CSPI03G18630 (gene) Wild cucumber (PI 183967)

NameCSPI03G18630
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionTransposon protein, putative, CACTA, En/Spm sub-class
LocationChr3 : 14256585 .. 14257151 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAAGTCATGGATGATCCAAAATAGGATGTCAAGAGAATATGATTTAGGAGTCGAAATGTTCATTAAATTTGGGTTGAGTTATGCCAAAGGTTCCAATTCAATTAGGTGTCCATGTTTGAATTGCGACAATCATTTACTTAAGAATGTCTCAATATTTCGGTATCATTTGTATGCCAATGGAATTGATAAAAGTTACAAGGTATGGTCCTGGTATGGTGAAGAATTGATCTCAGATAACGTTACCAACACGACGAAAAATACAGTGGATGAAACTGATGAAAACGACGATTTATTTAATACAGTTAATATGGTTCAATCCGTTCAAGAACAATCTTCTAATGCATTCAATACCTTTGACACTATGTTTGATGACGTGAAGAAACCCTTATACCCAAGATGTAAGAAATTCACAAAGTTGTCAACCCTCATGAGATTGTATAACCTAAAGGTTAGGTATGGTTGGAGTAATACTAGCTTCTCTGAATTACTGTCCATAATAAGTGATTTATTACCTGATAACAACAAAATTTCAATTCCTTATACGAAGCGAAGAAAACACTAG

mRNA sequence

ATGGACAAGTCATGGATGATCCAAAATAGGATGTCAAGAGAATATGATTTAGGAGTCGAAATGTTCATTAAATTTGGGTTGAGTTATGCCAAAGGTTCCAATTCAATTAGGTGTCCATGTTTGAATTGCGACAATCATTTACTTAAGAATGTCTCAATATTTCGGTATCATTTGTATGCCAATGGAATTGATAAAAGTTACAAGGTATGGTCCTGGTATGGTGAAGAATTGATCTCAGATAACGTTACCAACACGACGAAAAATACAGTGGATGAAACTGATGAAAACGACGATTTATTTAATACAGTTAATATGGTTCAATCCGTTCAAGAACAATCTTCTAATGCATTCAATACCTTTGACACTATGTTTGATGACGTGAAGAAACCCTTATACCCAAGATGTAAGAAATTCACAAAGTTGTCAACCCTCATGAGATTGTATAACCTAAAGGTTAGGTATGGTTGGAGTAATACTAGCTTCTCTGAATTACTGTCCATAATAAGTGATTTATTACCTGATAACAACAAAATTTCAATTCCTTATACGAAGCGAAGAAAACACTAG

Coding sequence (CDS)

ATGGACAAGTCATGGATGATCCAAAATAGGATGTCAAGAGAATATGATTTAGGAGTCGAAATGTTCATTAAATTTGGGTTGAGTTATGCCAAAGGTTCCAATTCAATTAGGTGTCCATGTTTGAATTGCGACAATCATTTACTTAAGAATGTCTCAATATTTCGGTATCATTTGTATGCCAATGGAATTGATAAAAGTTACAAGGTATGGTCCTGGTATGGTGAAGAATTGATCTCAGATAACGTTACCAACACGACGAAAAATACAGTGGATGAAACTGATGAAAACGACGATTTATTTAATACAGTTAATATGGTTCAATCCGTTCAAGAACAATCTTCTAATGCATTCAATACCTTTGACACTATGTTTGATGACGTGAAGAAACCCTTATACCCAAGATGTAAGAAATTCACAAAGTTGTCAACCCTCATGAGATTGTATAACCTAAAGGTTAGGTATGGTTGGAGTAATACTAGCTTCTCTGAATTACTGTCCATAATAAGTGATTTATTACCTGATAACAACAAAATTTCAATTCCTTATACGAAGCGAAGAAAACACTAG
BLAST of CSPI03G18630 vs. TrEMBL
Match: A5BJV7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011055 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 4.7e-40
Identity = 82/186 (44.09%), Postives = 121/186 (65.05%), Query Frame = 1

Query: 2   DKSWMIQNRMSREYDLGVEMFIKFGLSYAKGSNSIRCPCLNCDNHLLKNVSIFRYHLYAN 61
           ++ WM ++R S EYD GVE FI F L+++    SI+CPCL C N L +   + R HL+ N
Sbjct: 3   NRDWMSKDRRSVEYDEGVENFINFALAHSTNHTSIKCPCLRCGNMLCQTPQVIREHLFFN 62

Query: 62  GIDKSYKVWSWYGEELISDNVTNTTKNTVDETDENDDLFNTVNMVQSVQEQSSNAFNTFD 121
           GID +Y+VW W+GE+  S   +N  +   D+ + ND + +T++MV + Q    N    F 
Sbjct: 63  GIDLNYRVWYWHGEKGPSGAFSNVPQQRYDKCEYND-VADTIDMVNAAQVNCMNDPQVFG 122

Query: 122 TMFDDVKKPLYPRCKKFTKLSTLMRLYNLKVRYGWSNTSFSELLSIISDLLPDNNKISIP 181
            + +D +KPLYP C K+TKLS L++LYNLK RYGWS+  FSELL ++ D+LP NN++S+ 
Sbjct: 123 RLLEDAEKPLYPGCMKYTKLSALVKLYNLKARYGWSDKGFSELLQLLGDMLPLNNEMSLS 182

Query: 182 YTKRRK 188
             + +K
Sbjct: 183 MYEAKK 187

BLAST of CSPI03G18630 vs. TrEMBL
Match: A5ALA6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030061 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 8.0e-40
Identity = 82/186 (44.09%), Postives = 120/186 (64.52%), Query Frame = 1

Query: 2   DKSWMIQNRMSREYDLGVEMFIKFGLSYAKGSNSIRCPCLNCDNHLLKNVSIFRYHLYAN 61
           ++ WM ++R   EYD GVE FI F L+++    SI+CPCL C N L +   + R HL+ N
Sbjct: 3   NRDWMSKDRRLVEYDEGVEKFINFALAHSTNHTSIKCPCLRCGNLLCQTPQVIREHLFFN 62

Query: 62  GIDKSYKVWSWYGEELISDNVTNTTKNTVDETDENDDLFNTVNMVQSVQEQSSNAFNTFD 121
           GID SY+VW W+GE+  S   +N ++   D+   ND + +T++MV + Q    N    F 
Sbjct: 63  GIDLSYRVWYWHGEKGPSGGFSNVSQQRYDKCKYND-VADTIDMVNAAQVNCMNDPQVFG 122

Query: 122 TMFDDVKKPLYPRCKKFTKLSTLMRLYNLKVRYGWSNTSFSELLSIISDLLPDNNKISIP 181
            + +D +KPLYP C K+TKLS L++LYNLK RYGWS+  FSELL ++ D+LP NN++S+ 
Sbjct: 123 RLLEDAEKPLYPGCMKYTKLSALVKLYNLKARYGWSDKGFSELLQLLGDMLPLNNEMSLS 182

Query: 182 YTKRRK 188
             + +K
Sbjct: 183 MYEAKK 187

BLAST of CSPI03G18630 vs. TrEMBL
Match: A5CB63_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040314 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.2e-38
Identity = 80/186 (43.01%), Postives = 119/186 (63.98%), Query Frame = 1

Query: 2   DKSWMIQNRMSREYDLGVEMFIKFGLSYAKGSNSIRCPCLNCDNHLLKNVSIFRYHLYAN 61
           ++ WM ++R S EYD GVE FI F L+++    SI+C CL C N L +   + R HL+ N
Sbjct: 3   NRDWMSKDRRSVEYDEGVENFINFALAHSTNHTSIKCXCLRCGNLLCQTPQVIREHLFFN 62

Query: 62  GIDKSYKVWSWYGEELISDNVTNTTKNTVDETDENDDLFNTVNMVQSVQEQSSNAFNTFD 121
           GID SY+VW W+GE+  S   +N ++   D+ + ND + +T++MV + Q    N    F 
Sbjct: 63  GIDXSYRVWYWHGEKGPSGGFSNVSQQRYDKCEYND-VADTIDMVNAAQVNCMNDPQVFG 122

Query: 122 TMFDDVKKPLYPRCKKFTKLSTLMRLYNLKVRYGWSNTSFSELLSIISDLLPDNNKISIP 181
            + +D +KPLYP C K+TKLS L++LYNLK  YGWS+  FSELL ++ D+LP NN++ + 
Sbjct: 123 RLLEDAEKPLYPGCMKYTKLSALVKLYNLKAXYGWSDKGFSELLQLLGDMLPLNNEMPLS 182

Query: 182 YTKRRK 188
             + +K
Sbjct: 183 MYEAKK 187

BLAST of CSPI03G18630 vs. TrEMBL
Match: A5C4T9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043919 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 4.4e-38
Identity = 79/186 (42.47%), Postives = 119/186 (63.98%), Query Frame = 1

Query: 2   DKSWMIQNRMSREYDLGVEMFIKFGLSYAKGSNSIRCPCLNCDNHLLKNVSIFRYHLYAN 61
           ++ WM ++R   EYD GVE FI F L+++    SI+CPCL C N L +   + R HL+ N
Sbjct: 3   NRDWMSKDRRXVEYDEGVENFINFXLTHSTNHTSIKCPCLRCGNLLCQIPQVIREHLFFN 62

Query: 62  GIDKSYKVWSWYGEELISDNVTNTTKNTVDETDENDDLFNTVNMVQSVQEQSSNAFNTFD 121
           GID SY++W W+GE+  S   +N ++   D+ + ND + +T++MV + Q    N    F 
Sbjct: 63  GIDLSYRIWYWHGEKGPSGGFSNVSQQRYDKCEYND-VVDTIDMVNAAQVNCMNDPQVFG 122

Query: 122 TMFDDVKKPLYPRCKKFTKLSTLMRLYNLKVRYGWSNTSFSELLSIISDLLPDNNKISIP 181
            +  D +KPLYP C K+TKLS L++LYNLK R+GWS+  FSELL ++ D+LP NN++ + 
Sbjct: 123 RLLADAEKPLYPGCMKYTKLSALVKLYNLKARHGWSDKGFSELLQLLGDMLPLNNEMPLS 182

Query: 182 YTKRRK 188
             + +K
Sbjct: 183 MYEAKK 187

BLAST of CSPI03G18630 vs. TrEMBL
Match: A5B592_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_019902 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 9.8e-38
Identity = 80/187 (42.78%), Postives = 117/187 (62.57%), Query Frame = 1

Query: 1   MDKSWMIQNRMSREYDLGVEMFIKFGLSYAKGSNSIRCPCLNCDNHLLKNVSIFRYHLYA 60
           MD+SWM ++RMSREY+ GVE FI F L +      IRCPC+ C N +    +  R H++ 
Sbjct: 1   MDRSWMSKDRMSREYEEGVEYFINFALEHCPNQRGIRCPCMRCGNLIHHTPNKIREHMFF 60

Query: 61  NGIDKSYKVWSWYGEELISDNVTNTTKNTVDETDENDDLFNTVNMVQSVQEQSSNAFNTF 120
           NGID+SY  W W+GE   + +         D  D  D + +TV MV +++++      +F
Sbjct: 61  NGIDQSYCTWYWHGEAGPTSSQPTEMAQRYDTMDCGD-VASTVEMVHAIEDEFMTDPMSF 120

Query: 121 DTMFDDVKKPLYPRCKKFTKLSTLMRLYNLKVRYGWSNTSFSELLSIISDLLPDNNKISI 180
             + +D +KPLYP C KFTKLS L++LYN+K RYGWS+ SFS+LL I+ D+LP NN++ +
Sbjct: 121 KKLLEDAEKPLYPSCIKFTKLSALVKLYNVKARYGWSDKSFSDLLQILGDMLPVNNEMPL 180

Query: 181 PYTKRRK 188
              + +K
Sbjct: 181 SMYEAKK 186

BLAST of CSPI03G18630 vs. NCBI nr
Match: gi|659072230|ref|XP_008464173.1| (PREDICTED: uncharacterized protein LOC103502117 [Cucumis melo])

HSP 1 Score: 208.4 bits (529), Expect = 1.1e-50
Identity = 100/161 (62.11%), Postives = 123/161 (76.40%), Query Frame = 1

Query: 1   MDKSWMIQNRMSREYDLGVEMFIKFGLSYAKGSNSIRCPCLNCDNHLLKNVSIFRYHLYA 60
           MDKSWM++NRMSREY+LGVE FI+FG   AKGS++IRCPCL C N L ++ S  RYHLYA
Sbjct: 1   MDKSWMMENRMSREYELGVEAFIQFGFRNAKGSSTIRCPCLKCGNRLPQDESTVRYHLYA 60

Query: 61  NGIDKSYKVWSWYGEELISDNVTNTTKNTVDETDENDDLFNTVNMVQSVQEQSSNAFNTF 120
           NGID+SYK+W W+GE   S+   N    T +ET  +DDLF+ +NMVQ+V++Q S   NTF
Sbjct: 61  NGIDQSYKIWFWHGESFTSETSCNRQAYTNEET-VDDDLFHVINMVQNVRDQFSEVPNTF 120

Query: 121 DTMFDDVKKPLYPRCKKFTKLSTLMRLYNLKVRYGWSNTSF 162
           D MFDD KKPL+P CK+FTKL  L+RLYNLKVR+GWS   F
Sbjct: 121 DNMFDDAKKPLFPGCKRFTKLLALVRLYNLKVRFGWSVQCF 160

BLAST of CSPI03G18630 vs. NCBI nr
Match: gi|147779778|emb|CAN72425.1| (hypothetical protein VITISV_011055 [Vitis vinifera])

HSP 1 Score: 172.6 bits (436), Expect = 6.8e-40
Identity = 82/186 (44.09%), Postives = 121/186 (65.05%), Query Frame = 1

Query: 2   DKSWMIQNRMSREYDLGVEMFIKFGLSYAKGSNSIRCPCLNCDNHLLKNVSIFRYHLYAN 61
           ++ WM ++R S EYD GVE FI F L+++    SI+CPCL C N L +   + R HL+ N
Sbjct: 3   NRDWMSKDRRSVEYDEGVENFINFALAHSTNHTSIKCPCLRCGNMLCQTPQVIREHLFFN 62

Query: 62  GIDKSYKVWSWYGEELISDNVTNTTKNTVDETDENDDLFNTVNMVQSVQEQSSNAFNTFD 121
           GID +Y+VW W+GE+  S   +N  +   D+ + ND + +T++MV + Q    N    F 
Sbjct: 63  GIDLNYRVWYWHGEKGPSGAFSNVPQQRYDKCEYND-VADTIDMVNAAQVNCMNDPQVFG 122

Query: 122 TMFDDVKKPLYPRCKKFTKLSTLMRLYNLKVRYGWSNTSFSELLSIISDLLPDNNKISIP 181
            + +D +KPLYP C K+TKLS L++LYNLK RYGWS+  FSELL ++ D+LP NN++S+ 
Sbjct: 123 RLLEDAEKPLYPGCMKYTKLSALVKLYNLKARYGWSDKGFSELLQLLGDMLPLNNEMSLS 182

Query: 182 YTKRRK 188
             + +K
Sbjct: 183 MYEAKK 187

BLAST of CSPI03G18630 vs. NCBI nr
Match: gi|778688696|ref|XP_011652815.1| (PREDICTED: uncharacterized protein LOC105435113 [Cucumis sativus])

HSP 1 Score: 172.2 bits (435), Expect = 8.8e-40
Identity = 90/181 (49.72%), Postives = 121/181 (66.85%), Query Frame = 1

Query: 1   MDKSWMIQNRMSREYDLGVEMFIKFGLSYAKGSNSIRCPCL---NCDNHLLKNVSIFRYH 60
           MDKSWM ++R+S++Y+LGVE FIKFG S    S+ IRCPCL   NC+ H  K V   R H
Sbjct: 1   MDKSWMHKSRLSKDYELGVENFIKFGFSNTT-SSYIRCPCLKCGNCEKHSRKGV---RDH 60

Query: 61  LYANGIDKSYKVWSWYGEELISDNVTNTTKNTVDETDENDDLFNTVNMVQSVQEQSSNAF 120
           LY NGID+SYK W W+GEEL + +  + +      T E+ D+ +   M++   E+ S   
Sbjct: 61  LYVNGIDESYKFWFWHGEELPNSSFYDESSKFDTHTCEDQDVGSVKEMIEVAHEEYSKDP 120

Query: 121 NTFDTMFDDVKKPLYPRCKKFTKLSTLMRLYNLKVRYGWSNTSFSELLSIISDLLPDNNK 179
             F+ +  D  KPLY  CKK+TKLSTL++LYNLKVRYGWS+TSFSELL  + ++LP  N+
Sbjct: 121 TGFEKLLIDAGKPLYEGCKKYTKLSTLVKLYNLKVRYGWSDTSFSELLETLKEILPTTNE 177

BLAST of CSPI03G18630 vs. NCBI nr
Match: gi|147853389|emb|CAN80205.1| (hypothetical protein VITISV_030061 [Vitis vinifera])

HSP 1 Score: 171.8 bits (434), Expect = 1.2e-39
Identity = 82/186 (44.09%), Postives = 120/186 (64.52%), Query Frame = 1

Query: 2   DKSWMIQNRMSREYDLGVEMFIKFGLSYAKGSNSIRCPCLNCDNHLLKNVSIFRYHLYAN 61
           ++ WM ++R   EYD GVE FI F L+++    SI+CPCL C N L +   + R HL+ N
Sbjct: 3   NRDWMSKDRRLVEYDEGVEKFINFALAHSTNHTSIKCPCLRCGNLLCQTPQVIREHLFFN 62

Query: 62  GIDKSYKVWSWYGEELISDNVTNTTKNTVDETDENDDLFNTVNMVQSVQEQSSNAFNTFD 121
           GID SY+VW W+GE+  S   +N ++   D+   ND + +T++MV + Q    N    F 
Sbjct: 63  GIDLSYRVWYWHGEKGPSGGFSNVSQQRYDKCKYND-VADTIDMVNAAQVNCMNDPQVFG 122

Query: 122 TMFDDVKKPLYPRCKKFTKLSTLMRLYNLKVRYGWSNTSFSELLSIISDLLPDNNKISIP 181
            + +D +KPLYP C K+TKLS L++LYNLK RYGWS+  FSELL ++ D+LP NN++S+ 
Sbjct: 123 RLLEDAEKPLYPGCMKYTKLSALVKLYNLKARYGWSDKGFSELLQLLGDMLPLNNEMSLS 182

Query: 182 YTKRRK 188
             + +K
Sbjct: 183 MYEAKK 187

BLAST of CSPI03G18630 vs. NCBI nr
Match: gi|778688593|ref|XP_004142581.2| (PREDICTED: uncharacterized protein LOC101205266 [Cucumis sativus])

HSP 1 Score: 171.8 bits (434), Expect = 1.2e-39
Identity = 89/181 (49.17%), Postives = 122/181 (67.40%), Query Frame = 1

Query: 1   MDKSWMIQNRMSREYDLGVEMFIKFGLSYAKGSNSIRCPCL---NCDNHLLKNVSIFRYH 60
           MDKSWM ++R+S++Y+LGVE FIKFG S    S+ IRCPCL   NC+ H  K V   R H
Sbjct: 1   MDKSWMHKSRLSKDYELGVENFIKFGFSNTT-SSYIRCPCLKCGNCEKHSRKGV---RDH 60

Query: 61  LYANGIDKSYKVWSWYGEELISDNVTNTTKNTVDETDENDDLFNTVNMVQSVQEQSSNAF 120
           LY NGID+SYK W W+GEEL + +  + +      T E+ D+ +   M++   E+ S   
Sbjct: 61  LYVNGIDESYKFWFWHGEELPNSSFYDESSKFDTHTCEDQDVGSVKEMIEVAHEEYSKDP 120

Query: 121 NTFDTMFDDVKKPLYPRCKKFTKLSTLMRLYNLKVRYGWSNTSFSELLSIISDLLPDNNK 179
             F+ +  D +KPLY  CKK+TKLSTL++LYNLKVRYGWS+TSF ELL  + ++LP+ N+
Sbjct: 121 TGFEKLLIDAEKPLYEGCKKYTKLSTLVKLYNLKVRYGWSDTSFLELLETLKEILPNTNE 177

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A5BJV7_VITVI4.7e-4044.09Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011055 PE=4 SV=1[more]
A5ALA6_VITVI8.0e-4044.09Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030061 PE=4 SV=1[more]
A5CB63_VITVI1.2e-3843.01Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040314 PE=4 SV=1[more]
A5C4T9_VITVI4.4e-3842.47Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043919 PE=4 SV=1[more]
A5B592_VITVI9.8e-3842.78Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_019902 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|659072230|ref|XP_008464173.1|1.1e-5062.11PREDICTED: uncharacterized protein LOC103502117 [Cucumis melo][more]
gi|147779778|emb|CAN72425.1|6.8e-4044.09hypothetical protein VITISV_011055 [Vitis vinifera][more]
gi|778688696|ref|XP_011652815.1|8.8e-4049.72PREDICTED: uncharacterized protein LOC105435113 [Cucumis sativus][more]
gi|147853389|emb|CAN80205.1|1.2e-3944.09hypothetical protein VITISV_030061 [Vitis vinifera][more]
gi|778688593|ref|XP_004142581.2|1.2e-3949.17PREDICTED: uncharacterized protein LOC101205266 [Cucumis sativus][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G18630.1CSPI03G18630.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR10775UNCHARACTERIZEDcoord: 2..187
score: 4.5
NoneNo IPR availablePANTHERPTHR10775:SF98SUBFAMILY NOT NAMEDcoord: 2..187
score: 4.5

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None