CSPI03G18970 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G18970
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionMajor latex-like protein
LocationChr3 : 14637877 .. 14638222 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTTCATTTCTCACTCCCTTTGTGGAACAAAATACATAGGTGGCCCAGCAGAGATGAAGGAGAGGTTAGCCTTTGACGATGCTAACAAATCAATAGCTTTTGAGGTCTTCGAAGGAGATCTATTAAGAGATTTTGAAGTGTTCAAAATGAAAATGCAAGTTAATAATGAGAAAGGTAGCAATGGGAGCTTAGTTAATTGGTCTATAGAATTTGTGAAGGCAAATGAAGATGTGGCTGCACCACATCAGTATCTCACAATTGCAGCTCAAACAAGCAAAACACTTGATGATTACCTTTGCAACAACTGAACCAAAAACCATATCCCCAACTTCACTTCACTGC

mRNA sequence

ATGGATTTCATTTCTCACTCCCTTTGTGGAACAAAATACATAGGTGGCCCAGCAGAGATGAAGGAGAGGTTAGCCTTTGACGATGCTAACAAATCAATAGCTTTTGAGGTCTTCGAAGGAGATCTATTAAGAGATTTTGAAGTGTTCAAAATGAAAATGCAAGTTAATAATGAGAAAGGTAGCAATGGGAGCTTAGTTAATTGGTCTATAGAATTTGTGAAGGCAAATGAAGATGTGGCTGCACCACATCAGTATCTCACAATTGCAGCTCAAACAAGCAAAACACTTGATGATTACCTTTGCAACAACTGA

Coding sequence (CDS)

ATGGATTTCATTTCTCACTCCCTTTGTGGAACAAAATACATAGGTGGCCCAGCAGAGATGAAGGAGAGGTTAGCCTTTGACGATGCTAACAAATCAATAGCTTTTGAGGTCTTCGAAGGAGATCTATTAAGAGATTTTGAAGTGTTCAAAATGAAAATGCAAGTTAATAATGAGAAAGGTAGCAATGGGAGCTTAGTTAATTGGTCTATAGAATTTGTGAAGGCAAATGAAGATGTGGCTGCACCACATCAGTATCTCACAATTGCAGCTCAAACAAGCAAAACACTTGATGATTACCTTTGCAACAACTGA
Homology
[Close]
BLAST of CSPI03G18970 vs. Swiss-Prot
Match: MLP31_ARATH (MLP-like protein 31 OS=Arabidopsis thaliana GN=MLP31 PE=2 SV=2)

HSP 1 Score: 66.6 bits (161), Expect = 1.8e-10
Identity = 31/83 (37.35%), Postives = 53/83 (63.86%), Query Frame = 1 

Query: 21  KERLAFDDANKS-IAFEVFEGDLLRDFEVFKMKMQVNNEKGSNGSLVNWSIEFVKANEDV 80
           KER+   +  K+ I F V EGDLL++++ F + +QV  ++G  GS+V+W +E+ K ++ V
Sbjct: 87  KERIEAVEPEKNLITFRVIEGDLLKEYKSFVITIQVTPKRGGPGSVVHWHVEYEKIDDKV 146

Query: 81  AAPHQYLTIAAQTSKTLDDYLCN 103
           A P  +L    + SK +D++L N
Sbjct: 147 AHPETFLDFCVEVSKEIDEHLLN 169

[Close]
BLAST of CSPI03G18970 vs. Swiss-Prot
Match: ML149_PAPSO (Major latex protein 149 OS=Papaver somniferum GN=MLP149 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.2e-09
Identity = 28/92 (30.43%), Postives = 51/92 (55.43%), Query Frame = 1 

Query: 10  GTKYIGGPAEMKERLAFDDANKSIAFEVFEGDLLRDFEVFKMKMQVNNEKGSNGSLVNWS 69
           G  + G     KE+  ++D  ++I   + EGDL+ D++ F   + V+ +   +GS+V + 
Sbjct: 65  GYMHEGKTLTCKEKTTYNDETRTICHSISEGDLMNDYKKFDATLVVDPKDNGHGSIVKYI 124

Query: 70  IEFVKANEDVAAPHQYLTIAAQTSKTLDDYLC 102
           +++ K NED   P  YL +  Q ++ L+ YLC
Sbjct: 125 LDYEKINEDSPVPIHYLALCNQATEDLNTYLC 156

[Close]
BLAST of CSPI03G18970 vs. Swiss-Prot
Match: MLP15_PAPSO (Major latex protein 15 OS=Papaver somniferum GN=MLP15 PE=2 SV=2)

HSP 1 Score: 60.5 bits (145), Expect = 1.3e-08
Identity = 26/87 (29.89%), Postives = 45/87 (51.72%), Query Frame = 1 

Query: 15  GGPAEMKERLAFDDANKSIAFEVFEGDLLRDFEVFKMKMQVNNEKGSNGSLVNWSIEFVK 74
           G P  +KE+  ++D  ++I     EG ++ D++ F   + V  +    GS+V W +++ K
Sbjct: 70  GKPLTVKEKTTYNDETRTINHNGIEGGMMNDYKKFVATLVVKPKANGQGSIVTWIVDYEK 129

Query: 75  ANEDVAAPHQYLTIAAQTSKTLDDYLC 102
            NED   P  YL    Q  + L+ +LC
Sbjct: 130 INEDSPVPFDYLAFFQQNIEDLNSHLC 156

[Close]
BLAST of CSPI03G18970 vs. TrEMBL
Match: A0A0A0L9D7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G219190 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.0e-44
Identity = 94/102 (92.16%), Postives = 95/102 (93.14%), Query Frame = 1 

Query: 3   FISHSLCGTKY-IGGPAEMKERLAFDDANKSIAFEVFEGDLLRDFEVFKMKMQVNNEKGS 62
           F   S+   KY IGGPAEMKERLAFDDANKSIAFEVFEGDLLRDFEVFKMKMQVNNEKGS
Sbjct: 50  FAHASVIHIKYNIGGPAEMKERLAFDDANKSIAFEVFEGDLLRDFEVFKMKMQVNNEKGS 109

Query: 63  NGSLVNWSIEFVKANEDVAAPHQYLTIAAQTSKTLDDYLCNN 104
           NGSLVNWSIEFVKANEDVAAPHQYLTIAAQTSKTLDDYLCNN
Sbjct: 110 NGSLVNWSIEFVKANEDVAAPHQYLTIAAQTSKTLDDYLCNN 151

[Close]
BLAST of CSPI03G18970 vs. TrEMBL
Match: A0A0A0LA22_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G331340 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 6.8e-41
Identity = 88/102 (86.27%), Postives = 90/102 (88.24%), Query Frame = 1 

Query: 3   FISHSLCGTKY-IGGPAEMKERLAFDDANKSIAFEVFEGDLLRDFEVFKMKMQVNNEKGS 62
           F   S+   KY IGGPAE+KERLAFDDANKSIAFEVFEGDL RDFEVFKMKMQV NEKGS
Sbjct: 64  FAHGSVIHLKYNIGGPAEIKERLAFDDANKSIAFEVFEGDLFRDFEVFKMKMQVINEKGS 123

Query: 63  NGSLVNWSIEFVKANEDVAAPHQYLTIAAQTSKTLDDYLCNN 104
           NGS VNWSIEFVK NEDVAAPH YLTIAAQTSKTLDDYLCNN
Sbjct: 124 NGSSVNWSIEFVKENEDVAAPHHYLTIAAQTSKTLDDYLCNN 165

[Close]
BLAST of CSPI03G18970 vs. TrEMBL
Match: A0A0A0LCM8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G333840 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 8.1e-26
Identity = 61/89 (68.54%), Postives = 68/89 (76.40%), Query Frame = 1 

Query: 15  GGPAEMKERLAFDDANKSIAFEVFEGDLLRDFEVFKMKMQVNNEKGSNGSLVNWSIEFVK 74
           G P E+KERLA DDANKSI FE  EGD LR+FEV K+K QV  E G+NG  VNWSIEFVK
Sbjct: 64  GKPEEVKERLAIDDANKSITFECLEGDPLRNFEVLKLKFQVL-ENGNNGGTVNWSIEFVK 123

Query: 75  ANEDVAAPHQYLTIAAQTSKTLDDYLCNN 104
           ANEDVA+PH YL    + +K LDDYLCNN
Sbjct: 124 ANEDVASPHHYLLCVTKVAKGLDDYLCNN 151

[Close]
BLAST of CSPI03G18970 vs. TrEMBL
Match: A0A0A0L771_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G337350 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 5.3e-17
Identity = 46/89 (51.69%), Postives = 59/89 (66.29%), Query Frame = 1 

Query: 15  GGPAEMKERLAFDDANKSIAFEVFEGDLLRDFEVFKMKMQVNNEKGSNGSLVNWSIEFVK 74
           GG  E K RL  D+ NKSIA E  EGD+L++F+VFK+K+QV +      + V W +EFVK
Sbjct: 65  GGLEESKVRLTVDEPNKSIAMECLEGDVLKEFQVFKVKVQVKDSDVVGVNSVKWCVEFVK 124

Query: 75  ANEDVAAPHQYLTIAAQTSKTLDDYLCNN 104
           ANEDVA P+ +L    +  K LD YLCNN
Sbjct: 125 ANEDVAPPNNHLKCGIKVCKDLDAYLCNN 153

[Close]
BLAST of CSPI03G18970 vs. TrEMBL
Match: A0A0A0LA17_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G321300 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 6.9e-17
Identity = 43/91 (47.25%), Postives = 61/91 (67.03%), Query Frame = 1 

Query: 13  YIGGPAEMKERLAFDDANKSIAFEVFEGDLLRDFEVFKMKMQVNNEKGSNGSLVNWSIEF 72
           Y G   E+K +L  D+ANK+I +E  EGDL +DF++FK+K++V +   S  S VNW +EF
Sbjct: 31  YTGRAVEVKMKLLVDEANKTIIYECLEGDLFKDFDMFKVKIEVTDGGSSGNSSVNWCLEF 90

Query: 73  VKANEDVAAPHQYLTIAAQTSKTLDDYLCNN 104
           VK+NE+VA P+ YL    +  K +D YL NN
Sbjct: 91  VKSNENVAPPNDYLQFGVKICKDVDAYLSNN 121

[Close]
BLAST of CSPI03G18970 vs. TAIR10
Match: AT1G70840.1 (AT1G70840.1 MLP-like protein 31)

HSP 1 Score: 66.6 bits (161), Expect = 1.0e-11
Identity = 31/83 (37.35%), Postives = 53/83 (63.86%), Query Frame = 1 

Query: 21  KERLAFDDANKS-IAFEVFEGDLLRDFEVFKMKMQVNNEKGSNGSLVNWSIEFVKANEDV 80
           KER+   +  K+ I F V EGDLL++++ F + +QV  ++G  GS+V+W +E+ K ++ V
Sbjct: 87  KERIEAVEPEKNLITFRVIEGDLLKEYKSFVITIQVTPKRGGPGSVVHWHVEYEKIDDKV 146

Query: 81  AAPHQYLTIAAQTSKTLDDYLCN 103
           A P  +L    + SK +D++L N
Sbjct: 147 AHPETFLDFCVEVSKEIDEHLLN 169

[Close]
BLAST of CSPI03G18970 vs. TAIR10
Match: AT1G70870.1 (AT1G70870.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein)

HSP 1 Score: 61.2 bits (147), Expect = 4.3e-10
Identity = 31/86 (36.05%), Postives = 49/86 (56.98%), Query Frame = 1 

Query: 15  GGPAEMKERLAFDDANKSIAFEVFEGDLLRDFEVFKMKMQVNNEKGSNGSLVNWSIEFVK 74
           G   +MKER+  D+ANKS+   VFEGD++ ++  F   +Q+   K    S+  WS E+ K
Sbjct: 52  GKVEKMKERVEIDEANKSMTVFVFEGDVMENYSSFTCNLQI-IPKLHGRSIARWSWEYEK 111

Query: 75  ANEDVAAPHQYLTIAAQTSKTLDDYL 101
            N D  AP++Y+  A   +K ++  L
Sbjct: 112 LNADSPAPNKYMDFAVYLTKDIESNL 136

[Close]
BLAST of CSPI03G18970 vs. TAIR10
Match: AT5G28010.1 (AT5G28010.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein)

HSP 1 Score: 60.1 bits (144), Expect = 9.5e-10
Identity = 29/81 (35.80%), Postives = 49/81 (60.49%), Query Frame = 1 

Query: 21  KERLAFDDANKS-IAFEVFEGDLLRDFEVFKMKMQVNNEKGSNGSLVNWSIEFVKANEDV 80
           KER+   +  K  I F V EGD++ +++ F + +QV  ++G  GS+V W IE+ K +E+V
Sbjct: 82  KERIELVEPEKKLIKFRVIEGDVMAEYKSFLITIQVTPKEGGTGSVVKWHIEYEKIDENV 141

Query: 81  AAPHQYLTIAAQTSKTLDDYL 101
             P   L   A+ +K +D++L
Sbjct: 142 PHPENLLPFFAEMTKEIDEHL 162

[Close]
BLAST of CSPI03G18970 vs. TAIR10
Match: AT1G23120.1 (AT1G23120.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein)

HSP 1 Score: 52.8 bits (125), Expect = 1.5e-07
Identity = 25/86 (29.07%), Postives = 47/86 (54.65%), Query Frame = 1 

Query: 15  GGPAEMKERLAFDDANKSIAFEVFEGDLLRDFEVFKMKMQVNNEKGSNGSLVNWSIEFVK 74
           G   ++KE++  D+ NKS++F   EGD+L+ ++ +K+ + V   K     +  W+ E+ K
Sbjct: 60  GKMEQIKEKIDVDEENKSVSFLALEGDVLKQYKSYKITLDV-VPKDHKVCIAKWTWEYEK 119

Query: 75  ANEDVAAPHQYLTIAAQTSKTLDDYL 101
            N+DV  P +Y       ++ L+  L
Sbjct: 120 LNDDVPPPTRYTAFVEDYTRDLETRL 144

[Close]
BLAST of CSPI03G18970 vs. TAIR10
Match: AT1G35310.1 (AT1G35310.1 MLP-like protein 168)

HSP 1 Score: 49.3 bits (116), Expect = 1.7e-06
Identity = 25/87 (28.74%), Postives = 46/87 (52.87%), Query Frame = 1 

Query: 15  GGPAEMKERL-AFDDANKSIAFEVFEGDLLRDFEVFKMKMQVNNEKGSNGSLVNWSIEFV 74
           G P   K+ + A D     I + V EG L  ++ +F   M+V+ ++G +GS+V W++++ 
Sbjct: 61  GEPKVSKDMIEAIDMKMNMIQWRVLEGPLKEEYNIFSKTMKVSPKQGGSGSVVKWNLKYE 120

Query: 75  KANEDVAAPHQYLTIAAQTSKTLDDYL 101
           + +E VA   + L    +    +D YL
Sbjct: 121 RIDEKVAHLERLLQFFVECVNEIDQYL 147

[Close]
BLAST of CSPI03G18970 vs. NCBI nr
Match: gi|778680249|ref|XP_011651277.1| (PREDICTED: major latex protein 146-like [Cucumis sativus])

HSP 1 Score: 187.2 bits (474), Expect = 1.5e-44
Identity = 94/102 (92.16%), Postives = 95/102 (93.14%), Query Frame = 1 

Query: 3   FISHSLCGTKY-IGGPAEMKERLAFDDANKSIAFEVFEGDLLRDFEVFKMKMQVNNEKGS 62
           F   S+   KY IGGPAEMKERLAFDDANKSIAFEVFEGDLLRDFEVFKMKMQVNNEKGS
Sbjct: 50  FAHASVIHIKYNIGGPAEMKERLAFDDANKSIAFEVFEGDLLRDFEVFKMKMQVNNEKGS 109

Query: 63  NGSLVNWSIEFVKANEDVAAPHQYLTIAAQTSKTLDDYLCNN 104
           NGSLVNWSIEFVKANEDVAAPHQYLTIAAQTSKTLDDYLCNN
Sbjct: 110 NGSLVNWSIEFVKANEDVAAPHQYLTIAAQTSKTLDDYLCNN 151

[Close]
BLAST of CSPI03G18970 vs. NCBI nr
Match: gi|778680829|ref|XP_004151203.2| (PREDICTED: major latex protein 149-like [Cucumis sativus])

HSP 1 Score: 174.5 bits (441), Expect = 9.8e-41
Identity = 88/102 (86.27%), Postives = 90/102 (88.24%), Query Frame = 1 

Query: 3   FISHSLCGTKY-IGGPAEMKERLAFDDANKSIAFEVFEGDLLRDFEVFKMKMQVNNEKGS 62
           F   S+   KY IGGPAE+KERLAFDDANKSIAFEVFEGDL RDFEVFKMKMQV NEKGS
Sbjct: 50  FAHGSVIHLKYNIGGPAEIKERLAFDDANKSIAFEVFEGDLFRDFEVFKMKMQVINEKGS 109

Query: 63  NGSLVNWSIEFVKANEDVAAPHQYLTIAAQTSKTLDDYLCNN 104
           NGS VNWSIEFVK NEDVAAPH YLTIAAQTSKTLDDYLCNN
Sbjct: 110 NGSSVNWSIEFVKENEDVAAPHHYLTIAAQTSKTLDDYLCNN 151

[Close]
BLAST of CSPI03G18970 vs. NCBI nr
Match: gi|700202691|gb|KGN57824.1| (hypothetical protein Csa_3G331340 [Cucumis sativus])

HSP 1 Score: 174.5 bits (441), Expect = 9.8e-41
Identity = 88/102 (86.27%), Postives = 90/102 (88.24%), Query Frame = 1 

Query: 3   FISHSLCGTKY-IGGPAEMKERLAFDDANKSIAFEVFEGDLLRDFEVFKMKMQVNNEKGS 62
           F   S+   KY IGGPAE+KERLAFDDANKSIAFEVFEGDL RDFEVFKMKMQV NEKGS
Sbjct: 64  FAHGSVIHLKYNIGGPAEIKERLAFDDANKSIAFEVFEGDLFRDFEVFKMKMQVINEKGS 123

Query: 63  NGSLVNWSIEFVKANEDVAAPHQYLTIAAQTSKTLDDYLCNN 104
           NGS VNWSIEFVK NEDVAAPH YLTIAAQTSKTLDDYLCNN
Sbjct: 124 NGSSVNWSIEFVKENEDVAAPHHYLTIAAQTSKTLDDYLCNN 165

[Close]
BLAST of CSPI03G18970 vs. NCBI nr
Match: gi|659114440|ref|XP_008457055.1| (PREDICTED: MLP-like protein 34 [Cucumis melo])

HSP 1 Score: 129.8 bits (325), Expect = 2.8e-27
Identity = 66/98 (67.35%), Postives = 73/98 (74.49%), Query Frame = 1 

Query: 7   SLCGTKYIGG-PAEMKERLAFDDANKSIAFEVFEGDLLRDFEVFKMKMQVNNEKGSNGSL 66
           S+   KY  G P EMKERLA DDANKSI FE  EGD LRDFEV K+K QV  E G+NG  
Sbjct: 55  SIIHLKYNAGRPEEMKERLAIDDANKSITFECLEGDALRDFEVLKLKFQVF-ENGNNGGT 114

Query: 67  VNWSIEFVKANEDVAAPHQYLTIAAQTSKTLDDYLCNN 104
           VNWSIEFVKANEDVA+PH YL   ++ +K LDDYLCNN
Sbjct: 115 VNWSIEFVKANEDVASPHHYLLCVSKVAKGLDDYLCNN 151

[Close]
BLAST of CSPI03G18970 vs. NCBI nr
Match: gi|449464138|ref|XP_004149786.1| (PREDICTED: kirola [Cucumis sativus])

HSP 1 Score: 124.4 bits (311), Expect = 1.2e-25
Identity = 61/89 (68.54%), Postives = 68/89 (76.40%), Query Frame = 1 

Query: 15  GGPAEMKERLAFDDANKSIAFEVFEGDLLRDFEVFKMKMQVNNEKGSNGSLVNWSIEFVK 74
           G P E+KERLA DDANKSI FE  EGD LR+FEV K+K QV  E G+NG  VNWSIEFVK
Sbjct: 64  GKPEEVKERLAIDDANKSITFECLEGDPLRNFEVLKLKFQVL-ENGNNGGTVNWSIEFVK 123

Query: 75  ANEDVAAPHQYLTIAAQTSKTLDDYLCNN 104
           ANEDVA+PH YL    + +K LDDYLCNN
Sbjct: 124 ANEDVASPHHYLLCVTKVAKGLDDYLCNN 151

The following BLAST results are available for this feature:
BLAST of CSPI03G18970 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MLP31_ARATH1.8e-1037.35MLP-like protein 31 OS=Arabidopsis thaliana GN=MLP31 PE=2 SV=2[more]
ML149_PAPSO1.2e-0930.43Major latex protein 149 OS=Papaver somniferum GN=MLP149 PE=2 SV=1[more]
MLP15_PAPSO1.3e-0829.89Major latex protein 15 OS=Papaver somniferum GN=MLP15 PE=2 SV=2[more]
BLAST of CSPI03G18970 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L9D7_CUCSA1.0e-4492.16Uncharacterized protein OS=Cucumis sativus GN=Csa_3G219190 PE=4 SV=1[more]
A0A0A0LA22_CUCSA6.8e-4186.27Uncharacterized protein OS=Cucumis sativus GN=Csa_3G331340 PE=4 SV=1[more]
A0A0A0LCM8_CUCSA8.1e-2668.54Uncharacterized protein OS=Cucumis sativus GN=Csa_3G333840 PE=4 SV=1[more]
A0A0A0L771_CUCSA5.3e-1751.69Uncharacterized protein OS=Cucumis sativus GN=Csa_3G337350 PE=4 SV=1[more]
A0A0A0LA17_CUCSA6.9e-1747.25Uncharacterized protein OS=Cucumis sativus GN=Csa_3G321300 PE=4 SV=1[more]
BLAST of CSPI03G18970 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G70840.11.0e-1137.35 MLP-like protein 31[more]
AT1G70870.14.3e-1036.05 Polyketide cyclase/dehydrase and lipid transport superfamily protein[more]
AT5G28010.19.5e-1035.80 Polyketide cyclase/dehydrase and lipid transport superfamily protein[more]
AT1G23120.11.5e-0729.07 Polyketide cyclase/dehydrase and lipid transport superfamily protein[more]
AT1G35310.11.7e-0628.74 MLP-like protein 168[more]
BLAST of CSPI03G18970 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778680249|ref|XP_011651277.1|1.5e-4492.16PREDICTED: major latex protein 146-like [Cucumis sativus][more]
gi|778680829|ref|XP_004151203.2|9.8e-4186.27PREDICTED: major latex protein 149-like [Cucumis sativus][more]
gi|700202691|gb|KGN57824.1|9.8e-4186.27hypothetical protein Csa_3G331340 [Cucumis sativus][more]
gi|659114440|ref|XP_008457055.1|2.8e-2767.35PREDICTED: MLP-like protein 34 [Cucumis melo][more]
gi|449464138|ref|XP_004149786.1|1.2e-2568.54PREDICTED: kirola [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000916Bet_v_I/MLP
IPR023393START-like_dom_sf
Vocabulary: Biological Process
TermDefinition
GO:0006952defense response
GO:0009607response to biotic stimulus
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006952 defense response
biological_process GO:0009607 response to biotic stimulus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G18970.1CSPI03G18970.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000916Bet v I/Major latex proteinPFAMPF00407Bet_v_1coord: 17..102
score: 4.6
IPR000916Bet v I/Major latex proteinSMARTSM01037Bet_v_1_2coord: 7..103
score: 2.
IPR023393START-like domainGENE3DG3DSA:3.30.530.20coord: 20..103
score: 2.6
NoneNo IPR availablePANTHERPTHR31907FAMILY NOT NAMEDcoord: 14..100
score: 8.5
NoneNo IPR availablePANTHERPTHR31907:SF2SUBFAMILY NOT NAMEDcoord: 14..100
score: 8.5
NoneNo IPR availableunknownSSF55961Bet v1-likecoord: 20..102
score: 1.35

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI03G18970Csa3G219190Cucumber (Chinese Long) v2cpicuB120
CSPI03G18970CsaV3_3G019100Cucumber (Chinese Long) v3cpicucB144
CSPI03G18970Cucsa.033060Cucumber (Gy14) v1cgycpiB003
CSPI03G18970CsGy3G018890Cucumber (Gy14) v2cgybcpiB110
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI03G18970Cucurbita pepo (Zucchini)cpecpiB208
CSPI03G18970Cucurbita pepo (Zucchini)cpecpiB388
CSPI03G18970Bottle gourd (USVL1VR-Ls)cpilsiB209
CSPI03G18970Melon (DHL92) v3.6.1cpimedB239
CSPI03G18970Silver-seed gourdcarcpiB0068
CSPI03G18970Silver-seed gourdcarcpiB0069
CSPI03G18970Silver-seed gourdcarcpiB0685
CSPI03G18970Watermelon (97103) v2cpiwmbB221
CSPI03G18970Wax gourdcpiwgoB283
CSPI03G18970Cucurbita maxima (Rimu)cmacpiB326
CSPI03G18970Cucurbita maxima (Rimu)cmacpiB705
CSPI03G18970Cucurbita moschata (Rifu)cmocpiB315
CSPI03G18970Cucurbita moschata (Rifu)cmocpiB698
CSPI03G18970Melon (DHL92) v3.5.1cpimeB241
CSPI03G18970Watermelon (Charleston Gray)cpiwcgB237
CSPI03G18970Watermelon (97103) v1cpiwmB242