CSPI03G19090 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G19090
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionFerredoxin
LocationChr3 : 14841980 .. 14843076 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTCACATTTTGAAACCAAATCTTTGGAAGGATAAGAATCCACAACCATTACCATTCATTGCCAAAAGATAAGGCGTTAACTCACATCCACACGCTCTCTATTTCACTCTCCACGTTATAGCCACACGACCCAAAAATCCTCTTTAAAAAACCCTCTTCACTCTCTCAATTCCATTTCATCTCATCTCATCTCCAATCCAACACAAGAACAATAAGAAAAATGAGCAGCACCACTGCAATCACCTCCCCATTTCCGGCCACCTCCTTCATCCGTCGGAATCCTACCGGTGGAGTGAGTTTCAAGCCATTTCCCAACATGGGTGAGTCTCTGTACGGGCTGAAACACCGCGGCGGACGACTGGCGATGAAGGCATACAAGGTGAAACTCATAACCCCAGATGGAGAGAAAACGGTTGAATGTGATGCTGATCTTTACATTTTGGATGCGGCTGAGGAAAGTGGGCTTGATCTTCCTTACTCTTGCAGAGCTGGGGCTTGTTCTTCATGCGTTGGGAAAGTGGTATCAGGGAAATTGGATCAATCTGATCAGAGTTTTCTTGATGATGAGCAAGTGGCTGAAGGTTGGGTTTTAACTTGTGTTGCTAGGCCTGAGTCTGATCTTGTAATTGAGACTCACAAGGAGGATTCCTTTGCTGGTTAAAACAGAGGAACAAGAAGGGATTAAACTTATTTTTTCTTTTTATCTTTTCTATCTTTGTTGATGAGAGTAAGCATAATGGACATTGTTTTCTTAGCTTGATGATGATGATGATGATGATGATGATATCTCTCTTTTAAAGTGTTTGTTGAAAATTGTATTGTTCATTACTGGTTTAAGTTTATTTACAACTCGGGTTTTGTTTATCTGTTGTTGGGTTCTTAACTTTCATTTCTTTTTGGCTTCTTTACTTTCATGTGAATGATACTGTCTTTTAGCTTCACGTATATCACTTTAGCTCTCCATTGTAAATCATTTTGTTTATTGTTTTATTTATATGTTGTTGGGTGGTTGTTATTTATTTCTCTTTGATATCCAAGTTGTGAATGATACTATAGATTAATCCATCTTTATTTTGGGGAATGGTAAAAAATAGTCC

mRNA sequence

ATGAGCAGCACCACTGCAATCACCTCCCCATTTCCGGCCACCTCCTTCATCCGTCGGAATCCTACCGGTGGAGTGAGTTTCAAGCCATTTCCCAACATGGGTGAGTCTCTGTACGGGCTGAAACACCGCGGCGGACGACTGGCGATGAAGGCATACAAGGTGAAACTCATAACCCCAGATGGAGAGAAAACGGTTGAATGTGATGCTGATCTTTACATTTTGGATGCGGCTGAGGAAAGTGGGCTTGATCTTCCTTACTCTTGCAGAGCTGGGGCTTGTTCTTCATGCGTTGGGAAAGTGGTATCAGGGAAATTGGATCAATCTGATCAGAGTTTTCTTGATGATGAGCAAGTGGCTGAAGGTTGGGTTTTAACTTGTGTTGCTAGGCCTGAGTCTGATCTTGTAATTGAGACTCACAAGGAGGATTCCTTTGCTGGTTAA

Coding sequence (CDS)

ATGAGCAGCACCACTGCAATCACCTCCCCATTTCCGGCCACCTCCTTCATCCGTCGGAATCCTACCGGTGGAGTGAGTTTCAAGCCATTTCCCAACATGGGTGAGTCTCTGTACGGGCTGAAACACCGCGGCGGACGACTGGCGATGAAGGCATACAAGGTGAAACTCATAACCCCAGATGGAGAGAAAACGGTTGAATGTGATGCTGATCTTTACATTTTGGATGCGGCTGAGGAAAGTGGGCTTGATCTTCCTTACTCTTGCAGAGCTGGGGCTTGTTCTTCATGCGTTGGGAAAGTGGTATCAGGGAAATTGGATCAATCTGATCAGAGTTTTCTTGATGATGAGCAAGTGGCTGAAGGTTGGGTTTTAACTTGTGTTGCTAGGCCTGAGTCTGATCTTGTAATTGAGACTCACAAGGAGGATTCCTTTGCTGGTTAA
Homology
[Close]
BLAST of CSPI03G19090 vs. Swiss-Prot
Match: FER1_ARATH (Ferredoxin-1, chloroplastic OS=Arabidopsis thaliana GN=FD1 PE=1 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.1e-45
Identity = 94/146 (64.38%), Postives = 118/146 (80.82%), Query Frame = 1 

Query: 3   STTAITSPFPATSFIRRNPTG-GVSFKPFPNMGESLYGLKH---RGGRL-AMKAYKVKLI 62
           ++TA++S   +TSF+RR  T   +   PF N  +SL+GLK    RGGR+ AM  YKVK I
Sbjct: 2   ASTALSSAIVSTSFLRRQQTPISLRSLPFANT-QSLFGLKSSTARGGRVTAMATYKVKFI 61

Query: 63  TPDGEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQ 122
           TP+GE+ VEC+ D+Y+LDAAEE+GLDLPYSCRAG+CSSC GKVVSG +DQSDQSFLDDEQ
Sbjct: 62  TPEGEQEVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQ 121

Query: 123 VAEGWVLTCVARPESDLVIETHKEDS 144
           ++EG+VLTCVA P SD+VIETHKE++
Sbjct: 122 MSEGYVLTCVAYPTSDVVIETHKEEA 146

[Close]
BLAST of CSPI03G19090 vs. Swiss-Prot
Match: FER2_ARATH (Ferredoxin-2, chloroplastic OS=Arabidopsis thaliana GN=FD2 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 5.4e-45
Identity = 92/145 (63.45%), Postives = 114/145 (78.62%), Query Frame = 1 

Query: 3   STTAITSPFPATSFIRRNPTGGVSFKPFPNMG-ESLYGLKH---RGGRL-AMKAYKVKLI 62
           ++TA++S    TSFIRR+P   +S +  P+   +SL+GLK    RGGR+ AM  YKVK I
Sbjct: 2   ASTALSSAIVGTSFIRRSPAP-ISLRSLPSANTQSLFGLKSGTARGGRVTAMATYKVKFI 61

Query: 63  TPDGEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQ 122
           TP+GE  VECD D+Y+LDAAEE+G+DLPYSCRAG+CSSC GKVVSG +DQSDQSFLDDEQ
Sbjct: 62  TPEGELEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDEQ 121

Query: 123 VAEGWVLTCVARPESDLVIETHKED 143
           + EG+VLTC A P SD+ IETHKE+
Sbjct: 122 IGEGFVLTCAAYPTSDVTIETHKEE 145

[Close]
BLAST of CSPI03G19090 vs. Swiss-Prot
Match: FER_CAPAN (Ferredoxin, chloroplastic OS=Capsicum annuum GN=AP1 PE=1 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 4.8e-41
Identity = 81/143 (56.64%), Postives = 106/143 (74.13%), Query Frame = 1 

Query: 6   AITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKH-RGGRLA-MKAYKVKLITPDGEK 65
           ++++   +TSF+ R P    S KP PN+GE+L+GLK   GG++  M +YKVKLITPDG  
Sbjct: 3   SVSATMISTSFMPRKPAV-TSLKPIPNVGEALFGLKSANGGKVTCMASYKVKLITPDGPI 62

Query: 66  TVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAEGWV 125
             +C  ++YILD AEE+G DLPYSCRAG+CSSC GK+  G +DQ+D +FLDD+Q+ EGWV
Sbjct: 63  EFDCPDNVYILDQAEEAGHDLPYSCRAGSCSSCAGKIAGGAVDQTDGNFLDDDQLEEGWV 122

Query: 126 LTCVARPESDLVIETHKEDSFAG 147
           LTCVA P+SD+ IETHKE    G
Sbjct: 123 LTCVAYPQSDVTIETHKEAELVG 144

[Close]
BLAST of CSPI03G19090 vs. Swiss-Prot
Match: FER1_MESCR (Ferredoxin-1, chloroplastic OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 9.9e-39
Identity = 78/144 (54.17%), Postives = 104/144 (72.22%), Query Frame = 1 

Query: 2   SSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKH---RGGRLAMKAYKVKLIT 61
           ++T A++    +T+F  + P    +     N+G +L+GLK    RG   AM AYKV L+T
Sbjct: 3   ATTAALSGATMSTAFAPKTPPMTAALPT--NVGRALFGLKSSASRGRVTAMAAYKVTLVT 62

Query: 62  PDGEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQV 121
           P+G++ +EC  D+YILDAAEE+G+DLPYSCRAG+CSSC GKV SG ++Q D SFLDD+Q+
Sbjct: 63  PEGKQELECPDDVYILDAAEEAGIDLPYSCRAGSCSSCAGKVTSGSVNQDDGSFLDDDQI 122

Query: 122 AEGWVLTCVARPESDLVIETHKED 143
            EGWVLTCVA P  D+ IETHKE+
Sbjct: 123 KEGWVLTCVAYPTGDVTIETHKEE 144

[Close]
BLAST of CSPI03G19090 vs. Swiss-Prot
Match: FER1_SPIOL (Ferredoxin-1, chloroplastic OS=Spinacia oleracea GN=PETF PE=1 SV=2)

HSP 1 Score: 160.6 bits (405), Expect = 1.3e-38
Identity = 79/142 (55.63%), Postives = 98/142 (69.01%), Query Frame = 1 

Query: 3   STTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLK--HRGGRLAMKAYKVKLITPD 62
           + T  T    AT+F+ +     +      N G SL+GLK   RGGR+ M AYKV L+TP 
Sbjct: 2   AATTTTMMGMATTFVPKPQAPPMMAALPSNTGRSLFGLKTGSRGGRMTMAAYKVTLVTPT 61

Query: 63  GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE 122
           G    +C  D+YILDAAEE G+DLPYSCRAG+CSSC GK+ +G L+Q DQSFLDD+Q+ E
Sbjct: 62  GNVEFQCPDDVYILDAAEEEGIDLPYSCRAGSCSSCAGKLKTGSLNQDDQSFLDDDQIDE 121

Query: 123 GWVLTCVARPESDLVIETHKED 143
           GWVLTC A P SD+ IETHKE+
Sbjct: 122 GWVLTCAAYPVSDVTIETHKEE 143

[Close]
BLAST of CSPI03G19090 vs. TrEMBL
Match: A0A0A0L764_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G222800 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 1.2e-78
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 1 

Query: 1   MSSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKHRGGRLAMKAYKVKLITPD 60
           MSSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKHRGGRLAMKAYKVKLITPD
Sbjct: 1   MSSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKHRGGRLAMKAYKVKLITPD 60

Query: 61  GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE 120
           GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE
Sbjct: 61  GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE 120

Query: 121 GWVLTCVARPESDLVIETHKEDSFAG 147
           GWVLTCVARPESDLVIETHKEDSFAG
Sbjct: 121 GWVLTCVARPESDLVIETHKEDSFAG 146

[Close]
BLAST of CSPI03G19090 vs. TrEMBL
Match: A0A067L2U1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04972 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 1.7e-45
Identity = 92/142 (64.79%), Postives = 116/142 (81.69%), Query Frame = 1 

Query: 3   STTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKH-RGGRL-AMKAYKVKLITPD 62
           ++TA++S   +TSF RR P    S +  PN+G++L+GLK  RGG+  AM +YKVKL+TP+
Sbjct: 2   ASTALSSAMVSTSFTRRQPV--TSLRALPNVGQALFGLKSSRGGKFKAMASYKVKLLTPE 61

Query: 63  GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE 122
           GEK +EC  D+YILDAAEE+G+DLPYSCRAG+CSSC GKVV G++DQSD SFLDDEQ+ E
Sbjct: 62  GEKVIECPDDVYILDAAEEAGVDLPYSCRAGSCSSCAGKVVGGEVDQSDGSFLDDEQMEE 121

Query: 123 GWVLTCVARPESDLVIETHKED 143
           GWVLTCVA P SD+VIETHKE+
Sbjct: 122 GWVLTCVAYPTSDVVIETHKEE 141

[Close]
BLAST of CSPI03G19090 vs. TrEMBL
Match: A0A0G2UGP8_9ROSA (Leaf L-A-like ferredoxin OS=Pyrus betulifolia GN=FD1 PE=2 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.1e-44
Identity = 90/146 (61.64%), Postives = 115/146 (78.77%), Query Frame = 1 

Query: 2   SSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLK-HRGGRLAMKAYKVKLITPD 61
           ++  A++S   +TSFIR  P    S +  PN+G++L+GLK +RGGR+AM AYKVKLITP+
Sbjct: 4   TAAAALSSTMVSTSFIRGQPM--TSLRLSPNVGQALFGLKANRGGRVAMAAYKVKLITPE 63

Query: 62  GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE 121
           G +  EC  D+YILDAAEE+G+DLPYSCRAG+CSSC GKVVSG +DQSDQSFLDD+Q+  
Sbjct: 64  GPQEFECPEDVYILDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDDQIGG 123

Query: 122 GWVLTCVARPESDLVIETHKEDSFAG 147
           G+VLTCVA P SD+ +ETHKE+   G
Sbjct: 124 GFVLTCVAYPSSDVTLETHKEEELTG 147

[Close]
BLAST of CSPI03G19090 vs. TrEMBL
Match: V4T673_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002793mg PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 1.9e-44
Identity = 92/142 (64.79%), Postives = 112/142 (78.87%), Query Frame = 1 

Query: 7   ITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLK-HRGGRL-AMKAYKVKLITPDGEKT 66
           ++S   +TSFIR  PT   S K  PNMG++++GLK +RGGR+ AM  YKVKLITP GE+ 
Sbjct: 4   LSSAMVSTSFIRSKPTA-TSLKAMPNMGQAMFGLKANRGGRVVAMATYKVKLITPGGEEE 63

Query: 67  VECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAEGWVL 126
           + C  D +ILDAAEE+GLDLPYSCRAGACSSC GKVVSG +DQS+QSFLDD+Q+ EG+VL
Sbjct: 64  INCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVL 123

Query: 127 TCVARPESDLVIETHKEDSFAG 147
           TC A P SD+ IETHKE+  AG
Sbjct: 124 TCAAYPTSDVTIETHKEEELAG 144

[Close]
BLAST of CSPI03G19090 vs. TrEMBL
Match: A0A067E882_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032269mg PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 2.5e-44
Identity = 92/142 (64.79%), Postives = 112/142 (78.87%), Query Frame = 1 

Query: 7   ITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLK-HRGGRL-AMKAYKVKLITPDGEKT 66
           ++S   +TSFIR  PT   S K  PNMG++++GLK +RGGR+ AM  YKVKLITP GE+ 
Sbjct: 4   LSSAMVSTSFIRSKPTA-TSLKAMPNMGQAIFGLKANRGGRVVAMATYKVKLITPGGEEE 63

Query: 67  VECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAEGWVL 126
           + C  D +ILDAAEE+GLDLPYSCRAGACSSC GKVVSG +DQS+QSFLDD+Q+ EG+VL
Sbjct: 64  INCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVL 123

Query: 127 TCVARPESDLVIETHKEDSFAG 147
           TC A P SD+ IETHKE+  AG
Sbjct: 124 TCAAYPTSDVTIETHKEEELAG 144

[Close]
BLAST of CSPI03G19090 vs. TAIR10
Match: AT1G10960.1 (AT1G10960.1 ferredoxin 1)

HSP 1 Score: 184.1 bits (466), Expect = 6.2e-47
Identity = 94/146 (64.38%), Postives = 118/146 (80.82%), Query Frame = 1 

Query: 3   STTAITSPFPATSFIRRNPTG-GVSFKPFPNMGESLYGLKH---RGGRL-AMKAYKVKLI 62
           ++TA++S   +TSF+RR  T   +   PF N  +SL+GLK    RGGR+ AM  YKVK I
Sbjct: 2   ASTALSSAIVSTSFLRRQQTPISLRSLPFANT-QSLFGLKSSTARGGRVTAMATYKVKFI 61

Query: 63  TPDGEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQ 122
           TP+GE+ VEC+ D+Y+LDAAEE+GLDLPYSCRAG+CSSC GKVVSG +DQSDQSFLDDEQ
Sbjct: 62  TPEGEQEVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQ 121

Query: 123 VAEGWVLTCVARPESDLVIETHKEDS 144
           ++EG+VLTCVA P SD+VIETHKE++
Sbjct: 122 MSEGYVLTCVAYPTSDVVIETHKEEA 146

[Close]
BLAST of CSPI03G19090 vs. TAIR10
Match: AT1G60950.1 (AT1G60950.1 2Fe-2S ferredoxin-like superfamily protein)

HSP 1 Score: 181.8 bits (460), Expect = 3.1e-46
Identity = 92/145 (63.45%), Postives = 114/145 (78.62%), Query Frame = 1 

Query: 3   STTAITSPFPATSFIRRNPTGGVSFKPFPNMG-ESLYGLKH---RGGRL-AMKAYKVKLI 62
           ++TA++S    TSFIRR+P   +S +  P+   +SL+GLK    RGGR+ AM  YKVK I
Sbjct: 2   ASTALSSAIVGTSFIRRSPAP-ISLRSLPSANTQSLFGLKSGTARGGRVTAMATYKVKFI 61

Query: 63  TPDGEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQ 122
           TP+GE  VECD D+Y+LDAAEE+G+DLPYSCRAG+CSSC GKVVSG +DQSDQSFLDDEQ
Sbjct: 62  TPEGELEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDEQ 121

Query: 123 VAEGWVLTCVARPESDLVIETHKED 143
           + EG+VLTC A P SD+ IETHKE+
Sbjct: 122 IGEGFVLTCAAYPTSDVTIETHKEE 145

[Close]
BLAST of CSPI03G19090 vs. TAIR10
Match: AT2G27510.1 (AT2G27510.1 ferredoxin 3)

HSP 1 Score: 134.0 bits (336), Expect = 7.3e-32
Identity = 66/108 (61.11%), Postives = 80/108 (74.07%), Query Frame = 1 

Query: 38  YGLK---HRGGRLAMKAYKVKLITPDG-EKTVECDADLYILDAAEESGLDLPYSCRAGAC 97
           +GLK   + GG      YKVKL+ PDG E   E   D YILDAAEE+G+DLPYSCRAGAC
Sbjct: 44  FGLKCSANSGGATMSAVYKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGAC 103

Query: 98  SSCVGKVVSGKLDQSDQSFLDDEQVAEGWVLTCVARPESDLVIETHKE 142
           S+C G++VSG +DQSD SFL+D  + +G+VLTCVA P+SD VI THKE
Sbjct: 104 STCAGQIVSGNVDQSDGSFLEDSHLEKGYVLTCVAYPQSDCVIHTHKE 151

[Close]
BLAST of CSPI03G19090 vs. TAIR10
Match: AT5G10000.1 (AT5G10000.1 ferredoxin 4)

HSP 1 Score: 114.0 bits (284), Expect = 7.8e-26
Identity = 52/99 (52.53%), Postives = 76/99 (76.77%), Query Frame = 1 

Query: 44  GGRLAMKAYKVKLITPDGEKT-VECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVS 103
           G   A ++ KVKLI+P+GE+  +E + D  IL++AE +GL+LPYSCR+G C +C GK+VS
Sbjct: 46  GKVFAKESRKVKLISPEGEEQEIEGNEDCCILESAENAGLELPYSCRSGTCGTCCGKLVS 105

Query: 104 GKLDQSDQSFLDDEQVAEGWVLTCVARPESDLVIETHKE 142
           GK+DQS  SFL++EQ+ +G++LTC+A P  D V+ THK+
Sbjct: 106 GKVDQSLGSFLEEEQIQKGYILTCIALPLEDCVVYTHKQ 144

[Close]
BLAST of CSPI03G19090 vs. TAIR10
Match: AT4G14890.1 (AT4G14890.1 2Fe-2S ferredoxin-like superfamily protein)

HSP 1 Score: 76.3 bits (186), Expect = 1.8e-14
Identity = 41/99 (41.41%), Postives = 59/99 (59.60%), Query Frame = 1 

Query: 45  GRLAMKAYKVKLITPDGEKT-VECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSG 104
           GR+  +AYKV ++  DG+ T +E + D  IL  A +SGLD+PY C  G C +C  K+V+G
Sbjct: 46  GRIIARAYKV-VVEHDGKTTELEVEPDETILSKALDSGLDVPYDCNLGVCMTCPAKLVTG 105

Query: 105 KLDQSDQSFLDDEQVAEGWVLTCVARPESDLVIETHKED 143
            +DQS    L D+ V  G+ L C + P SD  I+   E+
Sbjct: 106 TVDQSG-GMLSDDVVERGYTLLCASYPTSDCHIKMIPEE 142

[Close]
BLAST of CSPI03G19090 vs. NCBI nr
Match: gi|449457045|ref|XP_004146259.1| (PREDICTED: ferredoxin, leaf L-A-like [Cucumis sativus])

HSP 1 Score: 300.4 bits (768), Expect = 1.7e-78
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 1 

Query: 1   MSSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKHRGGRLAMKAYKVKLITPD 60
           MSSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKHRGGRLAMKAYKVKLITPD
Sbjct: 1   MSSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKHRGGRLAMKAYKVKLITPD 60

Query: 61  GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE 120
           GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE
Sbjct: 61  GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE 120

Query: 121 GWVLTCVARPESDLVIETHKEDSFAG 147
           GWVLTCVARPESDLVIETHKEDSFAG
Sbjct: 121 GWVLTCVARPESDLVIETHKEDSFAG 146

[Close]
BLAST of CSPI03G19090 vs. NCBI nr
Match: gi|659112074|ref|XP_008456052.1| (PREDICTED: ferredoxin-like [Cucumis melo])

HSP 1 Score: 260.8 bits (665), Expect = 1.5e-66
Identity = 122/146 (83.56%), Postives = 133/146 (91.10%), Query Frame = 1 

Query: 1   MSSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKHRGGRLAMKAYKVKLITPD 60
           M STTA TSPFPATSF+RRNPTGGVS KPFPNMGESL+GLKHRGGR+   AY VKLITP+
Sbjct: 1   MGSTTAFTSPFPATSFLRRNPTGGVSLKPFPNMGESLFGLKHRGGRVTAMAYNVKLITPE 60

Query: 61  GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE 120
           GEK++ C  D YILDAAEE+G+DLPYSCRAGACSSC+GKVVSGKLDQSDQSFLDD+QVAE
Sbjct: 61  GEKSITCPDDAYILDAAEENGIDLPYSCRAGACSSCIGKVVSGKLDQSDQSFLDDDQVAE 120

Query: 121 GWVLTCVARPESDLVIETHKEDSFAG 147
           GWVLTCVAR ESD+VIETHKED FAG
Sbjct: 121 GWVLTCVARAESDVVIETHKEDVFAG 146

[Close]
BLAST of CSPI03G19090 vs. NCBI nr
Match: gi|802591910|ref|XP_012071291.1| (PREDICTED: ferredoxin-A-like [Jatropha curcas])

HSP 1 Score: 190.3 bits (482), Expect = 2.4e-45
Identity = 92/142 (64.79%), Postives = 116/142 (81.69%), Query Frame = 1 

Query: 3   STTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKH-RGGRL-AMKAYKVKLITPD 62
           ++TA++S   +TSF RR P    S +  PN+G++L+GLK  RGG+  AM +YKVKL+TP+
Sbjct: 2   ASTALSSAMVSTSFTRRQPV--TSLRALPNVGQALFGLKSSRGGKFKAMASYKVKLLTPE 61

Query: 63  GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE 122
           GEK +EC  D+YILDAAEE+G+DLPYSCRAG+CSSC GKVV G++DQSD SFLDDEQ+ E
Sbjct: 62  GEKVIECPDDVYILDAAEEAGVDLPYSCRAGSCSSCAGKVVGGEVDQSDGSFLDDEQMEE 121

Query: 123 GWVLTCVARPESDLVIETHKED 143
           GWVLTCVA P SD+VIETHKE+
Sbjct: 122 GWVLTCVAYPTSDVVIETHKEE 141

[Close]
BLAST of CSPI03G19090 vs. NCBI nr
Match: gi|694328938|ref|XP_009355250.1| (PREDICTED: ferredoxin, leaf L-A-like [Pyrus x bretschneideri])

HSP 1 Score: 187.6 bits (475), Expect = 1.6e-44
Identity = 90/146 (61.64%), Postives = 115/146 (78.77%), Query Frame = 1 

Query: 2   SSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLK-HRGGRLAMKAYKVKLITPD 61
           ++  A++S   +TSFIR  P    S +  PN+G++L+GLK +RGGR+AM AYKVKLITP+
Sbjct: 4   TAAAALSSTMVSTSFIRGQPM--TSLRLSPNVGQALFGLKANRGGRVAMAAYKVKLITPE 63

Query: 62  GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE 121
           G +  EC  D+YILDAAEE+G+DLPYSCRAG+CSSC GKVVSG +DQSDQSFLDD+Q+  
Sbjct: 64  GPQEFECPEDVYILDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDDQIGG 123

Query: 122 GWVLTCVARPESDLVIETHKEDSFAG 147
           G+VLTCVA P SD+ +ETHKE+   G
Sbjct: 124 GFVLTCVAYPSSDVTLETHKEEELTG 147

[Close]
BLAST of CSPI03G19090 vs. NCBI nr
Match: gi|568833694|ref|XP_006471012.1| (PREDICTED: ferredoxin [Citrus sinensis])

HSP 1 Score: 187.2 bits (474), Expect = 2.1e-44
Identity = 92/142 (64.79%), Postives = 112/142 (78.87%), Query Frame = 1 

Query: 7   ITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLK-HRGGRL-AMKAYKVKLITPDGEKT 66
           ++S   +TSFIR  PT   S K  PNMG++++GLK +RGGR+ AM  YKVKLITP GE+ 
Sbjct: 4   LSSAMVSTSFIRSKPTA-TSLKAMPNMGQAIFGLKANRGGRVVAMATYKVKLITPGGEEE 63

Query: 67  VECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAEGWVL 126
           + C  D +ILDAAEE+GLDLPYSCRAGACSSC GKVVSG +DQS+QSFLDD+Q+ EG+VL
Sbjct: 64  INCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQIGEGFVL 123

Query: 127 TCVARPESDLVIETHKEDSFAG 147
           TC A P SD+ IETHKE+  AG
Sbjct: 124 TCAAYPTSDVTIETHKEEELAG 144

The following BLAST results are available for this feature:
BLAST of CSPI03G19090 vs. Swiss-Prot
Match NameE-valueIdentityDescription
FER1_ARATH1.1e-4564.38Ferredoxin-1, chloroplastic OS=Arabidopsis thaliana GN=FD1 PE=1 SV=1[more]
FER2_ARATH5.4e-4563.45Ferredoxin-2, chloroplastic OS=Arabidopsis thaliana GN=FD2 PE=1 SV=1[more]
FER_CAPAN4.8e-4156.64Ferredoxin, chloroplastic OS=Capsicum annuum GN=AP1 PE=1 SV=1[more]
FER1_MESCR9.9e-3954.17Ferredoxin-1, chloroplastic OS=Mesembryanthemum crystallinum PE=2 SV=1[more]
FER1_SPIOL1.3e-3855.63Ferredoxin-1, chloroplastic OS=Spinacia oleracea GN=PETF PE=1 SV=2[more]
BLAST of CSPI03G19090 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L764_CUCSA1.2e-78100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G222800 PE=4 SV=1[more]
A0A067L2U1_JATCU1.7e-4564.79Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04972 PE=4 SV=1[more]
A0A0G2UGP8_9ROSA1.1e-4461.64Leaf L-A-like ferredoxin OS=Pyrus betulifolia GN=FD1 PE=2 SV=1[more]
V4T673_9ROSI1.9e-4464.79Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002793mg PE=4 SV=1[more]
A0A067E882_CITSI2.5e-4464.79Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032269mg PE=4 SV=1[more]
BLAST of CSPI03G19090 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G10960.16.2e-4764.38 ferredoxin 1[more]
AT1G60950.13.1e-4663.45 2Fe-2S ferredoxin-like superfamily protein[more]
AT2G27510.17.3e-3261.11 ferredoxin 3[more]
AT5G10000.17.8e-2652.53 ferredoxin 4[more]
AT4G14890.11.8e-1441.41 2Fe-2S ferredoxin-like superfamily protein[more]
BLAST of CSPI03G19090 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449457045|ref|XP_004146259.1|1.7e-78100.00PREDICTED: ferredoxin, leaf L-A-like [Cucumis sativus][more]
gi|659112074|ref|XP_008456052.1|1.5e-6683.56PREDICTED: ferredoxin-like [Cucumis melo][more]
gi|802591910|ref|XP_012071291.1|2.4e-4564.79PREDICTED: ferredoxin-A-like [Jatropha curcas][more]
gi|694328938|ref|XP_009355250.1|1.6e-4461.64PREDICTED: ferredoxin, leaf L-A-like [Pyrus x bretschneideri][more]
gi|568833694|ref|XP_006471012.1|2.1e-4464.79PREDICTED: ferredoxin [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR0010412Fe-2S_ferredoxin-type
IPR0060582Fe2S_fd_BS
IPR010241Fd_pln
IPR012675Beta-grasp_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0009055electron carrier activity
GO:0051536iron-sulfur cluster binding
GO:00515372 iron, 2 sulfur cluster binding
Vocabulary: Biological Process
TermDefinition
GO:0022900electron transport chain
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009767 photosynthetic electron transport chain
biological_process GO:0009639 response to red or far red light
biological_process GO:0022900 electron transport chain
cellular_component GO:0005575 cellular_component
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0051536 iron-sulfur cluster binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G19090.1CSPI03G19090.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPFAMPF00111Fer2coord: 58..130
score: 5.9
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPROFILEPS510852FE2S_FER_2coord: 52..142
score: 13
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainunknownSSF542922Fe-2S ferredoxin-likecoord: 48..143
score: 2.36
IPR0060582Fe-2S ferredoxin, iron-sulphur binding sitePROSITEPS001972FE2S_FER_1coord: 88..96
scor
IPR010241Ferredoxin [2Fe-2S], plantTIGRFAMsTIGR02008TIGR02008coord: 51..143
score: 7.2
IPR012675Beta-grasp domainGENE3DG3DSA:3.10.20.30coord: 48..143
score: 1.2
NoneNo IPR availablePANTHERPTHR19370NADH-CYTOCHROME B5 REDUCTASEcoord: 16..145
score: 5.9
NoneNo IPR availablePANTHERPTHR19370:SF120FERREDOXIN-1, CHLOROPLASTIC-RELATEDcoord: 16..145
score: 5.9

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI03G19090Cucumber (Chinese Long) v2cpicuB120
CSPI03G19090Melon (DHL92) v3.5.1cpimeB241
CSPI03G19090Watermelon (Charleston Gray)cpiwcgB237
CSPI03G19090Watermelon (97103) v1cpiwmB242
CSPI03G19090Cucurbita pepo (Zucchini)cpecpiB208
CSPI03G19090Cucurbita pepo (Zucchini)cpecpiB388
CSPI03G19090Bottle gourd (USVL1VR-Ls)cpilsiB209
CSPI03G19090Melon (DHL92) v3.6.1cpimedB239
CSPI03G19090Cucumber (Gy14) v2cgybcpiB110
CSPI03G19090Silver-seed gourdcarcpiB0047
CSPI03G19090Silver-seed gourdcarcpiB0685
CSPI03G19090Cucumber (Chinese Long) v3cpicucB144
CSPI03G19090Watermelon (97103) v2cpiwmbB221
CSPI03G19090Wax gourdcpiwgoB283
CSPI03G19090Cucumber (Gy14) v1cgycpiB003
CSPI03G19090Cucurbita maxima (Rimu)cmacpiB326
CSPI03G19090Cucurbita maxima (Rimu)cmacpiB705
CSPI03G19090Cucurbita moschata (Rifu)cmocpiB315
CSPI03G19090Cucurbita moschata (Rifu)cmocpiB698