CSPI03G19600 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI03G19600
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	F-box/WD repeat-containing protein pof10
Location	Chr3 : 15369183 .. 15371696 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGGCGAGTATCTTAGTTTTGTATACTCTCAAGAAACACCAATTGAAAATGGCCTTTTTGATGTTCTTCTTTATTACAATTATCTTCATCCGTTCAAAAGTAGAGAAAATGTAAATCAATCAGCTTGAAGACGAAGACTGTATGTATCCATAACCCAAAACAACACTTCAAATTTCTTCCTCTCTTTCTCTTTTCTTCCCAATTTTCTCCACAATTCTTTGTTTCGTTGGACAGGAATTTGCTGATCATTTCTGATCCACCTTCACATGGAAAAATTGCCAACCGAAATCTGCTTCAAGATTTTCTGTTTCTTGGATTCCCAGAACCTTGCAACCGCACTTCAAGGTCAGCAAGATGTTTTCTTTGAATTAAAATTCTTTTTTCTTTCTTGAATTACATGTGTAATTATTCTTGAATTTGATGGTTTATGAGGTCCTGCCTTTCTGATTGATGTTTTTCTTAGTTTTTGATACAAAGATCTGTTTCTGTGTTCACAATTCTGCTATTAATTCATTGTGTATTCTTGCTAATTTGTGTTGAATTTAACATTCTTCTGTTCATAGGATATTGAACAGAATATATTAATTTCCTGGTTTAATTTTTTTGTAACCTATACATATGTTTCCCTTGGTCTCTTGCTCATTACTTGAGTTATCCCCTGAATTTATATTTAGATTAAAATATCTTGAAGGTATTTGTGGAAGTTAGAATGCTTGGCATGGGGAAACCAGTTTTCAACAAGTTTTATGAAGAATGTCTTGTTTAGAACTCATAAACCCTCCTAACTTAAATCACATCCAATATCATTGGAACTTAATAGACAGAAACGATCGTGTGTATCATCTGTTATGGAACTTTTGCCTAGATCTGATAAAATTTTAGAGAGATCATCTAGGGGGTTTGACATCCCCCCAATCTAATGGTTGGAAGGTTGTATTTTGATCGGTAGCATTGATATGGCAAAGTTCCTAACTGAACCCCCCGTCCCCACTATTATCTAATGCTTCACTTGTGTATATGGTAGCAACGATAAAATAGAAAGGTTGTATTTTGGGTGGTAGCAATGATATACCAAAGTTCCTAATTGAACTCCCCAACCCCACTCTTTCATTTGATACTTCACTCCTTCATTTAATACTTCAGATGGTATATAGGTTGCAATGATAACATAGGAAGGTCGTATTTTGATTGGTAGCAATGATGTACCAAGGTTTCTAATTGATCCCTAGATGAGAAAGGAAGTCCTCTTTCTAACCCAGATGGGATATCCCTTAGTTAAAGATGCCCTTCCCCTTCAACCTATAAGAAGTAAAGAGGTTCTTCGGAGAGTAGAGAGACATGATAATGAGGAACGTCCTTTACCTTTGGTTGTTACTCTCTATTAATAGGACCATTGAACTTTTGACAGTGAACCAACTAAAAGTAGAATTGAATTTCTAAGAGGAAGTTTATGATGCTATTGAACGGCAACACGGGGACCAAGATGAATAGATGAATAAATAAATTACAGGAATGAAAACTGAATTGTCTCTTGAATTTCCTCAACAGTTGATCCCGATTGTCTGTTGATTTATTGTTTCAATTTACCTTTAGCTATTAACACAGCAACCTGCTGCTTGAAGTTTGCAGGAAGTGGAACTCCTTAGCTTCAGACAATATCTTGTGGTCAAATTTATTCAAGGAGAGGTGGGGAGAAGACCATGCTGCATTTTATCACCCAATTGGTTCAAAGTCATGGAAGGATTCATATGAGGTGCAAGATCGATGTGATCGATTTGGACTGTGAGTCGTATTCTTCTTCTTATTACTGGAGACCTACTTCAGTGCTAGACATTTCTGGTTGCAAACACATCCATTATGATTTCTTAATTCTTTGATTGGTTATAATTTGAGATCTTATACAATGCAAGTTTTGAAGCAACGTATTTGTTAAAATTTACCAAAAGGCTAATGTTTTGAAGCAACCTGTTAGCGTTAGCTTAAATATTGTGTCTTCTGGGTTAATGTTTCACAAGAAAATCCATGTTTTATAATACTAAAATTAGAATAGAGATTTGAATCATAATTTATGATTAAAGTATATGTTTATCTGTGCTCCATATGACATGGCAACTGTAACCAGGGGCCTAAGAATTATCCGAGAAGGGAATGACTACTATCTCATTCACCAAGGTGAAATCCAGAGGCACCTAGGTTCAAGAAGACAAAAGAACGGACAGACCAGTTTTCTTCCTTTGAGTTCGAAAAGAGAGTTCCTATCAGAAGGACTTCTCGAAGAAGACAAATCCTGTCGAGGAATTCTGGACAGGATCCTTTTCTTCATTGGAGACTTGGAAGTTGCTTCCACAGATGCAAAGCGTAGCAGGTCTCTGTGAAGCTTCCTTAAGTCAGCAAAAATTATGTGAATTTTATGTATAATATTTATATTTGTTTACGTTGACATTGAATTGTGGCAAATGTAGAATATACATCTCATGTTCTTTTGAAATGCCATAAATAAATTTATCTTCTTCA

mRNA sequence

ATGGAAAAATTGCCAACCGAAATCTGCTTCAAGATTTTCTGTTTCTTGGATTCCCAGAACCTTGCAACCGCACTTCAAGTTTGCAGGAAGTGGAACTCCTTAGCTTCAGACAATATCTTGTGGTCAAATTTATTCAAGGAGAGGTGGGGAGAAGACCATGCTGCATTTTATCACCCAATTGGTTCAAAGTCATGGAAGGATTCATATGAGGTGCAAGATCGATGTGATCGATTTGGACTGGGCCTAAGAATTATCCGAGAAGGGAATGACTACTATCTCATTCACCAAGGTGAAATCCAGAGGCACCTAGGTTCAAGAAGACAAAAGAACGGACAGACCAGTTTTCTTCCTTTGAGTTCGAAAAGAGAGTTCCTATCAGAAGGACTTCTCGAAGAAGACAAATCCTGTCGAGGAATTCTGGACAGGATCCTTTTCTTCATTGGAGACTTGGAAGTTGCTTCCACAGATGCAAAGCGTAGCAGGTCTCTGTGA

Coding sequence (CDS)

ATGGAAAAATTGCCAACCGAAATCTGCTTCAAGATTTTCTGTTTCTTGGATTCCCAGAACCTTGCAACCGCACTTCAAGTTTGCAGGAAGTGGAACTCCTTAGCTTCAGACAATATCTTGTGGTCAAATTTATTCAAGGAGAGGTGGGGAGAAGACCATGCTGCATTTTATCACCCAATTGGTTCAAAGTCATGGAAGGATTCATATGAGGTGCAAGATCGATGTGATCGATTTGGACTGGGCCTAAGAATTATCCGAGAAGGGAATGACTACTATCTCATTCACCAAGGTGAAATCCAGAGGCACCTAGGTTCAAGAAGACAAAAGAACGGACAGACCAGTTTTCTTCCTTTGAGTTCGAAAAGAGAGTTCCTATCAGAAGGACTTCTCGAAGAAGACAAATCCTGTCGAGGAATTCTGGACAGGATCCTTTTCTTCATTGGAGACTTGGAAGTTGCTTCCACAGATGCAAAGCGTAGCAGGTCTCTGTGA

Homology

[Close]

BLAST of CSPI03G19600 vs. TrEMBL
Match: A0A0A0LAG9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G238130 PE=4 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 3.9e-91
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 1


Query: 1   MEKLPTEICFKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHPI 60
           MEKLPTEICFKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHPI
Sbjct: 1   MEKLPTEICFKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHPI 60

Query: 61  GSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQRHLGSRRQKNGQTSFLPLSS 120
           GSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQRHLGSRRQKNGQTSFLPLSS
Sbjct: 61  GSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQRHLGSRRQKNGQTSFLPLSS 120

Query: 121 KREFLSEGLLEEDKSCRGILDRILFFIGDLEVASTDAKRSRSL 164
           KREFLSEGLLEEDKSCRGILDRILFFIGDLEVASTDAKRSRSL
Sbjct: 121 KREFLSEGLLEEDKSCRGILDRILFFIGDLEVASTDAKRSRSL 163

[Close]

BLAST of CSPI03G19600 vs. TrEMBL
Match: C6T1A4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_04G232600 PE=2 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 3.4e-63
Identity = 119/163 (73.01%), Postives = 134/163 (82.21%), Query Frame = 1


Query: 1   MEKLPTEICFKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHPI 60
           ME LP EIC KIFC LD Q+LA A QVCRKW  +ASDN LWSNLFKERWGEDHAAFY P+
Sbjct: 1   MEMLPLEICMKIFCLLDYQHLAVAQQVCRKWKLVASDNTLWSNLFKERWGEDHAAFYAPM 60

Query: 61  GSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQRHLGSRRQKNGQT--SFLPL 120
           GSKSWKD YEVQDRCDR GLG++IIREG DYYL+HQGEIQRHLGSR+    +T  +   L
Sbjct: 61  GSKSWKDVYEVQDRCDRIGLGMKIIREGIDYYLVHQGEIQRHLGSRKNHEKETGHNSHTL 120

Query: 121 SSKREFLSEGLLEEDKSCRGILDRILFFIGDLEVASTDAKRSR 162
           +S+ +F  EG L E++SCRGILDRILFFIGDLEVAS +AKRSR
Sbjct: 121 NSEIDFNGEGSLAEERSCRGILDRILFFIGDLEVASAEAKRSR 163

[Close]

BLAST of CSPI03G19600 vs. TrEMBL
Match: A0A0B2QHY0_GLYSO (F-box/WD repeat-containing protein pof10 OS=Glycine soja GN=glysoja_027780 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 3.4e-63
Identity = 119/163 (73.01%), Postives = 134/163 (82.21%), Query Frame = 1


Query: 1   MEKLPTEICFKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHPI 60
           ME LP EIC KIFC LD Q+LA A QVCRKW  +ASDN LWSNLFKERWGEDHAAFY P+
Sbjct: 1   MEMLPLEICMKIFCLLDYQHLAVAQQVCRKWKLVASDNTLWSNLFKERWGEDHAAFYAPM 60

Query: 61  GSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQRHLGSRRQKNGQT--SFLPL 120
           GSKSWKD YEVQDRCDR GLG++IIREG DYYL+HQGEIQRHLGSR+    +T  +   L
Sbjct: 61  GSKSWKDVYEVQDRCDRIGLGMKIIREGIDYYLVHQGEIQRHLGSRKNHEKETGHNSHTL 120

Query: 121 SSKREFLSEGLLEEDKSCRGILDRILFFIGDLEVASTDAKRSR 162
           +S+ +F  EG L E++SCRGILDRILFFIGDLEVAS +AKRSR
Sbjct: 121 NSEIDFNGEGSLAEERSCRGILDRILFFIGDLEVASAEAKRSR 163

[Close]

BLAST of CSPI03G19600 vs. TrEMBL
Match: A0A0B2QPC1_GLYSO (F-box/WD repeat-containing protein pof10 OS=Glycine soja GN=glysoja_015638 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 5.5e-61
Identity = 116/163 (71.17%), Postives = 131/163 (80.37%), Query Frame = 1


Query: 1   MEKLPTEICFKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHPI 60
           ME+LP EIC KIF  LD Q+LA A QVCRKW  +AS+N LWS+LFKERWGEDHAAFY P+
Sbjct: 1   MERLPLEICMKIFYLLDYQHLAVAQQVCRKWKLVASENALWSDLFKERWGEDHAAFYAPV 60

Query: 61  GSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQRHLGSRRQKNGQTSFL--PL 120
           GSKSWKD YEVQDRCDR G+GL+IIREG DYYLIHQGEIQRHLGSR+    +       L
Sbjct: 61  GSKSWKDVYEVQDRCDRIGVGLKIIREGIDYYLIHQGEIQRHLGSRKNHEKEIGHCSNTL 120

Query: 121 SSKREFLSEGLLEEDKSCRGILDRILFFIGDLEVASTDAKRSR 162
           +S+  F  EG L E++SCRGILDRILFFIGDLEVAS +AKRSR
Sbjct: 121 NSESNFNGEGSLAEERSCRGILDRILFFIGDLEVASAEAKRSR 163

[Close]

BLAST of CSPI03G19600 vs. TrEMBL
Match: I1KAW6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G132400 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 5.5e-61
Identity = 116/163 (71.17%), Postives = 131/163 (80.37%), Query Frame = 1


Query: 1   MEKLPTEICFKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHPI 60
           ME+LP EIC KIF  LD Q+LA A QVCRKW  +AS+N LWS+LFKERWGEDHAAFY P+
Sbjct: 1   MERLPLEICMKIFYLLDYQHLAVAQQVCRKWKLVASENALWSDLFKERWGEDHAAFYAPV 60

Query: 61  GSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQRHLGSRRQKNGQTSFL--PL 120
           GSKSWKD YEVQDRCDR G+GL+IIREG DYYLIHQGEIQRHLGSR+    +       L
Sbjct: 61  GSKSWKDVYEVQDRCDRIGVGLKIIREGIDYYLIHQGEIQRHLGSRKNHEKEIGHCSNTL 120

Query: 121 SSKREFLSEGLLEEDKSCRGILDRILFFIGDLEVASTDAKRSR 162
           +S+  F  EG L E++SCRGILDRILFFIGDLEVAS +AKRSR
Sbjct: 121 NSESNFNGEGSLAEERSCRGILDRILFFIGDLEVASAEAKRSR 163

[Close]

BLAST of CSPI03G19600 vs. NCBI nr
Match: gi|449456999|ref|XP_004146236.1| (PREDICTED: F-box/WD repeat-containing protein pof1 [Cucumis sativus])

HSP 1 Score: 342.0 bits (876), Expect = 5.6e-91
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 1


Query: 1   MEKLPTEICFKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHPI 60
           MEKLPTEICFKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHPI
Sbjct: 1   MEKLPTEICFKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHPI 60

Query: 61  GSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQRHLGSRRQKNGQTSFLPLSS 120
           GSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQRHLGSRRQKNGQTSFLPLSS
Sbjct: 61  GSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQRHLGSRRQKNGQTSFLPLSS 120

Query: 121 KREFLSEGLLEEDKSCRGILDRILFFIGDLEVASTDAKRSRSL 164
           KREFLSEGLLEEDKSCRGILDRILFFIGDLEVASTDAKRSRSL
Sbjct: 121 KREFLSEGLLEEDKSCRGILDRILFFIGDLEVASTDAKRSRSL 163

[Close]

BLAST of CSPI03G19600 vs. NCBI nr
Match: gi|659111964|ref|XP_008455999.1| (PREDICTED: uncharacterized protein LOC103496056 [Cucumis melo])

HSP 1 Score: 334.3 bits (856), Expect = 1.2e-88
Identity = 160/163 (98.16%), Postives = 160/163 (98.16%), Query Frame = 1


Query: 1   MEKLPTEICFKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHPI 60
           MEKLPTEIC KIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGED AAFYHP 
Sbjct: 1   MEKLPTEICLKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDQAAFYHPS 60

Query: 61  GSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQRHLGSRRQKNGQTSFLPLSS 120
           GSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQRHLGSRRQKNGQTSFLPLSS
Sbjct: 61  GSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQRHLGSRRQKNGQTSFLPLSS 120

Query: 121 KREFLSEGLLEEDKSCRGILDRILFFIGDLEVASTDAKRSRSL 164
           KREFLSEGLLEEDKSCRGILDRILFFIGDLEVASTDAKRSRSL
Sbjct: 121 KREFLSEGLLEEDKSCRGILDRILFFIGDLEVASTDAKRSRSL 163

[Close]

BLAST of CSPI03G19600 vs. NCBI nr
Match: gi|1009169654|ref|XP_015865782.1| (PREDICTED: uncharacterized protein LOC107403413 [Ziziphus jujuba])

HSP 1 Score: 260.4 bits (664), Expect = 2.1e-66
Identity = 123/167 (73.65%), Postives = 138/167 (82.63%), Query Frame = 1


Query: 1   MEKLPTEICFKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHPI 60
           ME+LP +IC KIFCFLD QNLATA QVCRKW  LASDN LWS LFKERWG DHAAFY P+
Sbjct: 1   MERLPVDICLKIFCFLDHQNLATAQQVCRKWKFLASDNNLWSTLFKERWGRDHAAFYAPV 60

Query: 61  GSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQRHLGSRRQKNGQTSFLPLSS 120
            SK WKD YEVQDRCDR GLGL+I+REG+DYYL+HQGEIQR+LGSRRQ+ G  +  PL  
Sbjct: 61  SSKLWKDVYEVQDRCDRIGLGLKIVREGSDYYLVHQGEIQRYLGSRRQRKGVNNGSPLGL 120

Query: 121 KREFLSEGLLEE----DKSCRGILDRILFFIGDLEVASTDAKRSRSL 164
           KRE + EG L+E    ++SCRGILD+ILFFIGDLEVASTDAKRSR L
Sbjct: 121 KREVIGEGSLQEEDSNEESCRGILDKILFFIGDLEVASTDAKRSRVL 167

[Close]

BLAST of CSPI03G19600 vs. NCBI nr
Match: gi|351723261|ref|NP_001235993.1| (uncharacterized protein LOC100500296 [Glycine max])

HSP 1 Score: 249.2 bits (635), Expect = 4.9e-63
Identity = 119/163 (73.01%), Postives = 134/163 (82.21%), Query Frame = 1


Query: 1   MEKLPTEICFKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHPI 60
           ME LP EIC KIFC LD Q+LA A QVCRKW  +ASDN LWSNLFKERWGEDHAAFY P+
Sbjct: 1   MEMLPLEICMKIFCLLDYQHLAVAQQVCRKWKLVASDNTLWSNLFKERWGEDHAAFYAPM 60

Query: 61  GSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQRHLGSRRQKNGQT--SFLPL 120
           GSKSWKD YEVQDRCDR GLG++IIREG DYYL+HQGEIQRHLGSR+    +T  +   L
Sbjct: 61  GSKSWKDVYEVQDRCDRIGLGMKIIREGIDYYLVHQGEIQRHLGSRKNHEKETGHNSHTL 120

Query: 121 SSKREFLSEGLLEEDKSCRGILDRILFFIGDLEVASTDAKRSR 162
           +S+ +F  EG L E++SCRGILDRILFFIGDLEVAS +AKRSR
Sbjct: 121 NSEIDFNGEGSLAEERSCRGILDRILFFIGDLEVASAEAKRSR 163

[Close]

BLAST of CSPI03G19600 vs. NCBI nr
Match: gi|734381749|gb|KHN23336.1| (F-box/WD repeat-containing protein pof10 [Glycine soja])

HSP 1 Score: 241.9 bits (616), Expect = 7.9e-61
Identity = 116/163 (71.17%), Postives = 131/163 (80.37%), Query Frame = 1


Query: 1   MEKLPTEICFKIFCFLDSQNLATALQVCRKWNSLASDNILWSNLFKERWGEDHAAFYHPI 60
           ME+LP EIC KIF  LD Q+LA A QVCRKW  +AS+N LWS+LFKERWGEDHAAFY P+
Sbjct: 1   MERLPLEICMKIFYLLDYQHLAVAQQVCRKWKLVASENALWSDLFKERWGEDHAAFYAPV 60

Query: 61  GSKSWKDSYEVQDRCDRFGLGLRIIREGNDYYLIHQGEIQRHLGSRRQKNGQTSFL--PL 120
           GSKSWKD YEVQDRCDR G+GL+IIREG DYYLIHQGEIQRHLGSR+    +       L
Sbjct: 61  GSKSWKDVYEVQDRCDRIGVGLKIIREGIDYYLIHQGEIQRHLGSRKNHEKEIGHCSNTL 120

Query: 121 SSKREFLSEGLLEEDKSCRGILDRILFFIGDLEVASTDAKRSR 162
           +S+  F  EG L E++SCRGILDRILFFIGDLEVAS +AKRSR
Sbjct: 121 NSESNFNGEGSLAEERSCRGILDRILFFIGDLEVASAEAKRSR 163

The following BLAST results are available for this feature:

BLAST of CSPI03G19600 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI03G19600 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAG9_CUCSA	3.9e-91	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G238130 PE=4 SV=1	[more]
C6T1A4_SOYBN	3.4e-63	73.01	Uncharacterized protein OS=Glycine max GN=GLYMA_04G232600 PE=2 SV=1	[more]
A0A0B2QHY0_GLYSO	3.4e-63	73.01	F-box/WD repeat-containing protein pof10 OS=Glycine soja GN=glysoja_027780 PE=4 ...	[more]
A0A0B2QPC1_GLYSO	5.5e-61	71.17	F-box/WD repeat-containing protein pof10 OS=Glycine soja GN=glysoja_015638 PE=4 ...	[more]
I1KAW6_SOYBN	5.5e-61	71.17	Uncharacterized protein OS=Glycine max GN=GLYMA_06G132400 PE=4 SV=1	[more]

BLAST of CSPI03G19600 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CSPI03G19600 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449456999\|ref\|XP_004146236.1\|	5.6e-91	100.00	PREDICTED: F-box/WD repeat-containing protein pof1 [Cucumis sativus]	[more]
gi\|659111964\|ref\|XP_008455999.1\|	1.2e-88	98.16	PREDICTED: uncharacterized protein LOC103496056 [Cucumis melo]	[more]
gi\|1009169654\|ref\|XP_015865782.1\|	2.1e-66	73.65	PREDICTED: uncharacterized protein LOC107403413 [Ziziphus jujuba]	[more]
gi\|351723261\|ref\|NP_001235993.1\|	4.9e-63	73.01	uncharacterized protein LOC100500296 [Glycine max]	[more]
gi\|734381749\|gb\|KHN23336.1\|	7.9e-61	71.17	F-box/WD repeat-containing protein pof10 [Glycine soja]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001810	F-box_dom
IPR001810	F-box_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G19600.2	CSPI03G19600.2	mRNA
CSPI03G19600.1	CSPI03G19600.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 2..45 score: 3.5
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 4..44 score: 2.
IPR001810	F-box domain	PROFILE	PS50181	FBOX	coord: 1..44 score: 14
IPR001810	F-box domain	unknown	SSF81383	F-box domain	coord: 2..73 score: 1.15
None	No IPR available	GENE3D	G3DSA:1.20.1280.50		coord: 2..76 score: 6.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI03G19600	Cla004276	Watermelon (97103) v1	cpiwmB242
CSPI03G19600	Csa3G238130	Cucumber (Chinese Long) v2	cpicuB120
CSPI03G19600	MELO3C019381	Melon (DHL92) v3.5.1	cpimeB241
CSPI03G19600	ClCG05G009120	Watermelon (Charleston Gray)	cpiwcgB237
CSPI03G19600	MELO3C019381.2	Melon (DHL92) v3.6.1	cpimedB239
CSPI03G19600	CsaV3_3G019660	Cucumber (Chinese Long) v3	cpicucB144
CSPI03G19600	Cla97C05G091450	Watermelon (97103) v2	cpiwmbB221
CSPI03G19600	Bhi01G001133	Wax gourd	cpiwgoB283
CSPI03G19600	Cucsa.032350	Cucumber (Gy14) v1	cgycpiB003
CSPI03G19600	CmaCh16G000320	Cucurbita maxima (Rimu)	cmacpiB327
CSPI03G19600	CmoCh16G000370	Cucurbita moschata (Rifu)	cmocpiB318
CSPI03G19600	Carg15049	Silver-seed gourd	carcpiB1024

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI03G19600	Cucumber (Chinese Long) v3	cpicucB166
CSPI03G19600	Watermelon (97103) v2	cpiwmbB177
CSPI03G19600	Wax gourd	cpiwgoB263
CSPI03G19600	Wild cucumber (PI 183967)	cpicpiB114
CSPI03G19600	Cucumber (Gy14) v1	cgycpiB321
CSPI03G19600	Cucurbita maxima (Rimu)	cmacpiB290
CSPI03G19600	Cucurbita maxima (Rimu)	cmacpiB417
CSPI03G19600	Cucurbita moschata (Rifu)	cmocpiB280
CSPI03G19600	Cucurbita moschata (Rifu)	cmocpiB405
CSPI03G19600	Cucurbita moschata (Rifu)	cmocpiB601
CSPI03G19600	Cucumber (Chinese Long) v2	cpicuB139
CSPI03G19600	Melon (DHL92) v3.5.1	cpimeB169
CSPI03G19600	Watermelon (Charleston Gray)	cpiwcgB207
CSPI03G19600	Watermelon (97103) v1	cpiwmB258
CSPI03G19600	Cucurbita pepo (Zucchini)	cpecpiB032
CSPI03G19600	Cucurbita pepo (Zucchini)	cpecpiB209
CSPI03G19600	Cucurbita pepo (Zucchini)	cpecpiB723
CSPI03G19600	Bottle gourd (USVL1VR-Ls)	cpilsiB151
CSPI03G19600	Bottle gourd (USVL1VR-Ls)	cpilsiB209
CSPI03G19600	Melon (DHL92) v3.6.1	cpimedB160
CSPI03G19600	Cucumber (Gy14) v2	cgybcpiB110
CSPI03G19600	Cucumber (Gy14) v2	cgybcpiB210
CSPI03G19600	Silver-seed gourd	carcpiB0573