CSPI03G14530 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAAATAAAAGTAAGAACAATGAATGTGTTGCAACTTGGGGTTAGTTCTTGGGTATATATTGGCATTATAGGAGTGTGAGTTTACAAAAGCAGATTAGAAGAGGAAAGGAAAAGAAAGAAAAAGAAAAGAAGAATGGGTTTGAAATCAAATTTGTTAGTACTGGTGATGGTTATTGGAGGTTTGGGATCAGCTCCATTAATGGCGGAAGCTCAGATTGGGAATGTTAGGGGTCTCCCTCCACTTATGAGAGTCCAAGGAACTGTTTATTGCACTGCCGATGGCAACATTGGCCTGATCAATGGCTCCATCCCTTTTTTCACGGGTATGACATTTTTTTTAATCATTTTCTTCTCTCATAACTCTTCCGTTTTTTTGTTGGTTGGATAAACAAATTATTATAACGATTTTAAATCTGACTTTAAGCTAAAAAATTGTATTTAAAATTGCAACAAGTATTGATTATAATTTTTTATTTTCATGTTAATTATATTCCTGAAATAATTTTGTATGTTATAAATTAAATTAAGATTGCTTCTTCCTAGATTTTAAGTTAAATATAGATGATCCAACAGATTAATAAGAATATGTAACAACAAATTTTAAAATAATTATATTAATGATTGTTTTAGGAAGATTCTATTTTATATATATATAAAATAGATTAAAATATGATTTTTTTGGCAGACGCAAGAGTTGAGATATTGGGGTTCTTATTTGGACGTGCCTTACCACCTTCAGTAACAGATAACTTCGGATCCTTTTCGATGTATTTTCGATCGACCTCTTTATCCTCAGTGTTAACCGATAGTACCATCATGGTGAGCACTCCATTGTCCAATTGTAATTCGACGCTTCCATCCACTGGATTTCTATCGTCCACACTAGAATACAATGGAACAGTTGTGGAGGATGGCAACCCCATCATGACACTAGTTTCCAAACGATTCACGTTCAATCCATCTCCTTAAAATGCAAGTTGTGGGTTAAATATATTAACCAAAAGGGGAAAAAAATAACAAGAGAGTATAGTACTTATTTGAGTTTTTAGCACTTGTAATGCATGAGTTCTCTCTCAACCTTGAGTGAGTACTTATGTTGTTTGTTGTCGTGTTTATGCATGTTTGTTTTCGTTCATTCCAAAATAAAAGGTCGTGTGTTTGTTGTTCACATAAAGTTAATATAAAACTATTATAATTTAAAAGATACATATACATATGTATACTTTGTTTGAGTGTGA ATGGGTTTGAAATCAAATTTGTTAGTACTGGTGATGGTTATTGGAGGTTTGGGATCAGCTCCATTAATGGCGGAAGCTCAGATTGGGAATGTTAGGGGTCTCCCTCCACTTATGAGAGTCCAAGGAACTGTTTATTGCACTGCCGATGGCAACATTGGCCTGATCAATGGCTCCATCCCTTTTTTCACGGACGCAAGAGTTGAGATATTGGGGTTCTTATTTGGACGTGCCTTACCACCTTCAGTAACAGATAACTTCGGATCCTTTTCGATGTATTTTCGATCGACCTCTTTATCCTCAGTGTTAACCGATAGTACCATCATGGTGAGCACTCCATTGTCCAATTGTAATTCGACGCTTCCATCCACTGGATTTCTATCGTCCACACTAGAATACAATGGAACAGTTGTGGAGGATGGCAACCCCATCATGACACTAGTTTCCAAACGATTCACGTTCAATCCATCTCCTTAA ATGGGTTTGAAATCAAATTTGTTAGTACTGGTGATGGTTATTGGAGGTTTGGGATCAGCTCCATTAATGGCGGAAGCTCAGATTGGGAATGTTAGGGGTCTCCCTCCACTTATGAGAGTCCAAGGAACTGTTTATTGCACTGCCGATGGCAACATTGGCCTGATCAATGGCTCCATCCCTTTTTTCACGGACGCAAGAGTTGAGATATTGGGGTTCTTATTTGGACGTGCCTTACCACCTTCAGTAACAGATAACTTCGGATCCTTTTCGATGTATTTTCGATCGACCTCTTTATCCTCAGTGTTAACCGATAGTACCATCATGGTGAGCACTCCATTGTCCAATTGTAATTCGACGCTTCCATCCACTGGATTTCTATCGTCCACACTAGAATACAATGGAACAGTTGTGGAGGATGGCAACCCCATCATGACACTAGTTTCCAAACGATTCACGTTCAATCCATCTCCTTAA
BLAST of CSPI03G14530 vs. TrEMBL
Match: A0A0A0L921_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G159420 PE=4 SV=1) HSP 1 Score: 273.1 bits (697), Expect = 2.1e-70 Identity = 144/159 (90.57%), Postives = 150/159 (94.34%), Query Frame = 1
BLAST of CSPI03G14530 vs. TrEMBL
Match: A0A0A0L595_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G154410 PE=4 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 5.7e-31 Identity = 84/160 (52.50%), Postives = 109/160 (68.12%), Query Frame = 1
BLAST of CSPI03G14530 vs. TrEMBL
Match: B9RT72_RICCO (Phylloplanin, putative OS=Ricinus communis GN=RCOM_0681470 PE=4 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 3.4e-15 Identity = 59/155 (38.06%), Postives = 90/155 (58.06%), Query Frame = 1
BLAST of CSPI03G14530 vs. TrEMBL
Match: A0A0D2VP33_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G191400 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 2.2e-14 Identity = 59/156 (37.82%), Postives = 89/156 (57.05%), Query Frame = 1
BLAST of CSPI03G14530 vs. TrEMBL
Match: W9REW7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023503 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 2.2e-14 Identity = 61/153 (39.87%), Postives = 88/153 (57.52%), Query Frame = 1
BLAST of CSPI03G14530 vs. TAIR10
Match: AT3G16660.1 (AT3G16660.1 Pollen Ole e 1 allergen and extensin family protein) HSP 1 Score: 55.5 bits (132), Expect = 3.6e-08 Identity = 46/141 (32.62%), Postives = 73/141 (51.77%), Query Frame = 1
BLAST of CSPI03G14530 vs. TAIR10
Match: AT3G16670.1 (AT3G16670.1 Pollen Ole e 1 allergen and extensin family protein) HSP 1 Score: 50.8 bits (120), Expect = 8.8e-07 Identity = 42/118 (35.59%), Postives = 65/118 (55.08%), Query Frame = 1
BLAST of CSPI03G14530 vs. NCBI nr
Match: gi|449432862|ref|XP_004134217.1| (PREDICTED: phylloplanin-like [Cucumis sativus]) HSP 1 Score: 273.1 bits (697), Expect = 3.1e-70 Identity = 144/159 (90.57%), Postives = 150/159 (94.34%), Query Frame = 1
BLAST of CSPI03G14530 vs. NCBI nr
Match: gi|778678925|ref|XP_004134491.2| (PREDICTED: phylloplanin-like [Cucumis sativus]) HSP 1 Score: 142.1 bits (357), Expect = 8.2e-31 Identity = 84/160 (52.50%), Postives = 109/160 (68.12%), Query Frame = 1
BLAST of CSPI03G14530 vs. NCBI nr
Match: gi|659076845|ref|XP_008438895.1| (PREDICTED: phylloplanin-like [Cucumis melo]) HSP 1 Score: 139.8 bits (351), Expect = 4.1e-30 Identity = 86/158 (54.43%), Postives = 108/158 (68.35%), Query Frame = 1
BLAST of CSPI03G14530 vs. NCBI nr
Match: gi|1009163293|ref|XP_015899888.1| (PREDICTED: phylloplanin-like [Ziziphus jujuba]) HSP 1 Score: 92.8 bits (229), Expect = 5.7e-16 Identity = 65/158 (41.14%), Postives = 96/158 (60.76%), Query Frame = 1
BLAST of CSPI03G14530 vs. NCBI nr
Match: gi|255551791|ref|XP_002516941.1| (PREDICTED: phylloplanin [Ricinus communis]) HSP 1 Score: 89.7 bits (221), Expect = 4.8e-15 Identity = 59/155 (38.06%), Postives = 90/155 (58.06%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |