CSPI03G22180 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G22180
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr3 : 18609848 .. 18610125 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGGAGCAAGGGATGGTGATGATGATGATACGAACGTAGAAAATTTCGCCAAAACCGTAAGGCGGAATTACCAATGGCAATGTGAGAATGAGAGAAAGCTTCGGTTGTATCGAAGAAATGGGGGAAGCTGGTACCGCTGTTGGGCCTTCTTCGTTCAAAGCGGCGGTTTGGCACTTAAAAGAACTAACATTTTACAAATATACTAATTATTTTATTTTAATTTTTGAGGGCACTTGTCAGCGAGCGCGTCTACTCAACTCGCCTCCTCCTCTAG

mRNA sequence

ATGAAGGGAGCAAGGGATGGTGATGATGATGATACGAACGTAGAAAATTTCGCCAAAACCGTAAGGCGGAATTACCAATGGCAATGTGAGAATGAGAGAAAGCTTCGGTTGTATCGAAGAAATGGGGGAAGCTGGGCACTTGTCAGCGAGCGCGTCTACTCAACTCGCCTCCTCCTCTAG

Coding sequence (CDS)

ATGAAGGGAGCAAGGGATGGTGATGATGATGATACGAACGTAGAAAATTTCGCCAAAACCGTAAGGCGGAATTACCAATGGCAATGTGAGAATGAGAGAAAGCTTCGGTTGTATCGAAGAAATGGGGGAAGCTGGGCACTTGTCAGCGAGCGCGTCTACTCAACTCGCCTCCTCCTCTAG
Homology
[Close]
BLAST of CSPI03G22180 vs. TrEMBL
Match: A0A0A0LB35_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G359140 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 4.7e-26
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 1 

Query: 1  MKGARDGDDDDTNVENFAKTVRRNYQWQCENERKLRLYRRNGGSWALVSERVYSTRLLL 60
          MKGARDGDDDDTNVENFAKTVRRNYQWQCENERKLRLYRRNGGSWALVSERVYSTRLLL
Sbjct: 1  MKGARDGDDDDTNVENFAKTVRRNYQWQCENERKLRLYRRNGGSWALVSERVYSTRLLL 59

[Close]
BLAST of CSPI03G22180 vs. NCBI nr
Match: gi|700202744|gb|KGN57877.1| (hypothetical protein Csa_3G359140 [Cucumis sativus])

HSP 1 Score: 124.4 bits (311), Expect = 6.7e-26
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 1 

Query: 1  MKGARDGDDDDTNVENFAKTVRRNYQWQCENERKLRLYRRNGGSWALVSERVYSTRLLL 60
          MKGARDGDDDDTNVENFAKTVRRNYQWQCENERKLRLYRRNGGSWALVSERVYSTRLLL
Sbjct: 1  MKGARDGDDDDTNVENFAKTVRRNYQWQCENERKLRLYRRNGGSWALVSERVYSTRLLL 59

The following BLAST results are available for this feature:
BLAST of CSPI03G22180 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI03G22180 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LB35_CUCSA4.7e-26100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G359140 PE=4 SV=1[more]
BLAST of CSPI03G22180 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI03G22180 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700202744|gb|KGN57877.1|6.7e-26100.00hypothetical protein Csa_3G359140 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G22180.1CSPI03G22180.1mRNA