CSPI03G18470 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI03G18470
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	NBS-LRR disease resistance protein
Location	Chr3 : 14116129 .. 14116781 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGAGGCCATTCTCTACATCGTTACTGAACACATCATTTTCAAATTGGGCTCTTTCGCGCTCCAAGAGCTTGGATCGCTATGGCGTGTCAATTGTGAACTTCACAAACTCAAAGACTCTCTTTCTGCCATTCAAGTCGTGCTTCACGACGCAGAGGAGCAACAATCGAAGAACAATCAAGTCAAAGATTGGGTTTTAAAGCTTGAGGATGTTTTGTATGAGATTGATGACTTGATCGATAAGTTCTCTTACCAAACCTTGAGAAGGCAAGTTATGGCCAAACACCAAAGGTACTGAAAACGAGTACGTATCCTCTTCTCCAAATTTAAATCTAATTGGGAAATAGGTTTCAAAATCAAGGAAATTAGGCCGAGGCTACTAGCTATTAATGAGGATAAAAATCAATTTAGCTTTTCTAAGGATGTGATAGAGAGAAGAGATGATGATGAAGGTTGAGAAGAGTTGGGAGACACTCTTTTGAAGTGATTGGTAGGAATGATGACAAGGAAGCAGTCATAAATCTTCTACTAAATTCCAACACCAAAGAGGATATTGCAATAGCTTCCATCGTTGGAATGGCAGGATTGGGAAAGGCTGCCCTTGTCCAATCTATTTATAACTATAAGAGGATTATGACTCGATTTCAGTAG

mRNA sequence

ATGGCTGAGGCCATTCTCTACATCGTTACTGAACACATCATTTTCAAATTGGGCTCTTTCGCGCTCCAAGAGCTTGGATCGCTATGGCGTGTCAATTGTGAACTTCACAAACTCAAAGACTCTCTTTCTGCCATTCAAGTCGTGCTTCACGACGCAGAGGAGCAACAATCGAAGAACAATCAAGTCAAAGATTGGGTTTTAAAGCTTGAGGATGTTTTGTATGAGATTGATGACTTGATCGATAAGTTCTCTTACCAAACCTTGAGAAGGCAAGTTATGGCCAAACACCAAAGGAATGATGACAAGGAAGCAGTCATAAATCTTCTACTAAATTCCAACACCAAAGAGGATATTGCAATAGCTTCCATCGTTGGAATGGCAGGATTGGGAAAGGCTGCCCTTGTCCAATCTATTTATAACTATAAGAGGATTATGACTCGATTTCAGTAG

Coding sequence (CDS)

ATGGCTGAGGCCATTCTCTACATCGTTACTGAACACATCATTTTCAAATTGGGCTCTTTCGCGCTCCAAGAGCTTGGATCGCTATGGCGTGTCAATTGTGAACTTCACAAACTCAAAGACTCTCTTTCTGCCATTCAAGTCGTGCTTCACGACGCAGAGGAGCAACAATCGAAGAACAATCAAGTCAAAGATTGGGTTTTAAAGCTTGAGGATGTTTTGTATGAGATTGATGACTTGATCGATAAGTTCTCTTACCAAACCTTGAGAAGGCAAGTTATGGCCAAACACCAAAGGAATGATGACAAGGAAGCAGTCATAAATCTTCTACTAAATTCCAACACCAAAGAGGATATTGCAATAGCTTCCATCGTTGGAATGGCAGGATTGGGAAAGGCTGCCCTTGTCCAATCTATTTATAACTATAAGAGGATTATGACTCGATTTCAGTAG

Homology

[Close]

BLAST of CSPI03G18470 vs. Swiss-Prot
Match: RGA3_SOLBU (Putative disease resistance protein RGA3 OS=Solanum bulbocastanum GN=RGA3 PE=2 SV=2)

HSP 1 Score: 58.2 bits (139), Expect = 9.2e-08
Identity = 33/89 (37.08%), Postives = 49/89 (55.06%), Query Frame = 1


Query: 1  MAEAILYIVTEHIIFKLGSFALQELGSLWRVNCELHKLKDSLSAIQVVLHDAEEQQSKNN 60
          MAEA L ++ +++ F    F   ELG ++    E  KL    S IQ VL DA+E+Q K  
Sbjct: 1  MAEAFLQVLLDNLTF----FIQGELGLVFGFEKEFKKLSSMFSMIQAVLEDAQEKQLKYK 60

Query: 61 QVKDWVLKLEDVLYEIDDLIDKFSYQTLR 90
           +K+W+ KL    YE+DD++D    +  R
Sbjct: 61 AIKNWLQKLNVAAYEVDDILDDCKTEAAR 85

[Close]

BLAST of CSPI03G18470 vs. Swiss-Prot
Match: RGA2_SOLBU (Disease resistance protein RGA2 OS=Solanum bulbocastanum GN=RGA2 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.1e-07
Identity = 31/89 (34.83%), Postives = 50/89 (56.18%), Query Frame = 1


Query: 1  MAEAILYIVTEHIIFKLGSFALQELGSLWRVNCELHKLKDSLSAIQVVLHDAEEQQSKNN 60
          MAEA + ++ ++    L SF   EL  L+    E  +L    S IQ VL DA+E+Q  N 
Sbjct: 1  MAEAFIQVLLDN----LTSFLKGELVLLFGFQDEFQRLSSMFSTIQAVLEDAQEKQLNNK 60

Query: 61 QVKDWVLKLEDVLYEIDDLIDKFSYQTLR 90
           +++W+ KL    YE+DD++D++  +  R
Sbjct: 61 PLENWLQKLNAATYEVDDILDEYKTKATR 85

[Close]

BLAST of CSPI03G18470 vs. Swiss-Prot
Match: RGA1_SOLBU (Putative disease resistance protein RGA1 OS=Solanum bulbocastanum GN=RGA1 PE=2 SV=2)

HSP 1 Score: 56.2 bits (134), Expect = 3.5e-07
Identity = 31/89 (34.83%), Postives = 50/89 (56.18%), Query Frame = 1


Query: 1  MAEAILYIVTEHIIFKLGSFALQELGSLWRVNCELHKLKDSLSAIQVVLHDAEEQQSKNN 60
          MAEA + +V ++    L SF   EL  L+    E  +L    S IQ VL DA+E+Q  + 
Sbjct: 1  MAEAFIQVVLDN----LTSFLKGELVLLFGFQDEFQRLSSMFSTIQAVLEDAQEKQLNDK 60

Query: 61 QVKDWVLKLEDVLYEIDDLIDKFSYQTLR 90
           +++W+ KL    YE+DD++D++  +  R
Sbjct: 61 PLENWLQKLNAATYEVDDILDEYKTKATR 85

[Close]

BLAST of CSPI03G18470 vs. Swiss-Prot
Match: RGA4_SOLBU (Putative disease resistance protein RGA4 OS=Solanum bulbocastanum GN=RGA4 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 6.0e-07
Identity = 31/89 (34.83%), Postives = 50/89 (56.18%), Query Frame = 1


Query: 1  MAEAILYIVTEHIIFKLGSFALQELGSLWRVNCELHKLKDSLSAIQVVLHDAEEQQSKNN 60
          MAEA L ++ E+    L SF   +L  ++    E  KL    S IQ VL DA+E+Q K+ 
Sbjct: 1  MAEAFLQVLLEN----LTSFIGDKLVLIFGFEKECEKLSSVFSTIQAVLQDAQEKQLKDK 60

Query: 61 QVKDWVLKLEDVLYEIDDLIDKFSYQTLR 90
           +++W+ KL    YE+DD++ +   + +R
Sbjct: 61 AIENWLQKLNSAAYEVDDILGECKNEAIR 85

[Close]

BLAST of CSPI03G18470 vs. TrEMBL
Match: A0A0A0LBY4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G206330 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 7.8e-46
Identity = 101/123 (82.11%), Postives = 105/123 (85.37%), Query Frame = 1


Query: 1   MAEAILYIVTEHIIFKLGSFALQELGSLWRVNCELHKLKDSLSAIQVVLHDAEEQQSKNN 60
           MAEAILYIVT HIIFKLGSFALQELGSLWRVNCELHKLKDSLSAIQVVLHDAEEQQSKNN
Sbjct: 1   MAEAILYIVTAHIIFKLGSFALQELGSLWRVNCELHKLKDSLSAIQVVLHDAEEQQSKNN 60

Query: 61  QVKDWVLKLEDVLYEIDDLIDKFSYQTLRRQVMAKHQRNDDKEAVINLLLNSNTKEDIAI 120
           QVKDWVLKLEDVLYEIDDLIDKFSYQTLRRQVMAKHQR   +  ++     SN +    I
Sbjct: 61  QVKDWVLKLEDVLYEIDDLIDKFSYQTLRRQVMAKHQRYRKRVRILFSKFKSNWEIGFKI 120

Query: 121 ASI 124
             I
Sbjct: 121 KEI 123

[Close]

BLAST of CSPI03G18470 vs. TrEMBL
Match: A0A0A0KBD9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G420890 PE=3 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 8.6e-29
Identity = 79/123 (64.23%), Postives = 88/123 (71.54%), Query Frame = 1


Query: 1   MAEAILYIVTEHIIFKLGSFALQELGSLWRVNCELHKLKDSLSAIQVVLHDAEEQQSKNN 60
           MAEAILY VT  IIFKLGS ALQELG LW VN EL KLK SLSAIQ VL DAEEQQSK+ 
Sbjct: 1   MAEAILYNVTADIIFKLGSSALQELGLLWGVNDELDKLKHSLSAIQAVLLDAEEQQSKSL 60

Query: 61  QVKDWVLKLEDVLYEIDDLIDKFSYQTLRRQVMAKHQRNDDKEAVINLLLNSNTKEDIAI 120
            VK WV +L+D LYEIDDL+D+ SY+TLRRQV+AK QR      ++     SN K D  I
Sbjct: 61  AVKAWVSRLKDALYEIDDLVDESSYETLRRQVLAKDQRKRKLVRILFSKFKSNWKIDHKI 120

Query: 121 ASI 124
             I
Sbjct: 121 KDI 123

[Close]

BLAST of CSPI03G18470 vs. TrEMBL
Match: A0A0A0K9P7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G425940 PE=3 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 2.6e-25
Identity = 61/95 (64.21%), Postives = 80/95 (84.21%), Query Frame = 1


Query: 1  MAEAILYIVTEHIIFKLGSFALQELGSLWRVNCELHKLKDSLSAIQVVLHDAEEQQSKNN 60
          MA+++L+ V   +I KLGS AL+ELGSLW VN EL KL+++LSAI+ VL DAEEQQSK++
Sbjct: 1  MADSVLFNVAASVITKLGSSALRELGSLWGVNDELDKLQNTLSAIKAVLLDAEEQQSKSH 60

Query: 61 QVKDWVLKLEDVLYEIDDLIDKFSYQTLRRQVMAK 96
           VKDW+ K++DV Y+IDDLID+FSY+TLRRQV+ K
Sbjct: 61 TVKDWIAKIKDVFYDIDDLIDEFSYETLRRQVLTK 95

[Close]

BLAST of CSPI03G18470 vs. TrEMBL
Match: A0A0A0KIT2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G375730 PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 9.9e-25
Identity = 62/106 (58.49%), Postives = 82/106 (77.36%), Query Frame = 1


Query: 1   MAEAILYIVTEHIIFKLGSFALQELGSLWRVNCELHKLKDSLSAIQVVLHDAEEQQSKNN 60
           MAE+IL  +   II KLGSFALQ+LG LW  + EL KLK ++SA++ VL DAEE+QSK+ 
Sbjct: 1   MAESILCSLAGSIITKLGSFALQDLGLLWGFHDELDKLKGTVSALEAVLLDAEEKQSKSR 60

Query: 61  QVKDWVLKLEDVLYEIDDLIDKFSYQTLRRQVMAKHQRNDDKEAVI 107
            VKDW+LKL+D  Y+IDDL+D FSY++L+RQVM KH+ N+ K+  I
Sbjct: 61  AVKDWILKLKDTFYDIDDLLDVFSYESLKRQVMTKHRTNNTKKVRI 106

[Close]

BLAST of CSPI03G18470 vs. TrEMBL
Match: A0A0A0KBE3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G425930 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.9e-24
Identity = 61/95 (64.21%), Postives = 78/95 (82.11%), Query Frame = 1


Query: 1  MAEAILYIVTEHIIFKLGSFALQELGSLWRVNCELHKLKDSLSAIQVVLHDAEEQQSKNN 60
          MA++IL+ V  ++I KLGS AL+ELGSLW VN EL KL++ LSAI+ VL DAEEQQS ++
Sbjct: 1  MADSILFNVAANVITKLGSSALRELGSLWGVNDELGKLQNILSAIKAVLLDAEEQQSVSH 60

Query: 61 QVKDWVLKLEDVLYEIDDLIDKFSYQTLRRQVMAK 96
           VKDW+ KL DV Y++DDLID+FSY+TLRRQV+ K
Sbjct: 61 AVKDWISKLRDVFYDVDDLIDEFSYETLRRQVLTK 95

[Close]

BLAST of CSPI03G18470 vs. TAIR10
Match: AT1G50180.1 (AT1G50180.1 NB-ARC domain-containing disease resistance protein)

HSP 1 Score: 50.4 bits (119), Expect = 1.1e-06
Identity = 25/83 (30.12%), Postives = 50/83 (60.24%), Query Frame = 1


Query: 1  MAEAILYIVTEHIIFKLGSFALQELGSLWRVNCELHKLKDSLSAIQVVLHDAEEQQSKNN 60
          MAEAI+ +  +    KLG   L+E   L+ +  ++ +L+D L  +   L DA+E+Q ++ 
Sbjct: 1  MAEAIVSVTVQ----KLGQLLLEEPLFLFGIGDQVKQLQDELKRLNCFLKDADEKQHESE 60

Query: 61 QVKDWVLKLEDVLYEIDDLIDKF 84
          +V++WV  + +  Y+ +D+++ F
Sbjct: 61 RVRNWVAGIREASYDAEDILEAF 79

[Close]

BLAST of CSPI03G18470 vs. TAIR10
Match: AT3G46730.1 (AT3G46730.1 NB-ARC domain-containing disease resistance protein)

HSP 1 Score: 49.3 bits (116), Expect = 2.4e-06
Identity = 29/110 (26.36%), Postives = 58/110 (52.73%), Query Frame = 1


Query: 9   VTEHIIFKLGSFALQELGSLWRVNCELHKLKDSLSAIQVVLHDAEEQQSKNNQVKDWVLK 68
           VT  ++ K+G + + E+ +L  V  +L +LK  L+ I   L D E ++ ++   K+W   
Sbjct: 5   VTGFVLNKIGGYLINEVLALMGVKDDLEELKTELTCIHGYLKDVEAREREDEVSKEWTKL 64

Query: 69  LEDVLYEIDDLID----KFSYQTLRRQVMAKHQRNDDKEAVINLLLNSNT 115
           + D+ Y+I+D++D    K   ++LRR ++    +   K    N++ +  T
Sbjct: 65  VLDIAYDIEDVLDTYFLKLEERSLRRGLLRLTNKIGKKRDAYNIVEDIRT 114

[Close]

BLAST of CSPI03G18470 vs. NCBI nr
Match: gi|700202398|gb|KGN57531.1| (hypothetical protein Csa_3G206330 [Cucumis sativus])

HSP 1 Score: 191.4 bits (485), Expect = 1.1e-45
Identity = 101/123 (82.11%), Postives = 105/123 (85.37%), Query Frame = 1


Query: 1   MAEAILYIVTEHIIFKLGSFALQELGSLWRVNCELHKLKDSLSAIQVVLHDAEEQQSKNN 60
           MAEAILYIVT HIIFKLGSFALQELGSLWRVNCELHKLKDSLSAIQVVLHDAEEQQSKNN
Sbjct: 1   MAEAILYIVTAHIIFKLGSFALQELGSLWRVNCELHKLKDSLSAIQVVLHDAEEQQSKNN 60

Query: 61  QVKDWVLKLEDVLYEIDDLIDKFSYQTLRRQVMAKHQRNDDKEAVINLLLNSNTKEDIAI 120
           QVKDWVLKLEDVLYEIDDLIDKFSYQTLRRQVMAKHQR   +  ++     SN +    I
Sbjct: 61  QVKDWVLKLEDVLYEIDDLIDKFSYQTLRRQVMAKHQRYRKRVRILFSKFKSNWEIGFKI 120

Query: 121 ASI 124
             I
Sbjct: 121 KEI 123

[Close]

BLAST of CSPI03G18470 vs. NCBI nr
Match: gi|659123000|ref|XP_008461435.1| (PREDICTED: putative disease resistance protein RGA1, partial [Cucumis melo])

HSP 1 Score: 161.4 bits (407), Expect = 1.2e-36
Identity = 86/115 (74.78%), Postives = 94/115 (81.74%), Query Frame = 1


Query: 1   MAEAILYIVTEHIIFKLGSFALQELGSLWRVNCELHKLKDSLSAIQVVLHDAEEQQSKNN 60
           MAEAILY  T  IIF LGS ALQE+GSLWRVN ELHKLK SLSAIQ VLHDAEEQQSKNN
Sbjct: 1   MAEAILYNFTADIIFTLGSSALQEIGSLWRVNSELHKLKHSLSAIQAVLHDAEEQQSKNN 60

Query: 61  QVKDWVLKLEDVLYEIDDLIDKFSYQTLRRQVMAKHQRNDDKEAVINLLLNSNTK 116
           QVKDWVLKL+DVLYEIDDLID+ SYQTLRRQV+AKH+R   +  ++     SN K
Sbjct: 61  QVKDWVLKLQDVLYEIDDLIDESSYQTLRRQVLAKHRRYRKQVRILFSKFKSNWK 115

[Close]

BLAST of CSPI03G18470 vs. NCBI nr
Match: gi|449436699|ref|XP_004136130.1| (PREDICTED: putative disease resistance protein RGA3 [Cucumis sativus])

HSP 1 Score: 134.8 bits (338), Expect = 1.2e-28
Identity = 79/123 (64.23%), Postives = 88/123 (71.54%), Query Frame = 1


Query: 1   MAEAILYIVTEHIIFKLGSFALQELGSLWRVNCELHKLKDSLSAIQVVLHDAEEQQSKNN 60
           MAEAILY VT  IIFKLGS ALQELG LW VN EL KLK SLSAIQ VL DAEEQQSK+ 
Sbjct: 1   MAEAILYNVTADIIFKLGSSALQELGLLWGVNDELDKLKHSLSAIQAVLLDAEEQQSKSL 60

Query: 61  QVKDWVLKLEDVLYEIDDLIDKFSYQTLRRQVMAKHQRNDDKEAVINLLLNSNTKEDIAI 120
            VK WV +L+D LYEIDDL+D+ SY+TLRRQV+AK QR      ++     SN K D  I
Sbjct: 61  AVKAWVSRLKDALYEIDDLVDESSYETLRRQVLAKDQRKRKLVRILFSKFKSNWKIDHKI 120

Query: 121 ASI 124
             I
Sbjct: 121 KDI 123

[Close]

BLAST of CSPI03G18470 vs. NCBI nr
Match: gi|700189863|gb|KGN45096.1| (hypothetical protein Csa_7G420890 [Cucumis sativus])

HSP 1 Score: 134.8 bits (338), Expect = 1.2e-28
Identity = 79/123 (64.23%), Postives = 88/123 (71.54%), Query Frame = 1


Query: 1   MAEAILYIVTEHIIFKLGSFALQELGSLWRVNCELHKLKDSLSAIQVVLHDAEEQQSKNN 60
           MAEAILY VT  IIFKLGS ALQELG LW VN EL KLK SLSAIQ VL DAEEQQSK+ 
Sbjct: 1   MAEAILYNVTADIIFKLGSSALQELGLLWGVNDELDKLKHSLSAIQAVLLDAEEQQSKSL 60

Query: 61  QVKDWVLKLEDVLYEIDDLIDKFSYQTLRRQVMAKHQRNDDKEAVINLLLNSNTKEDIAI 120
            VK WV +L+D LYEIDDL+D+ SY+TLRRQV+AK QR      ++     SN K D  I
Sbjct: 61  AVKAWVSRLKDALYEIDDLVDESSYETLRRQVLAKDQRKRKLVRILFSKFKSNWKIDHKI 120

Query: 121 ASI 124
             I
Sbjct: 121 KDI 123

[Close]

BLAST of CSPI03G18470 vs. NCBI nr
Match: gi|778728533|ref|XP_011659435.1| (PREDICTED: putative disease resistance protein RGA1 isoform X2 [Cucumis sativus])

HSP 1 Score: 123.2 bits (308), Expect = 3.7e-25
Identity = 61/95 (64.21%), Postives = 80/95 (84.21%), Query Frame = 1


Query: 1  MAEAILYIVTEHIIFKLGSFALQELGSLWRVNCELHKLKDSLSAIQVVLHDAEEQQSKNN 60
          MA+++L+ V   +I KLGS AL+ELGSLW VN EL KL+++LSAI+ VL DAEEQQSK++
Sbjct: 1  MADSVLFNVAASVITKLGSSALRELGSLWGVNDELDKLQNTLSAIKAVLLDAEEQQSKSH 60

Query: 61 QVKDWVLKLEDVLYEIDDLIDKFSYQTLRRQVMAK 96
           VKDW+ K++DV Y+IDDLID+FSY+TLRRQV+ K
Sbjct: 61 TVKDWIAKIKDVFYDIDDLIDEFSYETLRRQVLTK 95

The following BLAST results are available for this feature:

BLAST of CSPI03G18470 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RGA3_SOLBU	9.2e-08	37.08	Putative disease resistance protein RGA3 OS=Solanum bulbocastanum GN=RGA3 PE=2 S...	[more]
RGA2_SOLBU	2.1e-07	34.83	Disease resistance protein RGA2 OS=Solanum bulbocastanum GN=RGA2 PE=1 SV=1	[more]
RGA1_SOLBU	3.5e-07	34.83	Putative disease resistance protein RGA1 OS=Solanum bulbocastanum GN=RGA1 PE=2 S...	[more]
RGA4_SOLBU	6.0e-07	34.83	Putative disease resistance protein RGA4 OS=Solanum bulbocastanum GN=RGA4 PE=2 S...	[more]

BLAST of CSPI03G18470 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBY4_CUCSA	7.8e-46	82.11	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G206330 PE=4 SV=1	[more]
A0A0A0KBD9_CUCSA	8.6e-29	64.23	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G420890 PE=3 SV=1	[more]
A0A0A0K9P7_CUCSA	2.6e-25	64.21	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G425940 PE=3 SV=1	[more]
A0A0A0KIT2_CUCSA	9.9e-25	58.49	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G375730 PE=3 SV=1	[more]
A0A0A0KBE3_CUCSA	2.9e-24	64.21	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G425930 PE=4 SV=1	[more]

BLAST of CSPI03G18470 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G50180.1	1.1e-06	30.12	NB-ARC domain-containing disease resistance protein	[more]
AT3G46730.1	2.4e-06	26.36	NB-ARC domain-containing disease resistance protein	[more]

BLAST of CSPI03G18470 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700202398\|gb\|KGN57531.1\|	1.1e-45	82.11	hypothetical protein Csa_3G206330 [Cucumis sativus]	[more]
gi\|659123000\|ref\|XP_008461435.1\|	1.2e-36	74.78	PREDICTED: putative disease resistance protein RGA1, partial [Cucumis melo]	[more]
gi\|449436699\|ref\|XP_004136130.1\|	1.2e-28	64.23	PREDICTED: putative disease resistance protein RGA3 [Cucumis sativus]	[more]
gi\|700189863\|gb\|KGN45096.1\|	1.2e-28	64.23	hypothetical protein Csa_7G420890 [Cucumis sativus]	[more]
gi\|778728533\|ref\|XP_011659435.1\|	3.7e-25	64.21	PREDICTED: putative disease resistance protein RGA1 isoform X2 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002182	NB-ARC

Vocabulary: **Molecular Function**
Term	Definition
GO:0043531	ADP binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0043531	ADP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G18470.1	CSPI03G18470.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002182	NB-ARC	PFAM	PF00931	NB-ARC	coord: 99..148 score: 1.
None	No IPR available	unknown	Coil	Coil	coord: 35..55 scor
None	No IPR available	PANTHER	PTHR23155	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	coord: 3..148 score: 8.6
None	No IPR available	PANTHER	PTHR23155:SF609	SUBFAMILY NOT NAMED	coord: 3..148 score: 8.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI03G18470	Csa3G206330	Cucumber (Chinese Long) v2	cpicuB120
CSPI03G18470	CsaV3_3G018520	Cucumber (Chinese Long) v3	cpicucB144
CSPI03G18470	CsGy3G018310	Cucumber (Gy14) v2	cgybcpiB110

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI03G18470	Bottle gourd (USVL1VR-Ls)	cpilsiB188
CSPI03G18470	Bottle gourd (USVL1VR-Ls)	cpilsiB209
CSPI03G18470	Melon (DHL92) v3.6.1	cpimedB239
CSPI03G18470	Cucumber (Gy14) v2	cgybcpiB315
CSPI03G18470	Silver-seed gourd	carcpiB0405
CSPI03G18470	Silver-seed gourd	carcpiB0685
CSPI03G18470	Cucumber (Chinese Long) v3	cpicucB193
CSPI03G18470	Watermelon (97103) v2	cpiwmbB203
CSPI03G18470	Watermelon (97103) v2	cpiwmbB221
CSPI03G18470	Wax gourd	cpiwgoB283
CSPI03G18470	Wild cucumber (PI 183967)	cpicpiB144
CSPI03G18470	Cucumber (Gy14) v1	cgycpiB333
CSPI03G18470	Cucumber (Gy14) v1	cgycpiB366
CSPI03G18470	Cucurbita maxima (Rimu)	cmacpiB125
CSPI03G18470	Cucurbita maxima (Rimu)	cmacpiB326
CSPI03G18470	Cucurbita maxima (Rimu)	cmacpiB520
CSPI03G18470	Cucurbita maxima (Rimu)	cmacpiB705
CSPI03G18470	Cucurbita moschata (Rifu)	cmocpiB120
CSPI03G18470	Cucurbita moschata (Rifu)	cmocpiB315
CSPI03G18470	Cucurbita moschata (Rifu)	cmocpiB510
CSPI03G18470	Cucurbita moschata (Rifu)	cmocpiB698
CSPI03G18470	Cucumber (Chinese Long) v2	cpicuB165
CSPI03G18470	Melon (DHL92) v3.5.1	cpimeB241
CSPI03G18470	Watermelon (Charleston Gray)	cpiwcgB217
CSPI03G18470	Watermelon (Charleston Gray)	cpiwcgB237
CSPI03G18470	Watermelon (97103) v1	cpiwmB242
CSPI03G18470	Watermelon (97103) v1	cpiwmB271
CSPI03G18470	Cucurbita pepo (Zucchini)	cpecpiB208
CSPI03G18470	Cucurbita pepo (Zucchini)	cpecpiB388