CSPI03G13090 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCATTGCCTATGTTTATGTTCATTGGGGGAGAAAATGTATTGCCTATGCTTATAGGTTCGTTGGTTTGTCTACCATTTTAGATGTCGGGGAATCCCGCGAAGACAGAAGTTCTTGAGGATACAAATGGCTGTTCATCCGGGGTGAATAAAAATGAGCTGATTCTTAGACCAGTTTCTCAAGATGAATCTGGGGAGGGCTTGCCATATGCTCCTGAAAATTGGCCCAATCCTGGTGATAACTGGAGTTGGAGGGTGGGGAAGAGAGTTGCTATAACTGGCCATTTTCTGGATAGGTACCTTTATTCTCCTCGTGGTATTAGCGCGTCCGAAAACTCAGCTCGTAAAGGGCAAAGTTTTGCAAGCAAGCTTTCAGTTGAAAGATATATCCAGTCTGAGTTCCCTAATGCAGACGTTGAGGCTTTTTTTGCTTCATTCAGTTGGAAGATACCAGCAAAAAAGTCATCTTCAGCCCAAGGTTAGCTTAATATATTCGATCAGTCTCTTCTCATCTCATACCAGAGAGTCTGTTTGGCAGTGAATTCAGATTATGTTTTATATTTTCAGATTCACAGAGTTCAACAGATATACACTTGACGGACAATCCAAATTCTGTTTCTGAAAACTGTTTTCGGATTTTGTGATCCAAAGAGTGTAAATTCTGAAAACAACTTTTTTATGTTTTCATTGTATCTAGAATTTGAATTTTACATTTTGACAAGATATTAAATACATAAAAATATTTAGAAATACAATATGTAAGGTTATAAACTCAATTCATTTTTTCAATATAATATGTACTATGTAATGTATTATAAATTATATAATAATGCAAAATAATAATTATATAAATTTTTAGGTTACATTACAAATTTGGTCCATGTAGTTTTAAAAGGATAGAATTTAGTCTCTATGGTTTATAACTAGAATTTAGTCCTTTTAATTTACTAAAATCACATAAAATAGTCTTGTTTGTAGGGATTATCTATGAATGTTGTCAAATGATAAGGACTATATATGGAGTTTTATCGAACTCTAGGCTAAACTTTAACCTTCTCTCAACAATAGGGACTAAAATTGCAATTTAACCAATTTGTAACCCTAAATTATATTCATAAATAAATTAATAATAGTTTATTGTCAACTAATCTTAGTGGATAAGTAAGACTAGATTTATGATTTATGAATATATAGTATGAAACACATTTAAACATTTTTTAAAATCTTAATCCAATTTTTGAATCTGTCACCAAACACATCATAAAATATTTTCATTGAATCCATAATTTTCAAATTTTGGTTTGAAGATTCTGTACCAAACAGGCCCTTAGCTCTTGTAGCTTCACTAACTTTATTATTTATCTCAGTTATAGCATTCTCGTCTAGCCTCTTGTATCTGAAATGACTTCTGTTGGTTGAAGTAAAATGCCTATTTTAGGTGAAATATTTCTATTGTTGTAATTGGTTGTCTTAAATGACAAGTATCTGATGATTATGTAATATTGAATTTATGTTGCATTATATTTAAGTTTATTGTTACAGGTAGTCTATACATGATAAACTCCCACATACAAGATAAATACTTTGGATAGGATCAGCACCTAGTATTTTCGTTCCAGTTTAGTTCCCATGTCTCTGATTTTATTGTCTTTCCCTTCTTTGCTTATCAGAACTTACGCCTTATTCGTTGGCCTTTTCATTTTTGTTGGGCCAATGGCTAACAAGGTTTACAGGTTAGAACTCTGAAATTTTGGAAGTTTAGATGAAACCAAGTGACTGGACCTCAAAGGGGACTCACTGAAGTTCTACTGTCATGTTGTCAAAAGCATCGCTGTATATAATAATTTCTTTATCATTTAATATAAAGTCAGCATGTGTGTATGTGCATGTTAGGTCACATCGTATTTTTATTGATTGGGTAACCTTTTTTATTGCTGTCATAGTAATCATTCTACTATTTTTAGAGATCCTTAATTTACAGTTGATCTTATTTAGGTACTCGGGTAAAACACATTCCATGCTCTCTACCCTCAAAAAAGATAGAATGCTCCGCATCTGCGTCCCAGAATGATAAAGTTGGTTGCAAGGCTGGAAATAAGAACTGTTATAGTTTATCTGTTTCTGAAAATCCATCTTCATCCAAATCCATGTCTTGTGGTATTTGCTGCAGTGAATCTCGCTTTTGCCGTGATTGCTGCTGTATACTTTGCTGCAAGATTATAGACACGACCGTGGAAAGTTATAGCTACATAAAATGTAAAGAAGTGGTGGGTGATGGATATATTTGTGGACATCTTTCTCATATAAAATGTGGTCTTAAATCGTATACAGCTGGGACAGTTGGAGGAAGCATTGGACTGGATGCTGAGTATTATTGTCGACGTTGTGATGCCAGAACGGATTTGGTATCACATGTAGAAAGATTTTTGCAGTCATGCCAATCAGCTGACTGCCAAGATGATGTTGAGGAGATCTTAAACCTTGGTTTATGTATTTTGCGTGGTTCGCACAAAATGAGAGCAAAGGAGTTGTTAAGACACATTGAACTGAGCATTGAGAAGGTAAAACTGGTATTTTCTACAAATACTAAATATTGCAATATCCTATGCTGCTCTGGGACTTTGCCATACTATTTGACTTTGAATGCTTGCTTCAGATTAAAACTGGGACTTGCTTGGAAAAGATTTGGAAGATGGAGGAAGATAGCTCAGCAAATTGCACTGGTAATTTTTCTTCAAATCCAATAGCATGGATAAGTTCTCACAACCGTATAAGCACGAGAAATTGTAATACCATCCATTAGGGTCTCAGCTAATTGAACTGGTAATTATTTTTTCGTCAAGTCCCATCATTGATAACTATGGAGAAAGATTTCATCATTTGAATATAGGGTCTGATTATTCTACATACTCGAACAAATCTGTCTTAGGAACAATGTCTCTAAGTGGTTAGTTGTATAACCAGCCAAATATTTAGTATGTTCAACAGCCATTTAGACCATCGATTTTTCATACTCCTGCTCGTTAAAAGAATGATAAGTATACTCTCAAAACAAGAAAAAGAGATGATTTTGTATTTTGTGAAAGAAATGATTTTGTATTTTATGCACAGATGCACCTGATACTGCTGATTCTACAGAAAGTTCTCATGAAACTTCAGACTCCCTTATAAGCTCAGAATGGACTATGTCCACCCCTTTTGATCATTGGATCGAGTCCTTAAAACTTGAAGACGAAATTGATCAGGTTTTGCATGGACTGAAAAGATCACAGGAGTTCGAGTATAATTTAGCAGAAGAAAAGCTTCTATTACATAAAAATTATCTACATAACCTCTTTCAGCAACTTGAAAAGGAGCAAACTGAACTCAGACATCAAGCACCATCAACGGGACAAAATGCCGTATCAAACAGAGTGGACCAAATAAAACGAGAAGTAAAGAGACTGAAGAGAATGGAAAAGATTGCTGATGGATTTGGAATGACTCCGAAAGATATCCTCAAGGAGGACTTCCATTTGGATGTTGAAATAGAGATACGGAAGTGAAAAAATACGATGTCTCACAAAATTTCACTGAACTTGCTTGGTTCATTTAGCTCTTATGTGAGTTTTTGTATTTTTTACTGTGTATCATATGGCTTCACACGAGGCTGAGTCTATGATATTGAGGTTTTACTCGGTTTTTTGAGGATATCTGGATTCAGAAAGCAAAGACTGAACCTATACCGTTGTGGAGTTGCCAGAAGGAATGTAGAGTAGAGATATTTTGGTCCATTGGAAACTAACCCTCAGCAACGAGTTTTCACGGTAGGCCTTCATATCAAATTATCAACACCATGGATTTTATACTCTACTGACCAAACTGTGAGCTTACTCCTATTTGTTGTCTTTGTTACTTATATATTGAATGTATTAGCAAGTGAGAGTTAGAAACGAGCATTGTTTGAAGATATATACTTAAATCTTTGCCTCTTCAACTCTCTCAGGAAATGATTATTTATGTTTTGAATTCTTGTGAACATTGGAACTTTTCTCAGCTAAACTTCTACGTTCCCATTGGTTGCTTTCCATGACTTCTGTGGAGCTTAGTGTAGGGGATCCAGTCTGGTTCAGATTTCTTATAACTACATGCAGAAGAGAGGTAACTTCTCTTGATTACATTTTGCTAAAATCAGAACATATTTGAAACGGGAAAAGAAGAAGAAGACATAATCCCACTTATTACATAGAAAGGAAGCTTCGTGGAATGCAGTGAAACCGCCATTTTCTTCATCAGGATGATGATGATGAAGATGATTGTTGCACCTACTGTTGACGTGTGATTGTGTTCACGACAAAAAAGGTCGGCTCCTTTCTTTGTCATCTTGGCTTTTCTATCCTTACGAAT ATGTCGGGGAATCCCGCGAAGACAGAAGTTCTTGAGGATACAAATGGCTGTTCATCCGGGGTGAATAAAAATGAGCTGATTCTTAGACCAGTTTCTCAAGATGAATCTGGGGAGGGCTTGCCATATGCTCCTGAAAATTGGCCCAATCCTGGTGATAACTGGAGTTGGAGGGTGGGGAAGAGAGTTGCTATAACTGGCCATTTTCTGGATAGGTACCTTTATTCTCCTCGTGGTATTAGCGCGTCCGAAAACTCAGCTCGTAAAGGGCAAAGTTTTGCAAGCAAGCTTTCAGTTGAAAGATATATCCAGTCTGAGTTCCCTAATGCAGACGTTGAGGCTTTTTTTGCTTCATTCAGTTGGAAGATACCAGCAAAAAAGTCATCTTCAGCCCAAGGTACTCGGGTAAAACACATTCCATGCTCTCTACCCTCAAAAAAGATAGAATGCTCCGCATCTGCGTCCCAGAATGATAAAGTTGGTTGCAAGGCTGGAAATAAGAACTGTTATAGTTTATCTGTTTCTGAAAATCCATCTTCATCCAAATCCATGTCTTGTGGTATTTGCTGCAGTGAATCTCGCTTTTGCCGTGATTGCTGCTGTATACTTTGCTGCAAGATTATAGACACGACCGTGGAAAGTTATAGCTACATAAAATGTAAAGAAGTGGTGGGTGATGGATATATTTGTGGACATCTTTCTCATATAAAATGTGGTCTTAAATCGTATACAGCTGGGACAGTTGGAGGAAGCATTGGACTGGATGCTGAGTATTATTGTCGACGTTGTGATGCCAGAACGGATTTGGTATCACATGTAGAAAGATTTTTGCAGTCATGCCAATCAGCTGACTGCCAAGATGATGTTGAGGAGATCTTAAACCTTGGTTTATGTATTTTGCGTGGTTCGCACAAAATGAGAGCAAAGGAGTTGTTAAGACACATTGAACTGAGCATTGAGAAGATTAAAACTGGGACTTGCTTGGAAAAGATTTGGAAGATGGAGGAAGATAGCTCAGCAAATTGCACTGATGCACCTGATACTGCTGATTCTACAGAAAGTTCTCATGAAACTTCAGACTCCCTTATAAGCTCAGAATGGACTATGTCCACCCCTTTTGATCATTGGATCGAGTCCTTAAAACTTGAAGACGAAATTGATCAGGTTTTGCATGGACTGAAAAGATCACAGGAGTTCGAGTATAATTTAGCAGAAGAAAAGCTTCTATTACATAAAAATTATCTACATAACCTCTTTCAGCAACTTGAAAAGGAGCAAACTGAACTCAGACATCAAGCACCATCAACGGGACAAAATGCCGTATCAAACAGAGTGGACCAAATAAAACGAGAAGTAAAGAGACTGAAGAGAATGGAAAAGATTGCTGATGGATTTGGAATGACTCCGAAAGATATCCTCAAGGAGGACTTCCATTTGGATGTTGAAATAGAGATACGGAAGTGA ATGTCGGGGAATCCCGCGAAGACAGAAGTTCTTGAGGATACAAATGGCTGTTCATCCGGGGTGAATAAAAATGAGCTGATTCTTAGACCAGTTTCTCAAGATGAATCTGGGGAGGGCTTGCCATATGCTCCTGAAAATTGGCCCAATCCTGGTGATAACTGGAGTTGGAGGGTGGGGAAGAGAGTTGCTATAACTGGCCATTTTCTGGATAGGTACCTTTATTCTCCTCGTGGTATTAGCGCGTCCGAAAACTCAGCTCGTAAAGGGCAAAGTTTTGCAAGCAAGCTTTCAGTTGAAAGATATATCCAGTCTGAGTTCCCTAATGCAGACGTTGAGGCTTTTTTTGCTTCATTCAGTTGGAAGATACCAGCAAAAAAGTCATCTTCAGCCCAAGGTACTCGGGTAAAACACATTCCATGCTCTCTACCCTCAAAAAAGATAGAATGCTCCGCATCTGCGTCCCAGAATGATAAAGTTGGTTGCAAGGCTGGAAATAAGAACTGTTATAGTTTATCTGTTTCTGAAAATCCATCTTCATCCAAATCCATGTCTTGTGGTATTTGCTGCAGTGAATCTCGCTTTTGCCGTGATTGCTGCTGTATACTTTGCTGCAAGATTATAGACACGACCGTGGAAAGTTATAGCTACATAAAATGTAAAGAAGTGGTGGGTGATGGATATATTTGTGGACATCTTTCTCATATAAAATGTGGTCTTAAATCGTATACAGCTGGGACAGTTGGAGGAAGCATTGGACTGGATGCTGAGTATTATTGTCGACGTTGTGATGCCAGAACGGATTTGGTATCACATGTAGAAAGATTTTTGCAGTCATGCCAATCAGCTGACTGCCAAGATGATGTTGAGGAGATCTTAAACCTTGGTTTATGTATTTTGCGTGGTTCGCACAAAATGAGAGCAAAGGAGTTGTTAAGACACATTGAACTGAGCATTGAGAAGATTAAAACTGGGACTTGCTTGGAAAAGATTTGGAAGATGGAGGAAGATAGCTCAGCAAATTGCACTGATGCACCTGATACTGCTGATTCTACAGAAAGTTCTCATGAAACTTCAGACTCCCTTATAAGCTCAGAATGGACTATGTCCACCCCTTTTGATCATTGGATCGAGTCCTTAAAACTTGAAGACGAAATTGATCAGGTTTTGCATGGACTGAAAAGATCACAGGAGTTCGAGTATAATTTAGCAGAAGAAAAGCTTCTATTACATAAAAATTATCTACATAACCTCTTTCAGCAACTTGAAAAGGAGCAAACTGAACTCAGACATCAAGCACCATCAACGGGACAAAATGCCGTATCAAACAGAGTGGACCAAATAAAACGAGAAGTAAAGAGACTGAAGAGAATGGAAAAGATTGCTGATGGATTTGGAATGACTCCGAAAGATATCCTCAAGGAGGACTTCCATTTGGATGTTGAAATAGAGATACGGAAGTGA
BLAST of CSPI03G13090 vs. TrEMBL
Match: A0A0A0L5I4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G146630 PE=4 SV=1) HSP 1 Score: 965.3 bits (2494), Expect = 2.8e-278 Identity = 484/487 (99.38%), Postives = 484/487 (99.38%), Query Frame = 1
BLAST of CSPI03G13090 vs. TrEMBL
Match: B9HUV4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s09660g PE=4 SV=1) HSP 1 Score: 490.0 bits (1260), Expect = 3.4e-135 Identity = 267/480 (55.62%), Postives = 333/480 (69.38%), Query Frame = 1
BLAST of CSPI03G13090 vs. TrEMBL
Match: M5XDT4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005166mg PE=4 SV=1) HSP 1 Score: 485.3 bits (1248), Expect = 8.5e-134 Identity = 266/483 (55.07%), Postives = 339/483 (70.19%), Query Frame = 1
BLAST of CSPI03G13090 vs. TrEMBL
Match: A0A067KVM5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02185 PE=4 SV=1) HSP 1 Score: 483.4 bits (1243), Expect = 3.2e-133 Identity = 255/480 (53.12%), Postives = 334/480 (69.58%), Query Frame = 1
BLAST of CSPI03G13090 vs. TrEMBL
Match: W9S9Q6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007075 PE=4 SV=1) HSP 1 Score: 479.2 bits (1232), Expect = 6.1e-132 Identity = 253/481 (52.60%), Postives = 329/481 (68.40%), Query Frame = 1
BLAST of CSPI03G13090 vs. TAIR10
Match: AT1G05410.1 (AT1G05410.1 Protein of unknown function (DUF1423)) HSP 1 Score: 427.9 bits (1099), Expect = 8.1e-120 Identity = 227/469 (48.40%), Postives = 309/469 (65.88%), Query Frame = 1
BLAST of CSPI03G13090 vs. TAIR10
Match: AT3G22520.1 (AT3G22520.1 unknown protein) HSP 1 Score: 104.8 bits (260), Expect = 1.6e-22 Identity = 49/95 (51.58%), Postives = 66/95 (69.47%), Query Frame = 1
BLAST of CSPI03G13090 vs. TAIR10
Match: AT4G14840.1 (AT4G14840.1 unknown protein) HSP 1 Score: 92.8 bits (229), Expect = 6.2e-19 Identity = 48/107 (44.86%), Postives = 67/107 (62.62%), Query Frame = 1
BLAST of CSPI03G13090 vs. NCBI nr
Match: gi|778678475|ref|XP_011650974.1| (PREDICTED: uncharacterized protein LOC101220879 [Cucumis sativus]) HSP 1 Score: 965.3 bits (2494), Expect = 4.0e-278 Identity = 484/487 (99.38%), Postives = 484/487 (99.38%), Query Frame = 1
BLAST of CSPI03G13090 vs. NCBI nr
Match: gi|700201845|gb|KGN56978.1| (hypothetical protein Csa_3G146630 [Cucumis sativus]) HSP 1 Score: 965.3 bits (2494), Expect = 4.0e-278 Identity = 484/487 (99.38%), Postives = 484/487 (99.38%), Query Frame = 1
BLAST of CSPI03G13090 vs. NCBI nr
Match: gi|659076411|ref|XP_008438665.1| (PREDICTED: uncharacterized protein LOC103483705 isoform X1 [Cucumis melo]) HSP 1 Score: 911.4 bits (2354), Expect = 6.9e-262 Identity = 455/486 (93.62%), Postives = 466/486 (95.88%), Query Frame = 1
BLAST of CSPI03G13090 vs. NCBI nr
Match: gi|659076413|ref|XP_008438666.1| (PREDICTED: uncharacterized protein LOC103483705 isoform X2 [Cucumis melo]) HSP 1 Score: 911.4 bits (2354), Expect = 6.9e-262 Identity = 455/486 (93.62%), Postives = 466/486 (95.88%), Query Frame = 1
BLAST of CSPI03G13090 vs. NCBI nr
Match: gi|743821760|ref|XP_011021502.1| (PREDICTED: protein OBERON 2-like [Populus euphratica]) HSP 1 Score: 492.3 bits (1266), Expect = 9.9e-136 Identity = 268/480 (55.83%), Postives = 332/480 (69.17%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |