CSPI03G18630 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACAAGTCATGGATGATCCAAAATAGGATGTCAAGAGAATATGATTTAGGAGTCGAAATGTTCATTAAATTTGGGTTGAGTTATGCCAAAGGTTCCAATTCAATTAGGTGTCCATGTTTGAATTGCGACAATCATTTACTTAAGAATGTCTCAATATTTCGGTATCATTTGTATGCCAATGGAATTGATAAAAGTTACAAGGTATGGTCCTGGTATGGTGAAGAATTGATCTCAGATAACGTTACCAACACGACGAAAAATACAGTGGATGAAACTGATGAAAACGACGATTTATTTAATACAGTTAATATGGTTCAATCCGTTCAAGAACAATCTTCTAATGCATTCAATACCTTTGACACTATGTTTGATGACGTGAAGAAACCCTTATACCCAAGATGTAAGAAATTCACAAAGTTGTCAACCCTCATGAGATTGTATAACCTAAAGGTTAGGTATGGTTGGAGTAATACTAGCTTCTCTGAATTACTGTCCATAATAAGTGATTTATTACCTGATAACAACAAAATTTCAATTCCTTATACGAAGCGAAGAAAACACTAG ATGGACAAGTCATGGATGATCCAAAATAGGATGTCAAGAGAATATGATTTAGGAGTCGAAATGTTCATTAAATTTGGGTTGAGTTATGCCAAAGGTTCCAATTCAATTAGGTGTCCATGTTTGAATTGCGACAATCATTTACTTAAGAATGTCTCAATATTTCGGTATCATTTGTATGCCAATGGAATTGATAAAAGTTACAAGGTATGGTCCTGGTATGGTGAAGAATTGATCTCAGATAACGTTACCAACACGACGAAAAATACAGTGGATGAAACTGATGAAAACGACGATTTATTTAATACAGTTAATATGGTTCAATCCGTTCAAGAACAATCTTCTAATGCATTCAATACCTTTGACACTATGTTTGATGACGTGAAGAAACCCTTATACCCAAGATGTAAGAAATTCACAAAGTTGTCAACCCTCATGAGATTGTATAACCTAAAGGTTAGGTATGGTTGGAGTAATACTAGCTTCTCTGAATTACTGTCCATAATAAGTGATTTATTACCTGATAACAACAAAATTTCAATTCCTTATACGAAGCGAAGAAAACACTAG ATGGACAAGTCATGGATGATCCAAAATAGGATGTCAAGAGAATATGATTTAGGAGTCGAAATGTTCATTAAATTTGGGTTGAGTTATGCCAAAGGTTCCAATTCAATTAGGTGTCCATGTTTGAATTGCGACAATCATTTACTTAAGAATGTCTCAATATTTCGGTATCATTTGTATGCCAATGGAATTGATAAAAGTTACAAGGTATGGTCCTGGTATGGTGAAGAATTGATCTCAGATAACGTTACCAACACGACGAAAAATACAGTGGATGAAACTGATGAAAACGACGATTTATTTAATACAGTTAATATGGTTCAATCCGTTCAAGAACAATCTTCTAATGCATTCAATACCTTTGACACTATGTTTGATGACGTGAAGAAACCCTTATACCCAAGATGTAAGAAATTCACAAAGTTGTCAACCCTCATGAGATTGTATAACCTAAAGGTTAGGTATGGTTGGAGTAATACTAGCTTCTCTGAATTACTGTCCATAATAAGTGATTTATTACCTGATAACAACAAAATTTCAATTCCTTATACGAAGCGAAGAAAACACTAG
BLAST of CSPI03G18630 vs. TrEMBL
Match: A5BJV7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011055 PE=4 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 4.7e-40 Identity = 82/186 (44.09%), Postives = 121/186 (65.05%), Query Frame = 1
BLAST of CSPI03G18630 vs. TrEMBL
Match: A5ALA6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030061 PE=4 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 8.0e-40 Identity = 82/186 (44.09%), Postives = 120/186 (64.52%), Query Frame = 1
BLAST of CSPI03G18630 vs. TrEMBL
Match: A5CB63_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040314 PE=4 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 1.2e-38 Identity = 80/186 (43.01%), Postives = 119/186 (63.98%), Query Frame = 1
BLAST of CSPI03G18630 vs. TrEMBL
Match: A5C4T9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043919 PE=4 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 4.4e-38 Identity = 79/186 (42.47%), Postives = 119/186 (63.98%), Query Frame = 1
BLAST of CSPI03G18630 vs. TrEMBL
Match: A5B592_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_019902 PE=4 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 9.8e-38 Identity = 80/187 (42.78%), Postives = 117/187 (62.57%), Query Frame = 1
BLAST of CSPI03G18630 vs. NCBI nr
Match: gi|659072230|ref|XP_008464173.1| (PREDICTED: uncharacterized protein LOC103502117 [Cucumis melo]) HSP 1 Score: 208.4 bits (529), Expect = 1.1e-50 Identity = 100/161 (62.11%), Postives = 123/161 (76.40%), Query Frame = 1
BLAST of CSPI03G18630 vs. NCBI nr
Match: gi|147779778|emb|CAN72425.1| (hypothetical protein VITISV_011055 [Vitis vinifera]) HSP 1 Score: 172.6 bits (436), Expect = 6.8e-40 Identity = 82/186 (44.09%), Postives = 121/186 (65.05%), Query Frame = 1
BLAST of CSPI03G18630 vs. NCBI nr
Match: gi|778688696|ref|XP_011652815.1| (PREDICTED: uncharacterized protein LOC105435113 [Cucumis sativus]) HSP 1 Score: 172.2 bits (435), Expect = 8.8e-40 Identity = 90/181 (49.72%), Postives = 121/181 (66.85%), Query Frame = 1
BLAST of CSPI03G18630 vs. NCBI nr
Match: gi|147853389|emb|CAN80205.1| (hypothetical protein VITISV_030061 [Vitis vinifera]) HSP 1 Score: 171.8 bits (434), Expect = 1.2e-39 Identity = 82/186 (44.09%), Postives = 120/186 (64.52%), Query Frame = 1
BLAST of CSPI03G18630 vs. NCBI nr
Match: gi|778688593|ref|XP_004142581.2| (PREDICTED: uncharacterized protein LOC101205266 [Cucumis sativus]) HSP 1 Score: 171.8 bits (434), Expect = 1.2e-39 Identity = 89/181 (49.17%), Postives = 122/181 (67.40%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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