CSPI03G21120 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G21120
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr3 : 17181260 .. 17181963 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAAAATTAGTAAGGCATTATAAATTAAGGTGACAGATGACCAAACGCAGATGCCCATATTTCTAGTCTTCCTCCTTTCCCATAAAACCCAATCGCATTTGTCCGCCGTAAAAGGAATCAAGGACGGGAATGGGTGCGTCGGCGCTGATGATACCGGCCACCGTAGTGACGATGATTCTGCTGCTCCATATTCCAAGTAGTTGCGATGCTCTTACCACTTTCCAACCACTTCTCAGCAACCACAGTTCATGTAAGTTTTGAAAAAGTTTAGATATGGGAAGTAGAGTAGACTAGAATTTTTTTATATATTTTGATAATTGTTGATTTTGGAGCGGTTTGACGCACGCAGATGGTGGAAAATTGATGATGGGAGAAGAAGATATGGAGTTGGAATTTCTAATGGAATCACACATAAGCCGGATTCTAGCGTCATCTAAAAACTACCAAACCGCCTCCACTACAAACGCTAACAAAGCTTCTGGGGGCGGTTGTGACCGACCACCGCGCTACGACAGTTGTCTCGGCAAGAAAAGAAATAATCCCCCGCCTCCAAACTGTAGCACCTACAATCGAGCAAATCCCTGTTAGAAAATTTTAATTCACACCTTCTCTATTATTCACTTCTTTTCTTTTCTTCTTATAACTATATAATTTCTCACTCAAATCTTTACCCTTAATAATGCAAAATATTGTACTCTTCCTCAA

mRNA sequence

ATGGGTGCGTCGGCGCTGATGATACCGGCCACCGTAGTGACGATGATTCTGCTGCTCCATATTCCAAGTAGTTGCGATGCTCTTACCACTTTCCAACCACTTCTCAGCAACCACAGTTCATATGGTGGAAAATTGATGATGGGAGAAGAAGATATGGAGTTGGAATTTCTAATGGAATCACACATAAGCCGGATTCTAGCGTCATCTAAAAACTACCAAACCGCCTCCACTACAAACGCTAACAAAGCTTCTGGGGGCGGTTGTGACCGACCACCGCGCTACGACAGTTGTCTCGGCAAGAAAAGAAATAATCCCCCGCCTCCAAACTGTAGCACCTACAATCGAGCAAATCCCTGTTAG

Coding sequence (CDS)

ATGGGTGCGTCGGCGCTGATGATACCGGCCACCGTAGTGACGATGATTCTGCTGCTCCATATTCCAAGTAGTTGCGATGCTCTTACCACTTTCCAACCACTTCTCAGCAACCACAGTTCATATGGTGGAAAATTGATGATGGGAGAAGAAGATATGGAGTTGGAATTTCTAATGGAATCACACATAAGCCGGATTCTAGCGTCATCTAAAAACTACCAAACCGCCTCCACTACAAACGCTAACAAAGCTTCTGGGGGCGGTTGTGACCGACCACCGCGCTACGACAGTTGTCTCGGCAAGAAAAGAAATAATCCCCCGCCTCCAAACTGTAGCACCTACAATCGAGCAAATCCCTGTTAG
Homology
[Close]
BLAST of CSPI03G21120 vs. TrEMBL
Match: A0A0A0LCJ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G298580 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 6.4e-59
Identity = 117/119 (98.32%), Postives = 117/119 (98.32%), Query Frame = 1 

Query: 1   MGASALMIPATVVTMILLLHIPSSCDALTTFQPLLSNHSSYGGKLMMGEEDMELEFLMES 60
           MGASALMIPA VVTMILLLHIPSSCDALTTFQPLLSNHSSYGGKLMMGEEDMELEFLMES
Sbjct: 1   MGASALMIPAAVVTMILLLHIPSSCDALTTFQPLLSNHSSYGGKLMMGEEDMELEFLMES 60

Query: 61  HISRILASSKNYQTASTTNANKASGGGCDRPPRYDSCLGKKRNNPPPPNCSTYNRANPC 120
           HISRILASSKNYQTASTTNANKASGGGCDRPPRYDSCLGKKRNNPPPPNCS YNRANPC
Sbjct: 61  HISRILASSKNYQTASTTNANKASGGGCDRPPRYDSCLGKKRNNPPPPNCSPYNRANPC 119

[Close]
BLAST of CSPI03G21120 vs. TrEMBL
Match: A0A0A0L711_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G298570 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 7.6e-28
Identity = 71/119 (59.66%), Postives = 94/119 (78.99%), Query Frame = 1 

Query: 3   ASALMIPATVVTMILLLHIPSSC-DALTTFQPLLSNHSSYG-GKLMMGEEDMELEFLMES 62
           A ALMIPA +  M+++L IP++C  ALT+F+P L+NH+S G  K M+ EED++  F+MES
Sbjct: 4   APALMIPAAMAMMLMML-IPTACGGALTSFKP-LNNHTSGGLVKYMVEEEDIKSNFVMES 63

Query: 63  HISRILASSKNYQTASTTNANKASGGGCDRPPRYDSCLGKKRNNPPPPNCSTYNRANPC 120
           HISR+LA S++++T+ST NA + S G CDRPPRYDSCLG KRN PPP NCST+NR +PC
Sbjct: 64  HISRMLADSQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNREHPC 120

[Close]
BLAST of CSPI03G21120 vs. TrEMBL
Match: A0A0A0L9X5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G298070 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 3.8e-19
Identity = 61/119 (51.26%), Postives = 79/119 (66.39%), Query Frame = 1 

Query: 1   MGASALMIPATVVTMILLLHIPSSCDALTTFQPLLSNHSSYGGKLMMGEEDMELEFLMES 60
           M A+ L I  T+  + LLL +   CDA    +P+  N SS  GK ++G  D++ +FLMES
Sbjct: 1   MAAATLSIRTTLAIVTLLL-VAVGCDAFIASKPVF-NLSSDLGKRLIG--DIDTDFLMES 60

Query: 61  HISRILASSKNYQTASTTNANKASGGGCDRPPRYDSCLGKKRNNPPPPNCSTYNRANPC 120
           H+SRILA  + ++T  T NAN AS   C+RPPRYDSCLG+ R+NPP  NC  YNRANPC
Sbjct: 61  HVSRILAELR-FETMRTPNANSASVVNCERPPRYDSCLGEARDNPPSENCDPYNRANPC 114

[Close]
BLAST of CSPI03G21120 vs. TrEMBL
Match: A0A0A0KVZ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G131140 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 8.2e-14
Identity = 47/117 (40.17%), Postives = 65/117 (55.56%), Query Frame = 1 

Query: 3   ASALMIPATVVTMILLLHIPSSCDALTTFQPLLSNHSSYGGKLMMGEEDMELEFLMESHI 62
           A+   IP   + ++ LL  P+ C+  TT     S         ++G+E ++ EFLME+  
Sbjct: 2   ATTFSIPTMAILILTLLFNPTRCN--TTVNETTSEWCYGSENCLVGDESLDSEFLMETET 61

Query: 63  SRILASSKNYQTASTTNANKASGGGCDRPPRYDSCLGKKRNNPPPPNCSTYNRANPC 120
           SR+L   +N QT  T + N+ S   C RPPRYDSC G++R  P P NC   NRANPC
Sbjct: 62  SRMLLDFQNLQTPGTIDPNRQSVAECGRPPRYDSCTGEERQIPNPENCDVRNRANPC 116

[Close]
BLAST of CSPI03G21120 vs. TrEMBL
Match: A0A0A0KW62_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G130630 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.3e-08
Identity = 36/75 (48.00%), Postives = 45/75 (60.00%), Query Frame = 1 

Query: 46  MMGEEDMELEFLMESHISRILASS-KNYQTASTTNANKASGGGCDRPPRYDSCLGKKRNN 105
           ++G+ +   EFLM +  S +L      +QT    +ANK S   C RPPRYDSCLG KR+ 
Sbjct: 53  LVGDLNSHSEFLMLTESSGMLVDQFLTFQTPKANDANKESVPDCSRPPRYDSCLGSKRSI 112

Query: 106 PPPPNCSTYNRANPC 120
           P P  CST NR NPC
Sbjct: 113 PNPEPCSTLNRVNPC 127

[Close]
BLAST of CSPI03G21120 vs. NCBI nr
Match: gi|700202648|gb|KGN57781.1| (hypothetical protein Csa_3G298580 [Cucumis sativus])

HSP 1 Score: 234.6 bits (597), Expect = 9.2e-59
Identity = 117/119 (98.32%), Postives = 117/119 (98.32%), Query Frame = 1 

Query: 1   MGASALMIPATVVTMILLLHIPSSCDALTTFQPLLSNHSSYGGKLMMGEEDMELEFLMES 60
           MGASALMIPA VVTMILLLHIPSSCDALTTFQPLLSNHSSYGGKLMMGEEDMELEFLMES
Sbjct: 1   MGASALMIPAAVVTMILLLHIPSSCDALTTFQPLLSNHSSYGGKLMMGEEDMELEFLMES 60

Query: 61  HISRILASSKNYQTASTTNANKASGGGCDRPPRYDSCLGKKRNNPPPPNCSTYNRANPC 120
           HISRILASSKNYQTASTTNANKASGGGCDRPPRYDSCLGKKRNNPPPPNCS YNRANPC
Sbjct: 61  HISRILASSKNYQTASTTNANKASGGGCDRPPRYDSCLGKKRNNPPPPNCSPYNRANPC 119

[Close]
BLAST of CSPI03G21120 vs. NCBI nr
Match: gi|778680757|ref|XP_011651393.1| (PREDICTED: uncharacterized protein LOC105434882 [Cucumis sativus])

HSP 1 Score: 131.3 bits (329), Expect = 1.1e-27
Identity = 71/119 (59.66%), Postives = 94/119 (78.99%), Query Frame = 1 

Query: 3   ASALMIPATVVTMILLLHIPSSC-DALTTFQPLLSNHSSYG-GKLMMGEEDMELEFLMES 62
           A ALMIPA +  M+++L IP++C  ALT+F+P L+NH+S G  K M+ EED++  F+MES
Sbjct: 4   APALMIPAAMAMMLMML-IPTACGGALTSFKP-LNNHTSGGLVKYMVEEEDIKSNFVMES 63

Query: 63  HISRILASSKNYQTASTTNANKASGGGCDRPPRYDSCLGKKRNNPPPPNCSTYNRANPC 120
           HISR+LA S++++T+ST NA + S G CDRPPRYDSCLG KRN PPP NCST+NR +PC
Sbjct: 64  HISRMLADSQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNREHPC 120

[Close]
BLAST of CSPI03G21120 vs. NCBI nr
Match: gi|659114334|ref|XP_008457017.1| (PREDICTED: uncharacterized protein LOC103496797 [Cucumis melo])

HSP 1 Score: 125.2 bits (313), Expect = 7.9e-26
Identity = 71/121 (58.68%), Postives = 90/121 (74.38%), Query Frame = 1 

Query: 3   ASALMIPATVVTMILLLHIPSSCDALTTFQPLLSNHSSYGGKL---MMGEEDMELEFLME 62
           A A+MIPA V  MI++L IP++C    TF   L+NH+S GG +   M+ EED +  F+ME
Sbjct: 4   APAVMIPAAVAMMIMML-IPTACGGAFTFFKPLNNHTS-GGLVRYNMVEEEDTKSNFVME 63

Query: 63  SHISRILA-SSKNYQTASTTNANKASGGGCDRPPRYDSCLGKKRNNPPPPNCSTYNRANP 120
           SHISR+LA SS++++T+ST NA + S G CDRPPRYDSCLG KRN PPP NCSTYNR +P
Sbjct: 64  SHISRMLADSSQDFETSSTNNATQVSTGECDRPPRYDSCLGDKRNTPPPQNCSTYNREHP 122

[Close]
BLAST of CSPI03G21120 vs. NCBI nr
Match: gi|700202646|gb|KGN57779.1| (hypothetical protein Csa_3G298070 [Cucumis sativus])

HSP 1 Score: 102.4 bits (254), Expect = 5.5e-19
Identity = 61/119 (51.26%), Postives = 79/119 (66.39%), Query Frame = 1 

Query: 1   MGASALMIPATVVTMILLLHIPSSCDALTTFQPLLSNHSSYGGKLMMGEEDMELEFLMES 60
           M A+ L I  T+  + LLL +   CDA    +P+  N SS  GK ++G  D++ +FLMES
Sbjct: 1   MAAATLSIRTTLAIVTLLL-VAVGCDAFIASKPVF-NLSSDLGKRLIG--DIDTDFLMES 60

Query: 61  HISRILASSKNYQTASTTNANKASGGGCDRPPRYDSCLGKKRNNPPPPNCSTYNRANPC 120
           H+SRILA  + ++T  T NAN AS   C+RPPRYDSCLG+ R+NPP  NC  YNRANPC
Sbjct: 61  HVSRILAELR-FETMRTPNANSASVVNCERPPRYDSCLGEARDNPPSENCDPYNRANPC 114

[Close]
BLAST of CSPI03G21120 vs. NCBI nr
Match: gi|700198642|gb|KGN53800.1| (hypothetical protein Csa_4G131140 [Cucumis sativus])

HSP 1 Score: 84.7 bits (208), Expect = 1.2e-13
Identity = 47/117 (40.17%), Postives = 65/117 (55.56%), Query Frame = 1 

Query: 3   ASALMIPATVVTMILLLHIPSSCDALTTFQPLLSNHSSYGGKLMMGEEDMELEFLMESHI 62
           A+   IP   + ++ LL  P+ C+  TT     S         ++G+E ++ EFLME+  
Sbjct: 2   ATTFSIPTMAILILTLLFNPTRCN--TTVNETTSEWCYGSENCLVGDESLDSEFLMETET 61

Query: 63  SRILASSKNYQTASTTNANKASGGGCDRPPRYDSCLGKKRNNPPPPNCSTYNRANPC 120
           SR+L   +N QT  T + N+ S   C RPPRYDSC G++R  P P NC   NRANPC
Sbjct: 62  SRMLLDFQNLQTPGTIDPNRQSVAECGRPPRYDSCTGEERQIPNPENCDVRNRANPC 116

The following BLAST results are available for this feature:
BLAST of CSPI03G21120 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI03G21120 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LCJ4_CUCSA6.4e-5998.32Uncharacterized protein OS=Cucumis sativus GN=Csa_3G298580 PE=4 SV=1[more]
A0A0A0L711_CUCSA7.6e-2859.66Uncharacterized protein OS=Cucumis sativus GN=Csa_3G298570 PE=4 SV=1[more]
A0A0A0L9X5_CUCSA3.8e-1951.26Uncharacterized protein OS=Cucumis sativus GN=Csa_3G298070 PE=4 SV=1[more]
A0A0A0KVZ2_CUCSA8.2e-1440.17Uncharacterized protein OS=Cucumis sativus GN=Csa_4G131140 PE=4 SV=1[more]
A0A0A0KW62_CUCSA2.3e-0848.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G130630 PE=4 SV=1[more]
BLAST of CSPI03G21120 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI03G21120 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700202648|gb|KGN57781.1|9.2e-5998.32hypothetical protein Csa_3G298580 [Cucumis sativus][more]
gi|778680757|ref|XP_011651393.1|1.1e-2759.66PREDICTED: uncharacterized protein LOC105434882 [Cucumis sativus][more]
gi|659114334|ref|XP_008457017.1|7.9e-2658.68PREDICTED: uncharacterized protein LOC103496797 [Cucumis melo][more]
gi|700202646|gb|KGN57779.1|5.5e-1951.26hypothetical protein Csa_3G298070 [Cucumis sativus][more]
gi|700198642|gb|KGN53800.1|1.2e-1340.17hypothetical protein Csa_4G131140 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G21120.1CSPI03G21120.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI03G21120Silver-seed gourdcarcpiB0519
CSPI03G21120Silver-seed gourdcarcpiB0520
CSPI03G21120Silver-seed gourdcarcpiB0798
CSPI03G21120Cucumber (Chinese Long) v3cpicucB144
CSPI03G21120Watermelon (97103) v2cpiwmbB213
CSPI03G21120Watermelon (97103) v2cpiwmbB224
CSPI03G21120Wax gourdcpiwgoB271
CSPI03G21120Wax gourdcpiwgoB303
CSPI03G21120Cucurbita maxima (Rimu)cmacpiB244
CSPI03G21120Cucurbita maxima (Rimu)cmacpiB458
CSPI03G21120Cucurbita moschata (Rifu)cmocpiB232
CSPI03G21120Cucurbita moschata (Rifu)cmocpiB446
CSPI03G21120Cucumber (Chinese Long) v2cpicuB120
CSPI03G21120Melon (DHL92) v3.5.1cpimeB243
CSPI03G21120Watermelon (Charleston Gray)cpiwcgB230
CSPI03G21120Watermelon (97103) v1cpiwmB236
CSPI03G21120Cucurbita pepo (Zucchini)cpecpiB602
CSPI03G21120Bottle gourd (USVL1VR-Ls)cpilsiB203
CSPI03G21120Bottle gourd (USVL1VR-Ls)cpilsiB210
CSPI03G21120Melon (DHL92) v3.6.1cpimedB240
CSPI03G21120Cucumber (Gy14) v2cgybcpiB110