CSPI03G16280 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI03G16280
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Embryo-specific 3
Location	Chr3 : 12180917 .. 12182825 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAATTTCATTCAAACCAACCTTTCCCTATTCCACACTTCAATGGACAAAACATCAAGCTCTCTACACATGGCGACGCCTCTACTTCCTTTCTTCTTCTTCTCCTTCTTCTCCATTTCCGCCGCTCAGTCAACCGCTTCTAAATCCTTATCCATCGCCTATATTCGGGTTCCCTTTATCATTCTACTTCACTTTTTTCTTTCACTCCTCCATTCATGTTCTTATCTCACTCTCTTCTCTTCTTCTTTTCCTATTTTCACGTGAAGGAAGCCGGAGATTGCAATTACAGAGTCAATATAACAACTAGCTGCTCATCCCCTTTCTATATTAGTTCCGAAATCGGCGTTCTCTTTGGGGACGCTCAAGGGAATCAGGTTCGTTTTAATCTTCCCAGATTTTGCTTTTAATTTACTTTGCAATTACTTCATCTCTCGAAGCCTTTAGACTGTAGAGAATAAAATTAAATTAGTTCGTCTTCGTGGTGCTGAAGTTTCATTTAATATGGTTGTTTTGCTAATCTGCTTAGTTAAGGTTTTTTATTTTTTTTTTTATTTTTTTTATTTTAAATATTCGAGTTTTGAATTGCAAGGAAAGAACAAATTAGTGCTTTAGAACGTGTGGACTTTCCTTTTCCTTTTTTGAAATTAAAGTTTGAGGAAATATATTCATTAAGATTTCTTGAGAGTCCTTCGTCAATTTGGGATTCTCTTACACTTTCTTATATTTTATTGAATGAATGGAAATTTGATAGTAGAAACTTATAATCTGTTTTCGAAGATGTTTATTGTTACATGTAATCTATTATGTCATGGTTCGCAATCAATATTATATATCTATCACCTAAAAATAGTTTTGAAACTAAAATCAAAATTTTGCTTAAGAACAGCAGGTAGTAGCACTGTTAGTCATTCAATTCAACTTAAAAATTATATTTCGTCATTACAGTAATCTGTCATCTAATCAGAACCTAAGTACAGTTGGTGGCTTTAAACAATTGGAAACATAGATGTTCATTGAATAGATAAAATGAACAAAATACATACCATCTATGGTTGGTTTTTATTCAATACTATAATGAAAATGAATGATAAGGACAAAAGAACTTTGTATTTATGTAGTAGGTTTGGTTTTGAACCTATTTTCTCTTAATTTTTCTTTTACAGTGGTTTGGATCTTTCCAAAATGGTTGAATTGTAGATATTTCTAGAACTCTCTTATCGAGACATTTAAAGAAGAAAAGAGAAAAGGGAAAATAAATTTCTGTTTGACCAACCTTTATACTTTATGTTTCCTGTTCAAATTATGTTTGGATAAGAATGACTAATTTAGAATTTGAAAAGTAGATATATGAGCCAAAGCTAGAAGTTGAAAGCGGGAATGCATTTAGGAAATGCAGAAAAGACATATTTGAACTGATAGGACCATGCATAGACCAGATATGTTTCTTTTATCTTTACAAGAACGGCTCAGACAATTGGATTCCAGAGACTGTAGAAATCTCCAGCCCTGACATTGACACTGTTAAATACACGTACAACTCCTCAATCCCGAATGACACATGGTATGGCTTTGAAGACTGCCAATACTTTCCGTCACCATCACCGCCACCACCACCGCCTCCATCAGTCCCTTCCACAGCCGGCTCTCTGCCAAGGTGGAAATGGATTGCTTCTCTCATCCCTGTGCTTTTCAGCTGCTTTTTGCTGTGAATGTTATTCTCACTCTGTATTATGGCTTTTGGCTTGGTGGACTAGATATATTTTTTGTTTCTATTTTGATCCACCGCTGTGTTTGTATTTGTACTGTATTTTTTAATTTGATGATCACATGAATAGCTGTGTAATTCAACTTTGATATATGTAGAAATGGATTTGATGGAGTTGTGCTATGATTGTTGAATATGGAGGAAC

mRNA sequence

ATGTTCTTATCTCACTCTCTTCTCTTCTTCTTTTCCTATTTTCACGTGAAGGAAGCCGGAGATTGCAATTACAGAGTCAATATAACAACTAGCTGCTCATCCCCTTTCTATATTAGTTCCGAAATCGGCGTTCTCTTTGGGGACGCTCAAGGGAATCAGATATATGAGCCAAAGCTAGAAGTTGAAAGCGGGAATGCATTTAGGAAATGCAGAAAAGACATATTTGAACTGATAGGACCATGCATAGACCAGATATGTTTCTTTTATCTTTACAAGAACGGCTCAGACAATTGGATTCCAGAGACTGTAGAAATCTCCAGCCCTGACATTGACACTGTTAAATACACGTACAACTCCTCAATCCCGAATGACACATGGTATGGCTTTGAAGACTGCCAATACTTTCCGTCACCATCACCGCCACCACCACCGCCTCCATCAGTCCCTTCCACAGCCGGCTCTCTGCCAAGGTGGAAATGGATTGCTTCTCTCATCCCTGTGCTTTTCAGCTGCTTTTTGCTGTGA

Coding sequence (CDS)

ATGTTCTTATCTCACTCTCTTCTCTTCTTCTTTTCCTATTTTCACGTGAAGGAAGCCGGAGATTGCAATTACAGAGTCAATATAACAACTAGCTGCTCATCCCCTTTCTATATTAGTTCCGAAATCGGCGTTCTCTTTGGGGACGCTCAAGGGAATCAGATATATGAGCCAAAGCTAGAAGTTGAAAGCGGGAATGCATTTAGGAAATGCAGAAAAGACATATTTGAACTGATAGGACCATGCATAGACCAGATATGTTTCTTTTATCTTTACAAGAACGGCTCAGACAATTGGATTCCAGAGACTGTAGAAATCTCCAGCCCTGACATTGACACTGTTAAATACACGTACAACTCCTCAATCCCGAATGACACATGGTATGGCTTTGAAGACTGCCAATACTTTCCGTCACCATCACCGCCACCACCACCGCCTCCATCAGTCCCTTCCACAGCCGGCTCTCTGCCAAGGTGGAAATGGATTGCTTCTCTCATCCCTGTGCTTTTCAGCTGCTTTTTGCTGTGA

Homology

[Close]

BLAST of CSPI03G16280 vs. TrEMBL
Match: A0A0A0L8G7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G177970 PE=4 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 9.8e-113
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 1


Query: 1   MDKTSSSLHMATPLLPFFFFSFFSISAAQSTASKSLSIAYIREAGDCNYRVNITTSCSSP 60
           MDKTSSSLHMATPLLPFFFFSFFSISAAQSTASKSLSIAYIREAGDCNYRVNITTSCSSP
Sbjct: 1   MDKTSSSLHMATPLLPFFFFSFFSISAAQSTASKSLSIAYIREAGDCNYRVNITTSCSSP 60

Query: 61  FYISSEIGVLFGDAQGNQIYEPKLEVESGNAFRKCRKDIFELIGPCIDQICFFYLYKNGS 120
           FYISSEIGVLFGDAQGNQIYEPKLEVESGNAFRKCRKDIFELIGPCIDQICFFYLYKNGS
Sbjct: 61  FYISSEIGVLFGDAQGNQIYEPKLEVESGNAFRKCRKDIFELIGPCIDQICFFYLYKNGS 120

Query: 121 DNWIPETVEISSPDIDTVKYTYNSSIPNDTWYGFEDCQYFPSPSPPPPPPPSVPSTAGSL 180
           DNWIPETVEISSPDIDTVKYTYNSSIPNDTWYGFEDCQYFPSPSPPPPPPPSVPSTAGSL
Sbjct: 121 DNWIPETVEISSPDIDTVKYTYNSSIPNDTWYGFEDCQYFPSPSPPPPPPPSVPSTAGSL 180

Query: 181 PRWKWIASLIPVLFSCFLL 200
           PRWKWIASLIPVLFSCFLL
Sbjct: 181 PRWKWIASLIPVLFSCFLL 199

[Close]

BLAST of CSPI03G16280 vs. TrEMBL
Match: B9ICY2_POPTR (Embryo-specific family protein OS=Populus trichocarpa GN=POPTR_0015s14220g PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.9e-32
Identity = 72/159 (45.28%), Postives = 94/159 (59.12%), Query Frame = 1


Query: 6   SSLHMATPLLPFFFFSFFS------ISAAQSTASKSLSIAYIREAGDCNYRVNITTSCSS 65
           +S H       FFF    S      IS  Q    +S +++ ++ AG C Y V I+TSCSS
Sbjct: 3   NSHHSLLSYFAFFFVLGLSQADQSIISHLQPQPLESFNLSLVQNAGSCYYTVLISTSCSS 62

Query: 66  PFYISSEIGVLFGDAQGNQIYEPKLEVESGNAFRKCRKDIFELIGPCIDQICFFYLYKNG 125
           P Y   +IG+ FGDA GNQIY P+L+  S   F +C  D F++ GPC  QIC+ YLY++G
Sbjct: 63  PRYTRDQIGISFGDAYGNQIYTPRLDDPSTGTFERCSSDTFQISGPCAYQICYVYLYRSG 122

Query: 126 SDNWIPETVEISSPDIDTVKYTYNSSIPNDTWYGFEDCQ 159
            D W P+TV+IS     TV +TYN+ IP D WYGF  CQ
Sbjct: 123 RDGWKPDTVQISGYYSRTVTFTYNTFIPRDVWYGFNLCQ 161

[Close]

BLAST of CSPI03G16280 vs. TrEMBL
Match: A0A067JQT7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26201 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.9e-32
Identity = 68/149 (45.64%), Postives = 96/149 (64.43%), Query Frame = 1


Query: 15  LPFFFFSFFSISAAQSTASK-----SLSIAYIREAGDCNYRVNITTSCSSPFYISSEIGV 74
           L F+F   F  S A+S + K     S +++ I+  G C+YRV ++TSCSSP Y   +I +
Sbjct: 26  LLFYFALLFIQSKAESISLKPQALDSFNLSLIQNVGSCSYRVIVSTSCSSPKYTRDQISL 85

Query: 75  LFGDAQGNQIYEPKLEVESGNAFRKCRKDIFELIGPCIDQICFFYLYKNGSDNWIPETVE 134
            FGDA GNQIY P+L+  S N F +C  D F++ GPC  QIC+ YLY+ G D W PE+V+
Sbjct: 86  SFGDAYGNQIYAPRLDDPSSNTFERCSSDTFQISGPCAYQICYVYLYRTGPDGWKPESVK 145

Query: 135 ISSPDIDTVKYTYNSSIPNDTWYGFEDCQ 159
           I   + + V++ YN+ IP++TWYGF  CQ
Sbjct: 146 IYGYNSNPVRFDYNTFIPSNTWYGFNLCQ 174

[Close]

BLAST of CSPI03G16280 vs. TrEMBL
Match: A0A151QN85_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_047784 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 3.8e-32
Identity = 71/177 (40.11%), Postives = 104/177 (58.76%), Query Frame = 1


Query: 21  SFFSISAAQST-----ASKSLSIAYI--REAGDCNYRVNITTSCSSPFYISSEIGVLFGD 80
           S  S+S +QS      A++S +++YI  + AG C+Y V I+TSCSSP Y    + + FGD
Sbjct: 16  STLSVSESQSASLLPHAAESFNVSYIQMKNAGSCSYSVAISTSCSSPRYTRDHVSIAFGD 75

Query: 81  AQGNQIYEPKLEVESGNAFRKCRKDIFELIGPCIDQICFFYLYKNGSDNWIPETVEISSP 140
           A GNQIY P+L+  +   F  C  D F++ GPC  QIC+ YLY++GSD W PE+V+I+S 
Sbjct: 76  AYGNQIYAPRLDDPASGTFESCSSDTFQISGPCAYQICYVYLYRSGSDGWKPESVKINSY 135

Query: 141 DIDTVKYTYNSSIPNDTWYGFEDCQYFPSPSPPPPPPPSVPSTAGSLPRWKWIASLI 191
           +   V + YN+ +P DTWYGF+ C              S  ST+  +   KW+  ++
Sbjct: 136 NGRPVTFYYNTYVPRDTWYGFDLCN-------------SASSTSSQVSMQKWLIFMV 179

[Close]

BLAST of CSPI03G16280 vs. TrEMBL
Match: I3T619_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.5e-31
Identity = 68/141 (48.23%), Postives = 93/141 (65.96%), Query Frame = 1


Query: 24  SISAAQST-----ASKSLSIAYI--REAGDCNYRVNITTSCSSPFYISSEIGVLFGDAQG 83
           S+S +QS      A++S +I+YI  + AG C+Y V I+TSCSSP Y S +I + FGDA G
Sbjct: 21  SVSESQSVSLLPHANESFNISYIQMKNAGSCSYFVVISTSCSSPRYTSDQISIAFGDAYG 80

Query: 84  NQIYEPKLEVESGNAFRKCRKDIFELIGPCIDQICFFYLYKNGSDNWIPETVEISSPDID 143
           NQIY P+L+  S   F  C  D F++ GPC  QIC+ YLY++GS  W PE+V+I+  + +
Sbjct: 81  NQIYAPRLDDPSSGTFESCSSDTFQINGPCAYQICYVYLYRSGSSGWKPESVKINGYNGE 140

Query: 144 TVKYTYNSSIPNDTWYGFEDC 158
            V + YN+ IP DTWYGF  C
Sbjct: 141 PVTFYYNTFIPRDTWYGFNLC 161

[Close]

BLAST of CSPI03G16280 vs. TAIR10
Match: AT5G62200.1 (AT5G62200.1 Embryo-specific protein 3, (ATS3))

HSP 1 Score: 126.7 bits (317), Expect = 1.6e-29
Identity = 66/158 (41.77%), Postives = 88/158 (55.70%), Query Frame = 1


Query: 10  MATPLLPFFFFSFFSISAAQSTASK---------SLSIAYIREAGD-CNYRVNITTSCSS 69
           MA+  L F   SF  I +     SK         S +++ I++ G+ C Y V I+TSCSS
Sbjct: 1   MASVRLFFTLISFVFIISTSVYESKVLDPPHVAESFNVSLIQKLGNTCAYTVIISTSCSS 60

Query: 70  PFYISSEIGVLFGDAQGNQIYEPKLEVESGNAFRKCRKDIFELIGPCIDQICFFYLYKNG 129
             Y   +I V FGD  GNQIY P+L+  S   F +C  D F++ GPC  QIC+ YLY++G
Sbjct: 61  TRYTRDQISVAFGDGYGNQIYAPRLDDPSTKTFEQCSSDTFQINGPCTYQICYVYLYRSG 120

Query: 130 SDNWIPETVEISSPDIDTVKYTYNSSIPNDTWYGFEDC 158
            D WIP TV+I S     V + YN+ +P   WYGF  C
Sbjct: 121 PDGWIPNTVKIYSHGSKAVTFPYNTYVPESVWYGFNYC 158

[Close]

BLAST of CSPI03G16280 vs. TAIR10
Match: AT5G62210.1 (AT5G62210.1 Embryo-specific protein 3, (ATS3))

HSP 1 Score: 123.2 bits (308), Expect = 1.8e-28
Identity = 62/165 (37.58%), Postives = 86/165 (52.12%), Query Frame = 1


Query: 41  IREAGDCNYRVNITTSCSSPFYISSEIGVLFGDAQGNQIYEPKLE--VESGNAFRKCRKD 100
           + E   C Y V +TTSC SP +   ++ +  GDA  NQ+  P+L+  +  G  F KC  D
Sbjct: 34  LHEEESCPYTVIVTTSCFSPDWSRDQVTIALGDADDNQVVAPRLDKPLSGGGGFEKCSSD 93

Query: 101 IFELIGPCIDQICFFYLYKNGSDNWIPETVEISSPDIDTVKYTYNSSIPNDTWYGFEDCQ 160
            F++ G C++ IC  Y+Y++G+D WIPETVEI      +VK+ +N ++P + WYG   C 
Sbjct: 94  TFQVKGKCLNTICSVYIYRSGTDGWIPETVEIYKEGSKSVKFDFNKNVPENIWYGNNYCN 153

Query: 161 ------------------------YFP--SPSPPPPPPPSVPSTA 178
                                   YFP   PS PPPPPPS PS A
Sbjct: 154 NTDLPPPSPDFPPFSPSIPPPSPPYFPPEPPSIPPPPPPSPPSAA 198

[Close]

BLAST of CSPI03G16280 vs. TAIR10
Match: AT2G41475.1 (AT2G41475.1 Embryo-specific protein 3, (ATS3))

HSP 1 Score: 122.9 bits (307), Expect = 2.3e-28
Identity = 62/157 (39.49%), Postives = 85/157 (54.14%), Query Frame = 1


Query: 8   LHMATPLLPFFFFSFFSISAAQS-TASKSLSI------AYIREAGDCNYRVNITTSCSSP 67
           L +A PL  F   SF   S+A+S   +K L I        +  A  C+Y V I TSCSS 
Sbjct: 2   LRLAIPLFLFALCSFTLFSSARSFITTKPLPIDSFIPKPKLENAAACSYTVIIKTSCSSV 61

Query: 68  FYISSEIGVLFGDAQGNQIYEPKLEVESGNAFRKCRKDIFELIGPCIDQICFFYLYKNGS 127
            Y   +I + FGD  GN++Y  +L+  S   F KC  D +++ GPC+  +C+ YL + GS
Sbjct: 62  SYTRDKISISFGDVYGNEVYVKRLDDPSSRTFEKCSSDTYKISGPCMRDVCYLYLLRQGS 121

Query: 128 DNWIPETVEISSPDIDTVKYTYNSSIPNDTWYGFEDC 158
           D W PE V+I    I +V + YN  +PN  WYGF  C
Sbjct: 122 DGWKPENVKIYGSSIRSVTFYYNLFLPNSVWYGFNVC 158

[Close]

BLAST of CSPI03G16280 vs. TAIR10
Match: AT5G07190.1 (AT5G07190.1 seed gene 3)

HSP 1 Score: 115.5 bits (288), Expect = 3.7e-26
Identity = 69/186 (37.10%), Postives = 98/186 (52.69%), Query Frame = 1


Query: 17  FFFFSFFSISAAQSTASKSLSIAYIREAGDCNYRVNITTSCSSPFYISSEIGVLFGDAQG 76
           F FF+F  +     T +  LSI  +++ G C Y V + TSC SP     +I ++FGDA G
Sbjct: 10  FLFFAFIFV-----THAFDLSIIQMQQ-GTCPYTVVVMTSCLSPESTRDQISIVFGDADG 69

Query: 77  NQIYEPKLE--VESGNAFRKCRKDIFELIGPCI-DQICFFYLYKNGSDNWIPETVEISSP 136
           N++Y PKL   V       KC  + F++ G C+ D IC  Y+ +NG D W+PE++EI S 
Sbjct: 70  NKVYAPKLGGLVRGPGGLGKCSTNTFQVRGQCLNDPICSLYINRNGPDGWVPESIEIYSE 129

Query: 137 DIDTVKYTYNSSIPN-DTWYGFEDCQ-------------YFPSPSPP-----PPPPPSVP 181
              +VK+ ++ S+P  +TWYG  +C              +FP   PP     PPPPP  P
Sbjct: 130 GSKSVKFDFSKSVPQLNTWYGHNNCNTTGRPSSPDLPPPHFPPEFPPETPTTPPPPPPRP 189

[Close]

BLAST of CSPI03G16280 vs. NCBI nr
Match: gi|449460842|ref|XP_004148153.1| (PREDICTED: uncharacterized protein LOC101215783 [Cucumis sativus])

HSP 1 Score: 414.1 bits (1063), Expect = 1.4e-112
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 1


Query: 1   MDKTSSSLHMATPLLPFFFFSFFSISAAQSTASKSLSIAYIREAGDCNYRVNITTSCSSP 60
           MDKTSSSLHMATPLLPFFFFSFFSISAAQSTASKSLSIAYIREAGDCNYRVNITTSCSSP
Sbjct: 1   MDKTSSSLHMATPLLPFFFFSFFSISAAQSTASKSLSIAYIREAGDCNYRVNITTSCSSP 60

Query: 61  FYISSEIGVLFGDAQGNQIYEPKLEVESGNAFRKCRKDIFELIGPCIDQICFFYLYKNGS 120
           FYISSEIGVLFGDAQGNQIYEPKLEVESGNAFRKCRKDIFELIGPCIDQICFFYLYKNGS
Sbjct: 61  FYISSEIGVLFGDAQGNQIYEPKLEVESGNAFRKCRKDIFELIGPCIDQICFFYLYKNGS 120

Query: 121 DNWIPETVEISSPDIDTVKYTYNSSIPNDTWYGFEDCQYFPSPSPPPPPPPSVPSTAGSL 180
           DNWIPETVEISSPDIDTVKYTYNSSIPNDTWYGFEDCQYFPSPSPPPPPPPSVPSTAGSL
Sbjct: 121 DNWIPETVEISSPDIDTVKYTYNSSIPNDTWYGFEDCQYFPSPSPPPPPPPSVPSTAGSL 180

Query: 181 PRWKWIASLIPVLFSCFLL 200
           PRWKWIASLIPVLFSCFLL
Sbjct: 181 PRWKWIASLIPVLFSCFLL 199

[Close]

BLAST of CSPI03G16280 vs. NCBI nr
Match: gi|659077284|ref|XP_008439124.1| (PREDICTED: uncharacterized protein LOC103484014 isoform X1 [Cucumis melo])

HSP 1 Score: 376.3 bits (965), Expect = 3.3e-101
Identity = 184/205 (89.76%), Postives = 190/205 (92.68%), Query Frame = 1


Query: 1   MDKTSSSLHMATPLLPFFFFSFFSISAAQST------ASKSLSIAYIREAGDCNYRVNIT 60
           M + SSSL+MATPLLPFF FS FSISA+QST      ASKSLSIAYIREAGDCNYRVNIT
Sbjct: 1   MKQKSSSLNMATPLLPFFIFSLFSISASQSTGSLPQPASKSLSIAYIREAGDCNYRVNIT 60

Query: 61  TSCSSPFYISSEIGVLFGDAQGNQIYEPKLEVESGNAFRKCRKDIFELIGPCIDQICFFY 120
           TSCSSPFYISSEIGVLFGDA GNQIYEPKLEVESGNAF KCRKDIFELIGPC DQICFFY
Sbjct: 61  TSCSSPFYISSEIGVLFGDAHGNQIYEPKLEVESGNAFGKCRKDIFELIGPCTDQICFFY 120

Query: 121 LYKNGSDNWIPETVEISSPDIDTVKYTYNSSIPNDTWYGFEDCQYFPSPSPPPPPPPSVP 180
           LYKNGSD+WIPETVEISSPDIDTVKYTYNSSIPNDTWYGF+DCQYFPSPSPPPPPPPSVP
Sbjct: 121 LYKNGSDDWIPETVEISSPDIDTVKYTYNSSIPNDTWYGFDDCQYFPSPSPPPPPPPSVP 180

Query: 181 STAGSLPRWKWIASLIPVLFSCFLL 200
           STAG LPRWKW+ASLIPVLFS FLL
Sbjct: 181 STAGCLPRWKWLASLIPVLFSSFLL 205

[Close]

BLAST of CSPI03G16280 vs. NCBI nr
Match: gi|659077286|ref|XP_008439125.1| (PREDICTED: uncharacterized protein LOC103484014 isoform X2 [Cucumis melo])

HSP 1 Score: 238.0 bits (606), Expect = 1.4e-59
Identity = 133/205 (64.88%), Postives = 140/205 (68.29%), Query Frame = 1


Query: 1   MDKTSSSLHMATPLLPFFFFSFFSISAAQST------ASKSLSIAYIREAGDCNYRVNIT 60
           M + SSSL+MATPLLPFF FS FSISA+QST      ASKSLSIAYIREAGDCNYRVNIT
Sbjct: 1   MKQKSSSLNMATPLLPFFIFSLFSISASQSTGSLPQPASKSLSIAYIREAGDCNYRVNIT 60

Query: 61  TSCSSPFYISSEIGVLFGDAQGNQIYEPKLEVESGNAFRKCRKDIFELIGPCIDQICFFY 120
           TSCSSPFYISSEIGVLFGDA GNQ           N       +  E+  P ID      
Sbjct: 61  TSCSSPFYISSEIGVLFGDAHGNQ-----------NGSDDWIPETVEISSPDIDT----- 120

Query: 121 LYKNGSDNWIPETVEISSPDIDTVKYTYNSSIPNDTWYGFEDCQYFPSPSPPPPPPPSVP 180
                                  VKYTYNSSIPNDTWYGF+DCQYFPSPSPPPPPPPSVP
Sbjct: 121 -----------------------VKYTYNSSIPNDTWYGFDDCQYFPSPSPPPPPPPSVP 166

Query: 181 STAGSLPRWKWIASLIPVLFSCFLL 200
           STAG LPRWKW+ASLIPVLFS FLL
Sbjct: 181 STAGCLPRWKWLASLIPVLFSSFLL 166

[Close]

BLAST of CSPI03G16280 vs. NCBI nr
Match: gi|224134573|ref|XP_002321856.1| (embryo-specific family protein [Populus trichocarpa])

HSP 1 Score: 146.7 bits (369), Expect = 4.2e-32
Identity = 72/159 (45.28%), Postives = 94/159 (59.12%), Query Frame = 1


Query: 6   SSLHMATPLLPFFFFSFFS------ISAAQSTASKSLSIAYIREAGDCNYRVNITTSCSS 65
           +S H       FFF    S      IS  Q    +S +++ ++ AG C Y V I+TSCSS
Sbjct: 3   NSHHSLLSYFAFFFVLGLSQADQSIISHLQPQPLESFNLSLVQNAGSCYYTVLISTSCSS 62

Query: 66  PFYISSEIGVLFGDAQGNQIYEPKLEVESGNAFRKCRKDIFELIGPCIDQICFFYLYKNG 125
           P Y   +IG+ FGDA GNQIY P+L+  S   F +C  D F++ GPC  QIC+ YLY++G
Sbjct: 63  PRYTRDQIGISFGDAYGNQIYTPRLDDPSTGTFERCSSDTFQISGPCAYQICYVYLYRSG 122

Query: 126 SDNWIPETVEISSPDIDTVKYTYNSSIPNDTWYGFEDCQ 159
            D W P+TV+IS     TV +TYN+ IP D WYGF  CQ
Sbjct: 123 RDGWKPDTVQISGYYSRTVTFTYNTFIPRDVWYGFNLCQ 161

[Close]

BLAST of CSPI03G16280 vs. NCBI nr
Match: gi|802769484|ref|XP_012090371.1| (PREDICTED: uncharacterized protein LOC105648558 [Jatropha curcas])

HSP 1 Score: 146.7 bits (369), Expect = 4.2e-32
Identity = 68/149 (45.64%), Postives = 96/149 (64.43%), Query Frame = 1


Query: 15  LPFFFFSFFSISAAQSTASK-----SLSIAYIREAGDCNYRVNITTSCSSPFYISSEIGV 74
           L F+F   F  S A+S + K     S +++ I+  G C+YRV ++TSCSSP Y   +I +
Sbjct: 26  LLFYFALLFIQSKAESISLKPQALDSFNLSLIQNVGSCSYRVIVSTSCSSPKYTRDQISL 85

Query: 75  LFGDAQGNQIYEPKLEVESGNAFRKCRKDIFELIGPCIDQICFFYLYKNGSDNWIPETVE 134
            FGDA GNQIY P+L+  S N F +C  D F++ GPC  QIC+ YLY+ G D W PE+V+
Sbjct: 86  SFGDAYGNQIYAPRLDDPSSNTFERCSSDTFQISGPCAYQICYVYLYRTGPDGWKPESVK 145

Query: 135 ISSPDIDTVKYTYNSSIPNDTWYGFEDCQ 159
           I   + + V++ YN+ IP++TWYGF  CQ
Sbjct: 146 IYGYNSNPVRFDYNTFIPSNTWYGFNLCQ 174

The following BLAST results are available for this feature:

BLAST of CSPI03G16280 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI03G16280 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8G7_CUCSA	9.8e-113	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G177970 PE=4 SV=1	[more]
B9ICY2_POPTR	2.9e-32	45.28	Embryo-specific family protein OS=Populus trichocarpa GN=POPTR_0015s14220g PE=4 ...	[more]
A0A067JQT7_JATCU	2.9e-32	45.64	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26201 PE=4 SV=1	[more]
A0A151QN85_CAJCA	3.8e-32	40.11	Uncharacterized protein OS=Cajanus cajan GN=KK1_047784 PE=4 SV=1	[more]
I3T619_MEDTR	1.5e-31	48.23	Uncharacterized protein OS=Medicago truncatula PE=2 SV=1	[more]

BLAST of CSPI03G16280 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G62200.1	1.6e-29	41.77	Embryo-specific protein 3, (ATS3)	[more]
AT5G62210.1	1.8e-28	37.58	Embryo-specific protein 3, (ATS3)	[more]
AT2G41475.1	2.3e-28	39.49	Embryo-specific protein 3, (ATS3)	[more]
AT5G07190.1	3.7e-26	37.10	seed gene 3	[more]

BLAST of CSPI03G16280 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449460842\|ref\|XP_004148153.1\|	1.4e-112	100.00	PREDICTED: uncharacterized protein LOC101215783 [Cucumis sativus]	[more]
gi\|659077284\|ref\|XP_008439124.1\|	3.3e-101	89.76	PREDICTED: uncharacterized protein LOC103484014 isoform X1 [Cucumis melo]	[more]
gi\|659077286\|ref\|XP_008439125.1\|	1.4e-59	64.88	PREDICTED: uncharacterized protein LOC103484014 isoform X2 [Cucumis melo]	[more]
gi\|224134573\|ref\|XP_002321856.1\|	4.2e-32	45.28	embryo-specific family protein [Populus trichocarpa]	[more]
gi\|802769484\|ref\|XP_012090371.1\|	4.2e-32	45.64	PREDICTED: uncharacterized protein LOC105648558 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001024	PLAT/LH2_dom
IPR010417	Embryo-specific_ATS3
IPR001024	PLAT/LH2_dom
IPR010417	Embryo-specific_ATS3

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G16280.2	CSPI03G16280.2	mRNA
CSPI03G16280.1	CSPI03G16280.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001024	PLAT/LH2 domain	unknown	SSF49723	Lipase/lipooxygenase domain (PLAT/LH2 domain)	coord: 20..129 score: 2.45
IPR010417	Embryo-specific 3	PFAM	PF06232	ATS3	coord: 16..132 score: 3.6
None	No IPR available	GENE3D	G3DSA:1.10.8.240		coord: 107..131 score: 5.
None	No IPR available	PANTHER	PTHR31718	FAMILY NOT NAMED	coord: 9..156 score: 1.1
None	No IPR available	PANTHER	PTHR31718:SF8	EMBRYO-SPECIFIC PROTEIN 3	coord: 9..156 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI03G16280	Bottle gourd (USVL1VR-Ls)	cpilsiB155
CSPI03G16280	Bottle gourd (USVL1VR-Ls)	cpilsiB208
CSPI03G16280	Melon (DHL92) v3.6.1	cpimedB154
CSPI03G16280	Melon (DHL92) v3.6.1	cpimedB167
CSPI03G16280	Melon (DHL92) v3.6.1	cpimedB224
CSPI03G16280	Cucumber (Gy14) v2	cgybcpiB110
CSPI03G16280	Cucumber (Gy14) v2	cgybcpiB213
CSPI03G16280	Cucumber (Gy14) v2	cgybcpiB275
CSPI03G16280	Silver-seed gourd	carcpiB0112
CSPI03G16280	Silver-seed gourd	carcpiB0745
CSPI03G16280	Silver-seed gourd	carcpiB0905
CSPI03G16280	Silver-seed gourd	carcpiB0955
CSPI03G16280	Silver-seed gourd	carcpiB0976
CSPI03G16280	Cucumber (Chinese Long) v3	cpicucB144
CSPI03G16280	Cucumber (Chinese Long) v3	cpicucB169
CSPI03G16280	Cucumber (Chinese Long) v3	cpicucB190
CSPI03G16280	Watermelon (97103) v2	cpiwmbB181
CSPI03G16280	Watermelon (97103) v2	cpiwmbB209
CSPI03G16280	Watermelon (97103) v2	cpiwmbB243
CSPI03G16280	Wild cucumber (PI 183967)	cpicpiB113
CSPI03G16280	Wild cucumber (PI 183967)	cpicpiB116
CSPI03G16280	Wild cucumber (PI 183967)	cpicpiB139
CSPI03G16280	Cucumber (Gy14) v1	cgycpiB383
CSPI03G16280	Cucumber (Gy14) v1	cgycpiB453
CSPI03G16280	Cucumber (Gy14) v1	cgycpiB536
CSPI03G16280	Cucurbita maxima (Rimu)	cmacpiB286
CSPI03G16280	Cucurbita maxima (Rimu)	cmacpiB335
CSPI03G16280	Cucurbita maxima (Rimu)	cmacpiB413
CSPI03G16280	Cucurbita maxima (Rimu)	cmacpiB601
CSPI03G16280	Cucurbita maxima (Rimu)	cmacpiB609
CSPI03G16280	Cucurbita moschata (Rifu)	cmocpiB276
CSPI03G16280	Cucurbita moschata (Rifu)	cmocpiB325
CSPI03G16280	Cucurbita moschata (Rifu)	cmocpiB401
CSPI03G16280	Cucurbita moschata (Rifu)	cmocpiB589
CSPI03G16280	Cucurbita moschata (Rifu)	cmocpiB598
CSPI03G16280	Cucurbita moschata (Rifu)	cmocpiB891
CSPI03G16280	Cucumber (Chinese Long) v2	cpicuB120
CSPI03G16280	Cucumber (Chinese Long) v2	cpicuB138
CSPI03G16280	Cucumber (Chinese Long) v2	cpicuB141
CSPI03G16280	Cucumber (Chinese Long) v2	cpicuB161
CSPI03G16280	Melon (DHL92) v3.5.1	cpimeB163
CSPI03G16280	Melon (DHL92) v3.5.1	cpimeB176
CSPI03G16280	Melon (DHL92) v3.5.1	cpimeB230
CSPI03G16280	Watermelon (Charleston Gray)	cpiwcgB210
CSPI03G16280	Watermelon (Charleston Gray)	cpiwcgB226
CSPI03G16280	Watermelon (97103) v1	cpiwmB231
CSPI03G16280	Watermelon (97103) v1	cpiwmB261
CSPI03G16280	Cucurbita pepo (Zucchini)	cpecpiB034
CSPI03G16280	Cucurbita pepo (Zucchini)	cpecpiB171
CSPI03G16280	Cucurbita pepo (Zucchini)	cpecpiB217
CSPI03G16280	Cucurbita pepo (Zucchini)	cpecpiB721
CSPI03G16280	Cucurbita pepo (Zucchini)	cpecpiB725