CSPI03G22210 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G22210
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionTransposase-like protein
LocationChr3 : 18643668 .. 18644159 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAAGTCATGGATGACCCAAAATAGGATGTCAAGAGAATATGATTTAGGAGTCGAAAGGTTCATTAAATTTGGGTTGAGTCATGTCAAAGGTTCTAATTCAATTAGATGTCCATGTTTGAATTGCGGCAATCGTTTACTTAAGGATGTCTCAACAGTTCGGTATCATTTGTGTGCCAATGGAATTGTTAAGAGTTACAAGGTATGGTTCTGGCATGGTGAAGAACTGAACTCAGATAATGTTACCAACACGATGGAAAATACAGTGGGTGAAACTGATGAAAACGACGATTTATTTAATACGGTTCAATCTATTCAAGAACAATCTTGTAATGCATCAAATACCTTCGACACTATGTTTGATGACGCGAAGAAACCCTTATACCCAGGATGTAAGAAATTCACAAAGTTATCAACCCTCGTGAGATTGTATAACCTGAAGGTTAGGTATGGTTGGACTAATACTGTTGGATCGGTATGGCAACCCTAG

mRNA sequence

ATGGACAAGTCATGGATGACCCAAAATAGGATGTCAAGAGAATATGATTTAGGAGTCGAAAGGTTCATTAAATTTGGGTTGAGTCATGTCAAAGGTTCTAATTCAATTAGATGTCCATGTTTGAATTGCGGCAATCGTTTACTTAAGGATGTCTCAACAGTTCGGTATCATTTGTGTGCCAATGGAATTGTTAAGAGTTACAAGGTATGGTTCTGGCATGGTGAAGAACTGAACTCAGATAATGTTACCAACACGATGGAAAATACAGTGGGTGAAACTGATGAAAACGACGATTTATTTAATACGGTTCAATCTATTCAAGAACAATCTTGTAATGCATCAAATACCTTCGACACTATGTTTGATGACGCGAAGAAACCCTTATACCCAGGATGTAAGAAATTCACAAAGTTATCAACCCTCGTGAGATTGTATAACCTGAAGGTTAGGTATGGTTGGACTAATACTGTTGGATCGGTATGGCAACCCTAG

Coding sequence (CDS)

ATGGACAAGTCATGGATGACCCAAAATAGGATGTCAAGAGAATATGATTTAGGAGTCGAAAGGTTCATTAAATTTGGGTTGAGTCATGTCAAAGGTTCTAATTCAATTAGATGTCCATGTTTGAATTGCGGCAATCGTTTACTTAAGGATGTCTCAACAGTTCGGTATCATTTGTGTGCCAATGGAATTGTTAAGAGTTACAAGGTATGGTTCTGGCATGGTGAAGAACTGAACTCAGATAATGTTACCAACACGATGGAAAATACAGTGGGTGAAACTGATGAAAACGACGATTTATTTAATACGGTTCAATCTATTCAAGAACAATCTTGTAATGCATCAAATACCTTCGACACTATGTTTGATGACGCGAAGAAACCCTTATACCCAGGATGTAAGAAATTCACAAAGTTATCAACCCTCGTGAGATTGTATAACCTGAAGGTTAGGTATGGTTGGACTAATACTGTTGGATCGGTATGGCAACCCTAG
Homology
[Close]
BLAST of CSPI03G22210 vs. TrEMBL
Match: A5BJV7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011055 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.2e-34
Identity = 72/156 (46.15%), Postives = 98/156 (62.82%), Query Frame = 1 

Query: 2   DKSWMTQNRMSREYDLGVERFIKFGLSHVKGSNSIRCPCLNCGNRLLKDVSTVRYHLCAN 61
           ++ WM+++R S EYD GVE FI F L+H     SI+CPCL CGN L +    +R HL  N
Sbjct: 3   NRDWMSKDRRSVEYDEGVENFINFALAHSTNHTSIKCPCLRCGNMLCQTPQVIREHLFFN 62

Query: 62  GIVKSYKVWFWHGEELNSDNVTNTMENTVGETDEND--DLFNTVQSIQEQSCNASNTFDT 121
           GI  +Y+VW+WHGE+  S   +N  +    + + ND  D  + V + Q    N    F  
Sbjct: 63  GIDLNYRVWYWHGEKGPSGAFSNVPQQRYDKCEYNDVADTIDMVNAAQVNCMNDPQVFGR 122

Query: 122 MFDDAKKPLYPGCKKFTKLSTLVRLYNLKVRYGWTN 156
           + +DA+KPLYPGC K+TKLS LV+LYNLK RYGW++
Sbjct: 123 LLEDAEKPLYPGCMKYTKLSALVKLYNLKARYGWSD 158

[Close]
BLAST of CSPI03G22210 vs. TrEMBL
Match: A5ALA6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030061 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.0e-34
Identity = 72/156 (46.15%), Postives = 97/156 (62.18%), Query Frame = 1 

Query: 2   DKSWMTQNRMSREYDLGVERFIKFGLSHVKGSNSIRCPCLNCGNRLLKDVSTVRYHLCAN 61
           ++ WM+++R   EYD GVE+FI F L+H     SI+CPCL CGN L +    +R HL  N
Sbjct: 3   NRDWMSKDRRLVEYDEGVEKFINFALAHSTNHTSIKCPCLRCGNLLCQTPQVIREHLFFN 62

Query: 62  GIVKSYKVWFWHGEELNSDNVTNTMENTVGETDEND--DLFNTVQSIQEQSCNASNTFDT 121
           GI  SY+VW+WHGE+  S   +N  +    +   ND  D  + V + Q    N    F  
Sbjct: 63  GIDLSYRVWYWHGEKGPSGGFSNVSQQRYDKCKYNDVADTIDMVNAAQVNCMNDPQVFGR 122

Query: 122 MFDDAKKPLYPGCKKFTKLSTLVRLYNLKVRYGWTN 156
           + +DA+KPLYPGC K+TKLS LV+LYNLK RYGW++
Sbjct: 123 LLEDAEKPLYPGCMKYTKLSALVKLYNLKARYGWSD 158

[Close]
BLAST of CSPI03G22210 vs. TrEMBL
Match: A5CB63_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040314 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 9.8e-34
Identity = 71/156 (45.51%), Postives = 96/156 (61.54%), Query Frame = 1 

Query: 2   DKSWMTQNRMSREYDLGVERFIKFGLSHVKGSNSIRCPCLNCGNRLLKDVSTVRYHLCAN 61
           ++ WM+++R S EYD GVE FI F L+H     SI+C CL CGN L +    +R HL  N
Sbjct: 3   NRDWMSKDRRSVEYDEGVENFINFALAHSTNHTSIKCXCLRCGNLLCQTPQVIREHLFFN 62

Query: 62  GIVKSYKVWFWHGEELNSDNVTNTMENTVGETDEND--DLFNTVQSIQEQSCNASNTFDT 121
           GI  SY+VW+WHGE+  S   +N  +    + + ND  D  + V + Q    N    F  
Sbjct: 63  GIDXSYRVWYWHGEKGPSGGFSNVSQQRYDKCEYNDVADTIDMVNAAQVNCMNDPQVFGR 122

Query: 122 MFDDAKKPLYPGCKKFTKLSTLVRLYNLKVRYGWTN 156
           + +DA+KPLYPGC K+TKLS LV+LYNLK  YGW++
Sbjct: 123 LLEDAEKPLYPGCMKYTKLSALVKLYNLKAXYGWSD 158

[Close]
BLAST of CSPI03G22210 vs. TrEMBL
Match: A5C4T9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043919 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 3.7e-33
Identity = 70/156 (44.87%), Postives = 96/156 (61.54%), Query Frame = 1 

Query: 2   DKSWMTQNRMSREYDLGVERFIKFGLSHVKGSNSIRCPCLNCGNRLLKDVSTVRYHLCAN 61
           ++ WM+++R   EYD GVE FI F L+H     SI+CPCL CGN L +    +R HL  N
Sbjct: 3   NRDWMSKDRRXVEYDEGVENFINFXLTHSTNHTSIKCPCLRCGNLLCQIPQVIREHLFFN 62

Query: 62  GIVKSYKVWFWHGEELNSDNVTNTMENTVGETDEND--DLFNTVQSIQEQSCNASNTFDT 121
           GI  SY++W+WHGE+  S   +N  +    + + ND  D  + V + Q    N    F  
Sbjct: 63  GIDLSYRIWYWHGEKGPSGGFSNVSQQRYDKCEYNDVVDTIDMVNAAQVNCMNDPQVFGR 122

Query: 122 MFDDAKKPLYPGCKKFTKLSTLVRLYNLKVRYGWTN 156
           +  DA+KPLYPGC K+TKLS LV+LYNLK R+GW++
Sbjct: 123 LLADAEKPLYPGCMKYTKLSALVKLYNLKARHGWSD 158

[Close]
BLAST of CSPI03G22210 vs. TrEMBL
Match: A5AGM6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042967 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 8.3e-33
Identity = 71/156 (45.51%), Postives = 96/156 (61.54%), Query Frame = 1 

Query: 2   DKSWMTQNRMSREYDLGVERFIKFGLSHVKGSNSIRCPCLNCGNRLLKDVSTVRYHLCAN 61
           ++ WM+++R S EYD GVE FI F L+H     SI+CPCL CGN L +    +R HL  N
Sbjct: 3   NQDWMSKDRRSIEYDEGVENFINFALAHSTNHTSIKCPCLRCGNLLCQAPQVIREHLFFN 62

Query: 62  GIVKSYKVWFWHGEELNSDNVTNTMENTVGETDEND--DLFNTVQSIQEQSCNASNTFDT 121
           GI  SY+VW+WHGE+  S   +N  +    + + ND  D  + V  +Q    N    F  
Sbjct: 63  GIDLSYQVWYWHGEKGPSGGFSNVSQQRYDKCEYNDVTDTIDMVNVVQVNCMNDPQVFGK 122

Query: 122 MFDDAKKPLYPGCKKFTKLSTLVRLYNLKVRYGWTN 156
           + +DA+K LY GC K+TKLS LV+LYNLK RYGW++
Sbjct: 123 LLEDAEKNLYLGCMKYTKLSALVKLYNLKARYGWSD 158

[Close]
BLAST of CSPI03G22210 vs. NCBI nr
Match: gi|659072230|ref|XP_008464173.1| (PREDICTED: uncharacterized protein LOC103502117 [Cucumis melo])

HSP 1 Score: 213.8 bits (543), Expect = 2.3e-52
Identity = 102/157 (64.97%), Postives = 121/157 (77.07%), Query Frame = 1 

Query: 1   MDKSWMTQNRMSREYDLGVERFIKFGLSHVKGSNSIRCPCLNCGNRLLKDVSTVRYHLCA 60
           MDKSWM +NRMSREY+LGVE FI+FG  + KGS++IRCPCL CGNRL +D STVRYHL A
Sbjct: 1   MDKSWMMENRMSREYELGVEAFIQFGFRNAKGSSTIRCPCLKCGNRLPQDESTVRYHLYA 60

Query: 61  NGIVKSYKVWFWHGEELNSDNVTNTMENTVGETDENDDLF---NTVQSIQEQSCNASNTF 120
           NGI +SYK+WFWHGE   S+   N    T  ET  +DDLF   N VQ++++Q     NTF
Sbjct: 61  NGIDQSYKIWFWHGESFTSETSCNRQAYTNEET-VDDDLFHVINMVQNVRDQFSEVPNTF 120

Query: 121 DTMFDDAKKPLYPGCKKFTKLSTLVRLYNLKVRYGWT 155
           D MFDDAKKPL+PGCK+FTKL  LVRLYNLKVR+GW+
Sbjct: 121 DNMFDDAKKPLFPGCKRFTKLLALVRLYNLKVRFGWS 156

[Close]
BLAST of CSPI03G22210 vs. NCBI nr
Match: gi|778688593|ref|XP_004142581.2| (PREDICTED: uncharacterized protein LOC101205266 [Cucumis sativus])

HSP 1 Score: 159.5 bits (402), Expect = 5.1e-36
Identity = 81/159 (50.94%), Postives = 106/159 (66.67%), Query Frame = 1 

Query: 1   MDKSWMTQNRMSREYDLGVERFIKFGLSHVKGSNSIRCPCLNCGNRLLKDVSTVRYHLCA 60
           MDKSWM ++R+S++Y+LGVE FIKFG S+   S+ IRCPCL CGN        VR HL  
Sbjct: 1   MDKSWMHKSRLSKDYELGVENFIKFGFSNTT-SSYIRCPCLKCGNCEKHSRKGVRDHLYV 60

Query: 61  NGIVKSYKVWFWHGEELNSDNVTNTMENTVGETDENDDLFNTVQSIQ---EQSCNASNTF 120
           NGI +SYK WFWHGEEL + +  +        T E+ D+ +  + I+   E+       F
Sbjct: 61  NGIDESYKFWFWHGEELPNSSFYDESSKFDTHTCEDQDVGSVKEMIEVAHEEYSKDPTGF 120

Query: 121 DTMFDDAKKPLYPGCKKFTKLSTLVRLYNLKVRYGWTNT 157
           + +  DA+KPLY GCKK+TKLSTLV+LYNLKVRYGW++T
Sbjct: 121 EKLLIDAEKPLYEGCKKYTKLSTLVKLYNLKVRYGWSDT 158

[Close]
BLAST of CSPI03G22210 vs. NCBI nr
Match: gi|778688696|ref|XP_011652815.1| (PREDICTED: uncharacterized protein LOC105435113 [Cucumis sativus])

HSP 1 Score: 158.3 bits (399), Expect = 1.1e-35
Identity = 81/159 (50.94%), Postives = 105/159 (66.04%), Query Frame = 1 

Query: 1   MDKSWMTQNRMSREYDLGVERFIKFGLSHVKGSNSIRCPCLNCGNRLLKDVSTVRYHLCA 60
           MDKSWM ++R+S++Y+LGVE FIKFG S+   S+ IRCPCL CGN        VR HL  
Sbjct: 1   MDKSWMHKSRLSKDYELGVENFIKFGFSNTT-SSYIRCPCLKCGNCEKHSRKGVRDHLYV 60

Query: 61  NGIVKSYKVWFWHGEELNSDNVTNTMENTVGETDENDDLFNTVQSIQ---EQSCNASNTF 120
           NGI +SYK WFWHGEEL + +  +        T E+ D+ +  + I+   E+       F
Sbjct: 61  NGIDESYKFWFWHGEELPNSSFYDESSKFDTHTCEDQDVGSVKEMIEVAHEEYSKDPTGF 120

Query: 121 DTMFDDAKKPLYPGCKKFTKLSTLVRLYNLKVRYGWTNT 157
           + +  DA KPLY GCKK+TKLSTLV+LYNLKVRYGW++T
Sbjct: 121 EKLLIDAGKPLYEGCKKYTKLSTLVKLYNLKVRYGWSDT 158

[Close]
BLAST of CSPI03G22210 vs. NCBI nr
Match: gi|147779778|emb|CAN72425.1| (hypothetical protein VITISV_011055 [Vitis vinifera])

HSP 1 Score: 154.5 bits (389), Expect = 1.7e-34
Identity = 72/156 (46.15%), Postives = 98/156 (62.82%), Query Frame = 1 

Query: 2   DKSWMTQNRMSREYDLGVERFIKFGLSHVKGSNSIRCPCLNCGNRLLKDVSTVRYHLCAN 61
           ++ WM+++R S EYD GVE FI F L+H     SI+CPCL CGN L +    +R HL  N
Sbjct: 3   NRDWMSKDRRSVEYDEGVENFINFALAHSTNHTSIKCPCLRCGNMLCQTPQVIREHLFFN 62

Query: 62  GIVKSYKVWFWHGEELNSDNVTNTMENTVGETDEND--DLFNTVQSIQEQSCNASNTFDT 121
           GI  +Y+VW+WHGE+  S   +N  +    + + ND  D  + V + Q    N    F  
Sbjct: 63  GIDLNYRVWYWHGEKGPSGAFSNVPQQRYDKCEYNDVADTIDMVNAAQVNCMNDPQVFGR 122

Query: 122 MFDDAKKPLYPGCKKFTKLSTLVRLYNLKVRYGWTN 156
           + +DA+KPLYPGC K+TKLS LV+LYNLK RYGW++
Sbjct: 123 LLEDAEKPLYPGCMKYTKLSALVKLYNLKARYGWSD 158

[Close]
BLAST of CSPI03G22210 vs. NCBI nr
Match: gi|147853389|emb|CAN80205.1| (hypothetical protein VITISV_030061 [Vitis vinifera])

HSP 1 Score: 153.7 bits (387), Expect = 2.8e-34
Identity = 72/156 (46.15%), Postives = 97/156 (62.18%), Query Frame = 1 

Query: 2   DKSWMTQNRMSREYDLGVERFIKFGLSHVKGSNSIRCPCLNCGNRLLKDVSTVRYHLCAN 61
           ++ WM+++R   EYD GVE+FI F L+H     SI+CPCL CGN L +    +R HL  N
Sbjct: 3   NRDWMSKDRRLVEYDEGVEKFINFALAHSTNHTSIKCPCLRCGNLLCQTPQVIREHLFFN 62

Query: 62  GIVKSYKVWFWHGEELNSDNVTNTMENTVGETDEND--DLFNTVQSIQEQSCNASNTFDT 121
           GI  SY+VW+WHGE+  S   +N  +    +   ND  D  + V + Q    N    F  
Sbjct: 63  GIDLSYRVWYWHGEKGPSGGFSNVSQQRYDKCKYNDVADTIDMVNAAQVNCMNDPQVFGR 122

Query: 122 MFDDAKKPLYPGCKKFTKLSTLVRLYNLKVRYGWTN 156
           + +DA+KPLYPGC K+TKLS LV+LYNLK RYGW++
Sbjct: 123 LLEDAEKPLYPGCMKYTKLSALVKLYNLKARYGWSD 158

The following BLAST results are available for this feature:
BLAST of CSPI03G22210 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI03G22210 vs. TrEMBL
Match NameE-valueIdentityDescription
A5BJV7_VITVI1.2e-3446.15Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011055 PE=4 SV=1[more]
A5ALA6_VITVI2.0e-3446.15Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030061 PE=4 SV=1[more]
A5CB63_VITVI9.8e-3445.51Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040314 PE=4 SV=1[more]
A5C4T9_VITVI3.7e-3344.87Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043919 PE=4 SV=1[more]
A5AGM6_VITVI8.3e-3345.51Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042967 PE=4 SV=1[more]
BLAST of CSPI03G22210 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI03G22210 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659072230|ref|XP_008464173.1|2.3e-5264.97PREDICTED: uncharacterized protein LOC103502117 [Cucumis melo][more]
gi|778688593|ref|XP_004142581.2|5.1e-3650.94PREDICTED: uncharacterized protein LOC101205266 [Cucumis sativus][more]
gi|778688696|ref|XP_011652815.1|1.1e-3550.94PREDICTED: uncharacterized protein LOC105435113 [Cucumis sativus][more]
gi|147779778|emb|CAN72425.1|1.7e-3446.15hypothetical protein VITISV_011055 [Vitis vinifera][more]
gi|147853389|emb|CAN80205.1|2.8e-3446.15hypothetical protein VITISV_030061 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G22210.1CSPI03G22210.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR10775UNCHARACTERIZEDcoord: 2..155
score: 3.5
NoneNo IPR availablePANTHERPTHR10775:SF96SUBFAMILY NOT NAMEDcoord: 2..155
score: 3.5