CSPI03G21630 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI03G21630
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Retrotransposon protein, putative, Ty3-gypsy subclass
Location	Chr3 : 17919094 .. 17921629 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCTCTAAGATTGACTTACGCTCAGGTTATCACCAGTTGAGGATTAGAGACAGTAATATTCCTAAGACTTCTTTTCGTTCGAGGTATGGGCATTATGAATTCATTGTAATGTCTTTTGGTTTGACCAACGCACCTGTAGTATTTATGGATTTGATGAATAGGGTGTTTAAGGATTTCTTAGACACTTTTGTGATAATTTTCATTGATGATATTTTGGTTTATTCCAAGACCGAGGCCGAACATGAGGAACATTTACATAAAGTATTAGAACTCTTCGAGTGAATAAACTTTATGCTAAATTATCTAAGTGCGAATTTTGGTTGAAGCAAGTGGCTTTTCTTGGTCATGTGGTTTCCAGTGAGAGAGTTTCTGTAGATCCTGCAAAGATTTAAGCGGTTACCAGTTGGTCTCGACCCTCTACAGTTAGTGAGGTTCGTAGTTTTCTGGGTTTAGCAGTGTATTACCGGAGGTTTGTGGAGGATTTTTCACATTTGGCTACTCCCTTGACTCAATTGACCAGGAAGAGAACTCTGTTTTTTTGGAGTCCAGCTTGTGAGGATAGTTTTCAGAACCTTAAGCAAAGGTTAGTACTGCACCGATCCTTAAAGTACCAGATGGATCTGGAAGCTTTGTGATTTACAGTGATGCTTCCAAGAGAGGACTTGGTTTTGTTTTGATGCAGCAAGATAAGGTAGTTGCTAATGCCTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTGGAGTTGGCAACAGTGGTTTTTGCACTAAAGATATGGAGACATTACTTGTATGGTGAAAAGATACAAATCTTTACTGACCATAAGAGCCTGAAGTATTTCTTCACCCAGAAGGAGTTAAATACGAGACAGCGAAGGTGGCTCGAGTTGGTAAAAGATCATGACTATGAGATATTGTACCATCCTGGTAAGGCGAATGTGATAGCAGATGCTCTTAGTAGAAAAGTATCACATTCGGCAGCACTTATTACTAGATAGACACCGTTACATCGAAACTTTGAGAGAGCTAAGATTACAGTATCCGTGGGGACGGTCACCTCACAGTTGGCTCAGTTAATGGTGCAACCAACGCTGAGGCGGAAGGTTATTGATGCTCAGAGTAGTGATCCTTATTTGGTGGAGAGACGTCGCCTCGTTGAAACAGGTCAGATTGATGAGTTTTCCATATCCTCTGATGGTGGACTAATGTTAGAGAGATGTTTGTGTGTGCCAACAAACAGTGCAATTAAGATTGACTTACTAGATGAAGCCCATAATTCCCTGTTTTCCATGCATCTTGGTAGTACGAAAATGTATCAGGATCTAAAATGATTTTATTAGTGGCGGAATATGAAAAGGAAAGTGGCAGAATTTGTTAGTAAGTGTCTAGTATGTCAGCAGGTTAAGGCACCTAGACAAAAACCAGCACGTTTGTTACAACCTTTAAGTGTGCCAGAGTGGAAGTGGGAGTATGTGTCGATGGATTTTATTACAGGGCTGCCTAGAACCCTGAAGGGTTTCACAGTGATTTGGGTTGTTGTAGACAGGCTTACGAAATCGGCACATTTCGTACCAGGGAAATCCACTTATACTGATAGTAAGTGGGCACAGTTGTATTTAACTGAGATTGTGAGACTGCATGGAGTGCCTGTGCCGATCGTTTCTGACAGGGATGCACGATTTACTTCCAAGTTTTGGAAGGGACTTCAGATTGCCATGGGTACGAGGTTAGATTTCAGTACAGCTTTTCATCCACAGACTGATGGTCAAACTGAACGTTTGAACCAAATTTTAGAGGATATGCTACGAGCTTGTGTTCTAGAGTTTCCAGGTAGTTGGGACTCTCATTTACATTTGATGGAGTTTGCTTATAACAACAGTTTCCATGCTACCATTGGTATGGCACCATTTGAGGCTTTATATGGTAAATGTTGTAGAACCCCTGTTTGTTGGAGTGAGGTTGGTGAACAAAGGTTGATGGGACCTGAGTTGGTTCAGTCCACAAATGAGGCTATTCAGAAGATTAGAACACGTATGCAGATAGCGCACAGTAGACAGAAGAGTTATGCGGATGTGAGACGGAAAAACCTTGAGTTTGCGGTGGGAGATAAGGTATTCTTTAAGGTAGCACCTATAAAAGGTGTTATGCGTTTTGAGAAGAAAGCGAAGTTGAGTCCTCGTTTTGTTGGACCGTTTGAGATCTTAGAGAGAATTGGTGTTGTGGCGTATCGCTTGGCGCTACCACCATCTCTCTCCGCACTTCATAATGTTTTCCATGTTTCGATGTTGAGGAAGTATGTGGCAGATATATCTCATGTAGTGGACTATGAACCCTTGGAGATTGATGAGAATTTGAGCTATGTGGAACAACCTGTGGAGATTCTGGCTAGAGAGGTAAAGATGCTTCGTAATAGAAGCATTCCATTAATAAAGGTTTTGTGGCAGAATCATCGAATTGAAGAGGCGACATGGGAGCGAGAGGCTGAGATGAAAACTCGATATCCGGAGTTATTTCAGGATTAG

mRNA sequence

ATGTTCTCTAAGATTGACTTACGCTCAGGTTATCACCAGTTGAGGATTAGAGACAGTAATATTCCTAAGACTTCTTTTCGTTCGAGGTATGGGCATTATGAATTCATTGTAATGTCTTTTGGTTTGACCAACGCACCTGTAGTATTTATGGATTTGATGAATAGGGTGTTTAAGGATTTCTTAGACACTTTTGTGATAATTTTCATTGATGATATTTTGGTTTATTCCAAGACCGAGGCCGAACATGAGGAACATTTACATAAAGTATTAGAACTCTTCGATTGGTCTCGACCCTCTACAGTTAGTGAGGTTCGTAGTTTTCTGGGTTTAGCAGTGTATTACCGGAGGTTTGTGGAGGATTTTTCACATTTGGCTACTCCCTTGACTCAATTGACCAGGAAGAGAACTCTGTTTTTTTGGAGTCCAGCTTGTGAGGATAGTTTTCAGAACCTTAAGCAAAGTGATGCTTCCAAGAGAGGACTTGGTTTTGTTTTGATGCAGCAAGATAAGGTAGTTGCTAATGCCTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTGGAGTTGGCAACAGTGGTTTTTGCACTAAAGATATGGAGACATTACTTGTATGGTGAAAAGATACAAATCTTTACTGACCATAAGAGCCTGAAGTATTTCTTCACCCAGAAGGAGTTAAATACGAGACAGCGAAGGTGGCTCGAGTTGGTAAAAGATCATGACTATGAGATATTGTACCATCCTGGTAAGGCGAATGTGATAGCAGATGCTCTTAGTAGAAAAAGAGCTAAGATTACAGTATCCGTGGGGACGGTCACCTCACAGTTGGCTCAGTTAATGGTGCAACCAACGCTGAGGCGGAAGGTTATTGATGCTCAGAGTAGTGATCCTTATTTGGTGGAGAGACGTCGCCTCGTTGAAACAGGTCAGATTGATGAGTTTTCCATATCCTCTGATGGTGGACTAATGTTAGAGAGATGTTTGTGTGTGCCAACAAACAGTGCAATTAAGATTGACTTACTAGATGAAGCCCATAATTCCCTGTTTTCCATGCATCTTGGTATATGTCAGCAGGTTAAGGCACCTAGACAAAAACCAGCACGTTTGTTACAACCTTTAAGTGTGCCAGAGTGGAAGTGGGAGTATGTGTCGATGGATTTTATTACAGGGCTGCCTAGAACCCTGAAGGGTTTCACAGTGATTTGGGTTGTTGTAGACAGGCTTACGAAATCGGCACATTTCGTACCAGGGAAATCCACTTATACTGATAGTAAGTGGGCACAGTTGTATTTAACTGAGATTGTGAGACTGCATGGAGTGCCTGTGCCGATCGTTTCTGACAGGGATGCACGATTTACTTCCAAGTTTTGGAAGGGACTTCAGATTGCCATGGGTACGAGGTTAGATTTCAGTACAGCTTTTCATCCACAGACTGATGGTCAAACTGAACGTTTGAACCAAATTTTAGAGGATATGCTACGAGCTTGTGTTCTAGAGTTTCCAGGTAGTTGGGACTCTCATTTACATTTGATGGAGTTTGCTTATAACAACAGTTTCCATGCTACCATTGGTATGGCACCATTTGAGGCTTTATATGGTAAATGTTGTAGAACCCCTGTTTGTTGGAGTGAGGTTGGTGAACAAAGGTTGATGGGACCTGAGTTGGTTCAGTCCACAAATGAGGCTATTCAGAAGATTAGAACACGTATGCAGATAGCGCACAGTAGACAGAAGAGTTATGCGGATGTGAGACGGAAAAACCTTGAGTTTGCGGTGGGAGATAAGGTATTCTTTAAGGTAGCACCTATAAAAGGTGTTATGCGTTTTGAGAAGAAAGCGAAGTTGAGTCCTCGTTTTGTTGGACCGTTTGAGATCTTAGAGAGAATTGGTGTTGTGGCGTATCGCTTGGCGCTACCACCATCTCTCTCCGCACTTCATAATGTTTTCCATGTTTCGATGTTGAGGAAGTATGTGGCAGATATATCTCATGTAGTGGACTATGAACCCTTGGAGATTGATGAGAATTTGAGCTATGTGGAACAACCTGTGGAGATTCTGGCTAGAGAGGTAAAGATGCTTCGTAATAGAAGCATTCCATTAATAAAGGTTTTGTGGCAGAATCATCGAATTGAAGAGGCGACATGGGAGCGAGAGGCTGAGATGAAAACTCGATATCCGGAGTTATTTCAGGATTAG

Coding sequence (CDS)

ATGTTCTCTAAGATTGACTTACGCTCAGGTTATCACCAGTTGAGGATTAGAGACAGTAATATTCCTAAGACTTCTTTTCGTTCGAGGTATGGGCATTATGAATTCATTGTAATGTCTTTTGGTTTGACCAACGCACCTGTAGTATTTATGGATTTGATGAATAGGGTGTTTAAGGATTTCTTAGACACTTTTGTGATAATTTTCATTGATGATATTTTGGTTTATTCCAAGACCGAGGCCGAACATGAGGAACATTTACATAAAGTATTAGAACTCTTCGATTGGTCTCGACCCTCTACAGTTAGTGAGGTTCGTAGTTTTCTGGGTTTAGCAGTGTATTACCGGAGGTTTGTGGAGGATTTTTCACATTTGGCTACTCCCTTGACTCAATTGACCAGGAAGAGAACTCTGTTTTTTTGGAGTCCAGCTTGTGAGGATAGTTTTCAGAACCTTAAGCAAAGTGATGCTTCCAAGAGAGGACTTGGTTTTGTTTTGATGCAGCAAGATAAGGTAGTTGCTAATGCCTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTGGAGTTGGCAACAGTGGTTTTTGCACTAAAGATATGGAGACATTACTTGTATGGTGAAAAGATACAAATCTTTACTGACCATAAGAGCCTGAAGTATTTCTTCACCCAGAAGGAGTTAAATACGAGACAGCGAAGGTGGCTCGAGTTGGTAAAAGATCATGACTATGAGATATTGTACCATCCTGGTAAGGCGAATGTGATAGCAGATGCTCTTAGTAGAAAAAGAGCTAAGATTACAGTATCCGTGGGGACGGTCACCTCACAGTTGGCTCAGTTAATGGTGCAACCAACGCTGAGGCGGAAGGTTATTGATGCTCAGAGTAGTGATCCTTATTTGGTGGAGAGACGTCGCCTCGTTGAAACAGGTCAGATTGATGAGTTTTCCATATCCTCTGATGGTGGACTAATGTTAGAGAGATGTTTGTGTGTGCCAACAAACAGTGCAATTAAGATTGACTTACTAGATGAAGCCCATAATTCCCTGTTTTCCATGCATCTTGGTATATGTCAGCAGGTTAAGGCACCTAGACAAAAACCAGCACGTTTGTTACAACCTTTAAGTGTGCCAGAGTGGAAGTGGGAGTATGTGTCGATGGATTTTATTACAGGGCTGCCTAGAACCCTGAAGGGTTTCACAGTGATTTGGGTTGTTGTAGACAGGCTTACGAAATCGGCACATTTCGTACCAGGGAAATCCACTTATACTGATAGTAAGTGGGCACAGTTGTATTTAACTGAGATTGTGAGACTGCATGGAGTGCCTGTGCCGATCGTTTCTGACAGGGATGCACGATTTACTTCCAAGTTTTGGAAGGGACTTCAGATTGCCATGGGTACGAGGTTAGATTTCAGTACAGCTTTTCATCCACAGACTGATGGTCAAACTGAACGTTTGAACCAAATTTTAGAGGATATGCTACGAGCTTGTGTTCTAGAGTTTCCAGGTAGTTGGGACTCTCATTTACATTTGATGGAGTTTGCTTATAACAACAGTTTCCATGCTACCATTGGTATGGCACCATTTGAGGCTTTATATGGTAAATGTTGTAGAACCCCTGTTTGTTGGAGTGAGGTTGGTGAACAAAGGTTGATGGGACCTGAGTTGGTTCAGTCCACAAATGAGGCTATTCAGAAGATTAGAACACGTATGCAGATAGCGCACAGTAGACAGAAGAGTTATGCGGATGTGAGACGGAAAAACCTTGAGTTTGCGGTGGGAGATAAGGTATTCTTTAAGGTAGCACCTATAAAAGGTGTTATGCGTTTTGAGAAGAAAGCGAAGTTGAGTCCTCGTTTTGTTGGACCGTTTGAGATCTTAGAGAGAATTGGTGTTGTGGCGTATCGCTTGGCGCTACCACCATCTCTCTCCGCACTTCATAATGTTTTCCATGTTTCGATGTTGAGGAAGTATGTGGCAGATATATCTCATGTAGTGGACTATGAACCCTTGGAGATTGATGAGAATTTGAGCTATGTGGAACAACCTGTGGAGATTCTGGCTAGAGAGGTAAAGATGCTTCGTAATAGAAGCATTCCATTAATAAAGGTTTTGTGGCAGAATCATCGAATTGAAGAGGCGACATGGGAGCGAGAGGCTGAGATGAAAACTCGATATCCGGAGTTATTTCAGGATTAG

Homology

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BLAST of CSPI03G21630 vs. Swiss-Prot
Match: TF25_SCHPO (Transposon Tf2-5 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-5 PE=3 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 1.5e-42
Identity = 106/305 (34.75%), Postives = 159/305 (52.13%), Query Frame = 1


Query: 360  CQQVKAPRQKPARLLQPLSVPEWKWEYVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFV 419
            CQ  K+   KP   LQP+   E  WE +SMDFIT LP +  G+  ++VVVDR +K A  V
Sbjct: 960  CQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILV 1019

Query: 420  PGKSTYTDSKWAQLYLTEIVRLHGVPVPIVSDRDARFTSKFWKGLQIAMGTRLDFSTAFH 479
            P   + T  + A+++   ++   G P  I++D D  FTS+ WK         + FS  + 
Sbjct: 1020 PCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYR 1079

Query: 480  PQTDGQTERLNQILEDMLRACVLEFPGSWDSHLHLMEFAYNNSFHATIGMAPFEALYG-K 539
            PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+ H+   M PFE ++   
Sbjct: 1080 PQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYS 1139

Query: 540  CCRTPVCWSEVGEQRLMGPELVQSTNEAIQKIRTRMQIAHSRQKSYADVRRKNL-EFAVG 599
               +P+      ++     E  Q T +  Q ++  +   + + K Y D++ + + EF  G
Sbjct: 1140 PALSPLELPSFSDKT---DENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPG 1199

Query: 600  DKVFFKVAPIKGVMRFEKKAKLSPRFVGPFEILERIGVVAYRLALPPSLSAL-HNVFHVS 659
            D V  K     G +   K  KL+P F GPF +L++ G   Y L LP S+  +  + FHVS
Sbjct: 1200 DLVMVKRTK-TGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVS 1257

Query: 660  MLRKY 662
             L KY
Sbjct: 1260 HLEKY 1257

[Close]

BLAST of CSPI03G21630 vs. Swiss-Prot
Match: TF26_SCHPO (Transposon Tf2-6 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-6 PE=3 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 1.5e-42
Identity = 106/305 (34.75%), Postives = 159/305 (52.13%), Query Frame = 1


Query: 360  CQQVKAPRQKPARLLQPLSVPEWKWEYVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFV 419
            CQ  K+   KP   LQP+   E  WE +SMDFIT LP +  G+  ++VVVDR +K A  V
Sbjct: 960  CQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILV 1019

Query: 420  PGKSTYTDSKWAQLYLTEIVRLHGVPVPIVSDRDARFTSKFWKGLQIAMGTRLDFSTAFH 479
            P   + T  + A+++   ++   G P  I++D D  FTS+ WK         + FS  + 
Sbjct: 1020 PCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYR 1079

Query: 480  PQTDGQTERLNQILEDMLRACVLEFPGSWDSHLHLMEFAYNNSFHATIGMAPFEALYG-K 539
            PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+ H+   M PFE ++   
Sbjct: 1080 PQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYS 1139

Query: 540  CCRTPVCWSEVGEQRLMGPELVQSTNEAIQKIRTRMQIAHSRQKSYADVRRKNL-EFAVG 599
               +P+      ++     E  Q T +  Q ++  +   + + K Y D++ + + EF  G
Sbjct: 1140 PALSPLELPSFSDKT---DENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPG 1199

Query: 600  DKVFFKVAPIKGVMRFEKKAKLSPRFVGPFEILERIGVVAYRLALPPSLSAL-HNVFHVS 659
            D V  K     G +   K  KL+P F GPF +L++ G   Y L LP S+  +  + FHVS
Sbjct: 1200 DLVMVKRTK-TGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVS 1257

Query: 660  MLRKY 662
             L KY
Sbjct: 1260 HLEKY 1257

[Close]

BLAST of CSPI03G21630 vs. Swiss-Prot
Match: TF24_SCHPO (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-4 PE=3 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 1.5e-42
Identity = 106/305 (34.75%), Postives = 159/305 (52.13%), Query Frame = 1


Query: 360  CQQVKAPRQKPARLLQPLSVPEWKWEYVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFV 419
            CQ  K+   KP   LQP+   E  WE +SMDFIT LP +  G+  ++VVVDR +K A  V
Sbjct: 960  CQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILV 1019

Query: 420  PGKSTYTDSKWAQLYLTEIVRLHGVPVPIVSDRDARFTSKFWKGLQIAMGTRLDFSTAFH 479
            P   + T  + A+++   ++   G P  I++D D  FTS+ WK         + FS  + 
Sbjct: 1020 PCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYR 1079

Query: 480  PQTDGQTERLNQILEDMLRACVLEFPGSWDSHLHLMEFAYNNSFHATIGMAPFEALYG-K 539
            PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+ H+   M PFE ++   
Sbjct: 1080 PQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYS 1139

Query: 540  CCRTPVCWSEVGEQRLMGPELVQSTNEAIQKIRTRMQIAHSRQKSYADVRRKNL-EFAVG 599
               +P+      ++     E  Q T +  Q ++  +   + + K Y D++ + + EF  G
Sbjct: 1140 PALSPLELPSFSDKT---DENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPG 1199

Query: 600  DKVFFKVAPIKGVMRFEKKAKLSPRFVGPFEILERIGVVAYRLALPPSLSAL-HNVFHVS 659
            D V  K     G +   K  KL+P F GPF +L++ G   Y L LP S+  +  + FHVS
Sbjct: 1200 DLVMVKRTK-TGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVS 1257

Query: 660  MLRKY 662
             L KY
Sbjct: 1260 HLEKY 1257

[Close]

BLAST of CSPI03G21630 vs. Swiss-Prot
Match: TF29_SCHPO (Transposon Tf2-9 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-9 PE=3 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 1.5e-42
Identity = 106/305 (34.75%), Postives = 159/305 (52.13%), Query Frame = 1


Query: 360  CQQVKAPRQKPARLLQPLSVPEWKWEYVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFV 419
            CQ  K+   KP   LQP+   E  WE +SMDFIT LP +  G+  ++VVVDR +K A  V
Sbjct: 960  CQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILV 1019

Query: 420  PGKSTYTDSKWAQLYLTEIVRLHGVPVPIVSDRDARFTSKFWKGLQIAMGTRLDFSTAFH 479
            P   + T  + A+++   ++   G P  I++D D  FTS+ WK         + FS  + 
Sbjct: 1020 PCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYR 1079

Query: 480  PQTDGQTERLNQILEDMLRACVLEFPGSWDSHLHLMEFAYNNSFHATIGMAPFEALYG-K 539
            PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+ H+   M PFE ++   
Sbjct: 1080 PQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYS 1139

Query: 540  CCRTPVCWSEVGEQRLMGPELVQSTNEAIQKIRTRMQIAHSRQKSYADVRRKNL-EFAVG 599
               +P+      ++     E  Q T +  Q ++  +   + + K Y D++ + + EF  G
Sbjct: 1140 PALSPLELPSFSDKT---DENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPG 1199

Query: 600  DKVFFKVAPIKGVMRFEKKAKLSPRFVGPFEILERIGVVAYRLALPPSLSAL-HNVFHVS 659
            D V  K     G +   K  KL+P F GPF +L++ G   Y L LP S+  +  + FHVS
Sbjct: 1200 DLVMVKRTK-TGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVS 1257

Query: 660  MLRKY 662
             L KY
Sbjct: 1260 HLEKY 1257

[Close]

BLAST of CSPI03G21630 vs. Swiss-Prot
Match: TF23_SCHPO (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 1.5e-42
Identity = 106/305 (34.75%), Postives = 159/305 (52.13%), Query Frame = 1


Query: 360  CQQVKAPRQKPARLLQPLSVPEWKWEYVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFV 419
            CQ  K+   KP   LQP+   E  WE +SMDFIT LP +  G+  ++VVVDR +K A  V
Sbjct: 960  CQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILV 1019

Query: 420  PGKSTYTDSKWAQLYLTEIVRLHGVPVPIVSDRDARFTSKFWKGLQIAMGTRLDFSTAFH 479
            P   + T  + A+++   ++   G P  I++D D  FTS+ WK         + FS  + 
Sbjct: 1020 PCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYR 1079

Query: 480  PQTDGQTERLNQILEDMLRACVLEFPGSWDSHLHLMEFAYNNSFHATIGMAPFEALYG-K 539
            PQTDGQTER NQ +E +LR      P +W  H+ L++ +YNN+ H+   M PFE ++   
Sbjct: 1080 PQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYS 1139

Query: 540  CCRTPVCWSEVGEQRLMGPELVQSTNEAIQKIRTRMQIAHSRQKSYADVRRKNL-EFAVG 599
               +P+      ++     E  Q T +  Q ++  +   + + K Y D++ + + EF  G
Sbjct: 1140 PALSPLELPSFSDKT---DENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPG 1199

Query: 600  DKVFFKVAPIKGVMRFEKKAKLSPRFVGPFEILERIGVVAYRLALPPSLSAL-HNVFHVS 659
            D V  K     G +   K  KL+P F GPF +L++ G   Y L LP S+  +  + FHVS
Sbjct: 1200 DLVMVKRTK-TGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVS 1257

Query: 660  MLRKY 662
             L KY
Sbjct: 1260 HLEKY 1257

[Close]

BLAST of CSPI03G21630 vs. TrEMBL
Match: Q84KB0_CUCME (Pol protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 1146.3 bits (2964), Expect = 0.0e+00
Identity = 596/844 (70.62%), Postives = 653/844 (77.37%), Query Frame = 1


Query: 1   MFSKIDLRSGYHQLRIRDSNIPKTSFRSRYGHYEFIVMSFGLTNAPVVFMDLMNRVFKDF 60
           +FSKIDLRSGYHQLRI+D ++PKT+FRSRYGHY+FIVMSFGLTNAP VFMDLMNRVF++F
Sbjct: 78  VFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYQFIVMSFGLTNAPAVFMDLMNRVFREF 137

Query: 61  LDTFVIIFIDDILVYSKTEAEHEEHLHKVLEL--------------FDWSRPSTVSEVRS 120
           LDTFVI+FIDDIL+YSKTEAEHEEHL  VL+               F   + S +  V S
Sbjct: 138 LDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVS 197

Query: 121 FLGLAVYYRRF--------------VEDFSHL--------------ATPLTQLTRKRTLF 180
             G++V   +               V  F  L              ATPLTQLTRK   F
Sbjct: 198 KAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPF 257

Query: 181 FWSPACEDSFQNLKQ--------------------SDASKRGLGFVLMQQDKVVANASRQ 240
            WS ACEDSFQ LKQ                    SDASK+GLG VLMQQ KVVA ASRQ
Sbjct: 258 VWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQ 317

Query: 241 LKSHEQNYPTHDLELATVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNTRQRRWL 300
           LKSHEQNYPTHDLELA VVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELN RQRRWL
Sbjct: 318 LKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWL 377

Query: 301 ELVKDHDYEILYHPGKANVIADALSRK-------------------RAKITVSVGTVTSQ 360
           ELVKD+D EILYHPGKANV+ADALSRK                   RA+I V VG VT Q
Sbjct: 378 ELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVLVGAVTMQ 437

Query: 361 LAQLMVQPTLRRKVIDAQSSDPYLVERRRLVETGQIDEFSISSDGGLMLERCLCVPTNSA 420
           LAQL VQPTLR+++IDAQS+DPYLVE+R L E GQ  EFS+SSDGGL+ ER LCVP++SA
Sbjct: 438 LAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSA 497

Query: 421 IKIDLLDEAHNSLFSMHLGICQQVKAPRQ------------------------------K 480
           +K +LL EAH+S FSMH G  + V  P                                K
Sbjct: 498 VKTELLSEAHSSPFSMHPGSTEDVSGPEAGFIGGRNMKREVAEFVSKCLVCQQVKAPRQK 557

Query: 481 PARLLQPLSVPEWKWEYVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKSTYTDSK 540
           PA LLQPLS+PEWKWE VSMDFITGLPRTL+GFTVIWVVVDRLTKSAHFVPGKSTYT SK
Sbjct: 558 PAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASK 617

Query: 541 WAQLYLTEIVRLHGVPVPIVSDRDARFTSKFWKGLQIAMGTRLDFSTAFHPQTDGQTERL 600
           WAQLY++EIVRLHGVPV IVSDRDARFTSKFWKGLQ AMGTRLDFSTAFHPQTDGQTERL
Sbjct: 618 WAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERL 677

Query: 601 NQILEDMLRACVLEFPGSWDSHLHLMEFAYNNSFHATIGMAPFEALYGKCCRTPVCWSEV 660
           NQ+LEDMLRAC LEFPGSWDSHLHLMEFAYNNS+ ATIGMAPFEALYG+CCR+PVCW EV
Sbjct: 678 NQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEV 737

Query: 661 GEQRLMGPELVQSTNEAIQKIRTRMQIAHSRQKSYADVRRKNLEFAVGDKVFFKVAPIKG 720
           GEQRLMGPELVQSTNEAIQKIR+RM  A SRQKSYADVRRK+LEF VGDKVF KVAP+KG
Sbjct: 738 GEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMKG 797

Query: 721 VMRFEKKAKLSPRFVGPFEILERIGVVAYRLALPPSLSALHNVFHVSMLRKYVADISHVV 734
           V+RFE++ KLSPRFVGPFEILERIG VAYRLALPPSLS +H+VFHVSMLRKYV D SHVV
Sbjct: 798 VLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVV 857

[Close]

BLAST of CSPI03G21630 vs. TrEMBL
Match: E5GCE2_CUCME (Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 872.1 bits (2252), Expect = 4.9e-250
Identity = 474/724 (65.47%), Postives = 531/724 (73.34%), Query Frame = 1


Query: 1    MFSKIDLRSGYHQLRIRDSNIPKTSFRSRYGHYEFIVMSFGLTNAPVVFMDLMNRVFKDF 60
            +FSKIDLRSGYHQLRI+D ++PKT+F SRYGHYEFIVMSF LTNAP VFMDLMNRVF++F
Sbjct: 538  LFSKIDLRSGYHQLRIKDRDVPKTAFHSRYGHYEFIVMSFALTNAPSVFMDLMNRVFREF 597

Query: 61   LDTFVIIFIDDILVYSKTEAEHEEHLHKVLELFDWSRPST--------VSEVRSFLGLAV 120
            LDTFVI+FI+DIL+YSK EAEHEEHL  VL+    ++           + +V SFLG  V
Sbjct: 598  LDTFVIVFINDILIYSKIEAEHEEHLRMVLQTLQDNKLYAKFLKCEFWLKQV-SFLGHVV 657

Query: 121  YYRRFVEDFSHLATPLTQLTRKRTLFFWSPACEDSFQNLKQ------------------- 180
                   D + +   +T   R  T+   S ACEDSFQNLKQ                   
Sbjct: 658  SKAGVSVDLAKIEA-VTSWPRPSTV---SEACEDSFQNLKQKLVTTPVLTVPDGSGSFVI 717

Query: 181  -SDASKRGLGFVLMQQDKVVANASRQLKSHEQNYPTHDLELATVVFALKIWRHYLYGEKI 240
             SDASK+G G VLMQQ KVVA ASRQLKSHEQNYPTHDLELA VVFALKIWRHYLYG+KI
Sbjct: 718  YSDASKKGFGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGQKI 777

Query: 241  QIFTDHKSLKYFFTQKELNTRQRRWLELVKDHDYEILYHPGKANVIADALSRKRAKITVS 300
            QIFT HK+LKYFFTQKELN RQRRWLELVKD+D EILYHPGKANV+ADALSRK       
Sbjct: 778  QIFTYHKNLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK------- 837

Query: 301  VGTVTSQLAQLMVQPTLRRKVIDAQSSDPYLVERRRLVETGQIDEFSISSDGGLMLERCL 360
                   LAQL VQPTLR+K+IDAQS++PYLV +R L ETGQ  EFSISSDGGL+ ER L
Sbjct: 838  -------LAQLTVQPTLRQKIIDAQSNNPYLVGKRGLAETGQAVEFSISSDGGLLFERRL 897

Query: 361  CVPTNSAIKIDLLDEAHNSLFSMHLG---ICQQVKAP------RQKPARL---------- 420
             VP++SA+K +LL EAH+S FSMH G   + Q +K        +++ A            
Sbjct: 898  YVPSDSAVKTELLSEAHSSPFSMHSGSTKMYQHLKRVYWWSNIKREVAEFVSKCLVCQQV 957

Query: 421  ----------LQPLSVPEWKWEYVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKS 480
                      LQPLSVP+WKWE VSMDFITGLPRTL+GFTVIWVVVDRLTKSAHF+ GKS
Sbjct: 958  KAPRQKPTGLLQPLSVPKWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFIQGKS 1017

Query: 481  TYTDSKWAQLYLTEIVRLHGVPVPIVSDRDARFTSKFWKGLQIAMGTRLDFSTAFHPQTD 540
            TYT SKWAQLY++EIVRLHGVPV IVS+RDARFTSKF KGLQ AMGTRLDFST FHPQTD
Sbjct: 1018 TYTASKWAQLYMSEIVRLHGVPVSIVSNRDARFTSKFLKGLQAAMGTRLDFSTTFHPQTD 1077

Query: 541  GQTERLNQILEDMLRACVLEFPGSWDSHLHLMEFAYNNSFHATIGMAPFEALYGKCCRTP 600
             QTERLNQ+LEDMLRA  L FPGSWDSHLHLMEFAYNNSF ATI MAPFEALY K CR+P
Sbjct: 1078 CQTERLNQVLEDMLRAYALGFPGSWDSHLHLMEFAYNNSFQATIDMAPFEALYSKRCRSP 1137

Query: 601  VCWSEVGEQRLMGPELVQSTNEAIQKIRTRMQIAHSRQKSYADVRRKNLEFAVGDKVFFK 660
            +CW E                              SRQKSYADVR K+LEF VGDKVF K
Sbjct: 1138 LCWGE------------------------------SRQKSYADVRWKDLEFDVGDKVFLK 1197

Query: 661  VAPIKGVMRFEKKAKLSPRFVGPFEILERIGVVAYRLALPPSLSALHNVFHVSMLRKYVA 668
            VAP+KGV+RFE+  KLSPRFV PFEILERIG VAYRLALPPSLSA+H+VFHVSMLRKY+ 
Sbjct: 1198 VAPMKGVLRFERSGKLSPRFVRPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRKYMP 1212

[Close]

BLAST of CSPI03G21630 vs. TrEMBL
Match: A5BA10_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009489 PE=4 SV=1)

HSP 1 Score: 839.3 bits (2167), Expect = 3.5e-240
Identity = 434/792 (54.80%), Postives = 551/792 (69.57%), Query Frame = 1


Query: 1   MFSKIDLRSGYHQLRIRDSNIPKTSFRSRYGHYEFIVMSFGLTNAPVVFMDLMNRVFKDF 60
           +FSKIDL+SGYHQL +R  ++PKT+FR+RYGHYEF+VM FGLTNAP  FMDLMNRVFK +
Sbjct: 193 VFSKIDLQSGYHQLMVRSEDVPKTAFRTRYGHYEFLVMPFGLTNAPAAFMDLMNRVFKPY 252

Query: 61  LDTFVIIFIDDILVYSKTEAEHEEHLHKVLELFDWSRPSTVSEVRSFLGLA-VYYRRFVE 120
           LD FV +FIDDIL+YS++  EHE HL  VL+        T+ + + +  L    + RF+E
Sbjct: 253 LDQFVAVFIDDILIYSRSREEHEGHLSIVLQ--------TLRDKQLYAKLKKCEFWRFIE 312

Query: 121 DFSHLATPLTQLTRKRTLFFWSPACEDSFQNLKQ--------------------SDASKR 180
            FS +  PLT+LT+K   F WS  CE SFQ LK                     SDAS +
Sbjct: 313 GFSKIVLPLTKLTQKGVKFEWSDDCECSFQELKNRLVSAPILTIPSGSGGFVVYSDASHQ 372

Query: 181 GLGFVLMQQDKVVANASRQLKSHEQNYPTHDLELATVVFALKIWRHYLYGEKIQIFTDHK 240
           GLG VLMQ  +VVA ASRQLK +E+NYPTHD ELA VVFALKIWRH+L+GE  +IFTDHK
Sbjct: 373 GLGCVLMQHGRVVAYASRQLKPYERNYPTHDSELADVVFALKIWRHFLFGETCEIFTDHK 432

Query: 241 SLKYFFTQKELNTRQRRWLELVKDHDYEILYHPGKANVIADALSRKRAKITVSVGTVTSQ 300
           SLKY F+QK+LN RQRRW+EL+KD+DY I YH  KANV+ADALSRK      ++     Q
Sbjct: 433 SLKYLFSQKKLNMRQRRWIELLKDYDYIIQYHSRKANVVADALSRKSVGSLTAIRGCQRQ 492

Query: 301 L--------------------AQLMVQPTLRRKVIDAQSSDPYLVERRRLVETGQIDEFS 360
           L                    A   VQP L  ++   Q +D  LV+    V+ G   +F 
Sbjct: 493 LLEDLRSLQVHMRVLDSGALIANFRVQPDLVGRIKALQKNDLNLVQLMEEVKKGSKLDFV 552

Query: 361 ISSDGGLMLERCLCVPTNSAIKIDLLDEAHNSLFSMHLGICQQVKAPRQK---------- 420
           +S DG L     LCVP +  ++ +LL+EAH S F++H    +  K  RQ           
Sbjct: 553 LSDDGILRFGTRLCVPNDEDLRRELLEEAHCSKFAIHPERTKMYKDLRQNYWWSGMKCDI 612

Query: 421 ---PARLL---QPLSVPEWKWEYVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKS 480
               A+ L   QPL++PEWKWE+++MDF+ GLPRTL G   IWV+VDRLTKSAHF+P K 
Sbjct: 613 AQFVAQCLVCQQPLAIPEWKWEHITMDFVIGLPRTLGGNNAIWVIVDRLTKSAHFLPMKV 672

Query: 481 TYTDSKWAQLYLTEIVRLHGVPVPIVSDRDARFTSKFWKGLQIAMGTRLDFSTAFHPQTD 540
            ++  + A LY+ EIVR+HGVPV IVSDRD RFTS+FW  LQ ++GT+L FSTAFHPQTD
Sbjct: 673 NFSLDRLASLYVKEIVRMHGVPVSIVSDRDPRFTSRFWHSLQKSLGTKLSFSTAFHPQTD 732

Query: 541 GQTERLNQILEDMLRACVLEFPGSWDSHLHLMEFAYNNSFHATIGMAPFEALYGKCCRTP 600
           GQ+ER+ Q+LED+ RAC+L+  G+WD HL L+EFAYNNSF A+IGMAPFEALYG+ CR+P
Sbjct: 733 GQSERVIQVLEDLFRACILDLQGNWDDHLPLVEFAYNNSFQASIGMAPFEALYGRKCRSP 792

Query: 601 VCWSEVGEQRLMGPELVQSTNEAIQKIRTRMQIAHSRQKSYADVRRKNLEFAVGDKVFFK 660
           +CW++VGE++L+GPELVQ T E +  I+ R++ A SR KSY D RR++LEF VGD VF K
Sbjct: 793 ICWNDVGERKLLGPELVQLTVEKVALIKERLKAAQSRHKSYVDHRRRDLEFEVGDHVFLK 852

Query: 661 VAPIKGVMRFEKKAKLSPRFVGPFEILERIGVVAYRLALPPSLSALHNVFHVSMLRKYVA 720
           V+P+K VMRF +K KLSPRFVG FEILER+G +AY++ALPPSLS +HNVFHVS LRKY+ 
Sbjct: 853 VSPMKSVMRFGRKGKLSPRFVGLFEILERVGTLAYKVALPPSLSKVHNVFHVSTLRKYIY 912

Query: 721 DISHVVDYEPLEIDENLSYVEQPVEILAREVKMLRNRSIPLIKVLWQNHRIEEATWEREA 736
           D SHVVD EP++I E+L+Y E PV+I+    K+LR+  + L+KV W NH I EATWE E 
Sbjct: 913 DPSHVVDLEPIQIFEDLTYEEVPVQIVDMMDKVLRHAVVKLVKVQWSNHSIREATWELEE 972

[Close]

BLAST of CSPI03G21630 vs. TrEMBL
Match: Q2QTC6_ORYSJ (Retrotransposon protein, putative, Ty3-gypsy subclass OS=Oryza sativa subsp. japonica GN=LOC_Os12g20110 PE=4 SV=1)

HSP 1 Score: 839.3 bits (2167), Expect = 3.5e-240
Identity = 431/841 (51.25%), Postives = 560/841 (66.59%), Query Frame = 1


Query: 1    MFSKIDLRSGYHQLRIRDSNIPKTSFRSRYGHYEFIVMSFGLTNAPVVFMDLMNRVFKDF 60
            +FSKIDLRSGYHQLRIR+ +IPKT+F +RYG +E  VMSFGLTNAP  FM+LMN+VF ++
Sbjct: 850  VFSKIDLRSGYHQLRIREEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEY 909

Query: 61   LDTFVIIFIDDILVYSKTEAEHEEHLHKVLE----------------------------- 120
            LD FV++FIDDIL+YSKT+ EHEEHL   LE                             
Sbjct: 910  LDKFVVVFIDDILIYSKTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVIS 969

Query: 121  -------------LFDWSRPSTVSEVRSFLGLAVYYRRFVEDFSHLATPLTQLTRKRTLF 180
                         +  W +P TVSE+RSFLGLA YYRRF+E+FS +A P+T+L +K   +
Sbjct: 970  SGGVAVDPSNVESVLSWKQPKTVSEIRSFLGLARYYRRFIENFSKIARPMTRLLQKEVKY 1029

Query: 181  FWSPACEDSFQNLKQS--------------------DASKRGLGFVLMQQDKVVANASRQ 240
             W+  CE SFQ LK+                     DAS+ GLG VLMQ+ KVVA ASRQ
Sbjct: 1030 KWTEDCERSFQELKKRLVTAPVLILPNSRKGFQVYCDASRHGLGCVLMQEGKVVAYASRQ 1089

Query: 241  LKSHEQNYPTHDLELATVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNTRQRRWL 300
            L+ HE NYPTHDLELA VV ALKIWRHYL+G + +++TDHKSLKY FTQ +LN RQRRWL
Sbjct: 1090 LRPHENNYPTHDLELAAVVHALKIWRHYLFGNRTEMYTDHKSLKYIFTQPDLNMRQRRWL 1149

Query: 301  ELVKDHDYEILYHPGKANVIADALSRK----------------RAKITVSVGTVTSQ-LA 360
            EL+KD+D EI YHPGKANV+ADALSRK                +    +++G V+   +A
Sbjct: 1150 ELIKDYDMEIHYHPGKANVVADALSRKSYCNMSEGRRLPWKLCQEFEKLNLGIVSKGFVA 1209

Query: 361  QLMVQPTLRRKVIDAQSSDPYLVERRRLVETGQIDEFSISSDGGLMLERCLCVPTNSAIK 420
             L  QPTL  +V +AQ +DP + E ++ +  G+   +     G + L   +CVP N  +K
Sbjct: 1210 TLEAQPTLFDQVREAQVNDPDIQEIKKNMRRGKAIGYVEDEQGTVWLGERICVPENKELK 1269

Query: 421  IDLLDEAHNSLFSMHLG-----------------------------ICQQVKAPRQKPAR 480
              ++ EAH +L+S+H G                             +CQ+VKA  QKPA 
Sbjct: 1270 DTIMKEAHETLYSIHPGSTKMYQDLKQQFWWASMRREIAEYVALCDVCQRVKAEHQKPAG 1329

Query: 481  LLQPLSVPEWKWEYVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKSTYTDSKWAQ 540
            LLQPL +PEWKWE + MDFITGLPRT  G   IWVVVDRLTK AHF+P K+TYT +K A+
Sbjct: 1330 LLQPLKIPEWKWEEIGMDFITGLPRTSAGHDSIWVVVDRLTKVAHFIPVKTTYTGNKLAE 1389

Query: 541  LYLTEIVRLHGVPVPIVSDRDARFTSKFWKGLQIAMGTRLDFSTAFHPQTDGQTERLNQI 600
            LY+  +V LHGVP  IVSDR ++FTSKFW+ LQ+ MGTRL+FSTA+HPQTDGQTER+NQI
Sbjct: 1390 LYMARVVCLHGVPKKIVSDRGSQFTSKFWQKLQVEMGTRLNFSTAYHPQTDGQTERVNQI 1449

Query: 601  LEDMLRACVLEFPGSWDSHLHLMEFAYNNSFHATIGMAPFEALYGKCCRTPVCWSEVGEQ 660
            LEDMLRACVL+F GSWD +L   EF+YNNS+ A++ MAP+EALYG+ CRTP+ W + GE+
Sbjct: 1450 LEDMLRACVLDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPILWDQTGER 1509

Query: 661  RLMGPELVQSTNEAIQKIRTRMQIAHSRQKSYADVRRKNLEFAVGDKVFFKVAPIKGVMR 720
            ++ G ++++   E ++ I+ R+++A SRQKSYAD RR++L F  GD V+ +V P++GV R
Sbjct: 1510 QVFGTDILREAEEKVKIIQERLRVAQSRQKSYADNRRRDLAFEEGDYVYLRVTPLRGVHR 1569

Query: 721  FEKKAKLSPRFVGPFEILERIGVVAYRLALPPSLSALHNVFHVSMLRKYVADISHVVDYE 734
            F+ K KL+PRFVGPF+I+ R G VAY+L LPPS++ +H+VFHVS L+K +   +   D +
Sbjct: 1570 FQTKGKLAPRFVGPFKIVSRRGEVAYQLELPPSMAGIHDVFHVSQLKKCLRVPTEEADPD 1629

[Close]

BLAST of CSPI03G21630 vs. TrEMBL
Match: Q2R8I6_ORYSJ (Retrotransposon protein, putative, Ty3-gypsy subclass OS=Oryza sativa subsp. japonica GN=LOC_Os11g12060 PE=4 SV=1)

HSP 1 Score: 834.7 bits (2155), Expect = 8.6e-239
Identity = 430/841 (51.13%), Postives = 560/841 (66.59%), Query Frame = 1


Query: 1    MFSKIDLRSGYHQLRIRDSNIPKTSFRSRYGHYEFIVMSFGLTNAPVVFMDLMNRVFKDF 60
            +FSKIDLRSGYHQLRIR+ +IPKT+F +RYG +E  VMSFGLTNAP  FM+LMN+VF ++
Sbjct: 631  VFSKIDLRSGYHQLRIREEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEY 690

Query: 61   LDTFVIIFIDDILVYSKTEAEHEEHLHKVLE----------------------------- 120
            LD FV++FIDDIL+YSKT+ EHEEHL   LE                             
Sbjct: 691  LDKFVVVFIDDILIYSKTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVIS 750

Query: 121  -------------LFDWSRPSTVSEVRSFLGLAVYYRRFVEDFSHLATPLTQLTRKRTLF 180
                         +  W +P TVSE+RSFLGLA YYRRF+E+FS +A P+T+L +K   +
Sbjct: 751  SGGVAVDPSNVESVLSWKQPKTVSEIRSFLGLAGYYRRFIENFSKIARPMTRLLQKEVKY 810

Query: 181  FWSPACEDSFQNLKQS--------------------DASKRGLGFVLMQQDKVVANASRQ 240
             W+  CE SFQ LK+                     DAS+ GLG VLMQ+ KVVA ASRQ
Sbjct: 811  KWTEDCERSFQELKKRLVTAPVLILPDSRKGFQVYCDASRLGLGCVLMQEGKVVAYASRQ 870

Query: 241  LKSHEQNYPTHDLELATVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNTRQRRWL 300
            L+ HE NYPTHDLELA VV ALKIWRHYL+G + +I+TDHKSLKY FTQ +LN RQRRWL
Sbjct: 871  LRPHENNYPTHDLELAAVVHALKIWRHYLFGNRTEIYTDHKSLKYIFTQPDLNMRQRRWL 930

Query: 301  ELVKDHDYEILYHPGKANVIADALSRK----------------RAKITVSVGTVTSQ-LA 360
            EL+KD+D EI YHPGKANV+ADALSRK                +    +++G V++  +A
Sbjct: 931  ELIKDYDMEIHYHPGKANVVADALSRKSYCNMSEGRRLPWELCQEFEKLNLGIVSNGFVA 990

Query: 361  QLMVQPTLRRKVIDAQSSDPYLVERRRLVETGQIDEFSISSDGGLMLERCLCVPTNSAIK 420
             L  +PTL  +V +AQ +DP + E ++ +  G+   +     G + L   +CVP N  +K
Sbjct: 991  ALEAKPTLFDQVREAQVNDPDIQEIKKNMRRGKAIGYVEDEQGTVWLGERICVPENKGLK 1050

Query: 421  IDLLDEAHNSLFSMHLG-----------------------------ICQQVKAPRQKPAR 480
              ++ EAH +L+S+H G                             +CQ+VKA  QKPA 
Sbjct: 1051 DTIMKEAHETLYSIHPGSTKMYQDLKQQFWWASMRREIAEYVALCDVCQRVKAEHQKPAG 1110

Query: 481  LLQPLSVPEWKWEYVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKSTYTDSKWAQ 540
            LLQPL +PEWKWE + MDFITGLPRT  G   IWVVVDRLTK AHF+P K+TYT +K A+
Sbjct: 1111 LLQPLKIPEWKWEEIGMDFITGLPRTSAGHDSIWVVVDRLTKVAHFIPVKTTYTGNKLAE 1170

Query: 541  LYLTEIVRLHGVPVPIVSDRDARFTSKFWKGLQIAMGTRLDFSTAFHPQTDGQTERLNQI 600
            LY+  +V LHGVP  IVSDR ++FTSKFW+ LQ+ MGTRL+FSTA+HPQTDGQTER+NQI
Sbjct: 1171 LYMARVVCLHGVPKKIVSDRGSQFTSKFWQKLQLEMGTRLNFSTAYHPQTDGQTERINQI 1230

Query: 601  LEDMLRACVLEFPGSWDSHLHLMEFAYNNSFHATIGMAPFEALYGKCCRTPVCWSEVGEQ 660
            LEDMLRACVL+F GSWD +L   EF+YNNS+ A++ MAP+EALYG+ CRTP+ W + GE+
Sbjct: 1231 LEDMLRACVLDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGER 1290

Query: 661  RLMGPELVQSTNEAIQKIRTRMQIAHSRQKSYADVRRKNLEFAVGDKVFFKVAPIKGVMR 720
            ++ G ++++   E ++ I+ R+++A SRQKSYAD RR++L F  GD V+ +V P++GV R
Sbjct: 1291 QVFGTDILREAEEKVKIIQERLRVAQSRQKSYADNRRRDLAFEEGDYVYLRVTPLRGVHR 1350

Query: 721  FEKKAKLSPRFVGPFEILERIGVVAYRLALPPSLSALHNVFHVSMLRKYVADISHVVDYE 734
            F+ K KL+PRFVGPF+I+ R G VAY+L LPPS++ +H+VFHVS L+K +   +   D +
Sbjct: 1351 FQTKGKLAPRFVGPFKIVSRRGEVAYQLELPPSMAGIHDVFHVSQLKKCLRVPTEEADPD 1410

[Close]

BLAST of CSPI03G21630 vs. TAIR10
Match: ATMG00860.1 (ATMG00860.1 DNA/RNA polymerases superfamily protein)

HSP 1 Score: 53.5 bits (127), Expect = 6.3e-07
Identity = 25/65 (38.46%), Postives = 39/65 (60.00%), Query Frame = 1


Query: 88  KVLELFDWSRPSTVSEVRSFLGLAVYYRRFVEDFSHLATPLTQLTRKRTLFFWSPACEDS 147
           K+  +  W  P   +E+R FLGL  YYRRFV+++  +  PLT+L +K +L  W+     +
Sbjct: 50  KLEAMVGWPEPKNTTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNSL-KWTEMAALA 109

Query: 148 FQNLK 153
           F+ LK
Sbjct: 110 FKALK 113

[Close]

BLAST of CSPI03G21630 vs. NCBI nr
Match: gi|28558781|gb|AAO45752.1| (pol protein [Cucumis melo subsp. melo])

HSP 1 Score: 1146.3 bits (2964), Expect = 0.0e+00
Identity = 596/844 (70.62%), Postives = 653/844 (77.37%), Query Frame = 1


Query: 1   MFSKIDLRSGYHQLRIRDSNIPKTSFRSRYGHYEFIVMSFGLTNAPVVFMDLMNRVFKDF 60
           +FSKIDLRSGYHQLRI+D ++PKT+FRSRYGHY+FIVMSFGLTNAP VFMDLMNRVF++F
Sbjct: 78  VFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYQFIVMSFGLTNAPAVFMDLMNRVFREF 137

Query: 61  LDTFVIIFIDDILVYSKTEAEHEEHLHKVLEL--------------FDWSRPSTVSEVRS 120
           LDTFVI+FIDDIL+YSKTEAEHEEHL  VL+               F   + S +  V S
Sbjct: 138 LDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVS 197

Query: 121 FLGLAVYYRRF--------------VEDFSHL--------------ATPLTQLTRKRTLF 180
             G++V   +               V  F  L              ATPLTQLTRK   F
Sbjct: 198 KAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPF 257

Query: 181 FWSPACEDSFQNLKQ--------------------SDASKRGLGFVLMQQDKVVANASRQ 240
            WS ACEDSFQ LKQ                    SDASK+GLG VLMQQ KVVA ASRQ
Sbjct: 258 VWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQ 317

Query: 241 LKSHEQNYPTHDLELATVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNTRQRRWL 300
           LKSHEQNYPTHDLELA VVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELN RQRRWL
Sbjct: 318 LKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWL 377

Query: 301 ELVKDHDYEILYHPGKANVIADALSRK-------------------RAKITVSVGTVTSQ 360
           ELVKD+D EILYHPGKANV+ADALSRK                   RA+I V VG VT Q
Sbjct: 378 ELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVLVGAVTMQ 437

Query: 361 LAQLMVQPTLRRKVIDAQSSDPYLVERRRLVETGQIDEFSISSDGGLMLERCLCVPTNSA 420
           LAQL VQPTLR+++IDAQS+DPYLVE+R L E GQ  EFS+SSDGGL+ ER LCVP++SA
Sbjct: 438 LAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSA 497

Query: 421 IKIDLLDEAHNSLFSMHLGICQQVKAPRQ------------------------------K 480
           +K +LL EAH+S FSMH G  + V  P                                K
Sbjct: 498 VKTELLSEAHSSPFSMHPGSTEDVSGPEAGFIGGRNMKREVAEFVSKCLVCQQVKAPRQK 557

Query: 481 PARLLQPLSVPEWKWEYVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKSTYTDSK 540
           PA LLQPLS+PEWKWE VSMDFITGLPRTL+GFTVIWVVVDRLTKSAHFVPGKSTYT SK
Sbjct: 558 PAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASK 617

Query: 541 WAQLYLTEIVRLHGVPVPIVSDRDARFTSKFWKGLQIAMGTRLDFSTAFHPQTDGQTERL 600
           WAQLY++EIVRLHGVPV IVSDRDARFTSKFWKGLQ AMGTRLDFSTAFHPQTDGQTERL
Sbjct: 618 WAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERL 677

Query: 601 NQILEDMLRACVLEFPGSWDSHLHLMEFAYNNSFHATIGMAPFEALYGKCCRTPVCWSEV 660
           NQ+LEDMLRAC LEFPGSWDSHLHLMEFAYNNS+ ATIGMAPFEALYG+CCR+PVCW EV
Sbjct: 678 NQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEV 737

Query: 661 GEQRLMGPELVQSTNEAIQKIRTRMQIAHSRQKSYADVRRKNLEFAVGDKVFFKVAPIKG 720
           GEQRLMGPELVQSTNEAIQKIR+RM  A SRQKSYADVRRK+LEF VGDKVF KVAP+KG
Sbjct: 738 GEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMKG 797

Query: 721 VMRFEKKAKLSPRFVGPFEILERIGVVAYRLALPPSLSALHNVFHVSMLRKYVADISHVV 734
           V+RFE++ KLSPRFVGPFEILERIG VAYRLALPPSLS +H+VFHVSMLRKYV D SHVV
Sbjct: 798 VLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVV 857

[Close]

BLAST of CSPI03G21630 vs. NCBI nr
Match: gi|307136318|gb|ADN34141.1| (ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 872.1 bits (2252), Expect = 7.0e-250
Identity = 474/724 (65.47%), Postives = 531/724 (73.34%), Query Frame = 1


Query: 1    MFSKIDLRSGYHQLRIRDSNIPKTSFRSRYGHYEFIVMSFGLTNAPVVFMDLMNRVFKDF 60
            +FSKIDLRSGYHQLRI+D ++PKT+F SRYGHYEFIVMSF LTNAP VFMDLMNRVF++F
Sbjct: 538  LFSKIDLRSGYHQLRIKDRDVPKTAFHSRYGHYEFIVMSFALTNAPSVFMDLMNRVFREF 597

Query: 61   LDTFVIIFIDDILVYSKTEAEHEEHLHKVLELFDWSRPST--------VSEVRSFLGLAV 120
            LDTFVI+FI+DIL+YSK EAEHEEHL  VL+    ++           + +V SFLG  V
Sbjct: 598  LDTFVIVFINDILIYSKIEAEHEEHLRMVLQTLQDNKLYAKFLKCEFWLKQV-SFLGHVV 657

Query: 121  YYRRFVEDFSHLATPLTQLTRKRTLFFWSPACEDSFQNLKQ------------------- 180
                   D + +   +T   R  T+   S ACEDSFQNLKQ                   
Sbjct: 658  SKAGVSVDLAKIEA-VTSWPRPSTV---SEACEDSFQNLKQKLVTTPVLTVPDGSGSFVI 717

Query: 181  -SDASKRGLGFVLMQQDKVVANASRQLKSHEQNYPTHDLELATVVFALKIWRHYLYGEKI 240
             SDASK+G G VLMQQ KVVA ASRQLKSHEQNYPTHDLELA VVFALKIWRHYLYG+KI
Sbjct: 718  YSDASKKGFGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGQKI 777

Query: 241  QIFTDHKSLKYFFTQKELNTRQRRWLELVKDHDYEILYHPGKANVIADALSRKRAKITVS 300
            QIFT HK+LKYFFTQKELN RQRRWLELVKD+D EILYHPGKANV+ADALSRK       
Sbjct: 778  QIFTYHKNLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK------- 837

Query: 301  VGTVTSQLAQLMVQPTLRRKVIDAQSSDPYLVERRRLVETGQIDEFSISSDGGLMLERCL 360
                   LAQL VQPTLR+K+IDAQS++PYLV +R L ETGQ  EFSISSDGGL+ ER L
Sbjct: 838  -------LAQLTVQPTLRQKIIDAQSNNPYLVGKRGLAETGQAVEFSISSDGGLLFERRL 897

Query: 361  CVPTNSAIKIDLLDEAHNSLFSMHLG---ICQQVKAP------RQKPARL---------- 420
             VP++SA+K +LL EAH+S FSMH G   + Q +K        +++ A            
Sbjct: 898  YVPSDSAVKTELLSEAHSSPFSMHSGSTKMYQHLKRVYWWSNIKREVAEFVSKCLVCQQV 957

Query: 421  ----------LQPLSVPEWKWEYVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKS 480
                      LQPLSVP+WKWE VSMDFITGLPRTL+GFTVIWVVVDRLTKSAHF+ GKS
Sbjct: 958  KAPRQKPTGLLQPLSVPKWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFIQGKS 1017

Query: 481  TYTDSKWAQLYLTEIVRLHGVPVPIVSDRDARFTSKFWKGLQIAMGTRLDFSTAFHPQTD 540
            TYT SKWAQLY++EIVRLHGVPV IVS+RDARFTSKF KGLQ AMGTRLDFST FHPQTD
Sbjct: 1018 TYTASKWAQLYMSEIVRLHGVPVSIVSNRDARFTSKFLKGLQAAMGTRLDFSTTFHPQTD 1077

Query: 541  GQTERLNQILEDMLRACVLEFPGSWDSHLHLMEFAYNNSFHATIGMAPFEALYGKCCRTP 600
             QTERLNQ+LEDMLRA  L FPGSWDSHLHLMEFAYNNSF ATI MAPFEALY K CR+P
Sbjct: 1078 CQTERLNQVLEDMLRAYALGFPGSWDSHLHLMEFAYNNSFQATIDMAPFEALYSKRCRSP 1137

Query: 601  VCWSEVGEQRLMGPELVQSTNEAIQKIRTRMQIAHSRQKSYADVRRKNLEFAVGDKVFFK 660
            +CW E                              SRQKSYADVR K+LEF VGDKVF K
Sbjct: 1138 LCWGE------------------------------SRQKSYADVRWKDLEFDVGDKVFLK 1197

Query: 661  VAPIKGVMRFEKKAKLSPRFVGPFEILERIGVVAYRLALPPSLSALHNVFHVSMLRKYVA 668
            VAP+KGV+RFE+  KLSPRFV PFEILERIG VAYRLALPPSLSA+H+VFHVSMLRKY+ 
Sbjct: 1198 VAPMKGVLRFERSGKLSPRFVRPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRKYMP 1212

[Close]

BLAST of CSPI03G21630 vs. NCBI nr
Match: gi|77555016|gb|ABA97812.1| (retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa Japonica Group])

HSP 1 Score: 839.3 bits (2167), Expect = 5.0e-240
Identity = 431/841 (51.25%), Postives = 560/841 (66.59%), Query Frame = 1


Query: 1    MFSKIDLRSGYHQLRIRDSNIPKTSFRSRYGHYEFIVMSFGLTNAPVVFMDLMNRVFKDF 60
            +FSKIDLRSGYHQLRIR+ +IPKT+F +RYG +E  VMSFGLTNAP  FM+LMN+VF ++
Sbjct: 850  VFSKIDLRSGYHQLRIREEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEY 909

Query: 61   LDTFVIIFIDDILVYSKTEAEHEEHLHKVLE----------------------------- 120
            LD FV++FIDDIL+YSKT+ EHEEHL   LE                             
Sbjct: 910  LDKFVVVFIDDILIYSKTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVIS 969

Query: 121  -------------LFDWSRPSTVSEVRSFLGLAVYYRRFVEDFSHLATPLTQLTRKRTLF 180
                         +  W +P TVSE+RSFLGLA YYRRF+E+FS +A P+T+L +K   +
Sbjct: 970  SGGVAVDPSNVESVLSWKQPKTVSEIRSFLGLARYYRRFIENFSKIARPMTRLLQKEVKY 1029

Query: 181  FWSPACEDSFQNLKQS--------------------DASKRGLGFVLMQQDKVVANASRQ 240
             W+  CE SFQ LK+                     DAS+ GLG VLMQ+ KVVA ASRQ
Sbjct: 1030 KWTEDCERSFQELKKRLVTAPVLILPNSRKGFQVYCDASRHGLGCVLMQEGKVVAYASRQ 1089

Query: 241  LKSHEQNYPTHDLELATVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNTRQRRWL 300
            L+ HE NYPTHDLELA VV ALKIWRHYL+G + +++TDHKSLKY FTQ +LN RQRRWL
Sbjct: 1090 LRPHENNYPTHDLELAAVVHALKIWRHYLFGNRTEMYTDHKSLKYIFTQPDLNMRQRRWL 1149

Query: 301  ELVKDHDYEILYHPGKANVIADALSRK----------------RAKITVSVGTVTSQ-LA 360
            EL+KD+D EI YHPGKANV+ADALSRK                +    +++G V+   +A
Sbjct: 1150 ELIKDYDMEIHYHPGKANVVADALSRKSYCNMSEGRRLPWKLCQEFEKLNLGIVSKGFVA 1209

Query: 361  QLMVQPTLRRKVIDAQSSDPYLVERRRLVETGQIDEFSISSDGGLMLERCLCVPTNSAIK 420
             L  QPTL  +V +AQ +DP + E ++ +  G+   +     G + L   +CVP N  +K
Sbjct: 1210 TLEAQPTLFDQVREAQVNDPDIQEIKKNMRRGKAIGYVEDEQGTVWLGERICVPENKELK 1269

Query: 421  IDLLDEAHNSLFSMHLG-----------------------------ICQQVKAPRQKPAR 480
              ++ EAH +L+S+H G                             +CQ+VKA  QKPA 
Sbjct: 1270 DTIMKEAHETLYSIHPGSTKMYQDLKQQFWWASMRREIAEYVALCDVCQRVKAEHQKPAG 1329

Query: 481  LLQPLSVPEWKWEYVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKSTYTDSKWAQ 540
            LLQPL +PEWKWE + MDFITGLPRT  G   IWVVVDRLTK AHF+P K+TYT +K A+
Sbjct: 1330 LLQPLKIPEWKWEEIGMDFITGLPRTSAGHDSIWVVVDRLTKVAHFIPVKTTYTGNKLAE 1389

Query: 541  LYLTEIVRLHGVPVPIVSDRDARFTSKFWKGLQIAMGTRLDFSTAFHPQTDGQTERLNQI 600
            LY+  +V LHGVP  IVSDR ++FTSKFW+ LQ+ MGTRL+FSTA+HPQTDGQTER+NQI
Sbjct: 1390 LYMARVVCLHGVPKKIVSDRGSQFTSKFWQKLQVEMGTRLNFSTAYHPQTDGQTERVNQI 1449

Query: 601  LEDMLRACVLEFPGSWDSHLHLMEFAYNNSFHATIGMAPFEALYGKCCRTPVCWSEVGEQ 660
            LEDMLRACVL+F GSWD +L   EF+YNNS+ A++ MAP+EALYG+ CRTP+ W + GE+
Sbjct: 1450 LEDMLRACVLDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPILWDQTGER 1509

Query: 661  RLMGPELVQSTNEAIQKIRTRMQIAHSRQKSYADVRRKNLEFAVGDKVFFKVAPIKGVMR 720
            ++ G ++++   E ++ I+ R+++A SRQKSYAD RR++L F  GD V+ +V P++GV R
Sbjct: 1510 QVFGTDILREAEEKVKIIQERLRVAQSRQKSYADNRRRDLAFEEGDYVYLRVTPLRGVHR 1569

Query: 721  FEKKAKLSPRFVGPFEILERIGVVAYRLALPPSLSALHNVFHVSMLRKYVADISHVVDYE 734
            F+ K KL+PRFVGPF+I+ R G VAY+L LPPS++ +H+VFHVS L+K +   +   D +
Sbjct: 1570 FQTKGKLAPRFVGPFKIVSRRGEVAYQLELPPSMAGIHDVFHVSQLKKCLRVPTEEADPD 1629

[Close]

BLAST of CSPI03G21630 vs. NCBI nr
Match: gi|147769978|emb|CAN61139.1| (hypothetical protein VITISV_009489 [Vitis vinifera])

HSP 1 Score: 839.3 bits (2167), Expect = 5.0e-240
Identity = 434/792 (54.80%), Postives = 551/792 (69.57%), Query Frame = 1


Query: 1   MFSKIDLRSGYHQLRIRDSNIPKTSFRSRYGHYEFIVMSFGLTNAPVVFMDLMNRVFKDF 60
           +FSKIDL+SGYHQL +R  ++PKT+FR+RYGHYEF+VM FGLTNAP  FMDLMNRVFK +
Sbjct: 193 VFSKIDLQSGYHQLMVRSEDVPKTAFRTRYGHYEFLVMPFGLTNAPAAFMDLMNRVFKPY 252

Query: 61  LDTFVIIFIDDILVYSKTEAEHEEHLHKVLELFDWSRPSTVSEVRSFLGLA-VYYRRFVE 120
           LD FV +FIDDIL+YS++  EHE HL  VL+        T+ + + +  L    + RF+E
Sbjct: 253 LDQFVAVFIDDILIYSRSREEHEGHLSIVLQ--------TLRDKQLYAKLKKCEFWRFIE 312

Query: 121 DFSHLATPLTQLTRKRTLFFWSPACEDSFQNLKQ--------------------SDASKR 180
            FS +  PLT+LT+K   F WS  CE SFQ LK                     SDAS +
Sbjct: 313 GFSKIVLPLTKLTQKGVKFEWSDDCECSFQELKNRLVSAPILTIPSGSGGFVVYSDASHQ 372

Query: 181 GLGFVLMQQDKVVANASRQLKSHEQNYPTHDLELATVVFALKIWRHYLYGEKIQIFTDHK 240
           GLG VLMQ  +VVA ASRQLK +E+NYPTHD ELA VVFALKIWRH+L+GE  +IFTDHK
Sbjct: 373 GLGCVLMQHGRVVAYASRQLKPYERNYPTHDSELADVVFALKIWRHFLFGETCEIFTDHK 432

Query: 241 SLKYFFTQKELNTRQRRWLELVKDHDYEILYHPGKANVIADALSRKRAKITVSVGTVTSQ 300
           SLKY F+QK+LN RQRRW+EL+KD+DY I YH  KANV+ADALSRK      ++     Q
Sbjct: 433 SLKYLFSQKKLNMRQRRWIELLKDYDYIIQYHSRKANVVADALSRKSVGSLTAIRGCQRQ 492

Query: 301 L--------------------AQLMVQPTLRRKVIDAQSSDPYLVERRRLVETGQIDEFS 360
           L                    A   VQP L  ++   Q +D  LV+    V+ G   +F 
Sbjct: 493 LLEDLRSLQVHMRVLDSGALIANFRVQPDLVGRIKALQKNDLNLVQLMEEVKKGSKLDFV 552

Query: 361 ISSDGGLMLERCLCVPTNSAIKIDLLDEAHNSLFSMHLGICQQVKAPRQK---------- 420
           +S DG L     LCVP +  ++ +LL+EAH S F++H    +  K  RQ           
Sbjct: 553 LSDDGILRFGTRLCVPNDEDLRRELLEEAHCSKFAIHPERTKMYKDLRQNYWWSGMKCDI 612

Query: 421 ---PARLL---QPLSVPEWKWEYVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKS 480
               A+ L   QPL++PEWKWE+++MDF+ GLPRTL G   IWV+VDRLTKSAHF+P K 
Sbjct: 613 AQFVAQCLVCQQPLAIPEWKWEHITMDFVIGLPRTLGGNNAIWVIVDRLTKSAHFLPMKV 672

Query: 481 TYTDSKWAQLYLTEIVRLHGVPVPIVSDRDARFTSKFWKGLQIAMGTRLDFSTAFHPQTD 540
            ++  + A LY+ EIVR+HGVPV IVSDRD RFTS+FW  LQ ++GT+L FSTAFHPQTD
Sbjct: 673 NFSLDRLASLYVKEIVRMHGVPVSIVSDRDPRFTSRFWHSLQKSLGTKLSFSTAFHPQTD 732

Query: 541 GQTERLNQILEDMLRACVLEFPGSWDSHLHLMEFAYNNSFHATIGMAPFEALYGKCCRTP 600
           GQ+ER+ Q+LED+ RAC+L+  G+WD HL L+EFAYNNSF A+IGMAPFEALYG+ CR+P
Sbjct: 733 GQSERVIQVLEDLFRACILDLQGNWDDHLPLVEFAYNNSFQASIGMAPFEALYGRKCRSP 792

Query: 601 VCWSEVGEQRLMGPELVQSTNEAIQKIRTRMQIAHSRQKSYADVRRKNLEFAVGDKVFFK 660
           +CW++VGE++L+GPELVQ T E +  I+ R++ A SR KSY D RR++LEF VGD VF K
Sbjct: 793 ICWNDVGERKLLGPELVQLTVEKVALIKERLKAAQSRHKSYVDHRRRDLEFEVGDHVFLK 852

Query: 661 VAPIKGVMRFEKKAKLSPRFVGPFEILERIGVVAYRLALPPSLSALHNVFHVSMLRKYVA 720
           V+P+K VMRF +K KLSPRFVG FEILER+G +AY++ALPPSLS +HNVFHVS LRKY+ 
Sbjct: 853 VSPMKSVMRFGRKGKLSPRFVGLFEILERVGTLAYKVALPPSLSKVHNVFHVSTLRKYIY 912

Query: 721 DISHVVDYEPLEIDENLSYVEQPVEILAREVKMLRNRSIPLIKVLWQNHRIEEATWEREA 736
           D SHVVD EP++I E+L+Y E PV+I+    K+LR+  + L+KV W NH I EATWE E 
Sbjct: 913 DPSHVVDLEPIQIFEDLTYEEVPVQIVDMMDKVLRHAVVKLVKVQWSNHSIREATWELEE 972

[Close]

BLAST of CSPI03G21630 vs. NCBI nr
Match: gi|1012113262|ref|XP_015960510.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC107484454 [Arachis duranensis])

HSP 1 Score: 837.0 bits (2161), Expect = 2.5e-239
Identity = 437/799 (54.69%), Postives = 551/799 (68.96%), Query Frame = 1


Query: 2    FSKIDLRSGYHQLRIRDSNIPKTSFRSRYGHYEFIVMSFGLTNAPVVFMDLMNRVFKDFL 61
            FSKIDLRSGYHQL+I++ +IPKT+FR+RY HYEF+VMSF LTNAP  FMDLMNRVFK FL
Sbjct: 547  FSKIDLRSGYHQLKIKEEDIPKTTFRTRYRHYEFLVMSFCLTNAPAAFMDLMNRVFKPFL 606

Query: 62   DTFVIIFIDDILVYSKTEAEHEEHL---------HKVLELFD----W------------- 121
            D FVIIFIDDILVYSK+  EHE HL         HK+   F     W             
Sbjct: 607  DRFVIIFIDDILVYSKSATEHEYHLRIVLQTLRDHKLYAKFSKCEFWLDQVTFLGHVISK 666

Query: 122  ----SRPSTVSEVRSFL------------GLAVYYRRFVEDFSHLATPLTQLTRKRTLFF 181
                  P  V  V+ +             GLA YYRRF++DFS ++TPLT+LT+K   F 
Sbjct: 667  DGIMVDPKKVEAVQKWPRPTTVTEIRSFLGLAGYYRRFIKDFSRISTPLTKLTQKNVKFQ 726

Query: 182  WSPACEDSFQNLKQ--------------------SDASKRGLGFVLMQQDKVVANASRQL 241
            WS ACE+ FQ LK                      DAS+ GLG VLMQ  +V+A ASRQL
Sbjct: 727  WSEACEEGFQTLKACLTSAPVLVLPSGSGGFSVFCDASRIGLGCVLMQHGRVIAYASRQL 786

Query: 242  KSHEQNYPTHDLELATVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNTRQRRWLE 301
            K HEQNYPTHD+E+A VVFALKIWRHYLYGE  +I+TDHKSLKY F QK+LN RQRRW+E
Sbjct: 787  KKHEQNYPTHDMEMAAVVFALKIWRHYLYGETCEIYTDHKSLKYIFQQKDLNLRQRRWME 846

Query: 302  LVKDHDYEILYHPGKANVIADALSRKR----AKITVSVGTVTSQLAQLMVQPTLRRKVID 361
            L+KD+D  ILYHPGKANV+ADALSRK     A IT+    +  ++ QL           D
Sbjct: 847  LLKDYDCTILYHPGKANVVADALSRKSMGSLAHITLGRRPIVEEVHQLEASGI----QFD 906

Query: 362  AQSSDPYLVERRRLVETGQIDEFSISSDGGLMLERCLCVPTNSAIKIDLLDEAHNSLFSM 421
               S  +L   R   ++  I++  ++                  +K D+       +F  
Sbjct: 907  LGESGVFLAHVR--TQSSLIEQIKVAQSDWW-----------EGMKKDI------GVFVS 966

Query: 422  HLGICQQVKAPRQKPARLLQPLSVPEWKWEYVSMDFITGLPRTLKGFTVIWVVVDRLTKS 481
            H   CQQVKA  Q+PA LLQ + +PEWKWE ++MDF+TGLPR+ KGF  IWV+VDR+TKS
Sbjct: 967  HCLTCQQVKAEHQRPAGLLQQIEIPEWKWERITMDFVTGLPRSFKGFDSIWVIVDRMTKS 1026

Query: 482  AHFVPGKSTYTDSKWAQLYLTEIVRLHGVPVPIVSDRDARFTSKFWKGLQIAMGTRLDFS 541
            AHF+P K+T++ +++AQLY+ EIV+LHG+PV I+SDR  +FTS FWK  Q A+GTRLD S
Sbjct: 1027 AHFLPVKTTFSAARYAQLYVDEIVKLHGIPVSIISDRGPQFTSHFWKSFQKALGTRLDLS 1086

Query: 542  TAFHPQTDGQTERLNQILEDMLRACVLEFPGSWDSHLHLMEFAYNNSFHATIGMAPFEAL 601
            TAFHPQTDGQ+ER  QILEDMLR CVL+F G+WDS+L L+EF+YNNS+ A+I MAPFEAL
Sbjct: 1087 TAFHPQTDGQSERTIQILEDMLRCCVLDFGGNWDSYLPLIEFSYNNSYQASIQMAPFEAL 1146

Query: 602  YGKCCRTPVCWSEVGEQRLMGPELVQSTNEAIQKIRTRMQIAHSRQKSYADVRRKNLEFA 661
            YG+ CR+P+ W EVGE +L+GP LVQ   E ++ IR R+  A SRQK+Y D RR+NLEF+
Sbjct: 1147 YGRRCRSPIGWFEVGEVKLLGPNLVQDAVEKVRIIRERLLAAQSRQKAYVDNRRRNLEFS 1206

Query: 662  VGDKVFFKVAPIKGVMRFEKKAKLSPRFVGPFEILERIGVVAYRLALPPSLSALHNVFHV 721
            VGD+VF KV+P+KGVMRF K+ KLSPR++GPFEIL+RIGVVAYRLALP  LS +H VFH+
Sbjct: 1207 VGDQVFLKVSPMKGVMRFGKRGKLSPRYIGPFEILDRIGVVAYRLALPSELSMIHPVFHM 1266

Query: 722  SMLRKYVADISHVVDYEPLEIDENLSYVEQPVEILAREVKMLRNRSIPLIKVLWQNHRIE 735
            SMLRKY++D SHV+  + +E+ E+LS+ E+PV I+ R+VK LR++ I  +KV+ +NH +E
Sbjct: 1267 SMLRKYLSDPSHVLTPQAIELKEDLSFEEEPVAIVDRQVKKLRSKEIASVKVVXKNHSVE 1322

The following BLAST results are available for this feature:

BLAST of CSPI03G21630 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TF25_SCHPO	1.5e-42	34.75	Transposon Tf2-5 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
TF26_SCHPO	1.5e-42	34.75	Transposon Tf2-6 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
TF24_SCHPO	1.5e-42	34.75	Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
TF29_SCHPO	1.5e-42	34.75	Transposon Tf2-9 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
TF23_SCHPO	1.5e-42	34.75	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of CSPI03G21630 vs. TrEMBL


Match Name	E-value	Identity	Description
Q84KB0_CUCME	0.0e+00	70.62	Pol protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
E5GCE2_CUCME	4.9e-250	65.47	Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A5BA10_VITVI	3.5e-240	54.80	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009489 PE=4 SV=1	[more]
Q2QTC6_ORYSJ	3.5e-240	51.25	Retrotransposon protein, putative, Ty3-gypsy subclass OS=Oryza sativa subsp. jap...	[more]
Q2R8I6_ORYSJ	8.6e-239	51.13	Retrotransposon protein, putative, Ty3-gypsy subclass OS=Oryza sativa subsp. jap...	[more]

BLAST of CSPI03G21630 vs. TAIR10


Match Name	E-value	Identity	Description
ATMG00860.1	6.3e-07	38.46	ATMG00860.1 DNA/RNA polymerases superfamily protein	[more]

BLAST of CSPI03G21630 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|28558781\|gb\|AAO45752.1\|	0.0e+00	70.62	pol protein [Cucumis melo subsp. melo]	[more]
gi\|307136318\|gb\|ADN34141.1\|	7.0e-250	65.47	ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]	[more]
gi\|77555016\|gb\|ABA97812.1\|	5.0e-240	51.25	retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa Japonica Gro...	[more]
gi\|147769978\|emb\|CAN61139.1\|	5.0e-240	54.80	hypothetical protein VITISV_009489 [Vitis vinifera]	[more]
gi\|1012113262\|ref\|XP_015960510.1\|	2.5e-239	54.69	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC107484454 [Arachis du...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000477	RT_dom
IPR001584	Integrase_cat-core
IPR012337	RNaseH-like_sf
IPR023780	Chromo_domain

Vocabulary: **Biological Process**
Term	Definition
GO:0015074	DNA integration

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006310	DNA recombination
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G21630.1	CSPI03G21630.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 1..95 score: 4.3
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 385..496 score: 3.2
IPR001584	Integrase, catalytic core	PROFILE	PS50994	INTEGRASE	coord: 372..539 score: 19
IPR012337	Ribonuclease H-like domain	GENE3D	G3DSA:3.30.420.10		coord: 384..543 score: 7.8
IPR012337	Ribonuclease H-like domain	unknown	SSF53098	Ribonuclease H-like	coord: 377..533 score: 5.31
IPR023780	Chromo domain	PFAM	PF00385	Chromo	coord: 686..734 score: 7.
None	No IPR available	unknown	Coil	Coil	coord: 165..185 scor
None	No IPR available	GENE3D	G3DSA:3.30.70.270		coord: 4..91 score: 9.
None	No IPR available	PANTHER	PTHR24559	FAMILY NOT NAMED	coord: 1..733 score:
None	No IPR available	PANTHER	PTHR24559:SF207	SUBFAMILY NOT NAMED	coord: 1..733 score:
None	No IPR available	unknown	SSF56672	DNA/RNA polymerases	coord: 2..250 score: 6.23

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI03G21630	Melon (DHL92) v3.6.1	cpimedB240
CSPI03G21630	Cucumber (Gy14) v2	cgybcpiB110
CSPI03G21630	Silver-seed gourd	carcpiB0798
CSPI03G21630	Cucumber (Chinese Long) v3	cpicucB144
CSPI03G21630	Watermelon (97103) v2	cpiwmbB224
CSPI03G21630	Cucumber (Gy14) v1	cgycpiB554
CSPI03G21630	Cucurbita maxima (Rimu)	cmacpiB244
CSPI03G21630	Cucurbita maxima (Rimu)	cmacpiB458
CSPI03G21630	Cucurbita moschata (Rifu)	cmocpiB232
CSPI03G21630	Cucurbita moschata (Rifu)	cmocpiB446
CSPI03G21630	Cucumber (Chinese Long) v2	cpicuB120
CSPI03G21630	Melon (DHL92) v3.5.1	cpimeB243
CSPI03G21630	Watermelon (Charleston Gray)	cpiwcgB240
CSPI03G21630	Watermelon (97103) v1	cpiwmB245
CSPI03G21630	Cucurbita pepo (Zucchini)	cpecpiB552
CSPI03G21630	Cucurbita pepo (Zucchini)	cpecpiB602
CSPI03G21630	Bottle gourd (USVL1VR-Ls)	cpilsiB210