CSPI03G23040 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G23040
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr3 : 19787841 .. 19788173 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGGTGTGAAGAAGAAACGGCAATATTCAAGAAAAAACCAAGAATTTTCAGACTCCTTTCCCCACCGTGTGGTCGGCGAAGTCTTCCGCCGTCAAGTTCTGTCCAACCTCCGTCATTCTCCGCGGTACAACAACGACCTCCTCTCCGTTACCGTTAATTCTCGTCAAAACAATAAAACCCCTCTCCCCTTCATCTCCATTTTTTCAAACATCAACCCCAGCTTTCCCATTTTCTTCACGAAACAAATCTTCTTCCATTCATTCTTCACCCAGAAACCCATTTCCGGAATCACTTCCCCTTCCCCATTTTCCGCCCCTAATTTCAGGTGA

mRNA sequence

ATGAAAGGTGTGAAGAAGAAACGGCAATATTCAAGAAAAAACCAAGAATTTTCAGACTCCTTTCCCCACCGTGTGGTCGGCGAAGTCTTCCGCCGTCAAGTTCTGTCCAACCTCCGTCATTCTCCGCGGTACAACAACGACCTCCTCTCCGTTACCGTTAATTCTCGTCAAAACAATAAAACCCCTCTCCCCTTCATCTCCATTTTTTCAAACATCAACCCCAGCTTTCCCATTTTCTTCACGAAACAAATCTTCTTCCATTCATTCTTCACCCAGAAACCCATTTCCGGAATCACTTCCCCTTCCCCATTTTCCGCCCCTAATTTCAGGTGA

Coding sequence (CDS)

ATGAAAGGTGTGAAGAAGAAACGGCAATATTCAAGAAAAAACCAAGAATTTTCAGACTCCTTTCCCCACCGTGTGGTCGGCGAAGTCTTCCGCCGTCAAGTTCTGTCCAACCTCCGTCATTCTCCGCGGTACAACAACGACCTCCTCTCCGTTACCGTTAATTCTCGTCAAAACAATAAAACCCCTCTCCCCTTCATCTCCATTTTTTCAAACATCAACCCCAGCTTTCCCATTTTCTTCACGAAACAAATCTTCTTCCATTCATTCTTCACCCAGAAACCCATTTCCGGAATCACTTCCCCTTCCCCATTTTCCGCCCCTAATTTCAGGTGA
Homology
[Close]
BLAST of CSPI03G23040 vs. TrEMBL
Match: A0A0A0LBC3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G405520 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 6.8e-55
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 1 

Query: 1   MKGVKKKRQYSRKNQEFSDSFPHRVVGEVFRRQVLSNLRHSPRYNNDLLSVTVNSRQNNK 60
           MKGVKKKRQYSRKNQEFSDSFPHRVVGEVFRRQVLSNLRHSPRYNNDLLSVTVNSRQNNK
Sbjct: 1   MKGVKKKRQYSRKNQEFSDSFPHRVVGEVFRRQVLSNLRHSPRYNNDLLSVTVNSRQNNK 60

Query: 61  TPLPFISIFSNINPSFPIFFTKQIFFHSFFTQKPISGITSPSPFSAPNFR 111
           TPLPFISIFSNINPSFPIFFTKQIFFHSFFTQKPISGITSPSPFSAPNFR
Sbjct: 61  TPLPFISIFSNINPSFPIFFTKQIFFHSFFTQKPISGITSPSPFSAPNFR 110

[Close]
BLAST of CSPI03G23040 vs. NCBI nr
Match: gi|700202819|gb|KGN57952.1| (hypothetical protein Csa_3G405520 [Cucumis sativus])

HSP 1 Score: 221.1 bits (562), Expect = 9.7e-55
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 1 

Query: 1   MKGVKKKRQYSRKNQEFSDSFPHRVVGEVFRRQVLSNLRHSPRYNNDLLSVTVNSRQNNK 60
           MKGVKKKRQYSRKNQEFSDSFPHRVVGEVFRRQVLSNLRHSPRYNNDLLSVTVNSRQNNK
Sbjct: 1   MKGVKKKRQYSRKNQEFSDSFPHRVVGEVFRRQVLSNLRHSPRYNNDLLSVTVNSRQNNK 60

Query: 61  TPLPFISIFSNINPSFPIFFTKQIFFHSFFTQKPISGITSPSPFSAPNFR 111
           TPLPFISIFSNINPSFPIFFTKQIFFHSFFTQKPISGITSPSPFSAPNFR
Sbjct: 61  TPLPFISIFSNINPSFPIFFTKQIFFHSFFTQKPISGITSPSPFSAPNFR 110

The following BLAST results are available for this feature:
BLAST of CSPI03G23040 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI03G23040 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LBC3_CUCSA6.8e-55100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G405520 PE=4 SV=1[more]
BLAST of CSPI03G23040 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI03G23040 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700202819|gb|KGN57952.1|9.7e-55100.00hypothetical protein Csa_3G405520 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G23040.1CSPI03G23040.1mRNA