CSPI03G21590 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI03G21590
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Transposon Ty3-G Gag-Pol polyprotein
Location	Chr3 : 17906178 .. 17907265 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGAAGAAGACTCGAGTTAACAAAAAAGGGGAGTATGACAACGACAATGTTCAACAAGTCGTCCATAAAATTGTAAGACTTTTTGTAGATTACACATTTGAACTAACCATACATAAGCATTTCTATAACTTAGATTGGTTTTGGTTTTAGGATGAGATTTCAATGAATACAAATTCATCGTCTAAAAAAGGATAAGCTGGCCAAATTGTACATTAATAAGATTGTAAGTGCGTATGGAGCTCCCGTATCTGTTACGTCTAATAATGATTCCAAGTTTACCCTAAAGTTTTGGCTGAGTTTGCAACAAGTAATAGGCACTAATTTACATTTTAGTACCAGATTTCATCCTATGACAGATTGTCAATTAGAAAGAACCGTCAGACCTTGGAAGATATGCTTCAAGCTTGTGATTTTCAGTTCGAAGGTAATTGGGATGTTCATTTGTCATTAATGAAATTTACATATAATAATAGTTTCCATTCAAGTGTTGGAATGGCACCTTATGAGGCTTTGTATGGTAGACGTTGTAGAACCCCCATGTGTTGGGATGAAGTTGGGGAAAGAAAGTCAGAAAATGTGATTAGTAGAAAAAAGTTGAAAACAACACAAGATTGTCAAAAGAGTTATAAAGATAAGCGACGGAGAGACTTGAAATTTGAGGTTGGTGACAAAGTCTTTCTAAAGTTATCTCCTTGGAAGGGTGTGGTTCATTATGGCAGAAAAGACAAGCTGAGTGCAAGATTAATTGGACCTTATGAGATATTAGAACGTATTGGGCTTGCAGCATACAATTTGGCAATGCCTATGGAACTTTCGAGGATTTGTGATGTGTTTCATGTGCGATGTAGCGTAAGTACGTTTCAGATCCATCTCATATTCTTGAAACACAACCAGTTCATTTGAAAGAGAACTTGTCTTACAAAGAGGAGCGAACACAAATTCTTGATAAGAAATAGTAGGTGCTAAGGAACTAAGTCATACCGTTAGTTAAAGTTCTTTGGGGGAACTATATTTATGAAGAAGCAATATGGGAGACTGAGCAGGCAATGAAGGCTCAATACCCACAGCGTTTCACATCATCACCA

mRNA sequence

ATGTGGAAGAAGACTCGAGTTAACAAAAAAGGGGAGTATGACAACGACAATGTTCAACAAGTCGTCCATAAAATTGATAAGCTGGCCAAATTGTACATTAATAAGATTGTAAGTGCGTATGGAGCTCCCTACCAGATTTCATCCTATGACAGATTGTCAATTAGAAAGAACCGTCAGACCTTGGAAGATATGCTTCAAGCTTGTGATTTTCAGTTCGAAGGTAATTGGGATGTTCATTTGTCATTAATGAAATTTACATATAATAATAGTTTCCATTCAAGTGTTGGAATGGCACCTTATGAGGCTTTGTATGGTAGACGTTGTAGAACCCCCATGTGTTGGGATGAAGTTGGGGAAAGAAAGTCAGAAAATGTGATTAGTAGAAAAAAGTTGAAAACAACACAAGATTGTCAAAAGAGTTATAAAGATAAGCGACGGAGAGACTTGAAATTTGAGGTTGGTGACAAAGTCTTTCTAAAGTTATCTCCTTGGAAGGGTGTGGTTCATTATGGCAGAAAAGACAAGCTGAGTGCAAGATTAATTGGACCTTATGAGATATTAGAACGTATTGGGCTTGCAGCATACAATTTGGCAATGCCTATGGAACTTTCGAGGATTTGTGATGTGTTTCATGTGCGATGTAGCGTAAAAGCAATATGGGAGACTGAGCAGGCAATGAAGGCTCAATACCCACAGCGTTTCACATCATCACCA

Coding sequence (CDS)

ATGTGGAAGAAGACTCGAGTTAACAAAAAAGGGGAGTATGACAACGACAATGTTCAACAAGTCGTCCATAAAATTGATAAGCTGGCCAAATTGTACATTAATAAGATTGTAAGTGCGTATGGAGCTCCCTACCAGATTTCATCCTATGACAGATTGTCAATTAGAAAGAACCGTCAGACCTTGGAAGATATGCTTCAAGCTTGTGATTTTCAGTTCGAAGGTAATTGGGATGTTCATTTGTCATTAATGAAATTTACATATAATAATAGTTTCCATTCAAGTGTTGGAATGGCACCTTATGAGGCTTTGTATGGTAGACGTTGTAGAACCCCCATGTGTTGGGATGAAGTTGGGGAAAGAAAGTCAGAAAATGTGATTAGTAGAAAAAAGTTGAAAACAACACAAGATTGTCAAAAGAGTTATAAAGATAAGCGACGGAGAGACTTGAAATTTGAGGTTGGTGACAAAGTCTTTCTAAAGTTATCTCCTTGGAAGGGTGTGGTTCATTATGGCAGAAAAGACAAGCTGAGTGCAAGATTAATTGGACCTTATGAGATATTAGAACGTATTGGGCTTGCAGCATACAATTTGGCAATGCCTATGGAACTTTCGAGGATTTGTGATGTGTTTCATGTGCGATGTAGCGTAAAAGCAATATGGGAGACTGAGCAGGCAATGAAGGCTCAATACCCACAGCGTTTCACATCATCACCA

Homology

[Close]

BLAST of CSPI03G21590 vs. TrEMBL
Match: A0A061E5E3_THECC (DNA/RNA polymerases superfamily protein OS=Theobroma cacao GN=TCM_009998 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 8.5e-55
Identity = 115/231 (49.78%), Postives = 146/231 (63.20%), Query Frame = 1


Query: 23   HKIDKLAKLYINKIVSAYGAPYQISSYDRLSI---------------------------- 82
            + I++LA+LYI++IV  +G P  I S   L                              
Sbjct: 1210 YSIERLARLYIDEIVRLHGVPVSIVSDRDLRFTSRFWPKFQEALGTKLRFSTAFHPQTDG 1269

Query: 83   --RKNRQTLEDMLQACDFQFEGNWDVHLSLMKFTYNNSFHSSVGMAPYEALYGRRCRTPM 142
               +  QTLEDML+AC   F G+WD HL L++F YNNSF SS+GMAPYEALYGR+CRTP+
Sbjct: 1270 QSERTIQTLEDMLRACVIDFIGSWDRHLPLVEFAYNNSFQSSIGMAPYEALYGRKCRTPL 1329

Query: 143  CWDEVGERKSENV-----------ISRKKLKTTQDCQKSYKDKRRRDLKFEVGDKVFLKL 202
            CWDEVGERK  NV           + R++LKT QD QK+Y DKRR+DL+FEV DKVFLK+
Sbjct: 1330 CWDEVGERKLVNVELIDLTNDKVKVIRERLKTAQDRQKNYSDKRRKDLEFEVDDKVFLKV 1389

Query: 203  SPWKGVVHYGRKDKLSARLIGPYEILERIGLAAYNLAMPMELSRICDVFHV 213
            SPWKGV+ + ++ KL+ R IGP+ I+ERIG  AY L +P EL RI + FHV
Sbjct: 1390 SPWKGVIRFAKRGKLNPRYIGPFHIIERIGPVAYRLELPPELDRIHNAFHV 1440

[Close]

BLAST of CSPI03G21590 vs. TrEMBL
Match: M5VM98_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024392mg PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.1e-54
Identity = 116/226 (51.33%), Postives = 155/226 (68.58%), Query Frame = 1


Query: 25   IDKLAKLYINKIVSAYGAPYQISSY-DRLSI---------RKNRQTLEDMLQACDFQFEG 84
            ++KLAK++I+++V  +G P  I SY D L+           +  QTLEDML+ C  QF G
Sbjct: 1076 LNKLAKIFIDEMVRLHGVPVSIVSYRDPLTAFHPQTDGQSERTIQTLEDMLRMCALQFRG 1135

Query: 85   NWDVHLSLMKFTYNNSFHSSVGMAPYEALYGRRCRTPMCWDEVGERK---SENV------ 144
            +WD  LSLM+F YNNS+  S+GM+P++ALYG++CRTP  WDEVG+ +   SE+V      
Sbjct: 1136 DWDEKLSLMEFAYNNSYQVSIGMSPFDALYGKQCRTPFYWDEVGKHRLEVSEDVELTKKQ 1195

Query: 145  --ISRKKLKTTQDCQKSYKDKRRRDLKFEVGDKVFLKLSPWKGVVHYGRKDKLSARLIGP 204
              I R++LKT QD QKSY D RR+DL+FEV D VFLKLSPWKGVV +G++ KLS R IGP
Sbjct: 1196 VKIIRERLKTAQDRQKSYADNRRKDLQFEVRDWVFLKLSPWKGVVRFGKRGKLSPRYIGP 1255

Query: 205  YEILERIGLAAYNLAMPMELSRICDVFHVRCSVKAIWETEQAMKAQ 230
            YEI+ER+G  AY LA+P +L+R+ DVFHV    K I +    ++ Q
Sbjct: 1256 YEIVERVGPVAYRLALPADLARLHDVFHVSMLRKYISDPSHVLEEQ 1301

[Close]

BLAST of CSPI03G21590 vs. TrEMBL
Match: A0A061GPE8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_038736 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 2.7e-53
Identity = 110/205 (53.66%), Postives = 146/205 (71.22%), Query Frame = 1


Query: 23   HKIDKLAKLYINKIVSAYGAPYQISS--YDRLSIRKNR--QTLEDMLQACDFQFEGNWDV 82
            + I++LA+LYI+++  A G   + S+  + +   +  R  QTLEDML+AC   F G+WD 
Sbjct: 1151 YSIERLARLYIDEM-EALGTKLRFSTAFHPQTDGQSERTIQTLEDMLRACVIDFIGSWDR 1210

Query: 83   HLSLMKFTYNNSFHSSVGMAPYEALYGRRCRTPMCWDEVGERKSENV-----------IS 142
            HL L++F YNNSF SS+GMAPY+ALY R+CRTP+CWDEVGERK  NV           + 
Sbjct: 1211 HLPLVEFAYNNSFQSSIGMAPYDALYRRKCRTPLCWDEVGERKLVNVELIDLTNDKVKVI 1270

Query: 143  RKKLKTTQDCQKSYKDKRRRDLKFEVGDKVFLKLSPWKGVVHYGRKDKLSARLIGPYEIL 202
            R++LKT QD QK+Y DKRR+DL+FEV DKVFLK+SPWKGV+ + ++ KL+ R IGP+ I+
Sbjct: 1271 RERLKTAQDRQKNYSDKRRKDLEFEVEDKVFLKVSPWKGVIRFAKRGKLNPRYIGPFRII 1330

Query: 203  ERIGLAAYNLAMPMELSRICDVFHV 213
            ERIG  AY L +P E  RI +VFHV
Sbjct: 1331 ERIGPVAYRLELPPEFDRIHNVFHV 1354

[Close]

BLAST of CSPI03G21590 vs. TrEMBL
Match: M5VK25_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015000mg PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 2.7e-53
Identity = 113/231 (48.92%), Postives = 149/231 (64.50%), Query Frame = 1


Query: 23   HKIDKLAKLYINKIVSAYGAPYQISS--------------YDRLSIR------------- 82
            + + KLAKL++++IV  +GAP  I S               + +  R             
Sbjct: 1183 YSLTKLAKLFVDEIVRLHGAPVSIVSDRDARFTSRFWKCLQEAMGTRLQFSTAFHPQTDG 1242

Query: 83   ---KNRQTLEDMLQACDFQFEGNWDVHLSLMKFTYNNSFHSSVGMAPYEALYGRRCRTPM 142
               +  QTLEDML++C  Q + +WD HL+L++F YNNS+H+S+ MAPYEALYGR+CRTP+
Sbjct: 1243 QSERTIQTLEDMLRSCVLQMKDSWDTHLALVEFAYNNSYHASIKMAPYEALYGRQCRTPI 1302

Query: 143  CWDEVGERKSENVIS-----------RKKLKTTQDCQKSYKDKRRRDLKFEVGDKVFLKL 202
            CW+EVG++K E V S           ++KLK  QD QKSY D R +DL+F VGD VFLKL
Sbjct: 1303 CWNEVGDKKLEKVDSIQATTEKVKMIKEKLKIAQDRQKSYADNRSKDLEFAVGDWVFLKL 1362

Query: 203  SPWKGVVHYGRKDKLSARLIGPYEILERIGLAAYNLAMPMELSRICDVFHV 213
            SPWKGV+ +G++ KLS R IGPYEI ERIG  AY LA+P ELS++ DVFHV
Sbjct: 1363 SPWKGVMRFGKRGKLSPRYIGPYEITERIGPVAYRLALPAELSQVHDVFHV 1413

[Close]

BLAST of CSPI03G21590 vs. TrEMBL
Match: M5XLP5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb019121mg PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 2.7e-53
Identity = 118/248 (47.58%), Postives = 154/248 (62.10%), Query Frame = 1


Query: 23  HKIDKLAKLYINKIVSAYGAPYQISS------YDRLSIRKNR------------------ 82
           + ++KLAK++I++IV  +G P  I S        R   + N                   
Sbjct: 243 YSLNKLAKIFIDEIVRLHGVPVSIVSDRDPRFTSRFWTKLNEAFGTQLQFSTAFHPQTDG 302

Query: 83  ------QTLEDMLQACDFQFEGNWDVHLSLMKFTYNNSFHSSVGMAPYEALYGRRCRTPM 142
                 QTLEDML+AC  QF G+WD  L LM+F YNNS+  S+GM+P++ALYGR+CRTP 
Sbjct: 303 QSERTIQTLEDMLRACALQFRGDWDEKLPLMEFAYNNSYQVSIGMSPFDALYGRQCRTPF 362

Query: 143 CWDEVGERK---SENV--------ISRKKLKTTQDCQKSYKDKRRRDLKFEVGDKVFLKL 202
            WDEVGE +   SE+V        I R++LKT QD QKSY D RR+DL+FEVGD VFLKL
Sbjct: 363 YWDEVGEHRLVVSEDVKLTKKQVQIIRERLKTAQDRQKSYADNRRKDLQFEVGDWVFLKL 422

Query: 203 SPWKGVVHYGRKDKLSARLIGPYEILERIGLAAYNLAMPMELSRICDVFHVRCSVKAIWE 230
           SPWKGVV +G++ KLS R IGPYEI+ER+G  AY L +P +L+R+ DVFHV    K I +
Sbjct: 423 SPWKGVVRFGKRGKLSPRYIGPYEIIERVGPVAYRLTLPSDLARLHDVFHVSMLRKYISD 482

[Close]

BLAST of CSPI03G21590 vs. NCBI nr
Match: gi|659129924|ref|XP_008464914.1| (PREDICTED: uncharacterized protein LOC103502672 [Cucumis melo])

HSP 1 Score: 257.7 bits (657), Expect = 2.0e-65
Identity = 143/252 (56.75%), Postives = 166/252 (65.87%), Query Frame = 1


Query: 20  QVVHKIDKLAKLYINKIVSAYGAPYQISS------------------------------- 79
           +V   +DKLAKLY++KIVSAYGAP  I S                               
Sbjct: 249 KVTFTLDKLAKLYVDKIVSAYGAPVSIVSDRDSRFTSKFCPSLQQALGTKFHFSTAFHPH 308

Query: 80  YDRLSIRKNRQTLEDMLQACDFQFEGNWDVHLSLMKFTYNNSFHSSVGMAPYEALYGRRC 139
            D LS R   QTLEDML+AC  QF+GNWD HLSLM+F YNNSFHSS+GM PYEALYGRRC
Sbjct: 309 IDCLSER-TIQTLEDMLRACVLQFKGNWDAHLSLMEFAYNNSFHSSIGMTPYEALYGRRC 368

Query: 140 RTPMCWDEVGERK----------SENV-ISRKKLKTTQDCQKSYKDKRRRDLKFEVGDKV 199
           RTP+CWDEVGERK          SENV   R++LKT +D QK Y DK +RDL+FEV DKV
Sbjct: 369 RTPVCWDEVGERKLVGPELVQTTSENVKFIRERLKTVKDRQKRYADKHQRDLEFEVSDKV 428

Query: 200 FLKLSPWKGVVHYGRKDKLSARLIGPYEILERIGLAAYNLAMPMELSRICDVFHVRCSVK 230
           FLKLSPWKGV+ +GRK+KLS + IG YEILE IG AAY+LA PMELS I DVFHV    K
Sbjct: 429 FLKLSPWKGVLRFGRKEKLSPKFIGSYEILECIGYAAYHLASPMELSSINDVFHVSMLRK 488

[Close]

BLAST of CSPI03G21590 vs. NCBI nr
Match: gi|590693615|ref|XP_007044383.1| (DNA/RNA polymerases superfamily protein [Theobroma cacao])

HSP 1 Score: 221.9 bits (564), Expect = 1.2e-54
Identity = 115/231 (49.78%), Postives = 146/231 (63.20%), Query Frame = 1


Query: 23   HKIDKLAKLYINKIVSAYGAPYQISSYDRLSI---------------------------- 82
            + I++LA+LYI++IV  +G P  I S   L                              
Sbjct: 1210 YSIERLARLYIDEIVRLHGVPVSIVSDRDLRFTSRFWPKFQEALGTKLRFSTAFHPQTDG 1269

Query: 83   --RKNRQTLEDMLQACDFQFEGNWDVHLSLMKFTYNNSFHSSVGMAPYEALYGRRCRTPM 142
               +  QTLEDML+AC   F G+WD HL L++F YNNSF SS+GMAPYEALYGR+CRTP+
Sbjct: 1270 QSERTIQTLEDMLRACVIDFIGSWDRHLPLVEFAYNNSFQSSIGMAPYEALYGRKCRTPL 1329

Query: 143  CWDEVGERKSENV-----------ISRKKLKTTQDCQKSYKDKRRRDLKFEVGDKVFLKL 202
            CWDEVGERK  NV           + R++LKT QD QK+Y DKRR+DL+FEV DKVFLK+
Sbjct: 1330 CWDEVGERKLVNVELIDLTNDKVKVIRERLKTAQDRQKNYSDKRRKDLEFEVDDKVFLKV 1389

Query: 203  SPWKGVVHYGRKDKLSARLIGPYEILERIGLAAYNLAMPMELSRICDVFHV 213
            SPWKGV+ + ++ KL+ R IGP+ I+ERIG  AY L +P EL RI + FHV
Sbjct: 1390 SPWKGVIRFAKRGKLNPRYIGPFHIIERIGPVAYRLELPPELDRIHNAFHV 1440

[Close]

BLAST of CSPI03G21590 vs. NCBI nr
Match: gi|595796147|ref|XP_007201110.1| (hypothetical protein PRUPE_ppa024392mg [Prunus persica])

HSP 1 Score: 221.5 bits (563), Expect = 1.6e-54
Identity = 116/226 (51.33%), Postives = 155/226 (68.58%), Query Frame = 1


Query: 25   IDKLAKLYINKIVSAYGAPYQISSY-DRLSI---------RKNRQTLEDMLQACDFQFEG 84
            ++KLAK++I+++V  +G P  I SY D L+           +  QTLEDML+ C  QF G
Sbjct: 1076 LNKLAKIFIDEMVRLHGVPVSIVSYRDPLTAFHPQTDGQSERTIQTLEDMLRMCALQFRG 1135

Query: 85   NWDVHLSLMKFTYNNSFHSSVGMAPYEALYGRRCRTPMCWDEVGERK---SENV------ 144
            +WD  LSLM+F YNNS+  S+GM+P++ALYG++CRTP  WDEVG+ +   SE+V      
Sbjct: 1136 DWDEKLSLMEFAYNNSYQVSIGMSPFDALYGKQCRTPFYWDEVGKHRLEVSEDVELTKKQ 1195

Query: 145  --ISRKKLKTTQDCQKSYKDKRRRDLKFEVGDKVFLKLSPWKGVVHYGRKDKLSARLIGP 204
              I R++LKT QD QKSY D RR+DL+FEV D VFLKLSPWKGVV +G++ KLS R IGP
Sbjct: 1196 VKIIRERLKTAQDRQKSYADNRRKDLQFEVRDWVFLKLSPWKGVVRFGKRGKLSPRYIGP 1255

Query: 205  YEILERIGLAAYNLAMPMELSRICDVFHVRCSVKAIWETEQAMKAQ 230
            YEI+ER+G  AY LA+P +L+R+ DVFHV    K I +    ++ Q
Sbjct: 1256 YEIVERVGPVAYRLALPADLARLHDVFHVSMLRKYISDPSHVLEEQ 1301

[Close]

BLAST of CSPI03G21590 vs. NCBI nr
Match: gi|747077598|ref|XP_011085927.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105167812 [Sesamum indicum])

HSP 1 Score: 221.1 bits (562), Expect = 2.1e-54
Identity = 114/225 (50.67%), Postives = 149/225 (66.22%), Query Frame = 1


Query: 20  QVVHKIDKLAKLYINKIVSAYGAPYQISSY--DRLSIR---------------------- 79
           ++   + KLA LYI++IV  +G P  I S    R + R                      
Sbjct: 695 RITDSLIKLAGLYISEIVRLHGVPISIVSXRDPRFTSRFLESLQRALGTKLHFSTAFHPQ 754

Query: 80  ------KNRQTLEDMLQACDFQFEGNWDVHLSLMKFTYNNSFHSSVGMAPYEALYGRRCR 139
                 +  QTLEDM++AC  +F+GNWD HL LM+F YNNSFHSS+GMAPYEALYGRRCR
Sbjct: 755 TDGQSERTIQTLEDMMRACTMEFKGNWDDHLPLMEFAYNNSFHSSIGMAPYEALYGRRCR 814

Query: 140 TPMCWDEVGERKSENVIS--RKKLKTTQDCQKSYKDKRRRDLKFEVGDKVFLKLSPWKGV 199
           +P+CWD  G R++   +   +K LK  QD QKSY D+ RR++++EVGDKVFLK+SPW+G+
Sbjct: 815 SPICWDIEGLRQTVEKVQVVKKCLKAAQDRQKSYVDQHRREMEYEVGDKVFLKISPWRGI 874

Query: 200 VHYGRKDKLSARLIGPYEILERIGLAAYNLAMPMELSRICDVFHV 213
           + + R++KLS R IGPYEI+ERIG  AY LA+P ELS+I DVFHV
Sbjct: 875 LRFRRQEKLSPRYIGPYEIIERIGPLAYRLALPAELSQIHDVFHV 919

[Close]

BLAST of CSPI03G21590 vs. NCBI nr
Match: gi|590580431|ref|XP_007014066.1| (Uncharacterized protein TCM_038736 [Theobroma cacao])

HSP 1 Score: 216.9 bits (551), Expect = 3.9e-53
Identity = 110/205 (53.66%), Postives = 146/205 (71.22%), Query Frame = 1


Query: 23   HKIDKLAKLYINKIVSAYGAPYQISS--YDRLSIRKNR--QTLEDMLQACDFQFEGNWDV 82
            + I++LA+LYI+++  A G   + S+  + +   +  R  QTLEDML+AC   F G+WD 
Sbjct: 1151 YSIERLARLYIDEM-EALGTKLRFSTAFHPQTDGQSERTIQTLEDMLRACVIDFIGSWDR 1210

Query: 83   HLSLMKFTYNNSFHSSVGMAPYEALYGRRCRTPMCWDEVGERKSENV-----------IS 142
            HL L++F YNNSF SS+GMAPY+ALY R+CRTP+CWDEVGERK  NV           + 
Sbjct: 1211 HLPLVEFAYNNSFQSSIGMAPYDALYRRKCRTPLCWDEVGERKLVNVELIDLTNDKVKVI 1270

Query: 143  RKKLKTTQDCQKSYKDKRRRDLKFEVGDKVFLKLSPWKGVVHYGRKDKLSARLIGPYEIL 202
            R++LKT QD QK+Y DKRR+DL+FEV DKVFLK+SPWKGV+ + ++ KL+ R IGP+ I+
Sbjct: 1271 RERLKTAQDRQKNYSDKRRKDLEFEVEDKVFLKVSPWKGVIRFAKRGKLNPRYIGPFRII 1330

Query: 203  ERIGLAAYNLAMPMELSRICDVFHV 213
            ERIG  AY L +P E  RI +VFHV
Sbjct: 1331 ERIGPVAYRLELPPEFDRIHNVFHV 1354

The following BLAST results are available for this feature:

BLAST of CSPI03G21590 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI03G21590 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A061E5E3_THECC	8.5e-55	49.78	DNA/RNA polymerases superfamily protein OS=Theobroma cacao GN=TCM_009998 PE=4 SV...	[more]
M5VM98_PRUPE	1.1e-54	51.33	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024392mg PE=4 SV=1	[more]
A0A061GPE8_THECC	2.7e-53	53.66	Uncharacterized protein OS=Theobroma cacao GN=TCM_038736 PE=4 SV=1	[more]
M5VK25_PRUPE	2.7e-53	48.92	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015000mg PE=4 SV=1	[more]
M5XLP5_PRUPE	2.7e-53	47.58	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb019121mg PE=4 SV=1	[more]

BLAST of CSPI03G21590 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CSPI03G21590 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659129924\|ref\|XP_008464914.1\|	2.0e-65	56.75	PREDICTED: uncharacterized protein LOC103502672 [Cucumis melo]	[more]
gi\|590693615\|ref\|XP_007044383.1\|	1.2e-54	49.78	DNA/RNA polymerases superfamily protein [Theobroma cacao]	[more]
gi\|595796147\|ref\|XP_007201110.1\|	1.6e-54	51.33	hypothetical protein PRUPE_ppa024392mg [Prunus persica]	[more]
gi\|747077598\|ref\|XP_011085927.1\|	2.1e-54	50.67	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105167812 [Sesamum in...	[more]
gi\|590580431\|ref\|XP_007014066.1\|	3.9e-53	53.66	Uncharacterized protein TCM_038736 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR012337	RNaseH-like_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G21590.1	CSPI03G21590.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012337	Ribonuclease H-like domain	GENE3D	G3DSA:3.30.420.10		coord: 51..112 score: 1.
IPR012337	Ribonuclease H-like domain	unknown	SSF53098	Ribonuclease H-like	coord: 56..113 score: 1.7
None	No IPR available	PANTHER	PTHR24559	FAMILY NOT NAMED	coord: 26..212 score: 1.9
None	No IPR available	PANTHER	PTHR24559:SF207	SUBFAMILY NOT NAMED	coord: 26..212 score: 1.9

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI03G21590	Cucumber (Gy14) v1	cgycpiB554
CSPI03G21590	Cucurbita maxima (Rimu)	cmacpiB244
CSPI03G21590	Cucurbita maxima (Rimu)	cmacpiB458
CSPI03G21590	Cucurbita moschata (Rifu)	cmocpiB232
CSPI03G21590	Cucurbita moschata (Rifu)	cmocpiB446
CSPI03G21590	Cucumber (Chinese Long) v2	cpicuB120
CSPI03G21590	Melon (DHL92) v3.5.1	cpimeB243
CSPI03G21590	Watermelon (Charleston Gray)	cpiwcgB240
CSPI03G21590	Watermelon (97103) v1	cpiwmB245
CSPI03G21590	Cucurbita pepo (Zucchini)	cpecpiB552
CSPI03G21590	Cucurbita pepo (Zucchini)	cpecpiB602
CSPI03G21590	Bottle gourd (USVL1VR-Ls)	cpilsiB210
CSPI03G21590	Melon (DHL92) v3.6.1	cpimedB240
CSPI03G21590	Cucumber (Gy14) v2	cgybcpiB110
CSPI03G21590	Silver-seed gourd	carcpiB0798
CSPI03G21590	Cucumber (Chinese Long) v3	cpicucB144
CSPI03G21590	Watermelon (97103) v2	cpiwmbB224