CSPI03G21340 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI03G21340
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	Chr3 : 17572464 .. 17573128 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAATCAAAAGCAAAGTTCTACCTGACTTGTCTAAACTGGAGCCACTCGACGGAACAAACTACCGCCGCTGGTCCCAGAAGTTATCGATCTTTTTCGAACAACTTGAAGTCGATTATGTTCTCATCGTCAAACCGCCAATCGATCCTCTAGCACCACCAATCAATCTTCCAGCACCTTCTGATCCAAAATCTTCCACGGGATCCATTGTCGTCACTACTGACCAGGTAAAGGAAGCATCTACAATTGATCCCAAGAAGTACAAGAAGGACAACAAGATTGTTCGTGGGCATCTGTTGAACCATATGTTGGATCCCGTGTTTGACTTATTTGTAATCCAAAAATCTGTCAAGACATCTGGTGCATTATGGAGTCTCGCTATGGTGAAGACGACGCAGAGAGAAAGAAGTACGTTGTGGAAAAATGGCTGCAATTTCAAATGATAGATGATAAGCCAATTGTGGAGCAGATACATGAGTATGAAAACCTTGTGGCCAATGTCCTATCTGAAGGTATGAAGATGTGTAAGATACTTCAAGCAAATGTTTTACTGGAAAAATTTTCACCCTCTTGGACCGACTACCAAAATTACTTGAAGCACAAGAAGAAAGATCTGAAACTCCAAGATCTTATAAGCCACATGCGTACAGAAGAGGCCAACTGA

mRNA sequence

ATGTCAATCAAAAGCAAAGTTCTACCTGACTTGTCTAAACTGGAGCCACTCGACGGAACAAACTACCGCCGCTGGTCCCAGAAGTTATCGATCTTTTTCGAACAACTTGAAGTCGATTATGTTCTCATCGTCAAACCGCCAATCGATCCTCTAGCACCACCAATCAATCTTCCAGCACCTTCTGATCCAAAATCTTCCACGGGATCCATTGTCGTCACTACTGACCAGGTAAAGGAAGCATCTACAATTGATCCCAAGAAGTACAAGAAGGACAACAAGATTGTTCGTGGGCATCTGTTGAACCATATGTTGGATCCCTCTCGCTATGGTGAAGACGACGCAGAGAGAAAGAAGTACGTTGTGGAAAAATGGCTGCAATTTCAAATGATAGATGATAAGCCAATTGTGGAGCAGATACATGAGTATGAAAACCTTGTGGCCAATGTCCTATCTGAAGGTATGAAGATGTGTAAGATACTTCAAGCAAATGTTTTACTGGAAAAATTTTCACCCTCTTGGACCGACTACCAAAATTACTTGAAGCACAAGAAGAAAGATCTGAAACTCCAAGATCTTATAAGCCACATGCGTACAGAAGAGGCCAACTGA

Coding sequence (CDS)

ATGTCAATCAAAAGCAAAGTTCTACCTGACTTGTCTAAACTGGAGCCACTCGACGGAACAAACTACCGCCGCTGGTCCCAGAAGTTATCGATCTTTTTCGAACAACTTGAAGTCGATTATGTTCTCATCGTCAAACCGCCAATCGATCCTCTAGCACCACCAATCAATCTTCCAGCACCTTCTGATCCAAAATCTTCCACGGGATCCATTGTCGTCACTACTGACCAGGTAAAGGAAGCATCTACAATTGATCCCAAGAAGTACAAGAAGGACAACAAGATTGTTCGTGGGCATCTGTTGAACCATATGTTGGATCCCTCTCGCTATGGTGAAGACGACGCAGAGAGAAAGAAGTACGTTGTGGAAAAATGGCTGCAATTTCAAATGATAGATGATAAGCCAATTGTGGAGCAGATACATGAGTATGAAAACCTTGTGGCCAATGTCCTATCTGAAGGTATGAAGATGTGTAAGATACTTCAAGCAAATGTTTTACTGGAAAAATTTTCACCCTCTTGGACCGACTACCAAAATTACTTGAAGCACAAGAAGAAAGATCTGAAACTCCAAGATCTTATAAGCCACATGCGTACAGAAGAGGCCAACTGA

Homology

[Close]

BLAST of CSPI03G21340 vs. TrEMBL
Match: E5GBG5_CUCME (Ty1-copia retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 1.2e-76
Identity = 157/225 (69.78%), Postives = 169/225 (75.11%), Query Frame = 1


Query: 1   MSIKS--KVLPDLSKLEPLDGTNYRRWSQKLSIFFEQLEVDYVLIVKPPIDPLAPPINLP 60
           MSIK+  K+LPDLSKLEPLDGTNYRRWSQKL IFF+QLEVDYVL    P     PP    
Sbjct: 1   MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFKQLEVDYVLTTDLPTSD--PPTTTS 60

Query: 61  APSDPKSSTGSI--VVTTDQVKEASTIDPKKYKKDNKIVRGHLLNHMLDP---------- 120
             SDP+SSTG +  V  TDQVK+   IDP+KY KDNK VRGHLLNHM DP          
Sbjct: 61  TSSDPESSTGPLTAVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKS 120

Query: 121 ---------SRYGEDDAERKKYVVEKWLQFQMIDDKPIVEQIHEYENLVANVLSEGMKMC 180
                    SRYG DDA RKKYVV KWLQFQM DDKP+VEQIHEYENLV NVLSEGMKMC
Sbjct: 121 AKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVTNVLSEGMKMC 180

Query: 181 KILQANVLLEKFSPSWTDYQNYLKHKKKDLKLQDLISHMRTEEAN 203
           +ILQANVLLEKF PSW DY+N+LKHKKKDLKL +LISHMRTEEAN
Sbjct: 181 EILQANVLLEKFPPSWNDYRNHLKHKKKDLKLHELISHMRTEEAN 223

[Close]

BLAST of CSPI03G21340 vs. TrEMBL
Match: A0A0S3RG96_PHAAN (Uncharacterized protein (Fragment) OS=Vigna angularis var. angularis GN=Vigan.02G242200 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.1e-18
Identity = 59/207 (28.50%), Postives = 100/207 (48.31%), Query Frame = 1


Query: 13  KLEPLDGTNYRRWSQKLSIFFEQLEVDYVLIVKPPIDPLAPPINLPAPSDPKSSTGSIVV 72
           KL+  +G  +RRW +K+      L + YVL             + P P + K+ T     
Sbjct: 13  KLDKFEGVGFRRWQKKMHFLLSALNMAYVL-------------SSPQPKERKNET----- 72

Query: 73  TTDQVKEASTIDPKKYKKDNKIVRGHLLNHMLDP-------------------SRYGEDD 132
             +Q K        K++ D+ + RGH+LN M DP                   S+Y  +D
Sbjct: 73  LEEQRKR------NKWENDDYVCRGHILNGMSDPLFDIYQYVDSAKELWDQLESKYISED 132

Query: 133 AERKKYVVEKWLQFQMIDDKPIVEQIHEYENLVANVLSEGMKMCKILQANVLLEKFSPSW 192
           A  KK++V  +  ++MID +PI+EQ HE + ++ +     + M +    + +++K  P+W
Sbjct: 133 ASSKKFLVSNFNNYKMIDARPIMEQFHEIQRILGSFKQHNIAMDETFIVSSIIDKLPPNW 192

Query: 193 TDYQNYLKHKKKDLKLQDLISHMRTEE 201
            D +N LKH K D+ ++ L +H+R EE
Sbjct: 193 KDVRNSLKHNKDDMNVEQLAAHLRIEE 195

[Close]

BLAST of CSPI03G21340 vs. TrEMBL
Match: A0A0S3SC24_PHAAN (Uncharacterized protein (Fragment) OS=Vigna angularis var. angularis GN=Vigan.06G161800 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.4e-18
Identity = 58/207 (28.02%), Postives = 100/207 (48.31%), Query Frame = 1


Query: 13  KLEPLDGTNYRRWSQKLSIFFEQLEVDYVLIVKPPIDPLAPPINLPAPSDPKSSTGSIVV 72
           KL+  +G  +RRW +K+      L + YVL             + P P + ++ T     
Sbjct: 13  KLDKFEGVGFRRWQKKMHFLLSALNMAYVL-------------SSPQPKESENET----- 72

Query: 73  TTDQVKEASTIDPKKYKKDNKIVRGHLLNHMLDP-------------------SRYGEDD 132
             +Q K        K++ D+ + RGH+LN M DP                   S+Y  +D
Sbjct: 73  LEEQRKR------NKWENDDYVCRGHILNGMSDPLFDIYQYVDSAKELWDQLESKYISED 132

Query: 133 AERKKYVVEKWLQFQMIDDKPIVEQIHEYENLVANVLSEGMKMCKILQANVLLEKFSPSW 192
           A  KK++V  +  ++MID +PI+EQ HE + ++ +     + M +    + +++K  P+W
Sbjct: 133 ASSKKFLVSNFNNYKMIDARPIMEQFHEIQRILGSFKQHNIAMDETFIVSSIIDKLPPNW 192

Query: 193 TDYQNYLKHKKKDLKLQDLISHMRTEE 201
            D +N LKH K D+ ++ L +H+R EE
Sbjct: 193 KDVRNSLKHNKDDMNVEQLAAHLRIEE 195

[Close]

BLAST of CSPI03G21340 vs. TrEMBL
Match: V4LT18_EUTSA (Uncharacterized protein (Fragment) OS=Eutrema salsugineum GN=EUTSA_v10010962mg PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 4.2e-18
Identity = 58/197 (29.44%), Postives = 101/197 (51.27%), Query Frame = 1


Query: 13  KLEPLDGTNYRRWSQKLSIFFEQLEVDYVLIVKPPIDPLAPPINLPAPSDPKSSTGSIVV 72
           KLE  +G ++R+W +K+      L V YVL             ++P P+ P+ +    + 
Sbjct: 7   KLEKFEGIDFRKWQKKMHFLLTTLNVAYVL-------------SMPMPTVPEDAENESL- 66

Query: 73  TTDQVKEASTIDPKKYKKDNKIVRGHLLNH------MLDP--SRYGEDDAERKKYVVEKW 132
                    T+   K++ D+ I R H+LN       + D   S+Y  +DA  KK +V  +
Sbjct: 67  -------EETMKQLKWENDDYICRDHILNECRVRKELWDALESKYMAEDASSKKSLVSNF 126

Query: 133 LQFQMIDDKPIVEQIHEYENLVANVLSEGMKMCKILQANVLLEKFSPSWTDYQNYLKHKK 192
             ++M D +P++EQ +E   ++       MKM + +  + +++K  PSW D+++ LKHKK
Sbjct: 127 NNYKMSDSRPVMEQYNELLRILGQFTQHNMKMDESISVSSIIDKLPPSWKDFKHMLKHKK 182

Query: 193 KDLKLQDLISHMRTEEA 202
           ++L L  L SH+R EE+
Sbjct: 187 EELSLVQLGSHLRIEES 182

[Close]

BLAST of CSPI03G21340 vs. TrEMBL
Match: A0A151TB57_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=KK1_018882 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.2e-17
Identity = 61/217 (28.11%), Postives = 105/217 (48.39%), Query Frame = 1


Query: 5   SKVLPDLSKLEPLDGTNYRRWSQKLSIFFEQLEVDYVLIVKPPIDPLAPPINLPAPSDPK 64
           +K LPD+SK+E   G N+RRW +++    +   V Y L V  P                 
Sbjct: 23  AKTLPDVSKIEVFAGQNFRRWQERIHSILDMHGVAYALTVPKP----------------D 82

Query: 65  SSTGSIVVTTDQVKEASTIDPKKYKKDNKIVRGHLL----NHMLDP-------------- 124
           SST +    +D   +A           NK+ R  +L    N + D               
Sbjct: 83  SSTSASASKSDDWSQA-----------NKVCRHTILSALSNDLFDVYCSYKEAKDIWDSM 142

Query: 125 -SRYGEDDAERKKYVVEKWLQFQMIDDKPIVEQIHEYENLVANVLSEGMKMCKILQANVL 184
             +Y  +D+ R+++++  + +++M ++K I  QI+EY  L+ ++ SE + +     + +L
Sbjct: 143 IMKYTAEDSVRQRFIIGNYYRWEMTEEKDIKVQINEYHKLLEDLKSENLSLPDEFVSELL 202

Query: 185 LEKFSPSWTDYQNYLKHKKKDLKLQDLISHMRTEEAN 203
           +EK   SWTDY+ +LKH+ K + L DLI+H+  E+AN
Sbjct: 203 IEKLPESWTDYKQHLKHRHKQMSLSDLITHIIIEDAN 212

[Close]

BLAST of CSPI03G21340 vs. TAIR10
Match: AT4G00980.1 (AT4G00980.1 zinc knuckle (CCHC-type) family protein)

HSP 1 Score: 75.1 bits (183), Expect = 5.6e-14
Identity = 50/210 (23.81%), Postives = 101/210 (48.10%), Query Frame = 1


Query: 13  KLEPLDGTNYRRWSQKLSIFFEQLEVDYVLIVKPPIDPLAPPINLPAPSDPKSSTGSIVV 72
           K+   DG +Y  W+ ++ +F +QL++ YVL                  S+P  S GS   
Sbjct: 194 KISRFDGKSYLYWASQMELFLKQLKLTYVL------------------SEPCPSIGSSQG 253

Query: 73  TTDQVKEASTIDP--KKYKKDNKIVRGHLLNHMLDP--SRYGE----------------- 132
                +E +  D   KK+ +D+ +   HL+N + D    RY +                 
Sbjct: 254 PETNPREITRADATGKKWLRDDYLCYTHLMNSLSDHLYRRYSQKFKHAKELWDELKWVYQ 313

Query: 133 -DDAERKKYVVEKWLQFQMIDDKPIVEQIHEYENLVANVLSEGMKMCKILQANVLLEKFS 192
            D+++ K+  V K+++F+M++++PI+EQ+  +  +  +++S GM + +    + ++ KF 
Sbjct: 314 CDESKSKRSQVRKYIEFRMVEERPILEQVQVFNKIADSIVSAGMFLDEAFHVSTIISKFP 373

Query: 193 PSWTDYQNYLKHKKKDLKLQDLISHMRTEE 201
           PSW  +   L  +++ L +  L+  ++ EE
Sbjct: 374 PSWRGFCTRLM-EEEYLPVWMLMERVKAEE 384

[Close]

BLAST of CSPI03G21340 vs. NCBI nr
Match: gi|307135946|gb|ADN33807.1| (ty1-copia retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 294.3 bits (752), Expect = 1.7e-76
Identity = 157/225 (69.78%), Postives = 169/225 (75.11%), Query Frame = 1


Query: 1   MSIKS--KVLPDLSKLEPLDGTNYRRWSQKLSIFFEQLEVDYVLIVKPPIDPLAPPINLP 60
           MSIK+  K+LPDLSKLEPLDGTNYRRWSQKL IFF+QLEVDYVL    P     PP    
Sbjct: 1   MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFKQLEVDYVLTTDLPTSD--PPTTTS 60

Query: 61  APSDPKSSTGSI--VVTTDQVKEASTIDPKKYKKDNKIVRGHLLNHMLDP---------- 120
             SDP+SSTG +  V  TDQVK+   IDP+KY KDNK VRGHLLNHM DP          
Sbjct: 61  TSSDPESSTGPLTAVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKS 120

Query: 121 ---------SRYGEDDAERKKYVVEKWLQFQMIDDKPIVEQIHEYENLVANVLSEGMKMC 180
                    SRYG DDA RKKYVV KWLQFQM DDKP+VEQIHEYENLV NVLSEGMKMC
Sbjct: 121 AKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVTNVLSEGMKMC 180

Query: 181 KILQANVLLEKFSPSWTDYQNYLKHKKKDLKLQDLISHMRTEEAN 203
           +ILQANVLLEKF PSW DY+N+LKHKKKDLKL +LISHMRTEEAN
Sbjct: 181 EILQANVLLEKFPPSWNDYRNHLKHKKKDLKLHELISHMRTEEAN 223

[Close]

BLAST of CSPI03G21340 vs. NCBI nr
Match: gi|659113205|ref|XP_008456453.1| (PREDICTED: uncharacterized protein LOC103496396 [Cucumis melo])

HSP 1 Score: 292.4 bits (747), Expect = 6.3e-76
Identity = 157/225 (69.78%), Postives = 169/225 (75.11%), Query Frame = 1


Query: 1   MSIKS--KVLPDLSKLEPLDGTNYRRWSQKLSIFFEQLEVDYVLIVKPPIDPLAPPINLP 60
           MSIK+  K+LPDLSKLEPLDGTNYRRWSQKL IFFEQLEVDYVL    P     PP    
Sbjct: 1   MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPSSD--PPTTTS 60

Query: 61  APSDPKSSTGSI--VVTTDQVKEASTIDPKKYKKDNKIVRGHLLNHMLDP---------- 120
             S+P+SSTG +  V  TDQVK+   IDP+KY KDNK VRGHLLNHM DP          
Sbjct: 61  TSSNPESSTGPLTTVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKS 120

Query: 121 ---------SRYGEDDAERKKYVVEKWLQFQMIDDKPIVEQIHEYENLVANVLSEGMKMC 180
                    SRYG DDA RKKYVV KWLQFQM DDKP+VEQIHEYENLVANVLSE MKMC
Sbjct: 121 AKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEDMKMC 180

Query: 181 KILQANVLLEKFSPSWTDYQNYLKHKKKDLKLQDLISHMRTEEAN 203
           +ILQANVLLE F PSW DY+N+LKHKKKDLKLQ+LISHMRTEEAN
Sbjct: 181 EILQANVLLENFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEAN 223

[Close]

BLAST of CSPI03G21340 vs. NCBI nr
Match: gi|659102488|ref|XP_008452160.1| (PREDICTED: uncharacterized protein LOC103493265 [Cucumis melo])

HSP 1 Score: 286.6 bits (732), Expect = 3.5e-74
Identity = 155/225 (68.89%), Postives = 168/225 (74.67%), Query Frame = 1


Query: 1   MSIKS--KVLPDLSKLEPLDGTNYRRWSQKLSIFFEQLEVDYVLIVKPPIDPLAPPINLP 60
           MSIK+  K+LPDLSKLEPLDGTNYRRWSQKL IFFEQL+VDYVL    P     PP    
Sbjct: 1   MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLQVDYVLTTDLPSSD--PPTTTS 60

Query: 61  APSDPKSSTG--SIVVTTDQVKEASTIDPKKYKKDNKIVRGHLLNHMLDP---------- 120
             SDP+SSTG  + V  TDQVK+   IDP+KY KDNK VRGHLLNHM DP          
Sbjct: 61  TSSDPESSTGPPTTVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFNLFVVQKF 120

Query: 121 ---------SRYGEDDAERKKYVVEKWLQFQMIDDKPIVEQIHEYENLVANVLSEGMKMC 180
                    S+YG DDA RKKYVV KWLQFQM DDKP+VEQIHEYENLVANV+SEGMKM 
Sbjct: 121 TKDIWSTLESQYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVMSEGMKMY 180

Query: 181 KILQANVLLEKFSPSWTDYQNYLKHKKKDLKLQDLISHMRTEEAN 203
           +ILQANVLLEKF PSW DY N+LKHKKKDLKLQ+LISHM TEEAN
Sbjct: 181 EILQANVLLEKFPPSWNDYCNHLKHKKKDLKLQELISHMGTEEAN 223

[Close]

BLAST of CSPI03G21340 vs. NCBI nr
Match: gi|659126166|ref|XP_008463045.1| (PREDICTED: uncharacterized protein LOC103501285 [Cucumis melo])

HSP 1 Score: 275.4 bits (703), Expect = 8.0e-71
Identity = 148/212 (69.81%), Postives = 158/212 (74.53%), Query Frame = 1


Query: 1   MSIKS--KVLPDLSKLEPLDGTNYRRWSQKLSIFFEQLEVDYVLIVKPPIDPLAPPINLP 60
           MSIK+  K+LPDLSKLEPLDGTNYRRWSQKL IFFEQLEVDYVL    P     PP    
Sbjct: 1   MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPT--FDPPTTTS 60

Query: 61  APSDPKSSTGSI--VVTTDQVKEASTIDPKKYKKDNKIVRGHLLNHMLDP---------- 120
             SDP+SSTG +  V  TDQVK+   IDP+KY KDNK VRGHLLNHM DP          
Sbjct: 61  TSSDPESSTGPLTTVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFAVQKS 120

Query: 121 ---------SRYGEDDAERKKYVVEKWLQFQMIDDKPIVEQIHEYENLVANVLSEGMKMC 180
                    SRYG DDA RKKYVV KWLQFQM DDKPIVEQIHEYENLVANVLSEGMKMC
Sbjct: 121 AKEIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPIVEQIHEYENLVANVLSEGMKMC 180

Query: 181 KILQANVLLEKFSPSWTDYQNYLKHKKKDLKL 190
           KIL+AN+LLEKF PSW DY+N+LKHKKKDLKL
Sbjct: 181 KILEANILLEKFPPSWNDYRNHLKHKKKDLKL 210

[Close]

BLAST of CSPI03G21340 vs. NCBI nr
Match: gi|698485788|ref|XP_009789656.1| (PREDICTED: uncharacterized protein LOC104237252 [Nicotiana sylvestris])

HSP 1 Score: 253.4 bits (646), Expect = 3.2e-64
Identity = 129/217 (59.45%), Postives = 156/217 (71.89%), Query Frame = 1


Query: 5   SKVLPDLSKLEPLDGTNYRRWSQKLSIFFEQLEVDYVLIVKPPIDPLAPPINLPAPSDPK 64
           +K LPDLSKLEPLDG NY+RWSQKL IFFEQLEVDY+L   PP D +             
Sbjct: 6   NKTLPDLSKLEPLDGNNYKRWSQKLLIFFEQLEVDYILFNDPPTDIVTD----------N 65

Query: 65  SSTGSIVVTTDQVKEASTIDPKKYKKDNKIVRGHLLNHMLDP------------------ 124
           S++ +I+V  D  K       KK++KDNKIVRGHLLNHM +P                  
Sbjct: 66  SNSANIIVDDDATK-------KKFEKDNKIVRGHLLNHMTNPLFDLFINYKSAKVIWDSL 125

Query: 125 -SRYGEDDAERKKYVVEKWLQFQMIDDKPIVEQIHEYENLVANVLSEGMKMCKILQANVL 184
             +YG DDA +KKYV+EKW++FQM+DDKPI+EQ+HEYENL A+VL+E M+MC+ILQANVL
Sbjct: 126 EKKYGRDDAGKKKYVIEKWIKFQMVDDKPIMEQVHEYENLTADVLNESMEMCEILQANVL 185

Query: 185 LEKFSPSWTDYQNYLKHKKKDLKLQDLISHMRTEEAN 203
           LEKF PSW+DY+N LKHKKK+L LQ+LISHMRTEEAN
Sbjct: 186 LEKFPPSWSDYRNQLKHKKKNLTLQELISHMRTEEAN 205

The following BLAST results are available for this feature:

BLAST of CSPI03G21340 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI03G21340 vs. TrEMBL


Match Name	E-value	Identity	Description
E5GBG5_CUCME	1.2e-76	69.78	Ty1-copia retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A0S3RG96_PHAAN	1.1e-18	28.50	Uncharacterized protein (Fragment) OS=Vigna angularis var. angularis GN=Vigan.02...	[more]
A0A0S3SC24_PHAAN	2.4e-18	28.02	Uncharacterized protein (Fragment) OS=Vigna angularis var. angularis GN=Vigan.06...	[more]
V4LT18_EUTSA	4.2e-18	29.44	Uncharacterized protein (Fragment) OS=Eutrema salsugineum GN=EUTSA_v10010962mg P...	[more]
A0A151TB57_CAJCA	1.2e-17	28.11	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=...	[more]

BLAST of CSPI03G21340 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G00980.1	5.6e-14	23.81	zinc knuckle (CCHC-type) family protein	[more]

BLAST of CSPI03G21340 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|307135946\|gb\|ADN33807.1\|	1.7e-76	69.78	ty1-copia retrotransposon protein [Cucumis melo subsp. melo]	[more]
gi\|659113205\|ref\|XP_008456453.1\|	6.3e-76	69.78	PREDICTED: uncharacterized protein LOC103496396 [Cucumis melo]	[more]
gi\|659102488\|ref\|XP_008452160.1\|	3.5e-74	68.89	PREDICTED: uncharacterized protein LOC103493265 [Cucumis melo]	[more]
gi\|659126166\|ref\|XP_008463045.1\|	8.0e-71	69.81	PREDICTED: uncharacterized protein LOC103501285 [Cucumis melo]	[more]
gi\|698485788\|ref\|XP_009789656.1\|	3.2e-64	59.45	PREDICTED: uncharacterized protein LOC104237252 [Nicotiana sylvestris]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005488	binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G21340.1	CSPI03G21340.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 108..201 score: 2.

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI03G21340	Silver-seed gourd	carcpiB0545
CSPI03G21340	Silver-seed gourd	carcpiB0798
CSPI03G21340	Cucumber (Chinese Long) v3	cpicucB144
CSPI03G21340	Watermelon (97103) v2	cpiwmbB224
CSPI03G21340	Wax gourd	cpiwgoB271
CSPI03G21340	Cucumber (Gy14) v1	cgycpiB554
CSPI03G21340	Cucurbita maxima (Rimu)	cmacpiB244
CSPI03G21340	Cucurbita maxima (Rimu)	cmacpiB458
CSPI03G21340	Cucurbita moschata (Rifu)	cmocpiB232
CSPI03G21340	Cucurbita moschata (Rifu)	cmocpiB446
CSPI03G21340	Cucumber (Chinese Long) v2	cpicuB120
CSPI03G21340	Melon (DHL92) v3.5.1	cpimeB243
CSPI03G21340	Watermelon (Charleston Gray)	cpiwcgB240
CSPI03G21340	Watermelon (97103) v1	cpiwmB245
CSPI03G21340	Cucurbita pepo (Zucchini)	cpecpiB552
CSPI03G21340	Cucurbita pepo (Zucchini)	cpecpiB602
CSPI03G21340	Bottle gourd (USVL1VR-Ls)	cpilsiB210
CSPI03G21340	Melon (DHL92) v3.6.1	cpimedB240
CSPI03G21340	Cucumber (Gy14) v2	cgybcpiB110