CSPI03G09000 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI03G09000
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Pollen-specific protein SF3
Location	Chr3 : 7415184 .. 7416332 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATTCACAGGAACATTGGATAAATGCAAGGCTTGTGATAAGACTGTTTATGTGGTTGAATTGCTTTCCCTTGAAGGGAATCCTTATCATAAGTCCTGCTTCAAATGTAGCCACTGCAAAGGCACTCTTTCGGTATGCTTTTATGTTCTTCTTTCATTTGTTCTTATTATGTGTCGTTCGTTATGATATCGATAATTTGACTCGGAGTCGATGGTTATGACAGATGAGTAGCTACTCATGGATGGATGGTGTCCTGTATTGCAAGACTCATTTTGAGCAACTCTTCAAGGAATCTGGAAATTTCAGCAAGAATTTTCAAAATGGTAAACATATCTTTTTCTATTATACTTCTTTTCCAATCAACATTTTTCTTTTAAGGGAAAAAATAAAAACCTTCCTAACATTCTCTCGTTTTCATTATATTGAAATGGCAACAGCCAAGCCTTCTGAGAAGCAAAATGATCTGGTATGCTCTCATTCTTTTCATTTTTCGTGCGGTTAGCATTCGTTTGATAACGGTTTGATCTTTAGTATTTAAATCACTCACAAACATGTCACAATGCGTACAAGATTTTACTTTTGCATAGATTAGGGGTCTAGATCTCCTGCGATATATATAATCATAACTAGATGTATAACTTTGTAACTTTCGAAACGTGTAGCAGTCAAGAGCTCCTAGCAAACTGTCCTCCATGTTCTCTGGAACTCAAGACAAATGTGCGGCCTGCTCGAAAACGGTTTATCCGTTGGAGAAGGTCTATAGTTCTTCATTTTTCTCTCTAAAAAATTATATATATATATATACAGGTAGAATGTTACTAGATTTGTTGACTGATCAAAAGCTTTTTTTTGGTTCCTAAATAAAAAAAAAAGGTGACTCTTGAGGGGGAATGTTACCATAAGAATTGCTTTAGATGTGCTCATGGTGGATGCCATTTAACACACTCTTCATATGCTGCTCTTGATGGAGTGTTGTACTGTAAGCATCATTTTGCTCAACTCTTCATGATCAAAGGAAACTACAACCATGTTCTTGAAGCTGCAGCAAACAAGAAAGCTCCCACGCCGCCTCCCGAACCAGCAGAGGAAGAAGAGGGCGCCACCGAAGCTCAGCCGCAGGCCGATGAAGCACCCGTAGAGCAAACT

mRNA sequence

ATGTCATTCACAGGAACATTGGATAAATGCAAGGCTTGTGATAAGACTGTTTATGTGGTTGAATTGCTTTCCCTTGAAGGGAATCCTTATCATAAGTCCTGCTTCAAATGTAGCCACTGCAAAGGCACTCTTTCGATGAGTAGCTACTCATGGATGGATGGTGTCCTGTATTGCAAGACTCATTTTGAGCAACTCTTCAAGGAATCTGGAAATTTCAGCAAGAATTTTCAAAATGCCAAGCCTTCTGAGAAGCAAAATGATCTGCAGTCAAGAGCTCCTAGCAAACTGTCCTCCATGTTCTCTGGAACTCAAGACAAATGTGCGGCCTGCTCGAAAACGGTTTATCCGTTGGAGAAGGTGACTCTTGAGGGGGAATGTTACCATAAGAATTGCTTTAGATGTGCTCATGGTGGATGCCATTTAACACACTCTTCATATGCTGCTCTTGATGGAGTGTTGTACTGTAAGCATCATTTTGCTCAACTCTTCATGATCAAAGGAAACTACAACCATGTTCTTGAAGCTGCAGCAAACAAGAAAGCTCCCACGCCGCCTCCCGAACCAGCAGAGGAAGAAGAGGGCGCCACCGAAGCTCAGCCGCAGGCCGATGAAGCACCCGTAGAGCAAACT

Coding sequence (CDS)

ATGTCATTCACAGGAACATTGGATAAATGCAAGGCTTGTGATAAGACTGTTTATGTGGTTGAATTGCTTTCCCTTGAAGGGAATCCTTATCATAAGTCCTGCTTCAAATGTAGCCACTGCAAAGGCACTCTTTCGATGAGTAGCTACTCATGGATGGATGGTGTCCTGTATTGCAAGACTCATTTTGAGCAACTCTTCAAGGAATCTGGAAATTTCAGCAAGAATTTTCAAAATGCCAAGCCTTCTGAGAAGCAAAATGATCTGCAGTCAAGAGCTCCTAGCAAACTGTCCTCCATGTTCTCTGGAACTCAAGACAAATGTGCGGCCTGCTCGAAAACGGTTTATCCGTTGGAGAAGGTGACTCTTGAGGGGGAATGTTACCATAAGAATTGCTTTAGATGTGCTCATGGTGGATGCCATTTAACACACTCTTCATATGCTGCTCTTGATGGAGTGTTGTACTGTAAGCATCATTTTGCTCAACTCTTCATGATCAAAGGAAACTACAACCATGTTCTTGAAGCTGCAGCAAACAAGAAAGCTCCCACGCCGCCTCCCGAACCAGCAGAGGAAGAAGAGGGCGCCACCGAAGCTCAGCCGCAGGCCGATGAAGCACCCGTAGAGCAAACT

Homology

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BLAST of CSPI03G09000 vs. Swiss-Prot
Match: PLI2C_ARATH (LIM domain-containing protein PLIM2c OS=Arabidopsis thaliana GN=PLIM2C PE=1 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 3.0e-81
Identity = 146/201 (72.64%), Postives = 167/201 (83.08%), Query Frame = 1


Query: 2   SFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKTH 61
           +FTGT DKCKACDKTVYV++L++LEG PYHKSCF+CSHC GTL + +YS MDGVLYCKTH
Sbjct: 3   AFTGTTDKCKACDKTVYVMDLMTLEGMPYHKSCFRCSHCNGTLVICNYSSMDGVLYCKTH 62

Query: 62  FEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLEKVT 121
           FEQLFKESGNFSKNFQ A  +EK ND  ++AP++LSS FSGTQDKCAAC KTVYPLEK+T
Sbjct: 63  FEQLFKESGNFSKNFQTAGKTEKSNDA-TKAPNRLSSFFSGTQDKCAACKKTVYPLEKMT 122

Query: 122 LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKA 181
           +EGE YHK CFRCAH GC LTHSSYAALDGVLYCK HF+QLF+ KGNYNHVL+AAAN + 
Sbjct: 123 MEGESYHKTCFRCAHSGCPLTHSSYAALDGVLYCKVHFSQLFLEKGNYNHVLQAAANHRR 182

Query: 182 PT---PPPEPAEEEEGATEAQ 200
            T      EP E+E   TE +
Sbjct: 183 STAEEDKTEPKEDEANPTEEE 202

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BLAST of CSPI03G09000 vs. Swiss-Prot
Match: PLI2B_ARATH (LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 8.8e-81
Identity = 145/208 (69.71%), Postives = 168/208 (80.77%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKC  CDKTVYVV++LS+EG PYHKSCF+C+HCKGTL MS+YS MDGVLYCKT
Sbjct: 1   MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQ   P + +    +R PSK+SS+F GTQDKCAAC KTVYPLEK+
Sbjct: 61  HFEQLFKESGNFSKNFQ---PGKTEKPELTRTPSKISSIFCGTQDKCAACEKTVYPLEKI 120

Query: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
            +EGEC+HK CFRCAHGGC LTHSSYA+LD VLYC+HHF QLFM KGNY HVL+AA +++
Sbjct: 121 QMEGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHVLQAANHRR 180

Query: 181 AP---TPPPEP-------AEEEEGATEA 199
                T PPEP       A+EE G +E+
Sbjct: 181 TASGNTLPPEPTEDVAVEAKEENGVSES 205

[Close]

BLAST of CSPI03G09000 vs. Swiss-Prot
Match: PLI2A_ARATH (LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana GN=PLIM2A PE=1 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 4.1e-78
Identity = 145/214 (67.76%), Postives = 171/214 (79.91%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKCKACDKTVYV++LL+LEGN YHKSCF+C+HCKGTL +S+YS MDGVLYCK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLEKV 120
           HFEQLFKESGN+SKNFQ  K +EK ND  +R PSKLSS FSGTQDKCA C KTVYPLEKV
Sbjct: 61  HFEQLFKESGNYSKNFQAGK-TEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           T+EGE YHK CFRC H GC LTHSSYA+L+GVLYCK HF QLF+ KG+YNHV +AAAN +
Sbjct: 121 TMEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAANHR 180

Query: 181 ------APTPPPEPAEEEEGATEAQPQADEAPVE 209
                   +PP +  + ++ A+  + + D+A  E
Sbjct: 181 RSASSGGASPPSDDHKPDDTASIPEAKEDDAAPE 213

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BLAST of CSPI03G09000 vs. Swiss-Prot
Match: WLI2A_ARATH (LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana GN=WLIN2A PE=1 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 4.8e-71
Identity = 121/183 (66.12%), Postives = 156/183 (85.25%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGT  KC+AC+KTVY VELLS +G  YHK+CFKCSHCK  L +S+YS M+GV+YC+ 
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFEQLFKESGNFSKNFQN-AKP-SEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLE 120
           HFEQLFKESG+FSKNFQ+ AKP ++K     +R PS+L+ MFSGTQDKCA C+KTVYP+E
Sbjct: 61  HFEQLFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIE 120

Query: 121 KVTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAAN 180
           KVT+E +CYHK+CF+C+HGGC ++ S+YAAL+G+LYCKHHFAQLF  KG+YNH++++A+ 
Sbjct: 121 KVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASI 180

Query: 181 KKA 182
           K+A
Sbjct: 181 KRA 183

[Close]

BLAST of CSPI03G09000 vs. Swiss-Prot
Match: WLI2B_ARATH (LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana GN=WLIM2B PE=1 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 4.1e-70
Identity = 119/182 (65.38%), Postives = 153/182 (84.07%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGT  KCKAC+KTVY VELLS +G  YHKSCFKC+HCK  L +SSYS M+GVLYCK 
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQN-AKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLEK 120
           HFEQLFKESG+F+KNFQ+ AK ++K     +R PS+++  FSGTQ+KCA CSKTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANK 180
           VT+E + YHK+CF+C+HGGC ++ S+YAAL+G+LYCKHHFAQLF  KG+YNH++++A+ K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

Query: 181 KA 182
           ++
Sbjct: 181 RS 182

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BLAST of CSPI03G09000 vs. TrEMBL
Match: A0A0A0L4A1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122620 PE=4 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 5.3e-117
Identity = 208/210 (99.05%), Postives = 208/210 (99.05%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSC KCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCLKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQNAKPSEKQNDL SRAPSKLSSMFSGTQDKCAACSKTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDL-SRAPSKLSSMFSGTQDKCAACSKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK
Sbjct: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180

Query: 181 APTPPPEPAEEEEGATEAQPQADEAPVEQT 211
           APTPPPEPAEEEEGATEAQPQADEAPVEQT
Sbjct: 181 APTPPPEPAEEEEGATEAQPQADEAPVEQT 209

[Close]

BLAST of CSPI03G09000 vs. TrEMBL
Match: A0A0A0L6A8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122580 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 1.7e-94
Identity = 171/210 (81.43%), Postives = 187/210 (89.05%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           M+FTGTLDKCKACDKTVYVV+LL+LEGNPYHK+CFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQ  K S+K NDL +R PSKLSSMFSGTQDKC+ C+KTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQT-KSSDKPNDL-TRTPSKLSSMFSGTQDKCSVCTKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           +LEGECYHK CFRCAHGGCHLTH SYAALDGVLYCKHHFAQLFM+KGNYNHVLEAAANKK
Sbjct: 121 SLEGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKK 180

Query: 181 APTPPPEPAEEEEGATEAQPQADEAPVEQT 211
             TPP +  +E+    E  P++ E  VEQ+
Sbjct: 181 TTTPPADHTDED---AEPSPRSGEQAVEQS 205

[Close]

BLAST of CSPI03G09000 vs. TrEMBL
Match: G7L3J0_MEDTR (GATA type zinc finger transcription factor family protein OS=Medicago truncatula GN=MTR_7g076720 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 3.5e-92
Identity = 168/209 (80.38%), Postives = 185/209 (88.52%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKCKACDKTVYVV+LL+LEG PYHKSC KC+HCKG L+MS+YS MDGVLYCK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVVDLLTLEGIPYHKSCLKCTHCKGNLTMSTYSSMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQ AK SEK N+L +R PS+LSSMFSGT DKCA C+KTVYPLEK+
Sbjct: 61  HFEQLFKESGNFSKNFQ-AKSSEKINELMNRTPSRLSSMFSGTLDKCAVCTKTVYPLEKM 120

Query: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           +LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHF QLFM KGNYNHVL+AAANKK
Sbjct: 121 SLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFQQLFMEKGNYNHVLQAAANKK 180

Query: 181 APTPPPEPAEEEEGATEAQPQADEAPVEQ 210
             TPPPEPA+EEE    ++P+  EA  E+
Sbjct: 181 NSTPPPEPADEEE---PSKPEETEAQAEE 205

[Close]

BLAST of CSPI03G09000 vs. TrEMBL
Match: V7B4U4_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G067500g PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 1.3e-91
Identity = 160/204 (78.43%), Postives = 183/204 (89.71%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKCKACDKTVYVV+LL+LEG PYHK+CF+CSHCKG L+MS+YS MDGVLYCK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVVDLLTLEGTPYHKNCFRCSHCKGCLTMSTYSSMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQ A+ S+KQN++ ++ P++LSSMFSGT DKC+ CSKTVYPLEK+
Sbjct: 61  HFEQLFKESGNFSKNFQTARSSDKQNEV-NKTPNRLSSMFSGTLDKCSVCSKTVYPLEKM 120

Query: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           TLEGECYHKNCFRCAH GCHLTHSSYAALDGVLYC+HHF QLFM KGNY+HVL+AAAN+K
Sbjct: 121 TLEGECYHKNCFRCAHAGCHLTHSSYAALDGVLYCRHHFQQLFMEKGNYHHVLQAAANRK 180

Query: 181 APTPPPEPAEEEEGATEAQPQADE 205
             TPPPEPAEEEE     +P+ +E
Sbjct: 181 NATPPPEPAEEEEAPKPEEPEEEE 203

[Close]

BLAST of CSPI03G09000 vs. TrEMBL
Match: W9RX88_9ROSA (Pollen-specific protein SF3 OS=Morus notabilis GN=L484_006564 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 1.1e-90
Identity = 164/211 (77.73%), Postives = 178/211 (84.36%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           M+FTGTLDKCKAC+KTVYVV+++SLEG PYHKSCFKCSHCKGTLSMSSYSWMDGVLYCK 
Sbjct: 1   MAFTGTLDKCKACNKTVYVVDMMSLEGVPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQN--------------------AKPSEKQNDLQSRAPSKLSSMF 120
           HFEQLFKESGNFSKNFQ                     AK SE+QND  +RAPSKLSS+F
Sbjct: 61  HFEQLFKESGNFSKNFQTVFLLGLFANNNKRVGEKFVTAKSSERQNDQLARAPSKLSSLF 120

Query: 121 SGTQDKCAACSKTVYPLEKVTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFA 180
           SGTQDKCA CSKTVYPLEKV+LEGECYHK+CFRCAHGGC LTHSSYAALDGVLYCKHHF 
Sbjct: 121 SGTQDKCATCSKTVYPLEKVSLEGECYHKSCFRCAHGGCPLTHSSYAALDGVLYCKHHFQ 180

Query: 181 QLFMIKGNYNHVLEAAANKKAPTPPPEPAEE 192
           QLFM KGNY+HVL+AAANKK  TPPPE A++
Sbjct: 181 QLFMEKGNYSHVLKAAANKKNATPPPETADQ 211

[Close]

BLAST of CSPI03G09000 vs. TAIR10
Match: AT3G61230.1 (AT3G61230.1 GATA type zinc finger transcription factor family protein)

HSP 1 Score: 302.8 bits (774), Expect = 1.7e-82
Identity = 146/201 (72.64%), Postives = 167/201 (83.08%), Query Frame = 1


Query: 2   SFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKTH 61
           +FTGT DKCKACDKTVYV++L++LEG PYHKSCF+CSHC GTL + +YS MDGVLYCKTH
Sbjct: 3   AFTGTTDKCKACDKTVYVMDLMTLEGMPYHKSCFRCSHCNGTLVICNYSSMDGVLYCKTH 62

Query: 62  FEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLEKVT 121
           FEQLFKESGNFSKNFQ A  +EK ND  ++AP++LSS FSGTQDKCAAC KTVYPLEK+T
Sbjct: 63  FEQLFKESGNFSKNFQTAGKTEKSNDA-TKAPNRLSSFFSGTQDKCAACKKTVYPLEKMT 122

Query: 122 LEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKA 181
           +EGE YHK CFRCAH GC LTHSSYAALDGVLYCK HF+QLF+ KGNYNHVL+AAAN + 
Sbjct: 123 MEGESYHKTCFRCAHSGCPLTHSSYAALDGVLYCKVHFSQLFLEKGNYNHVLQAAANHRR 182

Query: 182 PT---PPPEPAEEEEGATEAQ 200
            T      EP E+E   TE +
Sbjct: 183 STAEEDKTEPKEDEANPTEEE 202

[Close]

BLAST of CSPI03G09000 vs. TAIR10
Match: AT1G01780.1 (AT1G01780.1 GATA type zinc finger transcription factor family protein)

HSP 1 Score: 301.2 bits (770), Expect = 4.9e-82
Identity = 145/208 (69.71%), Postives = 168/208 (80.77%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKC  CDKTVYVV++LS+EG PYHKSCF+C+HCKGTL MS+YS MDGVLYCKT
Sbjct: 1   MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQ   P + +    +R PSK+SS+F GTQDKCAAC KTVYPLEK+
Sbjct: 61  HFEQLFKESGNFSKNFQ---PGKTEKPELTRTPSKISSIFCGTQDKCAACEKTVYPLEKI 120

Query: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
            +EGEC+HK CFRCAHGGC LTHSSYA+LD VLYC+HHF QLFM KGNY HVL+AA +++
Sbjct: 121 QMEGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHVLQAANHRR 180

Query: 181 AP---TPPPEP-------AEEEEGATEA 199
                T PPEP       A+EE G +E+
Sbjct: 181 TASGNTLPPEPTEDVAVEAKEENGVSES 205

[Close]

BLAST of CSPI03G09000 vs. TAIR10
Match: AT2G45800.1 (AT2G45800.1 GATA type zinc finger transcription factor family protein)

HSP 1 Score: 292.4 bits (747), Expect = 2.3e-79
Identity = 145/214 (67.76%), Postives = 171/214 (79.91%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKCKACDKTVYV++LL+LEGN YHKSCF+C+HCKGTL +S+YS MDGVLYCK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLEKV 120
           HFEQLFKESGN+SKNFQ  K +EK ND  +R PSKLSS FSGTQDKCA C KTVYPLEKV
Sbjct: 61  HFEQLFKESGNYSKNFQAGK-TEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           T+EGE YHK CFRC H GC LTHSSYA+L+GVLYCK HF QLF+ KG+YNHV +AAAN +
Sbjct: 121 TMEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAANHR 180

Query: 181 ------APTPPPEPAEEEEGATEAQPQADEAPVE 209
                   +PP +  + ++ A+  + + D+A  E
Sbjct: 181 RSASSGGASPPSDDHKPDDTASIPEAKEDDAAPE 213

[Close]

BLAST of CSPI03G09000 vs. TAIR10
Match: AT2G39900.1 (AT2G39900.1 GATA type zinc finger transcription factor family protein)

HSP 1 Score: 268.9 bits (686), Expect = 2.7e-72
Identity = 121/183 (66.12%), Postives = 156/183 (85.25%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGT  KC+AC+KTVY VELLS +G  YHK+CFKCSHCK  L +S+YS M+GV+YC+ 
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFEQLFKESGNFSKNFQN-AKP-SEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLE 120
           HFEQLFKESG+FSKNFQ+ AKP ++K     +R PS+L+ MFSGTQDKCA C+KTVYP+E
Sbjct: 61  HFEQLFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIE 120

Query: 121 KVTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAAN 180
           KVT+E +CYHK+CF+C+HGGC ++ S+YAAL+G+LYCKHHFAQLF  KG+YNH++++A+ 
Sbjct: 121 KVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASI 180

Query: 181 KKA 182
           K+A
Sbjct: 181 KRA 183

[Close]

BLAST of CSPI03G09000 vs. TAIR10
Match: AT3G55770.7 (AT3G55770.7 GATA type zinc finger transcription factor family protein)

HSP 1 Score: 239.2 bits (609), Expect = 2.3e-63
Identity = 117/216 (54.17%), Postives = 150/216 (69.44%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGT  KCKAC+KTVY VELLS +G  YHKSCFKC+HCK  L +SSYS M+GVLYCK 
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQN-AKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLEK 120
           HFEQLFKESG+F+KNFQ+ AK ++K     +R PS+++  FSGTQ+KCA CSKTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTLE----------------------GECYH------------KNCFRCAHGGCHLTHSS 180
           +                         G CY             K+CF+C+HGGC ++ S+
Sbjct: 121 IHNPLSYRELARKPNVLHRCIDPGDIGSCYFNLHVTVESQTYHKSCFKCSHGGCPISPSN 180

Query: 181 YAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKKA 182
           YAAL+G+LYCKHHFAQLF  KG+YNH++++A+ K++
Sbjct: 181 YAALEGILYCKHHFAQLFKEKGSYNHLIKSASIKRS 216

[Close]

BLAST of CSPI03G09000 vs. NCBI nr
Match: gi|778677275|ref|XP_004134333.2| (PREDICTED: LIM domain-containing protein PLIM2b-like isoform X1 [Cucumis sativus])

HSP 1 Score: 434.5 bits (1116), Expect = 1.1e-118
Identity = 209/210 (99.52%), Postives = 209/210 (99.52%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSC KCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCLKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK
Sbjct: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180

Query: 181 APTPPPEPAEEEEGATEAQPQADEAPVEQT 211
           APTPPPEPAEEEEGATEAQPQADEAPVEQT
Sbjct: 181 APTPPPEPAEEEEGATEAQPQADEAPVEQT 210

[Close]

BLAST of CSPI03G09000 vs. NCBI nr
Match: gi|778677278|ref|XP_011650764.1| (PREDICTED: LIM domain-containing protein PLIM2b-like isoform X2 [Cucumis sativus])

HSP 1 Score: 428.3 bits (1100), Expect = 7.6e-117
Identity = 208/210 (99.05%), Postives = 208/210 (99.05%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSC KCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCLKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQNAKPSEKQNDL SRAPSKLSSMFSGTQDKCAACSKTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDL-SRAPSKLSSMFSGTQDKCAACSKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK
Sbjct: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180

Query: 181 APTPPPEPAEEEEGATEAQPQADEAPVEQT 211
           APTPPPEPAEEEEGATEAQPQADEAPVEQT
Sbjct: 181 APTPPPEPAEEEEGATEAQPQADEAPVEQT 209

[Close]

BLAST of CSPI03G09000 vs. NCBI nr
Match: gi|659075311|ref|XP_008438077.1| (PREDICTED: pollen-specific protein SF3-like isoform X1 [Cucumis melo])

HSP 1 Score: 426.0 bits (1094), Expect = 3.8e-116
Identity = 207/210 (98.57%), Postives = 208/210 (99.05%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAAC+KTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACTKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK
Sbjct: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180

Query: 181 APTPPPEPAEEEEGATEAQPQADEAPVEQT 211
           A TPPPEPAEEEEGATEAQPQADEA VEQT
Sbjct: 181 ATTPPPEPAEEEEGATEAQPQADEA-VEQT 209

[Close]

BLAST of CSPI03G09000 vs. NCBI nr
Match: gi|659075313|ref|XP_008438078.1| (PREDICTED: pollen-specific protein SF3-like isoform X2 [Cucumis melo])

HSP 1 Score: 419.5 bits (1077), Expect = 3.5e-114
Identity = 206/210 (98.10%), Postives = 207/210 (98.57%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQNAKPSEKQNDL SRAPSKLSSMFSGTQDKCAAC+KTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDL-SRAPSKLSSMFSGTQDKCAACTKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK
Sbjct: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180

Query: 181 APTPPPEPAEEEEGATEAQPQADEAPVEQT 211
           A TPPPEPAEEEEGATEAQPQADEA VEQT
Sbjct: 181 ATTPPPEPAEEEEGATEAQPQADEA-VEQT 208

[Close]

BLAST of CSPI03G09000 vs. NCBI nr
Match: gi|659075295|ref|XP_008438068.1| (PREDICTED: pollen-specific protein SF3-like [Cucumis melo])

HSP 1 Score: 359.8 bits (922), Expect = 3.3e-96
Identity = 174/210 (82.86%), Postives = 188/210 (89.52%), Query Frame = 1


Query: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60
           M+FTGTLDKCKACDKTVYVV+LL+LEGNPYHK+CFKCSHCKGTLSMSSYSWMDGVLYCKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLQSRAPSKLSSMFSGTQDKCAACSKTVYPLEKV 120
           HFEQLFKESGNFSKNFQ  KPSE+QNDL +R PSKLSSMF GTQDKC+ C+KTVYPLEKV
Sbjct: 61  HFEQLFKESGNFSKNFQT-KPSERQNDL-TRTPSKLSSMFCGTQDKCSVCTKTVYPLEKV 120

Query: 121 TLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLEAAANKK 180
           TLEGECYHK CFRCAHGGCHLTH SYAALDGVLYCKHHFAQLFM+KGNYNHVLEAAANKK
Sbjct: 121 TLEGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLEAAANKK 180

Query: 181 APTPPPEPAEEEEGATEAQPQADEAPVEQT 211
             TPP E  +E+    E  P++ E  VEQ+
Sbjct: 181 TTTPPAEHTDED---AEPSPRSGEQAVEQS 205

The following BLAST results are available for this feature:

BLAST of CSPI03G09000 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PLI2C_ARATH	3.0e-81	72.64	LIM domain-containing protein PLIM2c OS=Arabidopsis thaliana GN=PLIM2C PE=1 SV=1	[more]
PLI2B_ARATH	8.8e-81	69.71	LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana GN=PLIM2B PE=1 SV=1	[more]
PLI2A_ARATH	4.1e-78	67.76	LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana GN=PLIM2A PE=1 SV=1	[more]
WLI2A_ARATH	4.8e-71	66.12	LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana GN=WLIN2A PE=1 SV=1	[more]
WLI2B_ARATH	4.1e-70	65.38	LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana GN=WLIM2B PE=1 SV=1	[more]

BLAST of CSPI03G09000 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4A1_CUCSA	5.3e-117	99.05	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122620 PE=4 SV=1	[more]
A0A0A0L6A8_CUCSA	1.7e-94	81.43	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122580 PE=4 SV=1	[more]
G7L3J0_MEDTR	3.5e-92	80.38	GATA type zinc finger transcription factor family protein OS=Medicago truncatula...	[more]
V7B4U4_PHAVU	1.3e-91	78.43	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G067500g PE=4 SV=1	[more]
W9RX88_9ROSA	1.1e-90	77.73	Pollen-specific protein SF3 OS=Morus notabilis GN=L484_006564 PE=4 SV=1	[more]

BLAST of CSPI03G09000 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G61230.1	1.7e-82	72.64	GATA type zinc finger transcription factor family protein	[more]
AT1G01780.1	4.9e-82	69.71	GATA type zinc finger transcription factor family protein	[more]
AT2G45800.1	2.3e-79	67.76	GATA type zinc finger transcription factor family protein	[more]
AT2G39900.1	2.7e-72	66.12	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.7	2.3e-63	54.17	GATA type zinc finger transcription factor family protein	[more]

BLAST of CSPI03G09000 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778677275\|ref\|XP_004134333.2\|	1.1e-118	99.52	PREDICTED: LIM domain-containing protein PLIM2b-like isoform X1 [Cucumis sativus...	[more]
gi\|778677278\|ref\|XP_011650764.1\|	7.6e-117	99.05	PREDICTED: LIM domain-containing protein PLIM2b-like isoform X2 [Cucumis sativus...	[more]
gi\|659075311\|ref\|XP_008438077.1\|	3.8e-116	98.57	PREDICTED: pollen-specific protein SF3-like isoform X1 [Cucumis melo]	[more]
gi\|659075313\|ref\|XP_008438078.1\|	3.5e-114	98.10	PREDICTED: pollen-specific protein SF3-like isoform X2 [Cucumis melo]	[more]
gi\|659075295\|ref\|XP_008438068.1\|	3.3e-96	82.86	PREDICTED: pollen-specific protein SF3-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001781	Znf_LIM

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009247	glycolipid biosynthetic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009707	chloroplast outer membrane
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0008194	UDP-glycosyltransferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G09000.1	CSPI03G09000.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001781	Zinc finger, LIM-type	GENE3D	G3DSA:2.10.110.10		coord: 4..71 score: 1.8E-21coord: 100..169 score: 2.7
IPR001781	Zinc finger, LIM-type	PFAM	PF00412	LIM	coord: 107..162 score: 8.7E-11coord: 10..65 score: 3.4
IPR001781	Zinc finger, LIM-type	SMART	SM00132	lim_4	coord: 106..158 score: 4.3E-13coord: 9..61 score: 1.1
IPR001781	Zinc finger, LIM-type	PROSITE	PS00478	LIM_DOMAIN_1	coord: 10..44 scor
IPR001781	Zinc finger, LIM-type	PROFILE	PS50023	LIM_DOMAIN_2	coord: 105..165 score: 12.504coord: 8..68 score: 13
None	No IPR available	PANTHER	PTHR24206	FAMILY NOT NAMED	coord: 1..204 score: 4.5E
None	No IPR available	PANTHER	PTHR24206:SF22	PROTEIN PLIM2A	coord: 1..204 score: 4.5E
None	No IPR available	unknown	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 36..76 score: 6.55E-15coord: 133..172 score: 1.14E-13coord: 99..132 score: 2.14E-9coord: 3..35 score: 9.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI03G09000	CmaCh06G010970	Cucurbita maxima (Rimu)	cmacpiB826

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI03G09000	Watermelon (97103) v2	cpiwmbB209
CSPI03G09000	Wax gourd	cpiwgoB272
CSPI03G09000	Wild cucumber (PI 183967)	cpicpiB105
CSPI03G09000	Cucumber (Gy14) v1	cgycpiB383
CSPI03G09000	Cucurbita maxima (Rimu)	cmacpiB255
CSPI03G09000	Cucurbita maxima (Rimu)	cmacpiB611
CSPI03G09000	Cucurbita moschata (Rifu)	cmocpiB243
CSPI03G09000	Cucurbita moschata (Rifu)	cmocpiB814
CSPI03G09000	Cucumber (Chinese Long) v2	cpicuB120
CSPI03G09000	Melon (DHL92) v3.5.1	cpimeB230
CSPI03G09000	Melon (DHL92) v3.5.1	cpimeB249
CSPI03G09000	Watermelon (Charleston Gray)	cpiwcgB226
CSPI03G09000	Watermelon (Charleston Gray)	cpiwcgB246
CSPI03G09000	Watermelon (97103) v1	cpiwmB231
CSPI03G09000	Watermelon (97103) v1	cpiwmB251
CSPI03G09000	Cucurbita pepo (Zucchini)	cpecpiB611
CSPI03G09000	Cucurbita pepo (Zucchini)	cpecpiB861
CSPI03G09000	Bottle gourd (USVL1VR-Ls)	cpilsiB207
CSPI03G09000	Melon (DHL92) v3.6.1	cpimedB224
CSPI03G09000	Melon (DHL92) v3.6.1	cpimedB246
CSPI03G09000	Cucumber (Gy14) v2	cgybcpiB110
CSPI03G09000	Silver-seed gourd	carcpiB0651
CSPI03G09000	Silver-seed gourd	carcpiB0677
CSPI03G09000	Cucumber (Chinese Long) v3	cpicucB144