CSPI03G14430 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G14430
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionIsoleucine--tRNA ligase
LocationChr3 : 10798220 .. 10799007 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTATGGGCAGATTGAAACAATCCATCGTTTAACTCTCAGTCCAGAGTATGAAGCTGTCCAGGTAACTATTGCTTGCATTCTCATGTTCTACTTTCTATGTGGTTCCCTTAAGCAGTTTGTTGCAAATTTCAATTCAACAGTTTTGTGTTTGTATTTTTTGTATGTTAGATTGAGGTGTTTGGTCAAATGGCCATCCAAGGTTATATATTTAGAGGGAGAAAGCCAGTTCACTGGAGTCCCTCATCACGAACTGCTCTTGCAGAGGCTGAATTGGAGGTAAATCATTTGTTGAAGCATGAGAACACAATCAAATTAGATAAACTTATTACAGATATTCTCTGGTGTAAAGAGAAAATCATTTAGGGTTTTTTTTTTAAAGAATAAAAAAATCTAGCATGGTTTTTCTATGAAACCTATTGCTTTCAAAACATTAAATCACACGGATAATCATTTTCCATGATGAATTTTGTACTCTAATCTATTTTTCATGCTGATTCCTGTCATTTGCTTAAATTTGGTTATATCATTTTTTTCCTGCCCTACCTGTTTGATAATTGCATTCAGTACCCTGAGGGGCATACTTCAAGAAGCATATACGCCATTTTTAGATTGGTTAAGGAAGGTCCATCTTCAGGCGGTGTGCTACAAGATTTTTTCCGAGACTTGTGCTTGGCCATATGGACTACAACTCCTTGGACTATTCCAGCCAATGCTGGTGAGCTTTTGTTCTATTACAATGGGAGCAATATGGTTGTAGATTTATTTCCGTATGTTTCCAAGTAA

mRNA sequence

ATGGAGTATGGGCAGATTGAAACAATCCATCGTTTAACTCTCAGTCCAGAGTATGAAGCTGTCCAGATTGAGGTGTTTGGTCAAATGGCCATCCAAGGTTATATATTTAGAGGGAGAAAGCCAGTTCACTGGAGTCCCTCATCACGAACTGCTCTTGCAGAGGCTGAATTGGAGTACCCTGAGGGGCATACTTCAAGAAGCATATACGCCATTTTTAGATTGGTTAAGGAAGGTCCATCTTCAGGCGGTGTGCTACAAGATTTTTTCCGAGACTTGTGCTTGGCCATATGGACTACAACTCCTTGGACTATTCCAGCCAATGCTGGTGAGCTTTTGTTCTATTACAATGGGAGCAATATGGTTGTAGATTTATTTCCGTATGTTTCCAAGTAA

Coding sequence (CDS)

ATGGAGTATGGGCAGATTGAAACAATCCATCGTTTAACTCTCAGTCCAGAGTATGAAGCTGTCCAGATTGAGGTGTTTGGTCAAATGGCCATCCAAGGTTATATATTTAGAGGGAGAAAGCCAGTTCACTGGAGTCCCTCATCACGAACTGCTCTTGCAGAGGCTGAATTGGAGTACCCTGAGGGGCATACTTCAAGAAGCATATACGCCATTTTTAGATTGGTTAAGGAAGGTCCATCTTCAGGCGGTGTGCTACAAGATTTTTTCCGAGACTTGTGCTTGGCCATATGGACTACAACTCCTTGGACTATTCCAGCCAATGCTGGTGAGCTTTTGTTCTATTACAATGGGAGCAATATGGTTGTAGATTTATTTCCGTATGTTTCCAAGTAA
Homology
[Close]
BLAST of CSPI03G14430 vs. Swiss-Prot
Match: SYIM_ARATH (Isoleucine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=OVA2 PE=2 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 3.7e-37
Identity = 72/97 (74.23%), Postives = 84/97 (86.60%), Query Frame = 1 

Query: 12  LTLSPEYEAVQIEVFGQMAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAI 71
           LTL PEYEA QIEVFGQMA++GYI+RGRKPVHWSPSSRTALAEAELEYPEGH S+SIYAI
Sbjct: 253 LTLDPEYEAAQIEVFGQMALKGYIYRGRKPVHWSPSSRTALAEAELEYPEGHISKSIYAI 312

Query: 72  FRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPANA 109
           F+LV  G +   +L +F  ++ LA+WTTTPWT+PANA
Sbjct: 313 FKLV--GGAKTSLLDEFIPNIYLAVWTTTPWTMPANA 347

[Close]
BLAST of CSPI03G14430 vs. Swiss-Prot
Match: SYI_CYAP7 (Isoleucine--tRNA ligase OS=Cyanothece sp. (strain PCC 7424) GN=ileS PE=3 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.0e-35
Identity = 66/96 (68.75%), Postives = 81/96 (84.38%), Query Frame = 1 

Query: 12  LTLSPEYEAVQIEVFGQMAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAI 71
           LTL+P+YEA QI VFGQMA++GYI+RG KPVHWSPSS+TALAEAELEYPEGHTSRS+YA+
Sbjct: 158 LTLTPDYEAAQIGVFGQMALKGYIYRGLKPVHWSPSSQTALAEAELEYPEGHTSRSVYAV 217

Query: 72  FRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPAN 108
           F + K   ++  VL  + +DL +AIWTTTPWT+P N
Sbjct: 218 FPITKASDTAKKVLTPYLKDLGVAIWTTTPWTLPGN 253

[Close]
BLAST of CSPI03G14430 vs. Swiss-Prot
Match: SYI_CYAA5 (Isoleucine--tRNA ligase OS=Cyanothece sp. (strain ATCC 51142) GN=ileS PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.0e-34
Identity = 66/96 (68.75%), Postives = 79/96 (82.29%), Query Frame = 1 

Query: 12  LTLSPEYEAVQIEVFGQMAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAI 71
           LTL+PEYEA QI VFG+MA++GYI+RG KPVHWSPSS+TALAEAELEYPEGHTSRSI+A 
Sbjct: 158 LTLTPEYEAAQIGVFGEMALKGYIYRGLKPVHWSPSSQTALAEAELEYPEGHTSRSIFAA 217

Query: 72  FRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPAN 108
           F ++K    +  +LQ F   L +AIWTTTPWT+P N
Sbjct: 218 FPIIKASKDTEEILQPFLNKLGVAIWTTTPWTLPGN 253

[Close]
BLAST of CSPI03G14430 vs. Swiss-Prot
Match: SYI_CYAP8 (Isoleucine--tRNA ligase OS=Cyanothece sp. (strain PCC 8801) GN=ileS PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.0e-34
Identity = 66/96 (68.75%), Postives = 79/96 (82.29%), Query Frame = 1 

Query: 12  LTLSPEYEAVQIEVFGQMAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAI 71
           LTL+PEYEA QI VFGQMA++GYI+RG KPVHWSPSSRTALAEAELEYPEGHTS+SI+A 
Sbjct: 158 LTLTPEYEAAQIGVFGQMALKGYIYRGLKPVHWSPSSRTALAEAELEYPEGHTSQSIFAA 217

Query: 72  FRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPAN 108
           F ++K    +  +L  F  +L +AIWTTTPWT+P N
Sbjct: 218 FPIIKSSKDAQEILDPFLSNLGVAIWTTTPWTLPGN 253

[Close]
BLAST of CSPI03G14430 vs. Swiss-Prot
Match: SYI_SYNY3 (Isoleucine--tRNA ligase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=ileS PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.0e-34
Identity = 66/96 (68.75%), Postives = 77/96 (80.21%), Query Frame = 1 

Query: 12  LTLSPEYEAVQIEVFGQMAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAI 71
           LTL+PEYEA QI VFG MA++GYI+RG KPVHWSPSSRTALAEAELEYPEGHTSRSIY  
Sbjct: 158 LTLTPEYEAAQIGVFGAMALKGYIYRGLKPVHWSPSSRTALAEAELEYPEGHTSRSIYVS 217

Query: 72  FRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPAN 108
           F + + G  +  +L  +  DL +AIWTTTPWT+P N
Sbjct: 218 FPITQAGEKAAEILAPYIDDLAVAIWTTTPWTLPGN 253

[Close]
BLAST of CSPI03G14430 vs. TrEMBL
Match: B9HXV6_POPTR (tRNA synthetase class I family protein OS=Populus trichocarpa GN=POPTR_0010s01830g PE=3 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.0e-41
Identity = 80/97 (82.47%), Postives = 88/97 (90.72%), Query Frame = 1 

Query: 12  LTLSPEYEAVQIEVFGQMAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAI 71
           LTL PEYEA QIEVFGQMA QGYI+RGRKPVHWSPSSRTALAEAELEYPEGH S+SIYAI
Sbjct: 142 LTLDPEYEAAQIEVFGQMAFQGYIYRGRKPVHWSPSSRTALAEAELEYPEGHVSKSIYAI 201

Query: 72  FRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPANA 109
           FR+V   P+S G+L++FF DLCLAIWTTTPWT+PANA
Sbjct: 202 FRVVSAPPTSDGLLEEFFPDLCLAIWTTTPWTVPANA 238

[Close]
BLAST of CSPI03G14430 vs. TrEMBL
Match: M5XXX4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000564mg PE=3 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 3.0e-41
Identity = 79/97 (81.44%), Postives = 88/97 (90.72%), Query Frame = 1 

Query: 12  LTLSPEYEAVQIEVFGQMAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAI 71
           LTL PEYEA QIEVFGQM IQG+I+RGRKPVHWSPSSRTALAEAELEYPEGH SRSIYAI
Sbjct: 258 LTLDPEYEAAQIEVFGQMVIQGFIYRGRKPVHWSPSSRTALAEAELEYPEGHVSRSIYAI 317

Query: 72  FRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPANA 109
           F+LV   P+SGG+L ++F ++CLAIWTTTPWTIPANA
Sbjct: 318 FKLVSASPTSGGLLNEYFPNVCLAIWTTTPWTIPANA 354

[Close]
BLAST of CSPI03G14430 vs. TrEMBL
Match: W9RHD2_9ROSA (Isoleucine--tRNA ligase OS=Morus notabilis GN=L484_023524 PE=3 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 5.0e-41
Identity = 81/97 (83.51%), Postives = 86/97 (88.66%), Query Frame = 1 

Query: 12  LTLSPEYEAVQIEVFGQMAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAI 71
           LTL PEYEA QIEVFGQMAIQGYI+RGRKPVHWSPSSRTALAEAELEYPEGH SRSIYAI
Sbjct: 205 LTLDPEYEAAQIEVFGQMAIQGYIYRGRKPVHWSPSSRTALAEAELEYPEGHVSRSIYAI 264

Query: 72  FRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPANA 109
           FRLV   P  GG+L ++  +LCLAIWTTTPWTIPANA
Sbjct: 265 FRLVTAPPVLGGILNEYLPNLCLAIWTTTPWTIPANA 301

[Close]
BLAST of CSPI03G14430 vs. TrEMBL
Match: A0A067JV14_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18876 PE=3 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 2.5e-40
Identity = 78/97 (80.41%), Postives = 86/97 (88.66%), Query Frame = 1 

Query: 12  LTLSPEYEAVQIEVFGQMAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAI 71
           LTL PEYEA QIEVFGQMA++GYI+RGRKPVHWSP SRTALAEAELEYPEGH SRSIYAI
Sbjct: 242 LTLDPEYEAAQIEVFGQMALKGYIYRGRKPVHWSPKSRTALAEAELEYPEGHVSRSIYAI 301

Query: 72  FRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPANA 109
           FRLV   P+S  +L++FF DLCLA WTTTPWT+PANA
Sbjct: 302 FRLVSAPPTSNRLLEEFFPDLCLATWTTTPWTVPANA 338

[Close]
BLAST of CSPI03G14430 vs. TrEMBL
Match: A5ALP9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015862 PE=3 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 2.5e-40
Identity = 81/97 (83.51%), Postives = 86/97 (88.66%), Query Frame = 1 

Query: 12  LTLSPEYEAVQIEVFGQMAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAI 71
           LTL PEYEA QIEVFGQMA+QGYI+RGRKPVHWSPSSRTALAEAELEYPEGH S+SIYAI
Sbjct: 218 LTLDPEYEASQIEVFGQMALQGYIYRGRKPVHWSPSSRTALAEAELEYPEGHISKSIYAI 277

Query: 72  FRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPANA 109
           FRLV    +SG  L+DF  DLCLAIWTTTPWTIPANA
Sbjct: 278 FRLVSAPVTSGTSLEDFLPDLCLAIWTTTPWTIPANA 314

[Close]
BLAST of CSPI03G14430 vs. TAIR10
Match: AT5G49030.1 (AT5G49030.1 tRNA synthetase class I (I, L, M and V) family protein)

HSP 1 Score: 155.6 bits (392), Expect = 2.1e-38
Identity = 72/97 (74.23%), Postives = 84/97 (86.60%), Query Frame = 1 

Query: 12  LTLSPEYEAVQIEVFGQMAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAI 71
           LTL PEYEA QIEVFGQMA++GYI+RGRKPVHWSPSSRTALAEAELEYPEGH S+SIYAI
Sbjct: 253 LTLDPEYEAAQIEVFGQMALKGYIYRGRKPVHWSPSSRTALAEAELEYPEGHISKSIYAI 312

Query: 72  FRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPANA 109
           F+LV  G +   +L +F  ++ LA+WTTTPWT+PANA
Sbjct: 313 FKLV--GGAKTSLLDEFIPNIYLAVWTTTPWTMPANA 347

[Close]
BLAST of CSPI03G14430 vs. NCBI nr
Match: gi|778678894|ref|XP_011651056.1| (PREDICTED: LOW QUALITY PROTEIN: probable isoleucine--tRNA ligase, mitochondrial [Cucumis sativus])

HSP 1 Score: 197.6 bits (501), Expect = 1.4e-47
Identity = 93/97 (95.88%), Postives = 94/97 (96.91%), Query Frame = 1 

Query: 12  LTLSPEYEAVQIEVFGQMAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAI 71
           LTLSPEYEA QIEVFGQMAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAI
Sbjct: 259 LTLSPEYEAAQIEVFGQMAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAI 318

Query: 72  FRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPANA 109
           FRLVKEGPSSGGVLQ+F  DLCLAIWTTTPWTIPANA
Sbjct: 319 FRLVKEGPSSGGVLQEFLPDLCLAIWTTTPWTIPANA 355

[Close]
BLAST of CSPI03G14430 vs. NCBI nr
Match: gi|659076823|ref|XP_008438885.1| (PREDICTED: isoleucine--tRNA ligase, mitochondrial [Cucumis melo])

HSP 1 Score: 197.6 bits (501), Expect = 1.4e-47
Identity = 93/97 (95.88%), Postives = 94/97 (96.91%), Query Frame = 1 

Query: 12  LTLSPEYEAVQIEVFGQMAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAI 71
           LTLSPEYEA QIEVFGQMAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAI
Sbjct: 259 LTLSPEYEAAQIEVFGQMAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAI 318

Query: 72  FRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPANA 109
           FRLVKEGPSSGGVLQ+F  DLCLAIWTTTPWTIPANA
Sbjct: 319 FRLVKEGPSSGGVLQEFLPDLCLAIWTTTPWTIPANA 355

[Close]
BLAST of CSPI03G14430 vs. NCBI nr
Match: gi|1009163545|ref|XP_015900025.1| (PREDICTED: isoleucine--tRNA ligase, chloroplastic/mitochondrial-like [Ziziphus jujuba])

HSP 1 Score: 178.7 bits (452), Expect = 6.5e-42
Identity = 80/97 (82.47%), Postives = 89/97 (91.75%), Query Frame = 1 

Query: 12  LTLSPEYEAVQIEVFGQMAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAI 71
           LTL PEYEA QIEVFGQMAIQGYI+RGRKPVHWSPSS+TALAEAELEYPEGH SRS+YAI
Sbjct: 259 LTLDPEYEAAQIEVFGQMAIQGYIYRGRKPVHWSPSSQTALAEAELEYPEGHVSRSLYAI 318

Query: 72  FRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPANA 109
           F+LV   P+SGG+L ++F DLCLAIWTTTPWT+PANA
Sbjct: 319 FKLVSAPPTSGGLLDEYFPDLCLAIWTTTPWTVPANA 355

[Close]
BLAST of CSPI03G14430 vs. NCBI nr
Match: gi|1009163329|ref|XP_015899908.1| (PREDICTED: isoleucine--tRNA ligase, chloroplastic/mitochondrial [Ziziphus jujuba])

HSP 1 Score: 178.7 bits (452), Expect = 6.5e-42
Identity = 80/97 (82.47%), Postives = 89/97 (91.75%), Query Frame = 1 

Query: 12  LTLSPEYEAVQIEVFGQMAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAI 71
           LTL PEYEA QIEVFGQMAIQGYI+RGRKPVHWSPSS+TALAEAELEYPEGH SRS+YAI
Sbjct: 259 LTLDPEYEAAQIEVFGQMAIQGYIYRGRKPVHWSPSSQTALAEAELEYPEGHVSRSLYAI 318

Query: 72  FRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPANA 109
           F+LV   P+SGG+L ++F DLCLAIWTTTPWT+PANA
Sbjct: 319 FKLVSAPPTSGGLLDEYFPDLCLAIWTTTPWTVPANA 355

[Close]
BLAST of CSPI03G14430 vs. NCBI nr
Match: gi|224107153|ref|XP_002314391.1| (tRNA synthetase class I family protein [Populus trichocarpa])

HSP 1 Score: 177.6 bits (449), Expect = 1.5e-41
Identity = 80/97 (82.47%), Postives = 88/97 (90.72%), Query Frame = 1 

Query: 12  LTLSPEYEAVQIEVFGQMAIQGYIFRGRKPVHWSPSSRTALAEAELEYPEGHTSRSIYAI 71
           LTL PEYEA QIEVFGQMA QGYI+RGRKPVHWSPSSRTALAEAELEYPEGH S+SIYAI
Sbjct: 142 LTLDPEYEAAQIEVFGQMAFQGYIYRGRKPVHWSPSSRTALAEAELEYPEGHVSKSIYAI 201

Query: 72  FRLVKEGPSSGGVLQDFFRDLCLAIWTTTPWTIPANA 109
           FR+V   P+S G+L++FF DLCLAIWTTTPWT+PANA
Sbjct: 202 FRVVSAPPTSDGLLEEFFPDLCLAIWTTTPWTVPANA 238

The following BLAST results are available for this feature:
BLAST of CSPI03G14430 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SYIM_ARATH3.7e-3774.23Isoleucine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=... [more]
SYI_CYAP72.0e-3568.75Isoleucine--tRNA ligase OS=Cyanothece sp. (strain PCC 7424) GN=ileS PE=3 SV=1[more]
SYI_CYAA51.0e-3468.75Isoleucine--tRNA ligase OS=Cyanothece sp. (strain ATCC 51142) GN=ileS PE=3 SV=1[more]
SYI_CYAP81.0e-3468.75Isoleucine--tRNA ligase OS=Cyanothece sp. (strain PCC 8801) GN=ileS PE=3 SV=1[more]
SYI_SYNY31.0e-3468.75Isoleucine--tRNA ligase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=ileS ... [more]
BLAST of CSPI03G14430 vs. TrEMBL
Match NameE-valueIdentityDescription
B9HXV6_POPTR1.0e-4182.47tRNA synthetase class I family protein OS=Populus trichocarpa GN=POPTR_0010s0183... [more]
M5XXX4_PRUPE3.0e-4181.44Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000564mg PE=3 SV=1[more]
W9RHD2_9ROSA5.0e-4183.51Isoleucine--tRNA ligase OS=Morus notabilis GN=L484_023524 PE=3 SV=1[more]
A0A067JV14_JATCU2.5e-4080.41Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18876 PE=3 SV=1[more]
A5ALP9_VITVI2.5e-4083.51Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015862 PE=3 SV=1[more]
BLAST of CSPI03G14430 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G49030.12.1e-3874.23 tRNA synthetase class I (I, L, M and V) family protein[more]
BLAST of CSPI03G14430 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778678894|ref|XP_011651056.1|1.4e-4795.88PREDICTED: LOW QUALITY PROTEIN: probable isoleucine--tRNA ligase, mitochondrial ... [more]
gi|659076823|ref|XP_008438885.1|1.4e-4795.88PREDICTED: isoleucine--tRNA ligase, mitochondrial [Cucumis melo][more]
gi|1009163545|ref|XP_015900025.1|6.5e-4282.47PREDICTED: isoleucine--tRNA ligase, chloroplastic/mitochondrial-like [Ziziphus j... [more]
gi|1009163329|ref|XP_015899908.1|6.5e-4282.47PREDICTED: isoleucine--tRNA ligase, chloroplastic/mitochondrial [Ziziphus jujuba... [more]
gi|224107153|ref|XP_002314391.1|1.5e-4182.47tRNA synthetase class I family protein [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002300aa-tRNA-synth_Ia
IPR009008Val/Leu/Ile-tRNA-synth_edit
IPR014729Rossmann-like_a/b/a_fold
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0004812aminoacyl-tRNA ligase activity
GO:0005524ATP binding
GO:0002161aminoacyl-tRNA editing activity
Vocabulary: Biological Process
TermDefinition
GO:0006418tRNA aminoacylation for protein translation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009097 isoleucine biosynthetic process
biological_process GO:0006428 isoleucyl-tRNA aminoacylation
biological_process GO:0009098 leucine biosynthetic process
biological_process GO:0048481 plant ovule development
biological_process GO:0006450 regulation of translational fidelity
biological_process GO:0009099 valine biosynthetic process
biological_process GO:0006418 tRNA aminoacylation for protein translation
cellular_component GO:0009570 chloroplast stroma
molecular_function GO:0002161 aminoacyl-tRNA editing activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0004822 isoleucine-tRNA ligase activity
molecular_function GO:0004812 aminoacyl-tRNA ligase activity
molecular_function GO:0000166 nucleotide binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G14430.1CSPI03G14430.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002300Aminoacyl-tRNA synthetase, class IaPFAMPF00133tRNA-synt_1coord: 11..108
score: 2.9
IPR009008Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domainGENE3DG3DSA:3.90.740.10coord: 54..107
score: 1.7
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3DG3DSA:3.40.50.620coord: 11..53
score: 9.7
NoneNo IPR availablePANTHERPTHR11946ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASEScoord: 12..108
score: 6.3
NoneNo IPR availablePANTHERPTHR11946:SF82ISOLEUCINE--TRNA LIGASE, MITOCHONDRIALcoord: 12..108
score: 6.3
NoneNo IPR availableunknownSSF52374Nucleotidylyl transferasecoord: 11..108
score: 2.11

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI03G14430Wild cucumber (PI 183967)cpicpiB021
CSPI03G14430Cucumber (Gy14) v1cgycpiB383
CSPI03G14430Cucurbita maxima (Rimu)cmacpiB008
CSPI03G14430Cucurbita maxima (Rimu)cmacpiB255
CSPI03G14430Cucurbita maxima (Rimu)cmacpiB359
CSPI03G14430Cucurbita maxima (Rimu)cmacpiB367
CSPI03G14430Cucurbita maxima (Rimu)cmacpiB826
CSPI03G14430Cucurbita maxima (Rimu)cmacpiB903
CSPI03G14430Cucurbita moschata (Rifu)cmocpiB243
CSPI03G14430Cucurbita moschata (Rifu)cmocpiB352
CSPI03G14430Cucurbita moschata (Rifu)cmocpiB814
CSPI03G14430Cucurbita moschata (Rifu)cmocpiB883
CSPI03G14430Cucumber (Chinese Long) v2cpicuB107
CSPI03G14430Cucumber (Chinese Long) v2cpicuB120
CSPI03G14430Melon (DHL92) v3.5.1cpimeB174
CSPI03G14430Melon (DHL92) v3.5.1cpimeB230
CSPI03G14430Watermelon (Charleston Gray)cpiwcgB226
CSPI03G14430Watermelon (Charleston Gray)cpiwcgB255
CSPI03G14430Watermelon (97103) v1cpiwmB231
CSPI03G14430Watermelon (97103) v1cpiwmB281
CSPI03G14430Cucurbita pepo (Zucchini)cpecpiB133
CSPI03G14430Cucurbita pepo (Zucchini)cpecpiB140
CSPI03G14430Cucurbita pepo (Zucchini)cpecpiB307
CSPI03G14430Cucurbita pepo (Zucchini)cpecpiB611
CSPI03G14430Cucurbita pepo (Zucchini)cpecpiB861
CSPI03G14430Bottle gourd (USVL1VR-Ls)cpilsiB149
CSPI03G14430Bottle gourd (USVL1VR-Ls)cpilsiB198
CSPI03G14430Melon (DHL92) v3.6.1cpimedB165
CSPI03G14430Melon (DHL92) v3.6.1cpimedB185
CSPI03G14430Melon (DHL92) v3.6.1cpimedB224
CSPI03G14430Cucumber (Gy14) v2cgybcpiB024
CSPI03G14430Cucumber (Gy14) v2cgybcpiB110
CSPI03G14430Silver-seed gourdcarcpiB0075
CSPI03G14430Silver-seed gourdcarcpiB0639
CSPI03G14430Silver-seed gourdcarcpiB0738
CSPI03G14430Silver-seed gourdcarcpiB0874
CSPI03G14430Cucumber (Chinese Long) v3cpicucB132
CSPI03G14430Cucumber (Chinese Long) v3cpicucB144
CSPI03G14430Watermelon (97103) v2cpiwmbB209
CSPI03G14430Watermelon (97103) v2cpiwmbB239
CSPI03G14430Wax gourdcpiwgoB259
CSPI03G14430Wax gourdcpiwgoB269