CSPI03G21110 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G21110
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr3 : 17163179 .. 17165794 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAAAGGATCCCCTCATTCTTCTTCCTTCCCAAATCCTTAGGCCCATTCCTCCGCCTCCCATAGCCGTTATCAAAACCAGAAACGGCAATGGCGACTGCACCAGCGCTGATGATACCAGCCGCCATGGCGATGATGCTTATGATGCTCATTCCAACTGCATGCGGCGGTGCTCTTACATCCTTTAAACCACTCAACAACCACACTTCCGGGGGTAAGTTTGCCAATAAATTTTAAATCTTTTTTTATTCAGCAAAATACTTCTAATAAATACTTAGACGAGGAGCTTCCTTTCCTTCAAATGCTCATTTTGGTTATTCATACGTTCTACTTTTTAGATTTGCTCTAATACTTAATCTTTACACATTATCAAAAAGTCAATTTTATTAGTACTCTACTTTTAAGATTAGTGTCTAATAAGTTTACAAAAACTAAAAATGTATTTTAACTTCACTTTGGCATTGAAAACATAATTATATCTTTATTTATATGTAAATATATATCATCCTTAATATATTTAAAAGACTAAAATTATAATTATAATTATAGTTTTTAAATCTTTAAACTTTAAAAAATCTATGTAACAAGTCTTTCTTGAACTTTAAGCGTCATTTGTTTCCGAATTCATTTTCATTCTTGCGTTTTCAAAATTTAAAAAAATATAAAAAATAATTAAAACGTGTTTGATATACTTTTTCAAAAACTATTTTATAGAAGAAAGTAGAAATTTTCAAATAATAAATTATCATTTTTGAAAATAATAAAAGAAAATTTTTAAAAATAACAAGTTTTACAAAATACTTACCATCTATAGCAAATTATAGTTATCGATATGTTATAGTGATAGTAGACTATCAAAATTTTGCTACAGCTTGTAAATATTTTAATTTATTTTGCTATTTTTAAAAATATCTTTTTTTTTTTATCATATATCCAAACTATCCGTTCCAAACTCTTTCGGTATTCACTTCATTTTTACATATCTTACCTGATCTTTTTTTTTTTCATCTTTACAGAATTTAAAATTTGCACCATCTCATATTACACAAATGGGAGAAACTTGAAAAGATAATTGATAAATCTAGTTTGATAATTGATAAAAATTCAAATTAAAAATTCATGTAAACATAAATTAGTTCTAAGATTTGCAAGATAATACAAGATTAATAAAGATGGCTGAAGAAAAATTGAGAGGATAATTTGAAAGATGGCATAATATGTGAAAAGTTAGGTCGTTTTCAGTGTTCATCATAGACAAATTAGCATGGACCAAGATCCTGAATATATATTTGCACTTTCTTGGTAAAGTCTTAGACATAATAAACACCAAAATTCTACATATTTGAGCTTTGATGAAATCTTGCACAGATAAACATCTAAATCTTACTTAATGTATAGAAAATTTTGATCTTTTCTAAAATTTGAAGATGTCAATGAAGTCATCGTCTAAAATCTATTTTTATCATTAGTAAGTTCATATGAAAATTTGAAAAATTATTTAAGATTGGACAAAGATAATTAGAAATTTTTTAAGAGACCAAAGATTTGGATGAGATTTGAAAAGATTAAATAACATTTAAAATATTTAGTAGAATCTCATTATAAATCCTACAGAGATTTCACTAAGAAAGTTCAAAATACTTTACAACAGAAAAGTTAACTTTACTTGACTAAATCTCGAACAAAAAAGAAAAAAGAGTTTAACATATTTTCGAAGTGTTAGTCTTAAAAAGTTAAACTTAAAAAACCATTTATGATAATTTTCTACAACAAAAGCTTCACAATAATATAATTTTGTTCAAAACAAAAGAAACTTTTGGATTGGGTGTCTAAGTTTTCAAAATGCACCTATGACTAAAAGCATATTTACCAAAAATCGAACTTTTTCATTGTTTTTAGATAAGTTAAAAATCATTTTTAGTTCCTAAGCTTTTATAAAAATGACAATTTAGTTGTTGTATTTTAAATTTTATAATAATTTATATGGCGATCTTATTATAGAGAAAATTTATTTTAACTTCTAACATTGTATATCTATTGTTTGACCACAAGTTTTTATTTATTTATTTATTTTTGTATTTAAGAAAGTATAAATTATAAAATTTTTGTGTTTGTGTGGAAGGTGGTTGAGAAGTTAGAAAATGATGGAATACGTAAATGATTATGATGGAAACACTAAAATAATGAAAATTGAACACAAATTGGAAAAAAAAAAAAATTGTTTGTTTGATTAGGTTTAGTAAAATACATGGTTGAAGAGGAGGATATTAAATCAAATTTCGTAATGGAGTCGCACATCAGCAGAATGTTGGCCGATTCTCAAGACTTCGAAACAAGCTCAACTAACAACGCCACCCAAGTTTCCGCCGGCGAATGCGACCGGCCGCCCCGCTACGACAGCTGCCTCGGCGTTAAAAGGAATACTCCGCCACCACAAAATTGTAGCACCTTCAATCGTGAACATCCCTGTTAGTTCATAATTAAATACAAACCCTATCTTTAATTTTATTTTAGTTATAAGGTTAAAATGCTACTTTCTTTTTCTTTTTTCTTTTAATTAATTAATGTACTTTCATATTTGTTCTATTTTACTTTATATATTTCTAAAATTGTTCACT

mRNA sequence

ATGGCGACTGCACCAGCGCTGATGATACCAGCCGCCATGGCGATGATGCTTATGATGCTCATTCCAACTGCATGCGGCGGTGCTCTTACATCCTTTAAACCACTCAACAACCACACTTCCGGGGGTTTAGTAAAATACATGGTTGAAGAGGAGGATATTAAATCAAATTTCGTAATGGAGTCGCACATCAGCAGAATGTTGGCCGATTCTCAAGACTTCGAAACAAGCTCAACTAACAACGCCACCCAAGTTTCCGCCGGCGAATGCGACCGGCCGCCCCGCTACGACAGCTGCCTCGGCGTTAAAAGGAATACTCCGCCACCACAAAATTGTAGCACCTTCAATCGTGAACATCCCTGTTAG

Coding sequence (CDS)

ATGGCGACTGCACCAGCGCTGATGATACCAGCCGCCATGGCGATGATGCTTATGATGCTCATTCCAACTGCATGCGGCGGTGCTCTTACATCCTTTAAACCACTCAACAACCACACTTCCGGGGGTTTAGTAAAATACATGGTTGAAGAGGAGGATATTAAATCAAATTTCGTAATGGAGTCGCACATCAGCAGAATGTTGGCCGATTCTCAAGACTTCGAAACAAGCTCAACTAACAACGCCACCCAAGTTTCCGCCGGCGAATGCGACCGGCCGCCCCGCTACGACAGCTGCCTCGGCGTTAAAAGGAATACTCCGCCACCACAAAATTGTAGCACCTTCAATCGTGAACATCCCTGTTAG
Homology
[Close]
BLAST of CSPI03G21110 vs. TrEMBL
Match: A0A0A0L711_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G298570 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 6.9e-61
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 1 

Query: 1   MATAPALMIPAAMAMMLMMLIPTACGGALTSFKPLNNHTSGGLVKYMVEEEDIKSNFVME 60
           MATAPALMIPAAMAMMLMMLIPTACGGALTSFKPLNNHTSGGLVKYMVEEEDIKSNFVME
Sbjct: 1   MATAPALMIPAAMAMMLMMLIPTACGGALTSFKPLNNHTSGGLVKYMVEEEDIKSNFVME 60

Query: 61  SHISRMLADSQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNREHPC 120
           SHISRMLADSQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNREHPC
Sbjct: 61  SHISRMLADSQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNREHPC 120

[Close]
BLAST of CSPI03G21110 vs. TrEMBL
Match: A0A0A0LCJ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G298580 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 3.5e-28
Identity = 71/119 (59.66%), Postives = 94/119 (78.99%), Query Frame = 1 

Query: 4   APALMIPAAMAMMLMML-IPTACGGALTSFKP-LNNHTSGGLVKYMVEEEDIKSNFVMES 63
           A ALMIPAA+  M+++L IP++C  ALT+F+P L+NH+S G  K M+ EED++  F+MES
Sbjct: 3   ASALMIPAAVVTMILLLHIPSSC-DALTTFQPLLSNHSSYG-GKLMMGEEDMELEFLMES 62

Query: 64  HISRMLADSQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNREHPC 121
           HISR+LA S++++T+ST NA + S G CDRPPRYDSCLG KRN PPP NCS +NR +PC
Sbjct: 63  HISRILASSKNYQTASTTNANKASGGGCDRPPRYDSCLGKKRNNPPPPNCSPYNRANPC 119

[Close]
BLAST of CSPI03G21110 vs. TrEMBL
Match: A0A0A0L9X5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G298070 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 9.8e-15
Identity = 51/117 (43.59%), Postives = 73/117 (62.39%), Query Frame = 1 

Query: 4   APALMIPAAMAMMLMMLIPTACGGALTSFKPLNNHTSGGLVKYMVEEEDIKSNFVMESHI 63
           A  L I   +A++ ++L+   C   + S KP+ N  S  L K ++   DI ++F+MESH+
Sbjct: 3   AATLSIRTTLAIVTLLLVAVGCDAFIAS-KPVFN-LSSDLGKRLIG--DIDTDFLMESHV 62

Query: 64  SRMLADSQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNREHPC 121
           SR+LA+ + FET  T NA   S   C+RPPRYDSCLG  R+ PP +NC  +NR +PC
Sbjct: 63  SRILAELR-FETMRTPNANSASVVNCERPPRYDSCLGEARDNPPSENCDPYNRANPC 114

[Close]
BLAST of CSPI03G21110 vs. TrEMBL
Match: A0A0A0KVZ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G131140 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.3e-11
Identity = 45/118 (38.14%), Postives = 62/118 (52.54%), Query Frame = 1 

Query: 4   APALMIPAAMAMMLMMLI-PTACGGALTSFKPLNNHTSGGLVKYMVEEEDIKSNFVMESH 63
           A    IP    ++L +L  PT C    T+     +    G    +V +E + S F+ME+ 
Sbjct: 2   ATTFSIPTMAILILTLLFNPTRCN---TTVNETTSEWCYGSENCLVGDESLDSEFLMETE 61

Query: 64  ISRMLADSQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNREHPC 121
            SRML D Q+ +T  T +  + S  EC RPPRYDSC G +R  P P+NC   NR +PC
Sbjct: 62  TSRMLLDFQNLQTPGTIDPNRQSVAECGRPPRYDSCTGEERQIPNPENCDVRNRANPC 116

[Close]
BLAST of CSPI03G21110 vs. TrEMBL
Match: A0A0A0KW62_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G130630 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.0e-08
Identity = 43/118 (36.44%), Postives = 63/118 (53.39%), Query Frame = 1 

Query: 4   APALMIPAAMAMMLMMLIPTACGGALTSFKPLNNHTSGGLVKYMVEEEDIKSNFVMESHI 63
           A  L +P+   ++ ++L+      A  +        S GL   +V + +  S F+M +  
Sbjct: 10  AATLTMPSMAFLITILLLNPIISNAGMNDTESKWCDSTGLENCLVGDLNSHSEFLMLTES 69

Query: 64  SRMLADS-QDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNREHPC 121
           S ML D    F+T   N+A + S  +C RPPRYDSCLG KR+ P P+ CST NR +PC
Sbjct: 70  SGMLVDQFLTFQTPKANDANKESVPDCSRPPRYDSCLGSKRSIPNPEPCSTLNRVNPC 127

[Close]
BLAST of CSPI03G21110 vs. NCBI nr
Match: gi|778680757|ref|XP_011651393.1| (PREDICTED: uncharacterized protein LOC105434882 [Cucumis sativus])

HSP 1 Score: 241.1 bits (614), Expect = 9.9e-61
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 1 

Query: 1   MATAPALMIPAAMAMMLMMLIPTACGGALTSFKPLNNHTSGGLVKYMVEEEDIKSNFVME 60
           MATAPALMIPAAMAMMLMMLIPTACGGALTSFKPLNNHTSGGLVKYMVEEEDIKSNFVME
Sbjct: 1   MATAPALMIPAAMAMMLMMLIPTACGGALTSFKPLNNHTSGGLVKYMVEEEDIKSNFVME 60

Query: 61  SHISRMLADSQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNREHPC 120
           SHISRMLADSQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNREHPC
Sbjct: 61  SHISRMLADSQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNREHPC 120

[Close]
BLAST of CSPI03G21110 vs. NCBI nr
Match: gi|659114334|ref|XP_008457017.1| (PREDICTED: uncharacterized protein LOC103496797 [Cucumis melo])

HSP 1 Score: 216.1 bits (549), Expect = 3.4e-53
Identity = 110/122 (90.16%), Postives = 115/122 (94.26%), Query Frame = 1 

Query: 1   MATAPALMIPAAMAMMLMMLIPTACGGALTSFKPLNNHTSGGLVKY-MVEEEDIKSNFVM 60
           MATAPA+MIPAA+AMM+MMLIPTACGGA T FKPLNNHTSGGLV+Y MVEEED KSNFVM
Sbjct: 1   MATAPAVMIPAAVAMMIMMLIPTACGGAFTFFKPLNNHTSGGLVRYNMVEEEDTKSNFVM 60

Query: 61  ESHISRMLAD-SQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNREH 120
           ESHISRMLAD SQDFETSSTNNATQVS GECDRPPRYDSCLG KRNTPPPQNCST+NREH
Sbjct: 61  ESHISRMLADSSQDFETSSTNNATQVSTGECDRPPRYDSCLGDKRNTPPPQNCSTYNREH 120

[Close]
BLAST of CSPI03G21110 vs. NCBI nr
Match: gi|700202648|gb|KGN57781.1| (hypothetical protein Csa_3G298580 [Cucumis sativus])

HSP 1 Score: 132.5 bits (332), Expect = 5.0e-28
Identity = 71/119 (59.66%), Postives = 94/119 (78.99%), Query Frame = 1 

Query: 4   APALMIPAAMAMMLMML-IPTACGGALTSFKP-LNNHTSGGLVKYMVEEEDIKSNFVMES 63
           A ALMIPAA+  M+++L IP++C  ALT+F+P L+NH+S G  K M+ EED++  F+MES
Sbjct: 3   ASALMIPAAVVTMILLLHIPSSC-DALTTFQPLLSNHSSYG-GKLMMGEEDMELEFLMES 62

Query: 64  HISRMLADSQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNREHPC 121
           HISR+LA S++++T+ST NA + S G CDRPPRYDSCLG KRN PPP NCS +NR +PC
Sbjct: 63  HISRILASSKNYQTASTTNANKASGGGCDRPPRYDSCLGKKRNNPPPPNCSPYNRANPC 119

[Close]
BLAST of CSPI03G21110 vs. NCBI nr
Match: gi|700202646|gb|KGN57779.1| (hypothetical protein Csa_3G298070 [Cucumis sativus])

HSP 1 Score: 87.8 bits (216), Expect = 1.4e-14
Identity = 51/117 (43.59%), Postives = 73/117 (62.39%), Query Frame = 1 

Query: 4   APALMIPAAMAMMLMMLIPTACGGALTSFKPLNNHTSGGLVKYMVEEEDIKSNFVMESHI 63
           A  L I   +A++ ++L+   C   + S KP+ N  S  L K ++   DI ++F+MESH+
Sbjct: 3   AATLSIRTTLAIVTLLLVAVGCDAFIAS-KPVFN-LSSDLGKRLIG--DIDTDFLMESHV 62

Query: 64  SRMLADSQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNREHPC 121
           SR+LA+ + FET  T NA   S   C+RPPRYDSCLG  R+ PP +NC  +NR +PC
Sbjct: 63  SRILAELR-FETMRTPNANSASVVNCERPPRYDSCLGEARDNPPSENCDPYNRANPC 114

[Close]
BLAST of CSPI03G21110 vs. NCBI nr
Match: gi|700198642|gb|KGN53800.1| (hypothetical protein Csa_4G131140 [Cucumis sativus])

HSP 1 Score: 77.4 bits (189), Expect = 1.9e-11
Identity = 45/118 (38.14%), Postives = 62/118 (52.54%), Query Frame = 1 

Query: 4   APALMIPAAMAMMLMMLI-PTACGGALTSFKPLNNHTSGGLVKYMVEEEDIKSNFVMESH 63
           A    IP    ++L +L  PT C    T+     +    G    +V +E + S F+ME+ 
Sbjct: 2   ATTFSIPTMAILILTLLFNPTRCN---TTVNETTSEWCYGSENCLVGDESLDSEFLMETE 61

Query: 64  ISRMLADSQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNREHPC 121
            SRML D Q+ +T  T +  + S  EC RPPRYDSC G +R  P P+NC   NR +PC
Sbjct: 62  TSRMLLDFQNLQTPGTIDPNRQSVAECGRPPRYDSCTGEERQIPNPENCDVRNRANPC 116

The following BLAST results are available for this feature:
BLAST of CSPI03G21110 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI03G21110 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L711_CUCSA6.9e-61100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G298570 PE=4 SV=1[more]
A0A0A0LCJ4_CUCSA3.5e-2859.66Uncharacterized protein OS=Cucumis sativus GN=Csa_3G298580 PE=4 SV=1[more]
A0A0A0L9X5_CUCSA9.8e-1543.59Uncharacterized protein OS=Cucumis sativus GN=Csa_3G298070 PE=4 SV=1[more]
A0A0A0KVZ2_CUCSA1.3e-1138.14Uncharacterized protein OS=Cucumis sativus GN=Csa_4G131140 PE=4 SV=1[more]
A0A0A0KW62_CUCSA1.0e-0836.44Uncharacterized protein OS=Cucumis sativus GN=Csa_4G130630 PE=4 SV=1[more]
BLAST of CSPI03G21110 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI03G21110 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778680757|ref|XP_011651393.1|9.9e-61100.00PREDICTED: uncharacterized protein LOC105434882 [Cucumis sativus][more]
gi|659114334|ref|XP_008457017.1|3.4e-5390.16PREDICTED: uncharacterized protein LOC103496797 [Cucumis melo][more]
gi|700202648|gb|KGN57781.1|5.0e-2859.66hypothetical protein Csa_3G298580 [Cucumis sativus][more]
gi|700202646|gb|KGN57779.1|1.4e-1443.59hypothetical protein Csa_3G298070 [Cucumis sativus][more]
gi|700198642|gb|KGN53800.1|1.9e-1138.14hypothetical protein Csa_4G131140 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G21110.1CSPI03G21110.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI03G21110Bottle gourd (USVL1VR-Ls)cpilsiB203
CSPI03G21110Bottle gourd (USVL1VR-Ls)cpilsiB210
CSPI03G21110Melon (DHL92) v3.6.1cpimedB240
CSPI03G21110Cucumber (Gy14) v2cgybcpiB110
CSPI03G21110Silver-seed gourdcarcpiB0519
CSPI03G21110Silver-seed gourdcarcpiB0520
CSPI03G21110Silver-seed gourdcarcpiB0798
CSPI03G21110Cucumber (Chinese Long) v3cpicucB144
CSPI03G21110Watermelon (97103) v2cpiwmbB213
CSPI03G21110Watermelon (97103) v2cpiwmbB224
CSPI03G21110Wax gourdcpiwgoB271
CSPI03G21110Wax gourdcpiwgoB303
CSPI03G21110Cucurbita maxima (Rimu)cmacpiB244
CSPI03G21110Cucurbita maxima (Rimu)cmacpiB458
CSPI03G21110Cucurbita moschata (Rifu)cmocpiB232
CSPI03G21110Cucurbita moschata (Rifu)cmocpiB446
CSPI03G21110Cucumber (Chinese Long) v2cpicuB120
CSPI03G21110Melon (DHL92) v3.5.1cpimeB243
CSPI03G21110Watermelon (Charleston Gray)cpiwcgB230
CSPI03G21110Watermelon (97103) v1cpiwmB236
CSPI03G21110Cucurbita pepo (Zucchini)cpecpiB602