAVK 628

Query: 552  YVMHTLNRSPHTSL--------------------VFGC---VGYAHQNKGKLKVRAAKCM 611
               + +NRSP T++                    VFGC   V Y  Q + KL  ++ KC+
Sbjct: 629  TACYLINRSPSTAIGLKTPMEMWNGKPSNYSSLHVFGCPVYVMYNSQERTKLDPKSRKCI 688

Query: 612  FIGFTEGVKGFKLWHPTNKRFIISKSSTEGNFDDTQSYTTQIEVENTGKSVQPTEEPTAI 671
            F+G+ + VKG++LW PT ++ ++S+      F +T+    Q E EN   +++ T      
Sbjct: 689  FLGYADNVKGYRLWDPTARKVVVSRDVV---FAETE---LQKEQENDS-TIKDTSIVEIG 748

Query: 672  EQEQVENLSEEQDEMLEEQPDLSQYSLARD--RQRRIIVPPARYAESNYISFVLNATVVP 731
             + + ++ SE + E  E++PD +     +   R+RR     + Y  +++ ++ L    + 
Sbjct: 749  GKSKKDDTSEAEQEHEEQEPDEANDEEVQQIRRERRRPSWHSDYVMASHDAYCL----LT 808

Query: 732  NDSEPSSFDEAVNSSNARQWIEAMNEEINSLNVNDTWTLASLPKGCKPIASKWIFKLKEG 791
             + EPS+F EA+ SS+  QW+ AM+EEI +L+ N TW L  LPKG K I  KW++K+K  
Sbjct: 809  EEGEPSTFQEALRSSDVSQWMAAMHEEIEALHRNKTWELVDLPKGRKAIGCKWVYKIKRD 868

Query: 792  ITKNSQPRYKARLVAKGFTQREGIDYSEIFSPVVKQTSIRLLLSLVAQNNLELDQLDVKT 851
               +   RY+ARLV KG+ Q+EGID++EIFSPVV+ T+IR++L++ A  NL L+QLDVKT
Sbjct: 869  -GNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRVVLAMCAAFNLHLEQLDVKT 928

Query: 852  TFLHDYLEETIYMVQPKGYEVQGKEDLYYLLKKSIYGLKQSPRCWYRRFD---------- 911
             FLH  L+E IYM+QP+G++ QGKE+L   L KS+YGLKQ+PRCWY+RFD          
Sbjct: 929  AFLHGELQEEIYMLQPEGFKEQGKENLVCRLTKSLYGLKQAPRCWYKRFDSFIISLGYNR 988

Query: 912  ----------------------------------DFITSLGFQ-------KNLRESKKIL 971
                                              D I  L  Q       K+L  + KIL
Sbjct: 989  LSSDHCTYYNRFDDNDFIILLLYVDDMLVVGPNKDQIQELKAQLAREFDMKDLGPANKIL 1048

Query: 972  GIDIIRDRDQSTLSINQTSYCEKVIRRFNLTNARPVTLPIAHHFKLSAVNSPSETDIEHK 1031
            G+ I RDR    + ++Q +Y  KV+RRFN+ + +P++ P+  ++KLS+  SPS      +
Sbjct: 1049 GMQIHRDRKNRRIWLSQKNYLLKVLRRFNMQDCKPISTPLPVNYKLSSSMSPSNE--AER 1108

Query: 1032 LQMKNVPYSQAVGSLMYLMISTRPDLSYSASLVSKYMANSGRRHWEATKWIIRYLIWSKN 1091
            ++M  VPY+ AVGSLMY MI TRPD++ +   VS++MA+ GR HW   K I+RY+  + +
Sbjct: 1109 MEMSRVPYASAVGSLMYAMICTRPDIAQAVGAVSRFMADPGREHWSIVKRILRYIKGTSD 1168

Query: 1092 ARLNYQRTTEIELELIGYVDSDFAGDSDKRRSLTGYVFLYGRNLISWKAILQSIVALSTT 1097
              L ++ +   E  + GYVDSDFAGD DKR+S TGYVF      +SW + LQ++VALSTT
Sbjct: 1169 VALCFEGS---EFFVRGYVDSDFAGDLDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTT 1228

[Close]

BLAST of CSPI03G25110 vs. NCBI nr
Match: gi|1012356478|gb|KYP67664.1| (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan])

HSP 1 Score: 668.7 bits (1724), Expect = 1.8e-188
Identity = 418/1184 (35.30%), Postives = 643/1184 (54.31%), Query Frame = 1


Query: 72   NAYGTLILNLSDN----------IIRQVLEEETAYKVWMKLESLYASKDLPNKMYLREKN 131
            ++Y  LI+N+++N          +   +LEEE+  K   K + L +SK       +R ++
Sbjct: 100  DSYDQLIINITNNNVVGRLSFEDVAGAILEEESRRK--NKEDRLESSKQAEALTMMRGRS 159

Query: 132  FTYRMDPSKTLSENLDEFKKIVSDFKTLEDKLSDENEALKNQEKEKDSKGKQPEVSIVES 191
                   S+    +    +K +  +              K+   +K   GK  E S  + 
Sbjct: 160  MERGSSGSQNHGRSKSRGRKNLKCYNC-----GMRGHMKKDCWHKKSGGGKNSEASTSQG 219

Query: 192  ---------SFTYTDALASTLDQANHVNPLGKHDWVLDSGCTYHMTPFRAWFNTYREISG 251
                        Y++A++S  ++  H        W+LDSG T+HMTP R WF TY  ISG
Sbjct: 220  CVASTQEDGEILYSEAISSRGEKQLH------ECWILDSGATWHMTPNRDWFCTYESISG 279

Query: 252  ESVFIGNNNECNIAGIGSVTMKLKDKTVKLLRNVRHVPHLKRNLISLRMLDSLGCEYKGK 311
             SVF+GN++   IAG+G++ +K+ D T++ ++ VRHV  LK+NL+S+  LD L C+   +
Sbjct: 280  GSVFMGNDHALEIAGVGTIKLKMYDGTIRTIQGVRHVKGLKKNLLSIGQLDDLKCKIHVE 339

Query: 312  CGVFQVFMGSKLVLVGEKV-NDLFIIKGVEMIEEANTVLSLNLIEVDI-WHKRLSHISQK 371
             G+ +V  G+ +V+  EK+ ++L+++ G  + E   +V +++  E  + WH+RL H+S++
Sbjct: 340  GGILKVVKGNLVVMKAEKITSNLYLLLGETLQEADASVAAISQEEATMMWHRRLGHMSER 399

Query: 372  GLEALSKQGILPQDICSKLSFCEHCVLGKTRKQNFTKAQHTTRGILDYIHLDLWGPASTP 431
            GL+ L+++ +L       L FCEHCV  K  +  F K    ++ ILD IH D+W      
Sbjct: 400  GLKILAERNLLSGLKMVTLPFCEHCVTSKQHRLQFAKVTTRSKHILDLIHSDVWESPEI- 459

Query: 432  SLSGSRY--------------------------------------------LRTDNGLEF 491
            S+ G++Y                                            LRTDNG E+
Sbjct: 460  SMGGAKYFVSFIDDYSRRLWVYPIKKKSDVFPVFKEFKAQVELDTGKRIKCLRTDNGGEY 519

Query: 492  CGELFNNFCRQSGITRHKTVTYTPQQNRVAERLNKTIMERVRCLLSDVILKEKFWAEAAA 551
                F  FC+Q GI R  TV +TPQQN VAER+N+T++ER R +L    L + FWAEA  
Sbjct: 520  IDGDFLAFCKQEGIKRQFTVAHTPQQNGVAERMNRTLLERTRAMLRTAGLAKSFWAEAVK 579

Query: 552  YVMHTLNRSPHTSL--------------------VFGC---VGYAHQNKGKLKVRAAKCM 611
               + +NRSP T++                    VFGC   V Y  Q + KL  ++ KC+
Sbjct: 580  TACYLINRSPSTAIGLKTPMEMWNGKPSNYSSLHVFGCPVYVMYNSQERTKLDPKSRKCI 639

Query: 612  FIGFTEGVKGFKLWHPTNKRFIISKSSTEGNFDDTQSYTTQIEVENTGKSVQPTEEPTAI 671
            F+G+ + VKG++LW PT ++ ++S+      F +T+    Q E EN   +++ T      
Sbjct: 640  FLGYADNVKGYRLWDPTARKVVVSRDVV---FAETE---LQKEQENDS-TIKDTSIVEIG 699

Query: 672  EQEQVENLSEEQDEMLEEQPDLSQYSLARD--RQRRIIVPPARYAESNYISFVLNATVVP 731
             + + ++ SE + E  E++PD +     +   R+RR     + Y  +++ ++ L    + 
Sbjct: 700  GKSKKDDTSEAEQEHEEQEPDEANDEEVQQIRRERRRPSWHSDYVMASHDAYCL----LT 759

Query: 732  NDSEPSSFDEAVNSSNARQWIEAMNEEINSLNVNDTWTLASLPKGCKPIASKWIFKLKEG 791
             + EPS+F EA+ SS+  QW+ AM+EEI +L+ N TW L  LPKG K I  KW++K+K  
Sbjct: 760  EEGEPSTFQEALRSSDVSQWMAAMHEEIEALHRNKTWELVDLPKGRKAIGCKWVYKIKRD 819

Query: 792  ITKNSQPRYKARLVAKGFTQREGIDYSEIFSPVVKQTSIRLLLSLVAQNNLELDQLDVKT 851
               +   RY+ARLV KG+ Q+EGID++EIFSPVV+ T+IR++L++ A  NL L+QLDVKT
Sbjct: 820  -GNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRVVLAMCAAFNLHLEQLDVKT 879

Query: 852  TFLHDYLEETIYMVQPKGYEVQGKEDLYYLLKKSIYGLKQSPRCWYRRFD---------- 911
             FLH  L+E IYM+QP+G++ QGKE+L   L KS+YGLKQ+PRCWY+RFD          
Sbjct: 880  AFLHGELQEEIYMLQPEGFKEQGKENLVCRLTKSLYGLKQAPRCWYKRFDSFIISLGYNR 939

Query: 912  ----------------------------------DFITSLGFQ-------KNLRESKKIL 971
                                              D I  L  Q       K+L  + KIL
Sbjct: 940  LSSDHCTYYNRFDDNDFIILLLYVDDMLVVGPNKDQIQELKAQLAREFDMKDLGPANKIL 999

Query: 972  GIDIIRDRDQSTLSINQTSYCEKVIRRFNLTNARPVTLPIAHHFKLSAVNSPSETDIEHK 1031
            G+ I RDR    + ++Q +Y  KV+RRFN+ + +P++ P+  ++KLS+  SPS      +
Sbjct: 1000 GMQIHRDRKNRRIWLSQKNYLLKVLRRFNMQDCKPISTPLPVNYKLSSSMSPSNE--AER 1059

Query: 1032 LQMKNVPYSQAVGSLMYLMISTRPDLSYSASLVSKYMANSGRRHWEATKWIIRYLIWSKN 1091
            ++M  VPY+ AVGSLMY MI TRPD++ +   VS++MA+ GR HW   K I+RY+  + +
Sbjct: 1060 MEMSRVPYASAVGSLMYAMICTRPDIAQAVGAVSRFMADPGREHWSIVKRILRYIKGTSD 1119

Query: 1092 ARLNYQRTTEIELELIGYVDSDFAGDSDKRRSLTGYVFLYGRNLISWKAILQSIVALSTT 1097
              L ++ +   E  + GYVDSDFAGD DKR+S TGYVF      +SW + LQ++VALSTT
Sbjct: 1120 VALCFEGS---EFFVRGYVDSDFAGDLDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTT 1179

[Close]

BLAST of CSPI03G25110 vs. NCBI nr
Match: gi|1012324677|gb|KYP36645.1| (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan])

HSP 1 Score: 667.5 bits (1721), Expect = 3.9e-188
Identity = 417/1184 (35.22%), Postives = 643/1184 (54.31%), Query Frame = 1


Query: 72   NAYGTLILNLSDN----------IIRQVLEEETAYKVWMKLESLYASKDLPNKMYLREKN 131
            ++Y  LI+N+++N          +   +LEEE+  K   K + L +SK       +R ++
Sbjct: 100  DSYDQLIINITNNNVVGRLSFEDVAGAILEEESRRK--NKEDRLESSKQAEALTMMRGRS 159

Query: 132  FTYRMDPSKTLSENLDEFKKIVSDFKTLEDKLSDENEALKNQEKEKDSKGKQPEVSIVES 191
                   S+    +    +K +  +              K+   +K   GK  E S  + 
Sbjct: 160  MERGSSGSQNHGRSKSRGRKNLKCYNC-----GMRGHMKKDCWHKKSGGGKNSEASTSQG 219

Query: 192  ---------SFTYTDALASTLDQANHVNPLGKHDWVLDSGCTYHMTPFRAWFNTYREISG 251
                        Y++A++S  ++  H        W+LDSG T+HMTP R WF TY  ISG
Sbjct: 220  CVASTQEDGEILYSEAISSRGEKQLH------ECWILDSGATWHMTPNRDWFCTYESISG 279

Query: 252  ESVFIGNNNECNIAGIGSVTMKLKDKTVKLLRNVRHVPHLKRNLISLRMLDSLGCEYKGK 311
             SVF+GN++   IAG+G++ +K+ D T++ ++ VRHV  LK+NL+S+  LD L C+   +
Sbjct: 280  GSVFMGNDHALEIAGVGTIKLKMYDGTIRTIQGVRHVKGLKKNLLSIGQLDDLKCKIHVE 339

Query: 312  CGVFQVFMGSKLVLVGEKV-NDLFIIKGVEMIEEANTVLSLNLIEVDI-WHKRLSHISQK 371
             G+ +V  G+ +V+  EK+ ++L+++ G  + E   +V +++  E  + WH+RL H+S++
Sbjct: 340  GGILKVVKGNLVVMKAEKITSNLYLLLGETLQEADASVAAISQEEATMMWHRRLGHMSER 399

Query: 372  GLEALSKQGILPQDICSKLSFCEHCVLGKTRKQNFTKAQHTTRGILDYIHLDLWGPASTP 431
            GL+ L+++ +L       L FCEHCV  K  +  F K    ++ ILD IH D+W      
Sbjct: 400  GLKILAERNLLSGLKMVTLPFCEHCVTSKQHRLQFAKVTTRSKHILDLIHSDVWESPEI- 459

Query: 432  SLSGSRY--------------------------------------------LRTDNGLEF 491
            S+ G++Y                                            LRTDNG E+
Sbjct: 460  SMGGAKYFVSFIDDYSRRLWVYPIKKKSDVFPVFKEFKAQVELDTGKRIKCLRTDNGGEY 519

Query: 492  CGELFNNFCRQSGITRHKTVTYTPQQNRVAERLNKTIMERVRCLLSDVILKEKFWAEAAA 551
                F  FC+Q GI R  TV +TPQQN VAER+N+T++ER R +L    L + FWAEA  
Sbjct: 520  IDGDFLAFCKQEGIKRQFTVAHTPQQNGVAERMNRTLLERTRAMLRTAGLAKSFWAEAVK 579

Query: 552  YVMHTLNRSPHTSL--------------------VFGC---VGYAHQNKGKLKVRAAKCM 611
               + +NRSP T++                    VFGC   V Y  Q + KL  ++ KC+
Sbjct: 580  TACYLINRSPSTAIGLKTPMEMWSGKPSNYSSLHVFGCPVYVMYNSQERTKLDPKSRKCI 639

Query: 612  FIGFTEGVKGFKLWHPTNKRFIISKSSTEGNFDDTQSYTTQIEVENTGKSVQPTEEPTAI 671
            F+G+ + VKG++LW PT ++ ++S+      F +T+    Q E EN   +++ T      
Sbjct: 640  FLGYADNVKGYRLWDPTARKVVVSRDVV---FAETE---LQKEQENDS-TIKDTSIVEIG 699

Query: 672  EQEQVENLSEEQDEMLEEQPDLSQYSLARD--RQRRIIVPPARYAESNYISFVLNATVVP 731
             + + ++ SE + E  E++PD +     +   R+RR     + Y  +++ ++ L    + 
Sbjct: 700  GKSKKDDTSEAEQEHEEQEPDEANDEEVQQIRRERRRPSWHSDYVMASHDAYCL----LT 759

Query: 732  NDSEPSSFDEAVNSSNARQWIEAMNEEINSLNVNDTWTLASLPKGCKPIASKWIFKLKEG 791
             + EPS+F EA+ SS+  QW+ AM+EEI +L+ N TW L  LPKG K I  KW++K+K  
Sbjct: 760  EEGEPSTFQEALRSSDVSQWMAAMHEEIEALHRNKTWELVDLPKGRKAIGCKWVYKIKRD 819

Query: 792  ITKNSQPRYKARLVAKGFTQREGIDYSEIFSPVVKQTSIRLLLSLVAQNNLELDQLDVKT 851
               +   RY+ARLV KG+ Q+EGID++EIFSPVV+ T+IR++L++ A  NL L+QLDVKT
Sbjct: 820  -GNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRVVLAMCAAFNLHLEQLDVKT 879

Query: 852  TFLHDYLEETIYMVQPKGYEVQGKEDLYYLLKKSIYGLKQSPRCWYRRFD---------- 911
             FLH  L+E IYM+QP+G++ QGKE+L   L KS+YGLKQ+PRCWY+RFD          
Sbjct: 880  AFLHGELQEEIYMLQPEGFKEQGKENLVCRLTKSLYGLKQAPRCWYKRFDSFIISLGYNR 939

Query: 912  ----------------------------------DFITSLGFQ-------KNLRESKKIL 971
                                              D I  L  Q       K+L  + KIL
Sbjct: 940  LSSDHCTYYNRFDDNDFIILLLYVDDMLVVGPNKDQIQELKAQLAREFDMKDLGPANKIL 999

Query: 972  GIDIIRDRDQSTLSINQTSYCEKVIRRFNLTNARPVTLPIAHHFKLSAVNSPSETDIEHK 1031
            G+ I RD+    + ++Q +Y  KV+RRFN+ + +P++ P+  ++KLS+  SPS      +
Sbjct: 1000 GMQIHRDKKDRKIWLSQRNYLLKVLRRFNMQDCKPISTPLPVNYKLSSSMSPSNE--AER 1059

Query: 1032 LQMKNVPYSQAVGSLMYLMISTRPDLSYSASLVSKYMANSGRRHWEATKWIIRYLIWSKN 1091
            ++M  VPY+ AVGSLMY MI TRPD++ +   VS++MA+ GR HW   K I+RY+  + +
Sbjct: 1060 MEMSRVPYASAVGSLMYAMICTRPDIAQAVGAVSRFMADPGREHWSIVKRILRYIKGTSD 1119

Query: 1092 ARLNYQRTTEIELELIGYVDSDFAGDSDKRRSLTGYVFLYGRNLISWKAILQSIVALSTT 1097
              L ++ +   E  + GYVDSDFAGD DKR+S TGYVF      +SW + LQ++VALSTT
Sbjct: 1120 VALCFEGS---EFFVRGYVDSDFAGDLDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTT 1179

[Close]

BLAST of CSPI03G25110 vs. NCBI nr
Match: gi|1012326275|gb|KYP38095.1| (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan])

HSP 1 Score: 666.8 bits (1719), Expect = 6.7e-188
Identity = 417/1184 (35.22%), Postives = 641/1184 (54.14%), Query Frame = 1


Query: 72   NAYGTLILNLSDN----------IIRQVLEEETAYKVWMKLESLYASKDLPNKMYLREKN 131
            ++Y  LI+N+++N          +   +LEEE+  K   K + L +SK       +R ++
Sbjct: 100  DSYDQLIINITNNNVVGRLSFEDVAGAILEEESRRK--NKEDRLESSKQAEALTMMRGRS 159

Query: 132  FTYRMDPSKTLSENLDEFKKIVSDFKTLEDKLSDENEALKNQEKEKDSKGKQPEVSIVES 191
                   S+    +    +K +  +              K+   +K   GK  E S  + 
Sbjct: 160  MERGSSGSQNHGRSKSRGRKNLKCYNC-----GMRGHMKKDCWHKKSGGGKNSEASTSQG 219

Query: 192  ---------SFTYTDALASTLDQANHVNPLGKHDWVLDSGCTYHMTPFRAWFNTYREISG 251
                        Y++A++S  ++  H        W+LDSG T+HMTP R WF TY  ISG
Sbjct: 220  CVASTQEDGEILYSEAISSRGEKQLH------ECWILDSGATWHMTPNRDWFCTYESISG 279

Query: 252  ESVFIGNNNECNIAGIGSVTMKLKDKTVKLLRNVRHVPHLKRNLISLRMLDSLGCEYKGK 311
             SVF+GN++   IAG+G++ +K+ D T++ ++ VRHV  LK+NL+S+  LD L C+   +
Sbjct: 280  GSVFMGNDHALEIAGVGTIKLKMYDGTIRTIQGVRHVKGLKKNLLSIGQLDDLKCKIHVE 339

Query: 312  CGVFQVFMGSKLVLVGEKV-NDLFIIKGVEMIEEANTVLSLNLIEVDI-WHKRLSHISQK 371
             G+ +V  G+ +V+  EK+ ++L+++ G  + E   +V +++  E  + WH+RL H+S++
Sbjct: 340  GGILKVVKGNLVVMKAEKITSNLYLLLGETLQEADASVAAISQEEATMMWHRRLGHMSER 399

Query: 372  GLEALSKQGILPQDICSKLSFCEHCVLGKTRKQNFTKAQHTTRGILDYIHLDLWGPASTP 431
            GL+ L+++ +L       L FCEHCV  K  +  F K    ++ ILD IH D+W      
Sbjct: 400  GLKILAERNLLSGLKMVTLPFCEHCVTSKQHRLQFAKVTTRSKHILDLIHSDVWESPEI- 459

Query: 432  SLSGSRY--------------------------------------------LRTDNGLEF 491
            S+ G++Y                                            LRTDNG E+
Sbjct: 460  SMGGAKYFVSFIDDYSRRLWVYPIKKKSDVFPVFKEFKAQVELDTGKRIKCLRTDNGGEY 519

Query: 492  CGELFNNFCRQSGITRHKTVTYTPQQNRVAERLNKTIMERVRCLLSDVILKEKFWAEAAA 551
                F  FC+Q GI R  TV +TPQQN VAER+N+T++ER R +L    L + FWAEA  
Sbjct: 520  IDGDFLAFCKQEGIKRQFTVAHTPQQNGVAERMNRTLLERTRAMLRTAGLAKSFWAEAVK 579

Query: 552  YVMHTLNRSPHTSL--------------------VFGC---VGYAHQNKGKLKVRAAKCM 611
               + +NRSP T++                    VFGC   V Y  Q + KL  ++ KC+
Sbjct: 580  TACYLINRSPSTAIGLKTPMEMWNGKPSNYSSLHVFGCPVYVMYNSQERTKLDPKSRKCI 639

Query: 612  FIGFTEGVKGFKLWHPTNKRFIISKSSTEGNFDDTQSYTTQIEVENTGKSVQPTEEPTAI 671
            F+G+ + VKG++LW PT ++ ++S+      F +T+    Q E EN   +++ T      
Sbjct: 640  FLGYADNVKGYRLWDPTARKVVVSRDVV---FAETE---LQKEQENDS-TIKDTSIVEIG 699

Query: 672  EQEQVENLSEEQDEMLEEQPDLSQYSLARDRQRRIIVPP--ARYAESNYISFVLNATVVP 731
             + + ++ SE + E  E++P+       R   R+   P   + Y  +++ ++ L    + 
Sbjct: 700  GKSKEDDTSEAEQEHDEQEPNEDNDGDVRRTTRQTKKPSWHSDYVMASHDAYCL----LT 759

Query: 732  NDSEPSSFDEAVNSSNARQWIEAMNEEINSLNVNDTWTLASLPKGCKPIASKWIFKLKEG 791
             + EPS+F EA+ SS+  QW+ AM+EEI +L+ N TW L  LPKG K I  KW++K+K  
Sbjct: 760  EEGEPSTFQEALRSSDVSQWMAAMHEEIEALHRNKTWELVDLPKGRKAIGCKWVYKIKRD 819

Query: 792  ITKNSQPRYKARLVAKGFTQREGIDYSEIFSPVVKQTSIRLLLSLVAQNNLELDQLDVKT 851
               +   RY+ARLV KG+ Q+EGID++EIFSPVV+ T+IR++L++ A  NL L+QLDVKT
Sbjct: 820  -GNDQVERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRVVLAMCAAFNLHLEQLDVKT 879

Query: 852  TFLHDYLEETIYMVQPKGYEVQGKEDLYYLLKKSIYGLKQSPRCWYRRFD---------- 911
             FLH  L+E IYM+QP+G++ QGKE+L   L KS+YGLKQ+PRCWY+RFD          
Sbjct: 880  AFLHGELQEEIYMLQPEGFKEQGKENLVCRLTKSLYGLKQAPRCWYKRFDSFIISLGYNR 939

Query: 912  ----------------------------------DFITSLGFQ-------KNLRESKKIL 971
                                              D I  L  Q       K+L  + KIL
Sbjct: 940  LSSDHCTYYNRFDDNDFIILLLYVDDMLVVGPNKDQIQELKAQLAREFDMKDLGPANKIL 999

Query: 972  GIDIIRDRDQSTLSINQTSYCEKVIRRFNLTNARPVTLPIAHHFKLSAVNSPSETDIEHK 1031
            G+ I RDR    + ++Q +Y  KV+RRFN+ + +P++ P+  ++KLS+  SPS      +
Sbjct: 1000 GMQIHRDRKNRRIWLSQKNYLLKVLRRFNMQDCKPISTPLPVNYKLSSSMSPSNE--AER 1059

Query: 1032 LQMKNVPYSQAVGSLMYLMISTRPDLSYSASLVSKYMANSGRRHWEATKWIIRYLIWSKN 1091
            ++M  VPY+ AVGSLMY MI TRPD++ +   VS++MA+ GR HW   K I+RY+  + +
Sbjct: 1060 MEMSRVPYASAVGSLMYAMICTRPDIAQAVGAVSRFMADPGREHWSIVKRILRYIKGTSD 1119

Query: 1092 ARLNYQRTTEIELELIGYVDSDFAGDSDKRRSLTGYVFLYGRNLISWKAILQSIVALSTT 1097
              L ++ +   E  + GYVDSDFAGD DKR+S TGYVF      +SW + LQ++VALSTT
Sbjct: 1120 VALCFEGS---EFFVRGYVDSDFAGDLDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTT 1179

[Close]

BLAST of CSPI03G25110 vs. NCBI nr
Match: gi|1012341833|gb|KYP53032.1| (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan])

HSP 1 Score: 666.4 bits (1718), Expect = 8.7e-188
Identity = 416/1184 (35.14%), Postives = 642/1184 (54.22%), Query Frame = 1


Query: 72   NAYGTLILNLSDN----------IIRQVLEEETAYKVWMKLESLYASKDLPNKMYLREKN 131
            ++Y  LI+N+++N          +   +LEEE+  K   K + L +SK       +R ++
Sbjct: 149  DSYDQLIINITNNNVVGRLSFEDVAGAILEEESRRK--NKEDRLESSKQAEALTMMRGRS 208

Query: 132  FTYRMDPSKTLSENLDEFKKIVSDFKTLEDKLSDENEALKNQEKEKDSKGKQPEVSIVES 191
                   S+    +    +K +  +              K+   +K   GK  E S  + 
Sbjct: 209  MERGSSGSQNHGRSKSRGRKNLKCYNC-----GMRGHMKKDCWHKKSGGGKNSEASTSQG 268

Query: 192  ---------SFTYTDALASTLDQANHVNPLGKHDWVLDSGCTYHMTPFRAWFNTYREISG 251
                        Y++A++S  ++  H        W+LDSG T+HMTP R WF TY  ISG
Sbjct: 269  CVASTQEDGEILYSEAISSRGEKQLH------ECWILDSGATWHMTPNRDWFCTYESISG 328

Query: 252  ESVFIGNNNECNIAGIGSVTMKLKDKTVKLLRNVRHVPHLKRNLISLRMLDSLGCEYKGK 311
             SVF+GN++   IAG+G++ +K+ D T++ ++ VRHV  LK+NL+S+  LD L C+   +
Sbjct: 329  GSVFMGNDHALEIAGVGTIKLKMYDGTIRTIQGVRHVKGLKKNLLSIGQLDDLKCKIHVE 388

Query: 312  CGVFQVFMGSKLVLVGEKV-NDLFIIKGVEMIEEANTVLSLNLIEVDI-WHKRLSHISQK 371
             G+ +V  G+ +V+  EK+ ++L+++ G  + E   +V +++  E  + WH+RL H+S++
Sbjct: 389  GGILKVVKGNLVVMKAEKITSNLYLLLGETLQEADASVAAISQEEATMMWHRRLGHMSER 448

Query: 372  GLEALSKQGILPQDICSKLSFCEHCVLGKTRKQNFTKAQHTTRGILDYIHLDLWGPASTP 431
            GL+ L+++ +L       L FCEHCV  K  +  F K    ++ ILD IH D+W      
Sbjct: 449  GLKILAERNLLSGLKMVTLPFCEHCVTSKQHRLQFAKVTTRSKHILDLIHSDVWESPEI- 508

Query: 432  SLSGSRY--------------------------------------------LRTDNGLEF 491
            S+ G++Y                                            LRTDNG E+
Sbjct: 509  SMGGAKYFVSFIDDYSRRLWVYPIKKKSDVFPVFKEFKAQVELDTGKRIKCLRTDNGGEY 568

Query: 492  CGELFNNFCRQSGITRHKTVTYTPQQNRVAERLNKTIMERVRCLLSDVILKEKFWAEAAA 551
                F  FC+Q GI R  TV +TPQQN VAER+N+T++ER R +L    L + FWAEA  
Sbjct: 569  IDGDFLAFCKQEGIKRQFTVAHTPQQNGVAERMNRTLLERTRAMLRTAGLAKSFWAEAVK 628

Query: 552  YVMHTLNRSPHTSL--------------------VFGC---VGYAHQNKGKLKVRAAKCM 611
               + +NRSP T++                    VFGC   V Y  Q + KL  ++ KC+
Sbjct: 629  TACYLINRSPSTAIGLKTPMEMWSGKPSNYSSLHVFGCPVYVMYNSQERTKLDPKSRKCI 688

Query: 612  FIGFTEGVKGFKLWHPTNKRFIISKSSTEGNFDDTQSYTTQIEVENTGKSVQPTEEPTAI 671
            F+G+ + VKG++LW PT ++ ++S+      F +T+    Q E EN   +++ T      
Sbjct: 689  FLGYADNVKGYRLWDPTARKVVVSRDVV---FAETE---LQKEQENDS-TIKDTSIVEIG 748

Query: 672  EQEQVENLSEEQDEMLEEQPDLSQYSLARD--RQRRIIVPPARYAESNYISFVLNATVVP 731
             + + ++ SE + E  E++PD +     +   R+RR     + Y  +++ ++ L    + 
Sbjct: 749  GKSKKDDTSEAEQEHEEQEPDEANDEEVQQIRRERRRPSWHSDYVMASHDAYCL----LT 808

Query: 732  NDSEPSSFDEAVNSSNARQWIEAMNEEINSLNVNDTWTLASLPKGCKPIASKWIFKLKEG 791
             + EPS+F EA+ SS+  QW+ AM+EEI +L+ N TW L  LPKG K I  KW++K+K  
Sbjct: 809  EEGEPSTFQEALRSSDVSQWMAAMHEEIEALHRNKTWELVDLPKGRKAIGCKWVYKIKRD 868

Query: 792  ITKNSQPRYKARLVAKGFTQREGIDYSEIFSPVVKQTSIRLLLSLVAQNNLELDQLDVKT 851
               +   RY+ARLV KG+ Q+ GID++EIFSPVV+ T+IR++L++ A  NL L+QLDVKT
Sbjct: 869  -GNDQVERYRARLVVKGYAQKAGIDFNEIFSPVVRLTTIRVVLAMCAAFNLHLEQLDVKT 928

Query: 852  TFLHDYLEETIYMVQPKGYEVQGKEDLYYLLKKSIYGLKQSPRCWYRRFD---------- 911
             FLH  L+E IYM+QP+G++ QGKE+L   L KS+YGLKQ+PRCWY+RFD          
Sbjct: 929  AFLHGELQEEIYMLQPEGFKEQGKENLVCRLTKSLYGLKQAPRCWYKRFDSFIISLGYNR 988

Query: 912  ----------------------------------DFITSLGFQ-------KNLRESKKIL 971
                                              D I  L  Q       K+L  + KIL
Sbjct: 989  LSSDHCTYYNRFDDNDFIILLLYVDDMLVVGPNKDQIQELKAQLAREFDMKDLGPANKIL 1048

Query: 972  GIDIIRDRDQSTLSINQTSYCEKVIRRFNLTNARPVTLPIAHHFKLSAVNSPSETDIEHK 1031
            G+ I RDR    + ++Q +Y  KV+RRFN+ + +P++ P+  ++KLS+  SPS      +
Sbjct: 1049 GMQIHRDRKNRRIWLSQKNYLLKVLRRFNMQDCKPISTPLPVNYKLSSSMSPSNE--AER 1108

Query: 1032 LQMKNVPYSQAVGSLMYLMISTRPDLSYSASLVSKYMANSGRRHWEATKWIIRYLIWSKN 1091
            ++M  VPY+ AVGSLMY MI TRPD++ +   VS++MA+ GR HW   K I+RY+  + +
Sbjct: 1109 MEMSRVPYASAVGSLMYAMICTRPDIAQAVGAVSRFMADPGREHWSIVKRILRYIKGTSD 1168

Query: 1092 ARLNYQRTTEIELELIGYVDSDFAGDSDKRRSLTGYVFLYGRNLISWKAILQSIVALSTT 1097
              L ++ +   E  + GYVDSDFAGD DKR+S TGYVF      +SW + LQ++VALSTT
Sbjct: 1169 VALCFEGS---EFVVRGYVDSDFAGDLDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTT 1228

The following BLAST results are available for this feature:

BLAST of CSPI03G25110 vs. Swiss-Prot


Match Name	E-value	Identity	Description
POLX_TOBAC	1.0e-135	39.07	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
COPIA_DROME	4.3e-70	33.21	Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3	[more]
M300_ARATH	7.5e-22	42.74	Uncharacterized mitochondrial protein AtMg00300 OS=Arabidopsis thaliana GN=AtMg0...	[more]
M810_ARATH	4.0e-15	29.95	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg0...	[more]
M820_ARATH	4.1e-12	43.75	Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana GN=AtMg0...	[more]

BLAST of CSPI03G25110 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A151RJN4_CAJCA	1.2e-188	35.30	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=...	[more]
A0A151TKT1_CAJCA	1.2e-188	35.30	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=...	[more]
A0A151R2G6_CAJCA	2.7e-188	35.22	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=...	[more]
A0A151R6U8_CAJCA	4.7e-188	35.22	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=...	[more]
A0A151SDY6_CAJCA	6.1e-188	35.14	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=...	[more]

BLAST of CSPI03G25110 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G23160.1	8.2e-35	42.27	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00300.1	4.2e-23	42.74	ATMG00300.1 Gag-Pol-related retrotransposon family protein	[more]
ATMG00810.1	2.2e-16	29.95	ATMG00810.1 DNA/RNA polymerases superfamily protein	[more]
ATMG00820.1	2.3e-13	43.75	ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
ATMG00710.1	8.0e-06	34.94	ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

BLAST of CSPI03G25110 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|1012331264\|gb\|KYP42748.1\|	1.8e-188	35.30	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]	[more]
gi\|1012356478\|gb\|KYP67664.1\|	1.8e-188	35.30	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]	[more]
gi\|1012324677\|gb\|KYP36645.1\|	3.9e-188	35.22	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]	[more]
gi\|1012326275\|gb\|KYP38095.1\|	6.7e-188	35.22	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]	[more]
gi\|1012341833\|gb\|KYP53032.1\|	8.7e-188	35.14	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001584	Integrase_cat-core
IPR012337	RNaseH-like_sf
IPR013103	RVT_2
IPR025724	GAG-pre-integrase_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0015074	DNA integration

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G25110.1	CSPI03G25110.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 415..466 score: 2.
IPR001584	Integrase, catalytic core	PROFILE	PS50994	INTEGRASE	coord: 418..514 score: 12
IPR012337	Ribonuclease H-like domain	GENE3D	G3DSA:3.30.420.10		coord: 417..500 score: 2.0
IPR012337	Ribonuclease H-like domain	unknown	SSF53098	Ribonuclease H-like	coord: 395..500 score: 1.39
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 675..824 score: 6.4
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 314..379 score: 5.6
None	No IPR available	unknown	Coil	Coil	coord: 581..601 score: -coord: 143..173 scor
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 30..601 score: 3.6E-302coord: 617..1019 score: 3.6E
None	No IPR available	PANTHER	PTHR11439:SF192	SUBFAMILY NOT NAMED	coord: 30..601 score: 3.6E-302coord: 617..1019 score: 3.6E
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 69..160 score: 5.5
None	No IPR available	unknown	SSF56672	DNA/RNA polymerases	coord: 676..850 score: 1.33E-9coord: 888..1054 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI03G25110	Cucurbita pepo (Zucchini)	cpecpiB556
CSPI03G25110	Bottle gourd (USVL1VR-Ls)	cpilsiB230
CSPI03G25110	Melon (DHL92) v3.6.1	cpimedB197
CSPI03G25110	Cucumber (Gy14) v2	cgybcpiB110
CSPI03G25110	Silver-seed gourd	carcpiB0228
CSPI03G25110	Wax gourd	cpiwgoB298
CSPI03G25110	Cucumber (Chinese Long) v3	cpicucB144
CSPI03G25110	Watermelon (97103) v2	cpiwmbB246
CSPI03G25110	Cucumber (Gy14) v1	cgycpiB451
CSPI03G25110	Cucurbita maxima (Rimu)	cmacpiB466
CSPI03G25110	Cucurbita moschata (Rifu)	cmocpiB454
CSPI03G25110	Cucumber (Chinese Long) v2	cpicuB120
CSPI03G25110	Melon (DHL92) v3.5.1	cpimeB206
CSPI03G25110	Watermelon (Charleston Gray)	cpiwcgB260
CSPI03G25110	Watermelon (97103) v1	cpiwmB229