CSPI03G24940 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G24940
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionMYB family protein
LocationChr3 : 22122043 .. 22122947 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGATCAGATGATGATGTGAAAAAAGGGCCGTGGACGGCCGAGGAAGACTCTGCGCTTTACACTTATGTTACTGTTAACGGCGAAGGGCATTGGAACTCTGTTGCTCGCTCTACAGGTAAAACCCATCATTATTATTGTTAAGTTAATCATTTTTAACTAATTAAGTCCTGTAAATAACAATCTAATTAATTAATTTGGGTCTTTATTTATTTTCTTAAGGGTTGAAGAGAACTGGGAAAAGCTGTAGATTAAGATGGCTGAATTATCTCCGCCCTAATCTCCGCCGGGGAAATATTACTCTTCAAGAACAGCTCCTTATTCTTCAACTTCATTCTCGTTGGGGTAACCGGTCAGTTGTCTTTTCTTTTCTCATTTTAATTTATTTTTTTTATTTTTTACTTTTTAATGGATCAAAAACTAATAAATAATTATACATACGAACTTTGATTCAGGTGGTCGAAAATAGCTGAATTTCTTCCGGGAAGGACCGACAATGAGATAAAGAACTATTGGAGAACAAGAGTTCAAAAACAAGCTAAACAACTCAACTGTGATGTTAACAGTCAGCGTTTTCGAGATGCAATGAGACTTGTTTGGATCCCTCGCCTAGTGGAGCGGATAGAGGCAGCCACTTCTGCCCAATCTCCGCCACTTCAACCGCCACCGCCACCGTCATTGTTGTTGCCACCATGCATTGCCACGGATACCTCAACGTCGACGTGGGAGCAAAAAAGTATCATCCCAGAAAATGTGTCAGGGTCATGTTCAGACACGTCAGATTTGAGGGGAGGGTGGTGGGAAGGAGACGGAGTTGACTCATCATTTGAGAGCTTGTGGACCGAAGAAAACATTTGTTTCTTACAACACATTTTTAGTTAAACCGAAAGAAAAATTGATTGTTA

mRNA sequence

ATGGGATCAGATGATGATGTGAAAAAAGGGCCGTGGACGGCCGAGGAAGACTCTGCGCTTTACACTTATGTTACTGTTAACGGCGAAGGGCATTGGAACTCTGTTGCTCGCTCTACAGGGTTGAAGAGAACTGGGAAAAGCTGTAGATTAAGATGGCTGAATTATCTCCGCCCTAATCTCCGCCGGGGAAATATTACTCTTCAAGAACAGCTCCTTATTCTTCAACTTCATTCTCGTTGGGGTAACCGGTGGTCGAAAATAGCTGAATTTCTTCCGGGAAGGACCGACAATGAGATAAAGAACTATTGGAGAACAAGAGTTCAAAAACAAGCTAAACAACTCAACTGTGATGTTAACAGTCAGCGTTTTCGAGATGCAATGAGACTTGTTTGGATCCCTCGCCTAGTGGAGCGGATAGAGGCAGCCACTTCTGCCCAATCTCCGCCACTTCAACCGCCACCGCCACCGTCATTGTTGTTGCCACCATGCATTGCCACGGATACCTCAACGTCGACGTGGGAGCAAAAAAGTATCATCCCAGAAAATGTGTCAGGGTCATGTTCAGACACGTCAGATTTGAGGGGAGGGTGGTGGGAAGGAGACGGAGTTGACTCATCATTTGAGAGCTTGTGGACCGAAGAAAACATTTGTTTCTTACAACACATTTTTAGTTAA

Coding sequence (CDS)

ATGGGATCAGATGATGATGTGAAAAAAGGGCCGTGGACGGCCGAGGAAGACTCTGCGCTTTACACTTATGTTACTGTTAACGGCGAAGGGCATTGGAACTCTGTTGCTCGCTCTACAGGGTTGAAGAGAACTGGGAAAAGCTGTAGATTAAGATGGCTGAATTATCTCCGCCCTAATCTCCGCCGGGGAAATATTACTCTTCAAGAACAGCTCCTTATTCTTCAACTTCATTCTCGTTGGGGTAACCGGTGGTCGAAAATAGCTGAATTTCTTCCGGGAAGGACCGACAATGAGATAAAGAACTATTGGAGAACAAGAGTTCAAAAACAAGCTAAACAACTCAACTGTGATGTTAACAGTCAGCGTTTTCGAGATGCAATGAGACTTGTTTGGATCCCTCGCCTAGTGGAGCGGATAGAGGCAGCCACTTCTGCCCAATCTCCGCCACTTCAACCGCCACCGCCACCGTCATTGTTGTTGCCACCATGCATTGCCACGGATACCTCAACGTCGACGTGGGAGCAAAAAAGTATCATCCCAGAAAATGTGTCAGGGTCATGTTCAGACACGTCAGATTTGAGGGGAGGGTGGTGGGAAGGAGACGGAGTTGACTCATCATTTGAGAGCTTGTGGACCGAAGAAAACATTTGTTTCTTACAACACATTTTTAGTTAA
Homology
[Close]
BLAST of CSPI03G24940 vs. Swiss-Prot
Match: MY108_ARATH (Transcription factor MYB108 OS=Arabidopsis thaliana GN=MYB108 PE=1 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 1.5e-62
Identity = 106/147 (72.11%), Postives = 130/147 (88.44%), Query Frame = 1 

Query: 1   MGSDDDVKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNL 60
           M  + D+K+GPWTAEED  L  Y+  NGEG WNS++R  GL+RTGKSCRLRWLNYLRP++
Sbjct: 13  MEDEMDLKRGPWTAEEDFKLMNYIATNGEGRWNSLSRCAGLQRTGKSCRLRWLNYLRPDV 72

Query: 61  RRGNITLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDVNS 120
           RRGNITL+EQLLIL+LHSRWGNRWSKIA++LPGRTDNEIKNYWRTRVQK AKQL CDVNS
Sbjct: 73  RRGNITLEEQLLILELHSRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNS 132

Query: 121 QRFRDAMRLVWIPRLVERIEAATSAQS 148
           Q+F+D M+ +W+PRLVERI++A+++ +
Sbjct: 133 QQFKDTMKYLWMPRLVERIQSASASSA 159

[Close]
BLAST of CSPI03G24940 vs. Swiss-Prot
Match: MYB05_ANTMA (Myb-related protein 305 OS=Antirrhinum majus GN=MYB305 PE=2 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.4e-44
Identity = 81/110 (73.64%), Postives = 96/110 (87.27%), Query Frame = 1 

Query: 4   DDDVKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRG 63
           D +V+KGPWT EED  L  Y+  +GEG WNS+ARS GLKRTGKSCRLRWLNYLRP++RRG
Sbjct: 10  DVEVRKGPWTMEEDLILINYIANHGEGVWNSLARSAGLKRTGKSCRLRWLNYLRPDVRRG 69

Query: 64  NITLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQ 114
           NIT +EQLLI++LH++WGNRWSKIA+ LPGRTDNEIKNYWRTR+QK  +Q
Sbjct: 70  NITPEEQLLIMELHAKWGNRWSKIAKTLPGRTDNEIKNYWRTRIQKHMEQ 119

[Close]
BLAST of CSPI03G24940 vs. Swiss-Prot
Match: MYB21_ARATH (Transcription factor MYB21 OS=Arabidopsis thaliana GN=MYB21 PE=1 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.2e-43
Identity = 78/118 (66.10%), Postives = 99/118 (83.90%), Query Frame = 1 

Query: 3   SDDDVKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRR 62
           ++ +V+KGPWT EED  L  Y+  +G+G WNS+A+S GLKRTGKSCRLRWLNYLRP++RR
Sbjct: 16  AEAEVRKGPWTMEEDLILINYIANHGDGVWNSLAKSAGLKRTGKSCRLRWLNYLRPDVRR 75

Query: 63  GNITLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDVNS 121
           GNIT +EQL+I++LH++WGNRWSKIA+ LPGRTDNEIKN+WRTR+QK  KQ +    S
Sbjct: 76  GNITPEEQLIIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQKYIKQSDVTTTS 133

[Close]
BLAST of CSPI03G24940 vs. Swiss-Prot
Match: MYB40_ANTMA (Myb-related protein 340 OS=Antirrhinum majus GN=MYB340 PE=2 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.7e-43
Identity = 80/111 (72.07%), Postives = 97/111 (87.39%), Query Frame = 1 

Query: 4   DDDVKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRG 63
           D +V+KGPWT EED  L  +++ +GEG WN++ARS GLKRTGKSCRLRWLNYLRP++RRG
Sbjct: 10  DVEVRKGPWTMEEDLILINFISNHGEGVWNTIARSAGLKRTGKSCRLRWLNYLRPDVRRG 69

Query: 64  NITLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYW-RTRVQKQAKQ 114
           NIT +EQLLI++LH++WGNRWSKIA+ LPGRTDNEIKNYW RTR+QK  KQ
Sbjct: 70  NITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNYWNRTRIQKHIKQ 120

[Close]
BLAST of CSPI03G24940 vs. Swiss-Prot
Match: MYB57_ARATH (Transcription factor MYB57 OS=Arabidopsis thaliana GN=MYB57 PE=2 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.3e-42
Identity = 81/124 (65.32%), Postives = 100/124 (80.65%), Query Frame = 1 

Query: 7   VKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRGNIT 66
           V+KGPWT EED  L+ Y+  +GEG WNSVA+++GLKRTGKSCRLRWLNYLRP++RRGNIT
Sbjct: 25  VRKGPWTMEEDFILFNYILNHGEGLWNSVAKASGLKRTGKSCRLRWLNYLRPDVRRGNIT 84

Query: 67  LQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAK---------QLNCD 122
            +EQLLI+QLH++ GNRWSKIA+ LPGRTDNEIKN+WRT++Q+  K         Q +C 
Sbjct: 85  EEEQLLIIQLHAKLGNRWSKIAKHLPGRTDNEIKNFWRTKIQRHMKVSSENMMNHQHHCS 144

[Close]
BLAST of CSPI03G24940 vs. TrEMBL
Match: A0A0A0L862_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G535090 PE=4 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 8.4e-129
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 1 

Query: 1   MGSDDDVKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNL 60
           MGSDDDVKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNL
Sbjct: 1   MGSDDDVKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNL 60

Query: 61  RRGNITLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDVNS 120
           RRGNITLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDVNS
Sbjct: 61  RRGNITLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDVNS 120

Query: 121 QRFRDAMRLVWIPRLVERIEAATSAQSPPLQPPPPPSLLLPPCIATDTSTSTWEQKSIIP 180
           QRFRDAMRLVWIPRLVERIEAATSAQSPPLQPPPPPSLLLPPCIATDTSTSTWEQKSIIP
Sbjct: 121 QRFRDAMRLVWIPRLVERIEAATSAQSPPLQPPPPPSLLLPPCIATDTSTSTWEQKSIIP 180

Query: 181 ENVSGSCSDTSDLRGGWWEGDGVDSSFESLWTEENICFLQHIFS 225
           ENVSGSCSDTSDLRGGWWEGDGVDSSFESLWTEENICFLQHIFS
Sbjct: 181 ENVSGSCSDTSDLRGGWWEGDGVDSSFESLWTEENICFLQHIFS 224

[Close]
BLAST of CSPI03G24940 vs. TrEMBL
Match: M5XUE4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015973mg PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 2.4e-67
Identity = 138/266 (51.88%), Postives = 165/266 (62.03%), Query Frame = 1 

Query: 4   DDDVKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRG 63
           D D++KGPWT EEDS L+ Y+ ++GEG WNS+AR  GLKRTGKSCRLRWLNYLRP++RRG
Sbjct: 35  DVDLRKGPWTVEEDSVLFDYINIHGEGRWNSLARHAGLKRTGKSCRLRWLNYLRPSVRRG 94

Query: 64  NITLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDVNSQRF 123
           NITLQEQLLILQLHSRWGNRWSKIAE+LPGRTDNEIKNYWRTRVQKQAKQL CDVNS++F
Sbjct: 95  NITLQEQLLILQLHSRWGNRWSKIAEYLPGRTDNEIKNYWRTRVQKQAKQLKCDVNSKQF 154

Query: 124 RDAMRLVWIPRLVERIEAATSAQSPPLQPPPPPSLLLPPCIATDTSTSTWEQKSIIPENV 183
           +DAMR VWIPRL+ERI+A         Q  P  S      + T + +  W   +++PE  
Sbjct: 155 QDAMRYVWIPRLIERIQALP-------QSLPGQSSTESTGLTTASESQNWIDSNLMPETS 214

Query: 184 SGSCSDTSDL---------------------------------------------RGGWW 225
             + S++SD                                              +  +W
Sbjct: 215 GSTSSESSDQLQVCSIPDPTTTDQFMNYPSTNQYGSDNGSGCYEYGTNSDFLGFEQSNYW 274

[Close]
BLAST of CSPI03G24940 vs. TrEMBL
Match: A7WMF5_HUMLU (Myb factor OS=Humulus lupulus GN=myb3 PE=2 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 2.7e-66
Identity = 127/190 (66.84%), Postives = 149/190 (78.42%), Query Frame = 1 

Query: 6   DVKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRGNI 65
           D++KGPWT EED+ L+ YV+++GEG WNS+AR  GLKRTGKSCRLRWLNYLRP++RRGNI
Sbjct: 30  DLRKGPWTVEEDNKLFNYVSIHGEGRWNSLARHAGLKRTGKSCRLRWLNYLRPSVRRGNI 89

Query: 66  TLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDVNSQRFRD 125
           TLQEQLLIL+LHSRWGNRWSKIA++LPGRTDNEIKNYWRTRVQKQAKQL CDVNS++F+D
Sbjct: 90  TLQEQLLILELHSRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKQAKQLKCDVNSKQFQD 149

Query: 126 AMRLVWIPRLVERIEAATSAQSPPLQPPPPPSLLLPPCIATDTSTSTWEQKSIIPE---N 185
           AMR VWIPRLVERI++     S  +QP               T  STW   S  P+   +
Sbjct: 150 AMRYVWIPRLVERIQSGRPDSSSAVQP-------------ISTGVSTWGSSSANPKPMPD 206

Query: 186 VSGSCSDTSD 193
           VSGS SDTS+
Sbjct: 210 VSGSSSDTSE 206

[Close]
BLAST of CSPI03G24940 vs. TrEMBL
Match: G7ICT9_MEDTR (MYB3 OS=Medicago truncatula GN=MTR_1g086530 PE=2 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 3.5e-66
Identity = 132/239 (55.23%), Postives = 166/239 (69.46%), Query Frame = 1 

Query: 7   VKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRGNIT 66
           +KKGPWT EED+ L  YV V+G+GHWNSVAR +GLKRTGKSCRLRWLNYLRPN+RRGNIT
Sbjct: 33  IKKGPWTEEEDTILMNYVAVHGDGHWNSVARCSGLKRTGKSCRLRWLNYLRPNVRRGNIT 92

Query: 67  LQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDVNSQRFRDA 126
           LQEQ+LIL LHSRWGNRWSKIAE LPGRTDNEIKNYWRTRV KQA+QL CDVNSQ+FRD 
Sbjct: 93  LQEQVLILDLHSRWGNRWSKIAEQLPGRTDNEIKNYWRTRVVKQARQLKCDVNSQQFRDT 152

Query: 127 MRLVWIPRLVERIEAA--------------TSAQSPPLQPPPPPSLLLPPCIATDTSTST 186
           +R VWIPRL+ERI+++              T+ ++         +   PP + ++ S+ +
Sbjct: 153 LRYVWIPRLIERIQSSGATADTNSYSHGQITTCKNTKAHSETCGANANPPMLQSEVSSYS 212

Query: 187 WEQKSIIPENVSGSCSDTSDLRGGWWEGDGVDSSFE-----------SLWTEENICFLQ 221
              +  +  NVS +  D ++L   W + + +DS+ +            LWT+ENICFLQ
Sbjct: 213 SGVEVQVESNVSYNLMDCAELGSTWQDWNCLDSNIQEFEQSNVFGDSELWTDENICFLQ 271

[Close]
BLAST of CSPI03G24940 vs. TrEMBL
Match: A0A0A0K5V3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G413890 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 4.6e-66
Identity = 130/193 (67.36%), Postives = 153/193 (79.27%), Query Frame = 1 

Query: 6   DVKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRGNI 65
           DV+KGPWTAEEDS L+ YV  +GEG WN+VAR TGLKRTGKSCRLRWLNYLRP++RRGNI
Sbjct: 20  DVRKGPWTAEEDSVLFNYVNCHGEGRWNAVARCTGLKRTGKSCRLRWLNYLRPSVRRGNI 79

Query: 66  TLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDVNSQRFRD 125
           TLQEQLLIL+LH RWGNRWSKIA++LPGRTDNEIKNYWRTRVQKQAKQLNCDVNS++FRD
Sbjct: 80  TLQEQLLILELHFRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKQAKQLNCDVNSKQFRD 139

Query: 126 AMRLVWIPRLVERIEAATSAQS---PPLQPPPPPSLLLPPCIATDTSTSTWEQKSIIP-E 185
           AMR VW+PRL+ERI+A+T + +     +QPP PP  L      +  S S+W    + P  
Sbjct: 140 AMRYVWMPRLLERIQASTDSTTTIVDVIQPPHPPLEL----TQSSPSGSSWVNPHVAPTT 199

Query: 186 NVSGSCSDTSDLR 195
           + S S SD   L+
Sbjct: 200 SSSDSISDQVQLQ 208

[Close]
BLAST of CSPI03G24940 vs. TAIR10
Match: AT3G06490.1 (AT3G06490.1 myb domain protein 108)

HSP 1 Score: 240.7 bits (613), Expect = 8.5e-64
Identity = 106/147 (72.11%), Postives = 130/147 (88.44%), Query Frame = 1 

Query: 1   MGSDDDVKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNL 60
           M  + D+K+GPWTAEED  L  Y+  NGEG WNS++R  GL+RTGKSCRLRWLNYLRP++
Sbjct: 13  MEDEMDLKRGPWTAEEDFKLMNYIATNGEGRWNSLSRCAGLQRTGKSCRLRWLNYLRPDV 72

Query: 61  RRGNITLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDVNS 120
           RRGNITL+EQLLIL+LHSRWGNRWSKIA++LPGRTDNEIKNYWRTRVQK AKQL CDVNS
Sbjct: 73  RRGNITLEEQLLILELHSRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNS 132

Query: 121 QRFRDAMRLVWIPRLVERIEAATSAQS 148
           Q+F+D M+ +W+PRLVERI++A+++ +
Sbjct: 133 QQFKDTMKYLWMPRLVERIQSASASSA 159

[Close]
BLAST of CSPI03G24940 vs. TAIR10
Match: AT2G47190.1 (AT2G47190.1 myb domain protein 2)

HSP 1 Score: 236.1 bits (601), Expect = 2.1e-62
Identity = 129/250 (51.60%), Postives = 164/250 (65.60%), Query Frame = 1 

Query: 4   DDDVKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRG 63
           D DV+KGPWT EED+ L  +V+++G+  WN +ARS+GLKRTGKSCRLRWLNYLRP++RRG
Sbjct: 17  DSDVRKGPWTEEEDAILVNFVSIHGDARWNHIARSSGLKRTGKSCRLRWLNYLRPDVRRG 76

Query: 64  NITLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDVNSQRF 123
           NITL+EQ +IL+LHS WGNRWSKIA++LPGRTDNEIKNYWRTRVQKQAK L CDVNS  F
Sbjct: 77  NITLEEQFMILKLHSLWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKQAKHLRCDVNSNLF 136

Query: 124 RDAMRLVWIPRLVERIEAAT---------SAQSPPLQPPPPPSLLLPPCIATDTSTSTWE 183
           ++ MR VW+PRLVERI A +         S  + P QP   PS + P  +     +    
Sbjct: 137 KETMRNVWMPRLVERINAQSLPTTCEQVESMITDPSQPVNEPSPVEPGFV---QFSQNHH 196

Query: 184 QKSIIPENVSGSCSDT-----SDLRGGWWEGDGVDSS---------------FESLWT-E 224
           Q+ +    +S + S++     SD+RGG   G G D S                +++WT E
Sbjct: 197 QQFVPATELSATSSNSPAETFSDVRGGVVNGSGYDPSGQTGFGEFNDWGCVGGDNMWTDE 256

[Close]
BLAST of CSPI03G24940 vs. TAIR10
Match: AT5G49620.2 (AT5G49620.2 myb domain protein 78)

HSP 1 Score: 224.2 bits (570), Expect = 8.2e-59
Identity = 104/152 (68.42%), Postives = 123/152 (80.92%), Query Frame = 1 

Query: 6   DVKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRGNI 65
           DV++GPWT EED  L  Y+  +GEG WNS+AR   LKRTGKSCRLRWLNYLRP++RRGNI
Sbjct: 25  DVRRGPWTVEEDLELINYIASHGEGRWNSLARCAELKRTGKSCRLRWLNYLRPDVRRGNI 84

Query: 66  TLQEQLLILQLHSRWGN--------------RWSKIAEFLPGRTDNEIKNYWRTRVQKQA 125
           TL+EQLLIL+LH+RWGN              RWSKIA++LPGRTDNEIKNYWRTRVQK A
Sbjct: 85  TLEEQLLILELHTRWGNSNEFDHKFSSSCEDRWSKIAQYLPGRTDNEIKNYWRTRVQKHA 144

Query: 126 KQLNCDVNSQRFRDAMRLVWIPRLVERIEAAT 144
           KQL CDVNSQ+F+D M+ +W+PRLVERI+AA+
Sbjct: 145 KQLKCDVNSQQFKDTMKYLWMPRLVERIQAAS 176

[Close]
BLAST of CSPI03G24940 vs. TAIR10
Match: AT1G48000.1 (AT1G48000.1 myb domain protein 112)

HSP 1 Score: 223.0 bits (567), Expect = 1.8e-58
Identity = 114/209 (54.55%), Postives = 148/209 (70.81%), Query Frame = 1 

Query: 6   DVKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRGNI 65
           ++++GPWT EED  L +Y++++GEG WNS++RS GL RTGKSCRLRWLNYLRP++RRG+I
Sbjct: 31  EIRRGPWTVEEDMKLVSYISLHGEGRWNSLSRSAGLNRTGKSCRLRWLNYLRPDIRRGDI 90

Query: 66  TLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDVNSQRFRD 125
           +LQEQ +IL+LHSRWGNRWSKIA+ LPGRTDNEIKNYWRTRVQK AK L CDVNS++F+D
Sbjct: 91  SLQEQFIILELHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKHAKLLKCDVNSKQFKD 150

Query: 126 AMRLVWIPRLVERIEAATSAQSPPLQPPPPPSLLLPPCIATDTSTSTWEQKSIIPENVSG 185
            ++ +W+PRL+ERI A  S Q       P  S      +AT TS ST   +++      G
Sbjct: 151 TIKHLWMPRLIERIAATQSVQFTSNHYSPENS-----SVATATS-STSSSEAVRSSFYGG 210

Query: 186 SCSDTSDL----RGGWWEGDGVDSSFESL 211
              +   L     GG+W   G   +FE+L
Sbjct: 211 DQVEFGTLDHMTNGGYWFNGG--DTFETL 231

[Close]
BLAST of CSPI03G24940 vs. TAIR10
Match: AT1G68320.1 (AT1G68320.1 myb domain protein 62)

HSP 1 Score: 218.4 bits (555), Expect = 4.5e-57
Identity = 103/160 (64.38%), Postives = 129/160 (80.62%), Query Frame = 1 

Query: 4   DDDVKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRG 63
           D+++++GPWT EED+ L  Y+  NGEG WN VA+  GLKRTGKSCRLRWLNYL+P++RRG
Sbjct: 16  DEELRRGPWTLEEDTLLTNYILHNGEGRWNHVAKCAGLKRTGKSCRLRWLNYLKPDIRRG 75

Query: 64  NITLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDVNSQRF 123
           N+T QEQLLIL+LHS+WGNRWSKIA++LPGRTDNEIKNYWRTRVQKQA+QLN + NS +F
Sbjct: 76  NLTPQEQLLILELHSKWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKQARQLNIESNSDKF 135

Query: 124 RDAMRLVWIPRLVERIEAATSAQSPPLQPP--PPPSLLLP 162
            DA+R  W+PRL+E++E  +S  +    P      SLLLP
Sbjct: 136 FDAVRSFWVPRLIEKMEQNSSTTTTYCCPQNNNNNSLLLP 175

[Close]
BLAST of CSPI03G24940 vs. NCBI nr
Match: gi|778681523|ref|XP_011651532.1| (PREDICTED: transcription factor MYB108-like [Cucumis sativus])

HSP 1 Score: 467.6 bits (1202), Expect = 1.2e-128
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 1 

Query: 1   MGSDDDVKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNL 60
           MGSDDDVKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNL
Sbjct: 1   MGSDDDVKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNL 60

Query: 61  RRGNITLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDVNS 120
           RRGNITLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDVNS
Sbjct: 61  RRGNITLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDVNS 120

Query: 121 QRFRDAMRLVWIPRLVERIEAATSAQSPPLQPPPPPSLLLPPCIATDTSTSTWEQKSIIP 180
           QRFRDAMRLVWIPRLVERIEAATSAQSPPLQPPPPPSLLLPPCIATDTSTSTWEQKSIIP
Sbjct: 121 QRFRDAMRLVWIPRLVERIEAATSAQSPPLQPPPPPSLLLPPCIATDTSTSTWEQKSIIP 180

Query: 181 ENVSGSCSDTSDLRGGWWEGDGVDSSFESLWTEENICFLQHIFS 225
           ENVSGSCSDTSDLRGGWWEGDGVDSSFESLWTEENICFLQHIFS
Sbjct: 181 ENVSGSCSDTSDLRGGWWEGDGVDSSFESLWTEENICFLQHIFS 224

[Close]
BLAST of CSPI03G24940 vs. NCBI nr
Match: gi|659093280|ref|XP_008447462.1| (PREDICTED: transcription factor MYB108 [Cucumis melo])

HSP 1 Score: 417.5 bits (1072), Expect = 1.4e-113
Identity = 205/228 (89.91%), Postives = 211/228 (92.54%), Query Frame = 1 

Query: 1   MGSDDDVKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNL 60
           MGS+DDVKKGPWTAEEDS LYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNL
Sbjct: 1   MGSNDDVKKGPWTAEEDSLLYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNL 60

Query: 61  RRGNITLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDVNS 120
           RRGNITLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDVNS
Sbjct: 61  RRGNITLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDVNS 120

Query: 121 QRFRDAMRLVWIPRLVERIEAATSAQS---PPLQPPPPPSLLLPPCIATDTSTSTWEQKS 180
           QRFRDAMRLVWIPRLVERIEAATSAQS   PP  PPPPP  LL PCI TDTSTSTWE KS
Sbjct: 121 QRFRDAMRLVWIPRLVERIEAATSAQSPPPPPPPPPPPPPPLLAPCIDTDTSTSTWEHKS 180

Query: 181 II-PENVSGSCSDTSDLRGGWWEGDGVDSSFESLWTEENICFLQHIFS 225
           I+ P++VSGS SDTSDL GGWWEGDGV+SS E LWTEENICFLQHI +
Sbjct: 181 IVAPDHVSGSYSDTSDLTGGWWEGDGVESSLECLWTEENICFLQHILN 228

[Close]
BLAST of CSPI03G24940 vs. NCBI nr
Match: gi|596111347|ref|XP_007221521.1| (hypothetical protein PRUPE_ppa015973mg [Prunus persica])

HSP 1 Score: 263.5 bits (672), Expect = 3.5e-67
Identity = 138/266 (51.88%), Postives = 165/266 (62.03%), Query Frame = 1 

Query: 4   DDDVKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRG 63
           D D++KGPWT EEDS L+ Y+ ++GEG WNS+AR  GLKRTGKSCRLRWLNYLRP++RRG
Sbjct: 35  DVDLRKGPWTVEEDSVLFDYINIHGEGRWNSLARHAGLKRTGKSCRLRWLNYLRPSVRRG 94

Query: 64  NITLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDVNSQRF 123
           NITLQEQLLILQLHSRWGNRWSKIAE+LPGRTDNEIKNYWRTRVQKQAKQL CDVNS++F
Sbjct: 95  NITLQEQLLILQLHSRWGNRWSKIAEYLPGRTDNEIKNYWRTRVQKQAKQLKCDVNSKQF 154

Query: 124 RDAMRLVWIPRLVERIEAATSAQSPPLQPPPPPSLLLPPCIATDTSTSTWEQKSIIPENV 183
           +DAMR VWIPRL+ERI+A         Q  P  S      + T + +  W   +++PE  
Sbjct: 155 QDAMRYVWIPRLIERIQALP-------QSLPGQSSTESTGLTTASESQNWIDSNLMPETS 214

Query: 184 SGSCSDTSDL---------------------------------------------RGGWW 225
             + S++SD                                              +  +W
Sbjct: 215 GSTSSESSDQLQVCSIPDPTTTDQFMNYPSTNQYGSDNGSGCYEYGTNSDFLGFEQSNYW 274

[Close]
BLAST of CSPI03G24940 vs. NCBI nr
Match: gi|156713649|emb|CAM58451.1| (myb factor [Humulus lupulus])

HSP 1 Score: 260.0 bits (663), Expect = 3.8e-66
Identity = 127/190 (66.84%), Postives = 149/190 (78.42%), Query Frame = 1 

Query: 6   DVKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRGNI 65
           D++KGPWT EED+ L+ YV+++GEG WNS+AR  GLKRTGKSCRLRWLNYLRP++RRGNI
Sbjct: 30  DLRKGPWTVEEDNKLFNYVSIHGEGRWNSLARHAGLKRTGKSCRLRWLNYLRPSVRRGNI 89

Query: 66  TLQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDVNSQRFRD 125
           TLQEQLLIL+LHSRWGNRWSKIA++LPGRTDNEIKNYWRTRVQKQAKQL CDVNS++F+D
Sbjct: 90  TLQEQLLILELHSRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKQAKQLKCDVNSKQFQD 149

Query: 126 AMRLVWIPRLVERIEAATSAQSPPLQPPPPPSLLLPPCIATDTSTSTWEQKSIIPE---N 185
           AMR VWIPRLVERI++     S  +QP               T  STW   S  P+   +
Sbjct: 150 AMRYVWIPRLVERIQSGRPDSSSAVQP-------------ISTGVSTWGSSSANPKPMPD 206

Query: 186 VSGSCSDTSD 193
           VSGS SDTS+
Sbjct: 210 VSGSSSDTSE 206

[Close]
BLAST of CSPI03G24940 vs. NCBI nr
Match: gi|357442163|ref|XP_003591359.1| (myb transcription factor [Medicago truncatula])

HSP 1 Score: 259.6 bits (662), Expect = 5.0e-66
Identity = 132/239 (55.23%), Postives = 166/239 (69.46%), Query Frame = 1 

Query: 7   VKKGPWTAEEDSALYTYVTVNGEGHWNSVARSTGLKRTGKSCRLRWLNYLRPNLRRGNIT 66
           +KKGPWT EED+ L  YV V+G+GHWNSVAR +GLKRTGKSCRLRWLNYLRPN+RRGNIT
Sbjct: 33  IKKGPWTEEEDTILMNYVAVHGDGHWNSVARCSGLKRTGKSCRLRWLNYLRPNVRRGNIT 92

Query: 67  LQEQLLILQLHSRWGNRWSKIAEFLPGRTDNEIKNYWRTRVQKQAKQLNCDVNSQRFRDA 126
           LQEQ+LIL LHSRWGNRWSKIAE LPGRTDNEIKNYWRTRV KQA+QL CDVNSQ+FRD 
Sbjct: 93  LQEQVLILDLHSRWGNRWSKIAEQLPGRTDNEIKNYWRTRVVKQARQLKCDVNSQQFRDT 152

Query: 127 MRLVWIPRLVERIEAA--------------TSAQSPPLQPPPPPSLLLPPCIATDTSTST 186
           +R VWIPRL+ERI+++              T+ ++         +   PP + ++ S+ +
Sbjct: 153 LRYVWIPRLIERIQSSGATADTNSYSHGQITTCKNTKAHSETCGANANPPMLQSEVSSYS 212

Query: 187 WEQKSIIPENVSGSCSDTSDLRGGWWEGDGVDSSFE-----------SLWTEENICFLQ 221
              +  +  NVS +  D ++L   W + + +DS+ +            LWT+ENICFLQ
Sbjct: 213 SGVEVQVESNVSYNLMDCAELGSTWQDWNCLDSNIQEFEQSNVFGDSELWTDENICFLQ 271

The following BLAST results are available for this feature:
BLAST of CSPI03G24940 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MY108_ARATH1.5e-6272.11Transcription factor MYB108 OS=Arabidopsis thaliana GN=MYB108 PE=1 SV=1[more]
MYB05_ANTMA1.4e-4473.64Myb-related protein 305 OS=Antirrhinum majus GN=MYB305 PE=2 SV=1[more]
MYB21_ARATH1.2e-4366.10Transcription factor MYB21 OS=Arabidopsis thaliana GN=MYB21 PE=1 SV=1[more]
MYB40_ANTMA2.7e-4372.07Myb-related protein 340 OS=Antirrhinum majus GN=MYB340 PE=2 SV=1[more]
MYB57_ARATH1.3e-4265.32Transcription factor MYB57 OS=Arabidopsis thaliana GN=MYB57 PE=2 SV=1[more]
BLAST of CSPI03G24940 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L862_CUCSA8.4e-129100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G535090 PE=4 SV=1[more]
M5XUE4_PRUPE2.4e-6751.88Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015973mg PE=4 SV=1[more]
A7WMF5_HUMLU2.7e-6666.84Myb factor OS=Humulus lupulus GN=myb3 PE=2 SV=1[more]
G7ICT9_MEDTR3.5e-6655.23MYB3 OS=Medicago truncatula GN=MTR_1g086530 PE=2 SV=1[more]
A0A0A0K5V3_CUCSA4.6e-6667.36Uncharacterized protein OS=Cucumis sativus GN=Csa_7G413890 PE=4 SV=1[more]
BLAST of CSPI03G24940 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G06490.18.5e-6472.11 myb domain protein 108[more]
AT2G47190.12.1e-6251.60 myb domain protein 2[more]
AT5G49620.28.2e-5968.42 myb domain protein 78[more]
AT1G48000.11.8e-5854.55 myb domain protein 112[more]
AT1G68320.14.5e-5764.38 myb domain protein 62[more]
BLAST of CSPI03G24940 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778681523|ref|XP_011651532.1|1.2e-128100.00PREDICTED: transcription factor MYB108-like [Cucumis sativus][more]
gi|659093280|ref|XP_008447462.1|1.4e-11389.91PREDICTED: transcription factor MYB108 [Cucumis melo][more]
gi|596111347|ref|XP_007221521.1|3.5e-6751.88hypothetical protein PRUPE_ppa015973mg [Prunus persica][more]
gi|156713649|emb|CAM58451.1|3.8e-6666.84myb factor [Humulus lupulus][more]
gi|357442163|ref|XP_003591359.1|5.0e-6655.23myb transcription factor [Medicago truncatula][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR009057Homeobox-like_sf
IPR017930Myb_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0016036 cellular response to phosphate starvation
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0009737 response to abscisic acid
biological_process GO:0030154 cell differentiation
biological_process GO:0006357 regulation of transcription from RNA polymerase II promoter
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0005516 calmodulin binding
molecular_function GO:0001046 core promoter sequence-specific DNA binding
molecular_function GO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0001135 transcription factor activity, RNA polymerase II transcription factor recruiting
molecular_function GO:0044212 transcription regulatory region DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G24940.1CSPI03G24940.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 9..56
score: 9.1E-15coord: 62..105
score: 7.3
IPR001005SANT/Myb domainSMARTSM00717santcoord: 8..58
score: 9.3E-14coord: 61..109
score: 1.7
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 10..63
score: 4.6E-21coord: 64..110
score: 1.2
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 7..103
score: 1.35
IPR017930Myb domainPROFILEPS51294HTH_MYBcoord: 61..111
score: 18.207coord: 4..60
score: 24
NoneNo IPR availablePANTHERPTHR10641MYB-LIKE DNA-BINDING PROTEIN MYBcoord: 4..147
score: 1.9E
NoneNo IPR availablePANTHERPTHR10641:SF494TRANSCRIPTION FACTOR MYB108coord: 4..147
score: 1.9E