CSPI03G11030 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAGGTGAAGATAGGAAAGAGGGAAATTCGAAAACGGGACATTCCAAAATGAGCAACGAACGTCCTCCGATTAGGGTTTTCGGCCAGCGCTCAATTTCATCGTCTTTTCTCTCCCGTTCTTCAAATCCGTAATCTCTCGATCACAGCTCCTTTTCTTTTCTTTTTTTTCACAAATTTATTCGCTTGTTAATTTTGTTGTACGTCTTTAACTTTTGCTCGAAATAGTTTCAAGAGTTCGAACGATGATTCGCAAAGCAAATTGTCGAAGAAGAATGCGCAACTGTCGCTCTCAGACTTCCTCGCTCGGAAACTGCCGGAGACTTCCGTTCCGCAGAGGACGGTGAAGGTAACGAGTTTGTTTCATTTTCTGCTCTGGTTGTCTGCTGAAAATTCGTCAGTACTAGGGTTTTAGAGTGCATTCTGTTTGGTCTGGTTGTCCTAATCGACCGAGAAAATCAAAATAAGGAGGTGAAATTGATGGAATTTAATGGCAATTCGCGATTCCTGCTTCATTGACGATTTGATTTCTACACTATTTCTCGAAGGAAATGTCAACTGCAGCATAATGCGAGACACAAACAAGGGTAAGAGGGGCAAAATCGAATTTTAAAGGATCGTGATAGCTATTGATTATTTTCTTTATACACAGGGGAAGTCCACGCCCTTCTCCTCGTTGCAGGGTCCAAGGAATTCGAATAATGCACCTATTGCTATTGACTGTGGGACGGATTCCCAGACCGAATCGGCTATTTCAAAGGTGCTTTTCGAACAGTTCAAGCGTTCTGAACCAAACCAATGTGAATGTTTAGTTCCAGGCAGTGCAAGTGAAAGAGATATTTTCAATACTGATGGTATATTAGACTCGAGAAAAAGAAAGAAATCAAATGAAGGGATTATTTCTACCACCCCATGTAATAAGCTTATTCGGTAACTTTGTATTGTTTGATTCTTTGGAGTTATTGTGTCTGAATTGCTGATGAAACTTGAATTTCGTTAACTTGGATCATCAGGTGAGAGCCAAACGAGGAAGATGAATGTGGTAGTTATAGGAGGCGACCCAAAACCCGACCAAAAAGGGACAGAGCCGATTCCTATTGCTAGAAACAAAAAGCCTAAACCCCTCTACAATCACTGTAAGTATTTGACATCTTCTAAGTTCTTTCAACGAAATCATTCTGAAAGATATCGTAATTCATGTCAATATTTTGTTTTTGCGTGTTGGGCAGATGCAAGTGGCTCCGGCTGGTGGGACAGCAACATGGAGGGTGTTGATAGTGAAGAGGTTGGCCTTGGTGAAGTATGGGAAGGAGTTGGGTCCACGACACTTGGAGGAATAGAGTGGCATTGACTCTTTTGGGGGCTTCATTCTCTTCCCATTGGAAACACTGTAAATATTCACTTTCTGTTTGAATATCTTTTTCAAGTTCTTTTTGAAAAAAAAGCCATGTTTCTGCTAGTTATTGACCTTTTATATTAAACTCTATGTCTACGTTTGGGTTGAGGGAAGTGGGATGAGGATAGAAGTAGAAATGGAAACACATCTCTATACAATTTTTGAAGCTTTAGATGTGAGGATAAACGATTTCCATGCATCATTTACATCAAAAGATGGTACTCATCTAAGTGAAGATGTATTCCCTCTATTATGTG ATGAGCAACGAACGTCCTCCGATTAGGGTTTTCGGCCAGCGCTCAATTTCATCGTCTTTTCTCTCCCGTTCTTCAAATCCTTTCAAGAGTTCGAACGATGATTCGCAAAGCAAATTGTCGAAGAAGAATGCGCAACTGTCGCTCTCAGACTTCCTCGCTCGGAAACTGCCGGAGACTTCCGTTCCGCAGAGGACGGTGAAGGGGAAGTCCACGCCCTTCTCCTCGTTGCAGGGTCCAAGGAATTCGAATAATGCACCTATTGCTATTGACTGTGGGACGGATTCCCAGACCGAATCGGCTATTTCAAAGGTGCTTTTCGAACAGTTCAAGCGTTCTGAACCAAACCAATGTGAATGTTTAGTTCCAGGCAGTGCAAGTGAAAGAGATATTTTCAATACTGATGGTATATTAGACTCGAGAAAAAGAAAGAAATCAAATGAAGGGATTATTTCTACCACCCCATGTGAGAGCCAAACGAGGAAGATGAATGTGGTAGTTATAGGAGGCGACCCAAAACCCGACCAAAAAGGGACAGAGCCGATTCCTATTGCTAGAAACAAAAAGCCTAAACCCCTCTACAATCACTATGCAAGTGGCTCCGGCTGGTGGGACAGCAACATGGAGGGTGTTGATAGTGAAGAGGTTGGCCTTGGTGAAGTATGGGAAGGAGTTGGGTCCACGACACTTGGAGGAATAGAGTGGCATTGA ATGAGCAACGAACGTCCTCCGATTAGGGTTTTCGGCCAGCGCTCAATTTCATCGTCTTTTCTCTCCCGTTCTTCAAATCCTTTCAAGAGTTCGAACGATGATTCGCAAAGCAAATTGTCGAAGAAGAATGCGCAACTGTCGCTCTCAGACTTCCTCGCTCGGAAACTGCCGGAGACTTCCGTTCCGCAGAGGACGGTGAAGGGGAAGTCCACGCCCTTCTCCTCGTTGCAGGGTCCAAGGAATTCGAATAATGCACCTATTGCTATTGACTGTGGGACGGATTCCCAGACCGAATCGGCTATTTCAAAGGTGCTTTTCGAACAGTTCAAGCGTTCTGAACCAAACCAATGTGAATGTTTAGTTCCAGGCAGTGCAAGTGAAAGAGATATTTTCAATACTGATGGTATATTAGACTCGAGAAAAAGAAAGAAATCAAATGAAGGGATTATTTCTACCACCCCATGTGAGAGCCAAACGAGGAAGATGAATGTGGTAGTTATAGGAGGCGACCCAAAACCCGACCAAAAAGGGACAGAGCCGATTCCTATTGCTAGAAACAAAAAGCCTAAACCCCTCTACAATCACTATGCAAGTGGCTCCGGCTGGTGGGACAGCAACATGGAGGGTGTTGATAGTGAAGAGGTTGGCCTTGGTGAAGTATGGGAAGGAGTTGGGTCCACGACACTTGGAGGAATAGAGTGGCATTGA
BLAST of CSPI03G11030 vs. TrEMBL
Match: A0A0A0L7Z9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G132540 PE=4 SV=1) HSP 1 Score: 467.6 bits (1202), Expect = 8.9e-129 Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 1
BLAST of CSPI03G11030 vs. TrEMBL
Match: A0A067FD53_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026914mg PE=4 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 2.0e-43 Identity = 113/239 (47.28%), Postives = 149/239 (62.34%), Query Frame = 1
BLAST of CSPI03G11030 vs. TrEMBL
Match: V4S1E5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005791mg PE=4 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 2.0e-43 Identity = 113/239 (47.28%), Postives = 148/239 (61.92%), Query Frame = 1
BLAST of CSPI03G11030 vs. TrEMBL
Match: W9R4A9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_000554 PE=4 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 3.1e-41 Identity = 112/240 (46.67%), Postives = 142/240 (59.17%), Query Frame = 1
BLAST of CSPI03G11030 vs. TrEMBL
Match: W9RML3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_010066 PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 9.1e-41 Identity = 111/240 (46.25%), Postives = 142/240 (59.17%), Query Frame = 1
BLAST of CSPI03G11030 vs. TAIR10
Match: AT4G13690.1 (AT4G13690.1 unknown protein) HSP 1 Score: 108.6 bits (270), Expect = 5.3e-24 Identity = 87/256 (33.98%), Postives = 124/256 (48.44%), Query Frame = 1
BLAST of CSPI03G11030 vs. NCBI nr
Match: gi|449432440|ref|XP_004134007.1| (PREDICTED: uncharacterized protein LOC101216371 [Cucumis sativus]) HSP 1 Score: 467.6 bits (1202), Expect = 1.3e-128 Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 1
BLAST of CSPI03G11030 vs. NCBI nr
Match: gi|659075873|ref|XP_008438377.1| (PREDICTED: uncharacterized protein LOC103483493 [Cucumis melo]) HSP 1 Score: 440.7 bits (1132), Expect = 1.7e-120 Identity = 221/235 (94.04%), Postives = 229/235 (97.45%), Query Frame = 1
BLAST of CSPI03G11030 vs. NCBI nr
Match: gi|641842224|gb|KDO61131.1| (hypothetical protein CISIN_1g026914mg [Citrus sinensis]) HSP 1 Score: 184.1 bits (466), Expect = 2.8e-43 Identity = 113/239 (47.28%), Postives = 149/239 (62.34%), Query Frame = 1
BLAST of CSPI03G11030 vs. NCBI nr
Match: gi|567855495|ref|XP_006420867.1| (hypothetical protein CICLE_v10005791mg [Citrus clementina]) HSP 1 Score: 184.1 bits (466), Expect = 2.8e-43 Identity = 113/239 (47.28%), Postives = 148/239 (61.92%), Query Frame = 1
BLAST of CSPI03G11030 vs. NCBI nr
Match: gi|985471548|ref|XP_015381282.1| (PREDICTED: uncharacterized protein LOC102615119 isoform X2 [Citrus sinensis]) HSP 1 Score: 182.2 bits (461), Expect = 1.1e-42 Identity = 112/239 (46.86%), Postives = 148/239 (61.92%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |