CSPI03G21080 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI03G21080
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Acyl-coenzyme A oxidase
Location	Chr3 : 17141009 .. 17142340 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGTCGTTTAAACTCTTGGAATTATGTTTAATGGTTCATCTCTCATTCTCTATTTTTTTCTTTGTTTAGGGATATTCGTTCCATTCCTTAAAGGTCAAAGTACTGAGGAGCAGCTACAGAAGTGGTTGTCATTGACATATAAGATGCAAATAATTGGTTGCTATGCTCAAACCAAACTTGGTCATAATGTTCAAGGGCTTGGAACAACTGCAATGTTTTATCCAAAGATAGACGAATTTGCCATACACAGTCCTACCACTAACCTCAAGCAAAGTAAGTATAGTGGAAGTTAGTTACCTCTTACCTGTATTAGATTGATCTGTATCAAACTTTGTTTCATCTTTCTATGCCAATAATTAAAGAATTTGTTTCTTATAGGTGTGCAAATTGAATGGACTAGATTGATAATTGAAGAGAAATTTTAATTAAATTTGATATTCCATGGATGATTTTTGAAGGAGAGTTTTTCGGTTGTTTTGATGGATCCTGAGAGAGAGAGAGGGGAGGTTATGGGGGAGGTGCAGCGGCGGCGGAAGAGAAGTGGCGTTGTTGCCTTATATACATACTTATCTTTTTTTTCCCTTCAATTTCAGTTCTCTGTTTTCAACGGAACTAAAAAAAATTCCCAAAGGGAAAACGATTGTTTTGAATTCAATAAAACATAGCAAGTACTTTTTCTACTTGGGTTTTGGGGTTTTATGAGAAAGAATCATATACTAAAACAAGTTTGTTGCAGGGGAGAAACAAGTTATATGAAGGCCATGATATGAATACTGCATTATATGTTGTTGCATTGAATCGCTGTTAAACTTGGATTGAATCATAACATTTAATTCTCTACTGATTTGGATTTTTAAGTTTGCTAATTTGATGGTGATCTTTTAAGCTGCTTCAACTATTTCACAAGCATTGAATGCTATTTTATTTTACTCAGTATACTGTATCCATTTCTTTATGTCAGTTTTTCTCTATTACGTGTTTAGAATATGTTGAAAAGAATAAACAGTACCCTAATGGACTTGAAGGAAATGCAGATTCTGGCAGCAAAGAAGATGAAACGGAGGACACTGATGGTGTGGAAGTGGAACATCTACACATTTCAGATTACCAAGGTTTTGCACTAATATCTTATTGATTTACTATAGTGATGAAGCTACCAAGCAAGTGATTGATGTTTGATTAATGACAAGAGTTGTTGTACTTTTGTTATCCATGACAATACCTTGTATTTAGTTTCCTTATAAAAATATATTACCAAGGCTTAGTTTCTATTATACTTGTATTTATCCATTCGGAAAAATTCGATAGATTTCGTGTACTTGGTTTCTTTAT

mRNA sequence

ATGTTTAATGGTTCATCTCTCATTCTCTATTTTTTTCTTTGTTTAGGGATATTCGTTCCATTCCTTAAAGGTCAAAGTACTGAGGAGCAGCTACAGAAGTGGTTGTCATTGACATATAAGATGCAAATAATTGGTTGCTATGCTCAAACCAAACTTGGTCATAATGTTCAAGGGCTTGGAACAACTGCAATGTTTTATCCAAAGATAGACGAATTTGCCATACACAGTCCTACCACTAACCTCAAGCAAAATTCTGGCAGCAAAGAAGATGAAACGGAGGACACTGATGGTGTGGAAGTGGAACATCTACACATTTCAGATTACCAAGGTTTTGCACTAATATCTTATTGA

Coding sequence (CDS)

ATGTTTAATGGTTCATCTCTCATTCTCTATTTTTTTCTTTGTTTAGGGATATTCGTTCCATTCCTTAAAGGTCAAAGTACTGAGGAGCAGCTACAGAAGTGGTTGTCATTGACATATAAGATGCAAATAATTGGTTGCTATGCTCAAACCAAACTTGGTCATAATGTTCAAGGGCTTGGAACAACTGCAATGTTTTATCCAAAGATAGACGAATTTGCCATACACAGTCCTACCACTAACCTCAAGCAAAATTCTGGCAGCAAAGAAGATGAAACGGAGGACACTGATGGTGTGGAAGTGGAACATCTACACATTTCAGATTACCAAGGTTTTGCACTAATATCTTATTGA

Homology

[Close]

BLAST of CSPI03G21080 vs. Swiss-Prot
Match: ACO12_ARATH (Putative peroxisomal acyl-coenzyme A oxidase 1.2 OS=Arabidopsis thaliana GN=ACX1.2 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 2.2e-20
Identity = 48/65 (73.85%), Postives = 53/65 (81.54%), Query Frame = 1


Query: 16  GIFVPFLKGQSTEEQLQKWLSLTYKMQIIGCYAQTKLGH--NVQGLGTTAMFYPKIDEFA 75
           G+FVP +KGQ TE+Q QKWLSL  KMQIIGCYAQT+LGH  NVQGL TTA F PK D+F 
Sbjct: 104 GMFVPAIKGQGTEQQQQKWLSLATKMQIIGCYAQTELGHGSNVQGLETTATFDPKTDQFI 163

Query: 76  IHSPT 79
           IHSPT
Sbjct: 164 IHSPT 168

[Close]

BLAST of CSPI03G21080 vs. Swiss-Prot
Match: ACOX1_ARATH (Peroxisomal acyl-coenzyme A oxidase 1 OS=Arabidopsis thaliana GN=ACX1 PE=1 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 2.8e-20
Identity = 50/71 (70.42%), Postives = 55/71 (77.46%), Query Frame = 1


Query: 10  YFFLCLGIFVPFLKGQSTEEQLQKWLSLTYKMQIIGCYAQTKLGH--NVQGLGTTAMFYP 69
           Y  L  G+FVP +KGQ TEEQ +KWLSL  KMQIIGCYAQT+LGH  NVQGL TTA F P
Sbjct: 98  YVDLHWGMFVPAIKGQGTEEQQKKWLSLANKMQIIGCYAQTELGHGSNVQGLETTATFDP 157

Query: 70  KIDEFAIHSPT 79
           K DEF IH+PT
Sbjct: 158 KTDEFVIHTPT 168

[Close]

BLAST of CSPI03G21080 vs. Swiss-Prot
Match: ACOX1_PHACI (Peroxisomal acyl-coenzyme A oxidase 1 OS=Phascolarctos cinereus GN=ACOX1 PE=1 SV=2)

HSP 1 Score: 68.6 bits (166), Expect = 5.3e-11
Identity = 36/73 (49.32%), Postives = 49/73 (67.12%), Query Frame = 1


Query: 13  LCLGIFVPFLKGQSTEEQLQKWLSLTYKMQIIGCYAQTKLGH--NVQGLGTTAMFYPKID 72
           L   +F+P L  Q T  Q QKWL  T  +QIIG YAQT++GH  +++GL TTA + PK  
Sbjct: 102 LTYSMFIPTLLDQGTTAQQQKWLPPTQGLQIIGTYAQTEMGHGTHLRGLETTATYDPKTQ 161

Query: 73  EFAIHSPT-TNLK 83
           EF ++SPT T++K
Sbjct: 162 EFILNSPTVTSIK 174

[Close]

BLAST of CSPI03G21080 vs. Swiss-Prot
Match: ACOX1_CAVPO (Peroxisomal acyl-coenzyme A oxidase 1 OS=Cavia porcellus GN=ACOX1 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.6e-10
Identity = 34/69 (49.28%), Postives = 48/69 (69.57%), Query Frame = 1


Query: 17  IFVPFLKGQSTEEQLQKWLSLTYKMQIIGCYAQTKLGH--NVQGLGTTAMFYPKIDEFAI 76
           +F+P L  Q T  Q +KWL  +  +QIIG YAQT++GH  +++GL TTA + PK  EF I
Sbjct: 106 MFIPTLLNQGTTAQQEKWLHPSTGLQIIGTYAQTEMGHGTHLRGLETTATYDPKTQEFII 165

Query: 77  HSPT-TNLK 83
           +SPT T++K
Sbjct: 166 NSPTVTSIK 174

[Close]

BLAST of CSPI03G21080 vs. Swiss-Prot
Match: ACOX1_MOUSE (Peroxisomal acyl-coenzyme A oxidase 1 OS=Mus musculus GN=Acox1 PE=1 SV=5)

HSP 1 Score: 66.2 bits (160), Expect = 2.6e-10
Identity = 32/69 (46.38%), Postives = 49/69 (71.01%), Query Frame = 1


Query: 17  IFVPFLKGQSTEEQLQKWLSLTYKMQIIGCYAQTKLGH--NVQGLGTTAMFYPKIDEFAI 76
           +F+P L  Q T  Q +KW+  + ++QIIG YAQT++GH  +++GL TTA + PK  EF +
Sbjct: 106 MFIPTLLNQGTTAQQEKWMHPSQELQIIGTYAQTEMGHGTHLRGLETTATYDPKTQEFIL 165

Query: 77  HSPT-TNLK 83
           +SPT T++K
Sbjct: 166 NSPTVTSIK 174

[Close]

BLAST of CSPI03G21080 vs. TrEMBL
Match: A0A0A0L7J3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G298065 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.5e-31
Identity = 68/71 (95.77%), Postives = 69/71 (97.18%), Query Frame = 1


Query: 17 IFVPFLKGQSTEEQLQKWLSLTYKMQIIGCYAQTKLGHNVQGLGTTAMFYPKIDEFAIHS 76
          IFVPFLKGQSTEEQLQKWLSLTYKMQIIGCYAQTKLGHNVQGLGTTAMFYPKIDEFAIHS
Sbjct: 7  IFVPFLKGQSTEEQLQKWLSLTYKMQIIGCYAQTKLGHNVQGLGTTAMFYPKIDEFAIHS 66

Query: 77 PTTNLKQNSGS 88
          PTTNLKQ+  S
Sbjct: 67 PTTNLKQSKYS 77

[Close]

BLAST of CSPI03G21080 vs. TrEMBL
Match: A0A151SKZ8_CAJCA (Acyl-coenzyme A oxidase OS=Cajanus cajan GN=KK1_001633 PE=3 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.3e-19
Identity = 50/65 (76.92%), Postives = 53/65 (81.54%), Query Frame = 1


Query: 16  GIFVPFLKGQSTEEQLQKWLSLTYKMQIIGCYAQTKLGH--NVQGLGTTAMFYPKIDEFA 75
           G+FVP +KGQ TEEQ QKWL L YKMQIIGCYAQT+LGH  NVQGL TTA F PK DEF 
Sbjct: 105 GMFVPAIKGQGTEEQQQKWLPLAYKMQIIGCYAQTELGHGSNVQGLETTARFDPKTDEFV 164

Query: 76  IHSPT 79
           IHSPT
Sbjct: 165 IHSPT 169

[Close]

BLAST of CSPI03G21080 vs. TrEMBL
Match: V4MGR8_EUTSA (Acyl-coenzyme A oxidase OS=Eutrema salsugineum GN=EUTSA_v10024621mg PE=3 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 3.7e-19
Identity = 50/65 (76.92%), Postives = 53/65 (81.54%), Query Frame = 1


Query: 16  GIFVPFLKGQSTEEQLQKWLSLTYKMQIIGCYAQTKLGH--NVQGLGTTAMFYPKIDEFA 75
           G+FVP +KGQ TEEQ QKWLSL  KMQIIGCYAQT+LGH  NVQGL TTA F PK DEF 
Sbjct: 104 GMFVPAIKGQGTEEQQQKWLSLANKMQIIGCYAQTELGHGSNVQGLETTATFDPKTDEFV 163

Query: 76  IHSPT 79
           IHSPT
Sbjct: 164 IHSPT 168

[Close]

BLAST of CSPI03G21080 vs. TrEMBL
Match: A0A078I1I6_BRANA (Acyl-coenzyme A oxidase OS=Brassica napus GN=BnaA01g18160D PE=3 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 3.7e-19
Identity = 50/65 (76.92%), Postives = 53/65 (81.54%), Query Frame = 1


Query: 16  GIFVPFLKGQSTEEQLQKWLSLTYKMQIIGCYAQTKLGH--NVQGLGTTAMFYPKIDEFA 75
           G+FVP +KGQ TEEQ QKWLSL  KMQIIGCYAQT+LGH  NVQGL TTA F PK DEF 
Sbjct: 104 GMFVPAIKGQGTEEQQQKWLSLANKMQIIGCYAQTELGHGSNVQGLETTATFDPKTDEFV 163

Query: 76  IHSPT 79
           IHSPT
Sbjct: 164 IHSPT 168

[Close]

BLAST of CSPI03G21080 vs. TrEMBL
Match: M4FG66_BRARP (Acyl-coenzyme A oxidase OS=Brassica rapa subsp. pekinensis PE=3 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 3.7e-19
Identity = 50/65 (76.92%), Postives = 53/65 (81.54%), Query Frame = 1


Query: 16  GIFVPFLKGQSTEEQLQKWLSLTYKMQIIGCYAQTKLGH--NVQGLGTTAMFYPKIDEFA 75
           G+FVP +KGQ TEEQ QKWLSL  KMQIIGCYAQT+LGH  NVQGL TTA F PK DEF 
Sbjct: 104 GMFVPAIKGQGTEEQQQKWLSLANKMQIIGCYAQTELGHGSNVQGLETTATFDPKTDEFV 163

Query: 76  IHSPT 79
           IHSPT
Sbjct: 164 IHSPT 168

[Close]

BLAST of CSPI03G21080 vs. TAIR10
Match: AT2G35690.1 (AT2G35690.1 acyl-CoA oxidase 5)

HSP 1 Score: 99.8 bits (247), Expect = 1.2e-21
Identity = 48/65 (73.85%), Postives = 53/65 (81.54%), Query Frame = 1


Query: 16  GIFVPFLKGQSTEEQLQKWLSLTYKMQIIGCYAQTKLGH--NVQGLGTTAMFYPKIDEFA 75
           G+FVP +KGQ TE+Q QKWLSL  KMQIIGCYAQT+LGH  NVQGL TTA F PK D+F 
Sbjct: 104 GMFVPAIKGQGTEQQQQKWLSLATKMQIIGCYAQTELGHGSNVQGLETTATFDPKTDQFI 163

Query: 76  IHSPT 79
           IHSPT
Sbjct: 164 IHSPT 168

[Close]

BLAST of CSPI03G21080 vs. TAIR10
Match: AT4G16760.1 (AT4G16760.1 acyl-CoA oxidase 1)

HSP 1 Score: 99.4 bits (246), Expect = 1.6e-21
Identity = 50/71 (70.42%), Postives = 55/71 (77.46%), Query Frame = 1


Query: 10  YFFLCLGIFVPFLKGQSTEEQLQKWLSLTYKMQIIGCYAQTKLGH--NVQGLGTTAMFYP 69
           Y  L  G+FVP +KGQ TEEQ +KWLSL  KMQIIGCYAQT+LGH  NVQGL TTA F P
Sbjct: 98  YVDLHWGMFVPAIKGQGTEEQQKKWLSLANKMQIIGCYAQTELGHGSNVQGLETTATFDP 157

Query: 70  KIDEFAIHSPT 79
           K DEF IH+PT
Sbjct: 158 KTDEFVIHTPT 168

[Close]

BLAST of CSPI03G21080 vs. TAIR10
Match: AT1G06290.1 (AT1G06290.1 acyl-CoA oxidase 3)

HSP 1 Score: 48.5 bits (114), Expect = 3.2e-06
Identity = 28/71 (39.44%), Postives = 41/71 (57.75%), Query Frame = 1


Query: 9   LYFFLCLGIFVPFLKGQSTEEQLQKWLSLTYKMQIIGCYAQTKLGH--NVQGLGTTAMFY 68
           ++FFL  G  V F     T+   +KWL  T    + GC+A T+LGH  NV+G+ T   + 
Sbjct: 152 VHFFLW-GNAVKFF---GTKRHHEKWLKNTEDYVVKGCFAMTELGHGSNVRGIETVTTYD 211

Query: 69  PKIDEFAIHSP 78
           PK +EF I++P
Sbjct: 212 PKTEEFVINTP 218

[Close]

BLAST of CSPI03G21080 vs. TAIR10
Match: AT1G06310.1 (AT1G06310.1 acyl-CoA oxidase 6)

HSP 1 Score: 47.0 bits (110), Expect = 9.4e-06
Identity = 26/68 (38.24%), Postives = 37/68 (54.41%), Query Frame = 1


Query: 12  FLCLGIFVPFLKGQSTEEQLQKWLSLTYKMQIIGCYAQTKLGH--NVQGLGTTAMFYPKI 71
           FL  G  V F     T+   +KWL  T    + GC+A T+LGH  NV+G+ T   + P  
Sbjct: 154 FLLWGNAVKFF---GTKRHHEKWLKDTEDYVVKGCFAMTELGHGTNVRGIETVTTYDPTT 213

Query: 72  DEFAIHSP 78
           +EF I++P
Sbjct: 214 EEFVINTP 218

[Close]

BLAST of CSPI03G21080 vs. NCBI nr
Match: gi|700202645|gb|KGN57778.1| (hypothetical protein Csa_3G298065 [Cucumis sativus])

HSP 1 Score: 143.7 bits (361), Expect = 2.1e-31
Identity = 68/71 (95.77%), Postives = 69/71 (97.18%), Query Frame = 1


Query: 17 IFVPFLKGQSTEEQLQKWLSLTYKMQIIGCYAQTKLGHNVQGLGTTAMFYPKIDEFAIHS 76
          IFVPFLKGQSTEEQLQKWLSLTYKMQIIGCYAQTKLGHNVQGLGTTAMFYPKIDEFAIHS
Sbjct: 7  IFVPFLKGQSTEEQLQKWLSLTYKMQIIGCYAQTKLGHNVQGLGTTAMFYPKIDEFAIHS 66

Query: 77 PTTNLKQNSGS 88
          PTTNLKQ+  S
Sbjct: 67 PTTNLKQSKYS 77

[Close]

BLAST of CSPI03G21080 vs. NCBI nr
Match: gi|659073420|ref|XP_008437050.1| (PREDICTED: peroxisomal acyl-coenzyme A oxidase 1 [Cucumis melo])

HSP 1 Score: 107.8 bits (268), Expect = 1.3e-20
Identity = 54/71 (76.06%), Postives = 57/71 (80.28%), Query Frame = 1


Query: 10  YFFLCLGIFVPFLKGQSTEEQLQKWLSLTYKMQIIGCYAQTKLGH--NVQGLGTTAMFYP 69
           Y  L  G+FVPFLKGQ TEEQL+KWL L YKMQIIGCYAQT+LGH  NVQGL TTA F P
Sbjct: 98  YTDLHWGMFVPFLKGQGTEEQLKKWLPLAYKMQIIGCYAQTELGHGSNVQGLETTATFDP 157

Query: 70  KIDEFAIHSPT 79
           K DEF IHSPT
Sbjct: 158 KTDEFVIHSPT 168

[Close]

BLAST of CSPI03G21080 vs. NCBI nr
Match: gi|778700149|ref|XP_004152392.2| (PREDICTED: peroxisomal acyl-coenzyme A oxidase 1 [Cucumis sativus])

HSP 1 Score: 106.3 bits (264), Expect = 3.7e-20
Identity = 54/71 (76.06%), Postives = 56/71 (78.87%), Query Frame = 1


Query: 10  YFFLCLGIFVPFLKGQSTEEQLQKWLSLTYKMQIIGCYAQTKLGH--NVQGLGTTAMFYP 69
           Y  L  G+FVPFLKGQ TEEQLQKWL L YKMQIIGCYAQT+LGH  NVQ L TTA F P
Sbjct: 98  YTDLHWGMFVPFLKGQGTEEQLQKWLPLAYKMQIIGCYAQTELGHGSNVQWLETTATFDP 157

Query: 70  KIDEFAIHSPT 79
           K DEF IHSPT
Sbjct: 158 KTDEFVIHSPT 168

[Close]

BLAST of CSPI03G21080 vs. NCBI nr
Match: gi|1012344229|gb|KYP55421.1| (Peroxisomal acyl-coenzyme A oxidase 1 [Cajanus cajan])

HSP 1 Score: 104.0 bits (258), Expect = 1.8e-19
Identity = 50/65 (76.92%), Postives = 53/65 (81.54%), Query Frame = 1


Query: 16  GIFVPFLKGQSTEEQLQKWLSLTYKMQIIGCYAQTKLGH--NVQGLGTTAMFYPKIDEFA 75
           G+FVP +KGQ TEEQ QKWL L YKMQIIGCYAQT+LGH  NVQGL TTA F PK DEF 
Sbjct: 105 GMFVPAIKGQGTEEQQQKWLPLAYKMQIIGCYAQTELGHGSNVQGLETTARFDPKTDEFV 164

Query: 76  IHSPT 79
           IHSPT
Sbjct: 165 IHSPT 169

[Close]

BLAST of CSPI03G21080 vs. NCBI nr
Match: gi|470126884|ref|XP_004299412.1| (PREDICTED: peroxisomal acyl-coenzyme A oxidase 1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 102.8 bits (255), Expect = 4.1e-19
Identity = 50/71 (70.42%), Postives = 55/71 (77.46%), Query Frame = 1


Query: 10  YFFLCLGIFVPFLKGQSTEEQLQKWLSLTYKMQIIGCYAQTKLGH--NVQGLGTTAMFYP 69
           Y  L  G+F+PF+KG  TEEQ +KWL L YKMQIIGCYAQT+LGH  NVQGL TTA F P
Sbjct: 98  YMDLHWGMFIPFIKGSGTEEQQKKWLPLAYKMQIIGCYAQTELGHGSNVQGLETTANFDP 157

Query: 70  KIDEFAIHSPT 79
           K DEF IHSPT
Sbjct: 158 KTDEFVIHSPT 168

The following BLAST results are available for this feature:

BLAST of CSPI03G21080 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ACO12_ARATH	2.2e-20	73.85	Putative peroxisomal acyl-coenzyme A oxidase 1.2 OS=Arabidopsis thaliana GN=ACX1...	[more]
ACOX1_ARATH	2.8e-20	70.42	Peroxisomal acyl-coenzyme A oxidase 1 OS=Arabidopsis thaliana GN=ACX1 PE=1 SV=1	[more]
ACOX1_PHACI	5.3e-11	49.32	Peroxisomal acyl-coenzyme A oxidase 1 OS=Phascolarctos cinereus GN=ACOX1 PE=1 SV...	[more]
ACOX1_CAVPO	2.6e-10	49.28	Peroxisomal acyl-coenzyme A oxidase 1 OS=Cavia porcellus GN=ACOX1 PE=2 SV=1	[more]
ACOX1_MOUSE	2.6e-10	46.38	Peroxisomal acyl-coenzyme A oxidase 1 OS=Mus musculus GN=Acox1 PE=1 SV=5	[more]

BLAST of CSPI03G21080 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7J3_CUCSA	1.5e-31	95.77	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G298065 PE=4 SV=1	[more]
A0A151SKZ8_CAJCA	1.3e-19	76.92	Acyl-coenzyme A oxidase OS=Cajanus cajan GN=KK1_001633 PE=3 SV=1	[more]
V4MGR8_EUTSA	3.7e-19	76.92	Acyl-coenzyme A oxidase OS=Eutrema salsugineum GN=EUTSA_v10024621mg PE=3 SV=1	[more]
A0A078I1I6_BRANA	3.7e-19	76.92	Acyl-coenzyme A oxidase OS=Brassica napus GN=BnaA01g18160D PE=3 SV=1	[more]
M4FG66_BRARP	3.7e-19	76.92	Acyl-coenzyme A oxidase OS=Brassica rapa subsp. pekinensis PE=3 SV=1	[more]

BLAST of CSPI03G21080 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G35690.1	1.2e-21	73.85	acyl-CoA oxidase 5	[more]
AT4G16760.1	1.6e-21	70.42	acyl-CoA oxidase 1	[more]
AT1G06290.1	3.2e-06	39.44	acyl-CoA oxidase 3	[more]
AT1G06310.1	9.4e-06	38.24	acyl-CoA oxidase 6	[more]

BLAST of CSPI03G21080 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700202645\|gb\|KGN57778.1\|	2.1e-31	95.77	hypothetical protein Csa_3G298065 [Cucumis sativus]	[more]
gi\|659073420\|ref\|XP_008437050.1\|	1.3e-20	76.06	PREDICTED: peroxisomal acyl-coenzyme A oxidase 1 [Cucumis melo]	[more]
gi\|778700149\|ref\|XP_004152392.2\|	3.7e-20	76.06	PREDICTED: peroxisomal acyl-coenzyme A oxidase 1 [Cucumis sativus]	[more]
gi\|1012344229\|gb\|KYP55421.1\|	1.8e-19	76.92	Peroxisomal acyl-coenzyme A oxidase 1 [Cajanus cajan]	[more]
gi\|470126884\|ref\|XP_004299412.1\|	4.1e-19	70.42	PREDICTED: peroxisomal acyl-coenzyme A oxidase 1 [Fragaria vesca subsp. vesca]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR009100	AcylCoA_DH/oxidase_NM_dom
IPR013786	AcylCoA_DH/ox_N

Vocabulary: **Molecular Function**
Term	Definition
GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors
GO:0050660	flavin adenine dinucleotide binding

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process
GO:0055114	oxidation-reduction process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006637	acyl-CoA metabolic process
biological_process	GO:0006635	fatty acid beta-oxidation
biological_process	GO:0008152	metabolic process
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005777	peroxisome
molecular_function	GO:0003995	acyl-CoA dehydrogenase activity
molecular_function	GO:0003997	acyl-CoA oxidase activity
molecular_function	GO:0050660	flavin adenine dinucleotide binding
molecular_function	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors
molecular_function	GO:0071949	FAD binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G21080.1	CSPI03G21080.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009100	Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain	unknown	SSF56645	Acyl-CoA dehydrogenase NM domain-like	coord: 6..80 score: 2.82
IPR013786	Acyl-CoA dehydrogenase/oxidase, N-terminal	GENE3D	G3DSA:1.10.540.10		coord: 12..44 score: 8.
None	No IPR available	PANTHER	PTHR10909	ELECTRON TRANSPORT OXIDOREDUCTASE	coord: 16..77 score: 3.5
None	No IPR available	PANTHER	PTHR10909:SF250	PEROXISOMAL ACYL-COENZYME A OXIDASE 2	coord: 16..77 score: 3.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI03G21080	CsaV3_3G020890	Cucumber (Chinese Long) v3	cpicucB144
CSPI03G21080	CsGy3G020550	Cucumber (Gy14) v2	cgybcpiB110

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI03G21080	Watermelon (97103) v2	cpiwmbB213
CSPI03G21080	Watermelon (97103) v2	cpiwmbB224
CSPI03G21080	Wax gourd	cpiwgoB271
CSPI03G21080	Wax gourd	cpiwgoB303
CSPI03G21080	Cucurbita maxima (Rimu)	cmacpiB244
CSPI03G21080	Cucurbita maxima (Rimu)	cmacpiB458
CSPI03G21080	Cucurbita moschata (Rifu)	cmocpiB232
CSPI03G21080	Cucurbita moschata (Rifu)	cmocpiB446
CSPI03G21080	Cucumber (Chinese Long) v2	cpicuB120
CSPI03G21080	Melon (DHL92) v3.5.1	cpimeB243
CSPI03G21080	Watermelon (Charleston Gray)	cpiwcgB230
CSPI03G21080	Watermelon (97103) v1	cpiwmB236
CSPI03G21080	Cucurbita pepo (Zucchini)	cpecpiB602
CSPI03G21080	Bottle gourd (USVL1VR-Ls)	cpilsiB203
CSPI03G21080	Bottle gourd (USVL1VR-Ls)	cpilsiB210
CSPI03G21080	Melon (DHL92) v3.6.1	cpimedB240
CSPI03G21080	Silver-seed gourd	carcpiB0519
CSPI03G21080	Silver-seed gourd	carcpiB0520
CSPI03G21080	Silver-seed gourd	carcpiB0798