CSPI03G04530 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G04530
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionArginine/serine-rich splicing factor, putative
LocationChr3 : 3683150 .. 3688346 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTGTACTAAAAATACAAACAATAATAGGAAAAAATAAAATAATCACAAATCATATTTTTTATAAATTAAAATTAAGGATTAAAAAAAAAAGAATTAAGAAAAAAGAGACTACAAGCAACCCAGCGGTTCGCACTTGTCTCTTTCTCTTGCAATTCTCATTTCTCTCCGGCAGCGGCTACTACGACGGCGACGCGGCTTCTCTCGGGTCACGACCAGGTGACGGCGCAACCCACCTCAGATCTACAATACAACCCACCTCCAGCGTTTGATCGCCTACGCAACAACGTATCTCCGCCACACTCGGATCTGCAACGGCCTCACCTCGGGTCGCTGGATCTGGCTACACACACATCTCGACGGGTCCGATCTACGGTGGAAAGTCATTCGGACGACGATCGAGACTCGCGGTAAGTAACTCAGTGTCTCAGTTCTCCTTCGGTTACGATTTCGCAAGATCCAAGTCGGCAGCGACGGTTTCAGGAACTCGAACAATTAGCAATTGAAGCACATTAAGGAGGAACATAGTAAGTGTTTCTCATTTTAGGACTTTTTGATTCTATGACTTAAATTTTCTTGTATGCTTCTGGTTGCGCATCAAATTGTGTTGTGAATTGTATGTTTGGATATGTTTGGGAACGAACACTTTTCTTTTCTTATTTTTTTCTCTTTTCATTTTATCACAGTTGCTTATGTTAATGTCAAATTGTATATTTTTCTGTTAACTGTTAGGTTGATAGTTGAAATTATGGAGTTCCATTGGATGATTATGGTCGGCCATTTACAAGAATGATACCTCTGTAACCATATGATTGACCTACTGAAAAATGAAAACATGACCTAATTAGAAGAGATAGGTGATGCGTTAAATCTATGGTAGACCACATACTTGGTATTTATTATTTACGGGTTTTTTTTTAATTCAAATGTTGTGATTGTTAGACACATTGCTGTGAGATTAGTTGAGGTGCTTGTAAGCTTGTCTTATAGTTACAAATATATAAAAAAAAGGGAAAGGATGATACCTCTGTAGTGATGATCAATGAGACTAGATGAGCTTGTCTAAGAATGATACCTGGTGTTTTGCTCTAGGCTCCAGAAAGCATTTTTATAGCACTAAAAGTTGTGGTTGCAAGTGGTTAGAATTTGGAAATTAGAACCTCAAATGTTGGATATAGCTGGTCAAACTTGTAAAGCCTTTTATATGAACCAAAAGGTCATATATTTATTTCCTTTTCCCCTTCTCTCTTTGTCAATCATGGTTCCTCACTTATGATATCTACTTCAAATATTAAAACAGTTATTATTATTCAGATGAACAATGCCTGAAAGCGTTTTATGATGGTTTCAGTTTTGGACTCTGTTAACCACAAACTGCAAGTTTTTTTTTTAAAAAAATTTTCTTTTGGGGAATTAGTTAAATAGCAAATAAAAACATTACATGGGAAAACAATGTTAATTGATTAATTACGATTTTGTACACTGTACTTACAATTCAGATATCCAAATTTAGTCTCAACTCATAATACTTGAAATTTGTCCTCACTGTTTGTTTATTGTTTATTTTTTGTTTTATTATGTTAAGTCTTAATTAACCTTCCCTCTATCATTTTTGAAAACACATTCACAGTTGTCTTTTCTTGAATGGAATGAGATCACAAGTATAAGGATCAGAAGAGAATTATTTATAATTTTAAAAACCAAACGATAATGTATCACATTTAGAAGTGTTGCAGTACTATAAATATTATTTTTTTAAGAAGCAATTCTTTAGGAAAAACAATTTGACACAGGCTTGATCAACTTATTTGAAGCTTAAGTACTGCATACTTGTTGTTGATTCTTAAATACGTACTTCACTTTTTACAATTCATTTCAAATAACTTTCTTGTTGATGTGGTGAAACTAGGTTTCGGGAACTATGATGCCTTTGTATATCTTCATTTTTTATTTTTACAGAAGTAATAATAGGATATATATGCTGTATTATTTTTTATATAAATATAATATAAAAGTACCGATATATTTAAAAGTACAATATCTTGTATGTTATTTTGTAAATTTGGACACAGGCTTATTTGCAAAAGGCAAGTGCATCATGGTTATGATTTTTTTTTTTTCACTCGGGATTATTTTCAAATAGTTGATATCTGGTTCCCTTTTGCAGTTCACGTTTCTTTTATAACTCTCCCTCCTAGGTAGGTTATTCATTTTTATTTTCGTATATCAGTGAAAAGTTTGCTTGTTGTTGAAATAAAATGGTTGTCGGGTTGATGTGGTGAAATTAAGTTTCATGAACTTAATGCCATGTTGGTATGCTTTTCTGTTTTATAGTGCAAGGGATATGTTAAATGTTGCATTGTTTTTCCAATTTTTCTTCAGGTAGTATGAAGCCAATTTTTTGTGGAAACTTCGAGTATGATGCTCGACAGCCTGATCTGGAAAGACTTTTTAGTCGATATGGAAAAGTTGATAGAGTAGATATGAAATCTGGTGAGCTTCTAGCCGTAGAATGCATCTTTATTTTTAAATCCTTTTTTTATCTAATAAACTTATAAGACGTATACTAGAAACACAGAAGAGGGCATTTGTGTTCTTTTCCTGAATTTGTTTTGAAGTAGTGTGTAACTTTTTCACTCGGATCATACAAATTGCCAAAAGGAAAAACAGAAATTGTAATTTGCAGAGTCGCTGATAATATTTAATATATGAAAAATGCTGAACTGAAAAAGTAACTCTATCCACCAAGAAACTGTTGGATTCATTATCGGTAAGACAACCCAGCGGTTGGAAATTCCTCCAAAGCAGTTCTTGTTGCATATGGTGCCTTGCAATACGAATGGGCATCGTCCAGCATATGGAAATCAGAGAAGGCAACATTTGTCGAGTTTTCGGTGGAGGATTCTAAAAAAGTTTTGAGAAAAGAAGAGCGTATATTTTAAATCCTAAAACTCCTTGGCCAGAATTTTCTTTGGTGCAGGATTTCCTTCGCATATTCATAATCTCCTTGGATAAGGATTGGTCTACAGAATTGAGTTTTCCACCTCTGACAGGCTTCCTCTTCTTGTTTCCAAGAAGATCCATGATCCTCAATGGCACTACCACCTTACATTTTCCTCAGACACTTTGCTTTCCATTCCTCGTGACTTTTGCCTGCCTACAATTTCATACGTTGTTTCGAGGTTGAAACATTGTCAACCTTAGCTCCAAGGCTGCGGAATAATGGAGAAGGCACTTTCTATTTGTAGACCTACCATGAGACATCCTGTTTTTCATTGCTCCTTGACACCACTTAGTTCACAATACAAGGTCTGTTGCTAAATTCACTGGTAACTTAGTCTATAGATTTCACGGTGGTTGCAAATATTTCTTTCTTATGGTAAGAACTTTTTGTGGTTTGTTGAATATATGTTCTAGAAAGGTGATGTTGCATTTTGAGGAGTTCATCAGTGGGAAAATTCTCAGTCTTGTAACATTGTTAGTGTCTCATAGATCCACAGTTAGTTATTTAGTTTTGGTTGTTTGATTGGTTTCCAGGGTTTGCTTTTATCTACATGGAGGATGAGAGAGAGGCTGAGGATGCTATCCATGCACTCGATCGGAGAGAATTTGGCCGAAAGGGCCGCAGACTACGTGTTGAGTGGACCAAAGTAACGTACATTGATTTGGCACATTTTCCAACAAAGTCTTTCCTTTCATTGATCATTATTTACCATAGCTTCAACTGTAGTTTGTATTTTGATTGATCATTATTTTTTCTGTAGCAAGAGCGTGGCATTAGAAGACCTAGTGGAGGTGGAGGTGGAAGTGGAAGTGGAGGCGGTTCGAGGAGATCCTCTACTAACACAAGACCTTCAAAAACTTTATTTGTCATTAACTTTGATCCATATCATACAAGGATAAGAGATTTGGAGAGGCACTTCGATCCGTATGGTAAGATATTGAATGTCAGGATTCGAAGGAATTTTGCATTTGTCCAGTATGAACTGCAGGAGGATGCCACTAGAGCATTGGAGGTTACAAACATGAGGTGCGTTTTTCTTCTTTGAATTACATTTTAAGTGAGTAGAAGGTCACTATATTGTTATTGTTATTGTTATGTGCCTTAATTATTATTATTATTATATTGTGTACAGCAAATTGATGGATCGAGTGATTTCTGTGGAATATGCTGTTCGGGATGATGATGAGAAAAGAAATGGATATAGTCCAGATAGGAATCGTGATAGGTCTCCTGATAGAAAACGACGATCCCCAAGTCCTTATAGAAGGGAGCGAGGAAGCCCCGATTATGGCAATGGTATTAGCCGCAGTCCATATAGGAGGCAAAGGGCTAGTCCTGATTATGGAAGTCGCCGTAGTCCGAGTCCTTATCAGAGAGAGAGGGAGAGAGGATCTCCCGATTATAGCCGTGGTCGTAGTCCCAAGCATAGTCCTTATAGGAGGGAGAGAGAGAGATCAAGTGACCATATTAGGGCTCCCAGCCACAGTCCTCCCCATCAGAGGGAAAGACCAAATGATGACCGAATCCCCAACCGAAGTCCTAGTCCCTACAGGAGAGAGAGGGAGAGGGGGAGTCCTATTGGTGGACGTGGCACAAGCTTTAGTCCTCGTGATAGAGAAAGGTTGAACCCGGACAACGGTCATGATCACCAGGAGAATACAGTAGCTGAACCTGGTGAGTGCCCCAGTTATAGTGGCACTCAGAGCCCAAAGCATCGGGGTTATAACAGGTTTGTACTACGAGTTCATTTGATTGTTTTTAGTATTACTATTCTTGATTATTTTTCGAATTTTTTTGTCTTATGCCTGTGTTCGTGTTATGGTTTTGCAGCAGCCGTTCACCACAAGCAGAGGAATGATGAACTAGAAGGTGGGAAGTGATGTTGATGATCTCAATCTGCTTCAGAGTATGTTTAGTTGTATAACCAGCATTAGTGGTAAACACATGTACTTGCAAGGATAAAGTTTTGTGATTTCTTTACATTTGTGCTTCTGCAGTTTGTAGCGATTCTATGGATATGGTGTTACCAGATTTTAGTTAACAATCAAAATACATAGCACTCTGATCTTAGCTAAGAGTGAGTGACTGTTGCTTTTGGCAGTTTAAAAGCACTGTTTTGGGTTATATCATTATCAACAATGCTTCTAAAATCCTGATAGTGCTTTTGATATTTTTAAATGTATTTTTATGCCATC

mRNA sequence

ATGGAGGATGAGAGAGAGGCTGAGGATGCTATCCATGCACTCGATCGGAGAGAATTTGGCCGAAAGGGCCGCAGACTACGTGTTGAGTGGACCAAACAAGAGCGTGGCATTAGAAGACCTAGTGGAGGTGGAGGTGGAAGTGGAAGTGGAGGCGGTTCGAGGAGATCCTCTACTAACACAAGACCTTCAAAAACTTTATTTGTCATTAACTTTGATCCATATCATACAAGGATAAGAGATTTGGAGAGGCACTTCGATCCGTATGGTAAGATATTGAATGTCAGGATTCGAAGGAATTTTGCATTTGTCCAGTATGAACTGCAGGAGGATGCCACTAGAGCATTGGAGGTTACAAACATGAGCAAATTGATGGATCGAGTGATTTCTGTGGAATATGCTGTTCGGGATGATGATGAGAAAAGAAATGGATATAGTCCAGATAGGAATCGTGATAGGTCTCCTGATAGAAAACGACGATCCCCAAGTCCTTATAGAAGGGAGCGAGGAAGCCCCGATTATGGCAATGGTATTAGCCGCAGTCCATATAGGAGGCAAAGGGCTAGTCCTGATTATGGAAGTCGCCGTAGTCCGAGTCCTTATCAGAGAGAGAGGGAGAGAGGATCTCCCGATTATAGCCGTGGTCGTAGTCCCAAGCATAGTCCTTATAGGAGGGAGAGAGAGAGATCAAGTGACCATATTAGGGCTCCCAGCCACAGTCCTCCCCATCAGAGGGAAAGACCAAATGATGACCGAATCCCCAACCGAAGTCCTAGTCCCTACAGGAGAGAGAGGGAGAGGGGGAGTCCTATTGGTGGACGTGGCACAAGCTTTAGTCCTCGTGATAGAGAAAGGTTGAACCCGGACAACGGTCATGATCACCAGGAGAATACAGTAGCTGAACCTGGTGAGTGCCCCAGTTATAGTGGCACTCAGAGCCCAAAGCATCGGGGTTATAACAGCAGCCGTTCACCACAAGCAGAGGAATGA

Coding sequence (CDS)

ATGGAGGATGAGAGAGAGGCTGAGGATGCTATCCATGCACTCGATCGGAGAGAATTTGGCCGAAAGGGCCGCAGACTACGTGTTGAGTGGACCAAACAAGAGCGTGGCATTAGAAGACCTAGTGGAGGTGGAGGTGGAAGTGGAAGTGGAGGCGGTTCGAGGAGATCCTCTACTAACACAAGACCTTCAAAAACTTTATTTGTCATTAACTTTGATCCATATCATACAAGGATAAGAGATTTGGAGAGGCACTTCGATCCGTATGGTAAGATATTGAATGTCAGGATTCGAAGGAATTTTGCATTTGTCCAGTATGAACTGCAGGAGGATGCCACTAGAGCATTGGAGGTTACAAACATGAGCAAATTGATGGATCGAGTGATTTCTGTGGAATATGCTGTTCGGGATGATGATGAGAAAAGAAATGGATATAGTCCAGATAGGAATCGTGATAGGTCTCCTGATAGAAAACGACGATCCCCAAGTCCTTATAGAAGGGAGCGAGGAAGCCCCGATTATGGCAATGGTATTAGCCGCAGTCCATATAGGAGGCAAAGGGCTAGTCCTGATTATGGAAGTCGCCGTAGTCCGAGTCCTTATCAGAGAGAGAGGGAGAGAGGATCTCCCGATTATAGCCGTGGTCGTAGTCCCAAGCATAGTCCTTATAGGAGGGAGAGAGAGAGATCAAGTGACCATATTAGGGCTCCCAGCCACAGTCCTCCCCATCAGAGGGAAAGACCAAATGATGACCGAATCCCCAACCGAAGTCCTAGTCCCTACAGGAGAGAGAGGGAGAGGGGGAGTCCTATTGGTGGACGTGGCACAAGCTTTAGTCCTCGTGATAGAGAAAGGTTGAACCCGGACAACGGTCATGATCACCAGGAGAATACAGTAGCTGAACCTGGTGAGTGCCCCAGTTATAGTGGCACTCAGAGCCCAAAGCATCGGGGTTATAACAGCAGCCGTTCACCACAAGCAGAGGAATGA
Homology
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BLAST of CSPI03G04530 vs. Swiss-Prot
Match: RS40_ARATH (Serine/arginine-rich splicing factor RS40 OS=Arabidopsis thaliana GN=RS40 PE=1 SV=2)

HSP 1 Score: 389.8 bits (1000), Expect = 3.3e-107
Identity = 226/370 (61.08%), Postives = 269/370 (72.70%), Query Frame = 1 

Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDER+AEDAI ALDR EF
Sbjct: 1   MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIR 120
           GRKGRRLRVEWTK ERG        G   SGGGSRRSS++ RPSKTLFVINFD  +TR R
Sbjct: 61  GRKGRRLRVEWTKSERG--------GDKRSGGGSRRSSSSMRPSKTLFVINFDADNTRTR 120

Query: 121 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE 180
           DLE+HF+PYGKI+NVRIRRNFAF+QYE QEDATRAL+ +N SKLMD+VISVEYAV+DDD 
Sbjct: 121 DLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDA 180

Query: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISR-SPYRRQRASPDYGSRRSPS 240
           + NG+SP+R RDRSP+R+RRSPSPY+RERGSPDYG G S  + YR++R SPDYG RRSPS
Sbjct: 181 RGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPS 240

Query: 241 PYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPS 300
           PY++ R RGSP+Y R R    SP RRER  S       S SP ++RER + +  P +  S
Sbjct: 241 PYKKSR-RGSPEYGRDRRGNDSPRRRERVASPTKY---SRSPNNKRERMSPNHSPFKKES 300

Query: 301 PYRRERERGSPIGGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGY 360
           P     E  SPI         R+R R +P+NG      ++        Y G +SP  +  
Sbjct: 301 PRNGVGEVESPI-------ERRERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQKS- 350

Query: 361 NSSRSPQAEE 370
            S RSP A+E
Sbjct: 361 RSPRSPPADE 350

[Close]
BLAST of CSPI03G04530 vs. Swiss-Prot
Match: SRS41_ARATH (Serine/arginine-rich splicing factor RS41 OS=Arabidopsis thaliana GN=RS41 PE=1 SV=2)

HSP 1 Score: 383.6 bits (984), Expect = 2.4e-105
Identity = 226/377 (59.95%), Postives = 261/377 (69.23%), Query Frame = 1 

Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDER+AEDAI ALDR E+
Sbjct: 1   MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIR 120
           GR GRRLRVEWTK +R         GG+G  GGSRRSS+  RPSKTLFVINFD  +TR R
Sbjct: 61  GRTGRRLRVEWTKNDR---------GGAGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTR 120

Query: 121 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE 180
           DLERHF+PYGKI+NVRIRRNFAF+QYE QEDATRAL+ TN SKLMD+VISVEYAV+DDD 
Sbjct: 121 DLERHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDS 180

Query: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYG-SRRSPS 240
           + NGYSP+R RDRSPDR+RRSPSPYRRERGSPDYG G S   ++R+R SPDYG  RRSPS
Sbjct: 181 RGNGYSPERRRDRSPDRRRRSPSPYRRERGSPDYGRGASPVAHKRERTSPDYGRGRRSPS 240

Query: 241 PYQRERERGSPDYSRG-------RSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDR 300
           PY+R R   SPDY R         SP++   R    R     R  S SPP     P + R
Sbjct: 241 PYKRARL--SPDYKRDDRRRERVASPENGAVRNRSPRKG---RGESRSPP-----PYEKR 300

Query: 301 IPNRSPSPYRRERERGSPIGGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQ 360
             +RSP PY + RE  SP          R R + +P+NG       + E      Y G  
Sbjct: 301 RESRSPPPYEKRRESRSPPPYEKRRERSRSRSKSSPENGQVESPGQIMEVEAGRGYDGAD 356

Query: 361 SPKHRGYNSSRSPQAEE 370
           SP     + SRSP AEE
Sbjct: 361 SPIRE--SPSRSPPAEE 356

[Close]
BLAST of CSPI03G04530 vs. Swiss-Prot
Match: SRS31_ARATH (Serine/arginine-rich splicing factor RS31 OS=Arabidopsis thaliana GN=RS31 PE=1 SV=2)

HSP 1 Score: 261.9 bits (668), Expect = 1.0e-68
Identity = 161/303 (53.14%), Postives = 197/303 (65.02%), Query Frame = 1 

Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           M+P+F GNFEY+ RQ DLERLF +YG+VDRVDMKSG+AF+Y EDER+AEDAI  LD   F
Sbjct: 1   MRPVFVGNFEYETRQSDLERLFDKYGRVDRVDMKSGYAFVYFEDERDAEDAIRKLDNFPF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIR 120
           G + RRL VEW K ERG  R            G  ++ +N +P+KTLFVINFDP  T+  
Sbjct: 61  GYEKRRLSVEWAKGERGRPR------------GDAKAPSNLKPTKTLFVINFDPIRTKEH 120

Query: 121 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE 180
           D+E+HF+PYGK+ NVRIRRNF+FVQ+E QEDAT+ALE T  SK++DRV+SVEYA++DDDE
Sbjct: 121 DIEKHFEPYGKVTNVRIRRNFSFVQFETQEDATKALEATQRSKILDRVVSVEYALKDDDE 180

Query: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSP 240
           +      DRN  RSP   RRS SP  R R SPDYG     SP + +R SPDYG  RSP  
Sbjct: 181 R-----DDRNGGRSP---RRSLSPVYRRRPSPDYGR--RPSPGQGRRPSPDYGRARSP-- 240

Query: 241 YQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP 300
            + +R +G   Y R RSP +        RSSD+ R  S         P  DR  +RSP P
Sbjct: 241 -EYDRYKGPAAYERRRSPDYG------RRSSDYGRQRS---------PGYDRYRSRSPVP 263

Query: 301 YRR 304
             R
Sbjct: 301 RGR 263

[Close]
BLAST of CSPI03G04530 vs. Swiss-Prot
Match: RS31A_ARATH (Serine/arginine-rich splicing factor RS31A OS=Arabidopsis thaliana GN=RS31A PE=2 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 4.2e-62
Identity = 143/288 (49.65%), Postives = 185/288 (64.24%), Query Frame = 1 

Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           M+ ++ GNF+YD R  DLERLFS++G+V RVDMKSG+AF+Y EDER+AEDAI   D   F
Sbjct: 1   MRHVYVGNFDYDTRHSDLERLFSKFGRVKRVDMKSGYAFVYFEDERDAEDAIRRTDNTTF 60

Query: 61  GRKGRRLRVEWTKQERGIR-RPSGGGGGSGSGGGSRRSSTNTRPSKTLFVINFDPYHTRI 120
           G   R+L VEW K  +G R +P  G           ++ +N RP+KTLFVINFDP  TR 
Sbjct: 61  GYGRRKLSVEWAKDFQGERGKPRDG-----------KAVSNQRPTKTLFVINFDPIRTRE 120

Query: 121 RDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDD 180
           RD+ERHF+PYGK+LNVR+RRNFAFVQ+  QEDAT+AL+ T+ SKL+D+V+SVEYA+R+  
Sbjct: 121 RDMERHFEPYGKVLNVRMRRNFAFVQFATQEDATKALDSTHNSKLLDKVVSVEYALREAG 180

Query: 181 EKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPS 240
           E+ + Y        +  R+RRSPSP  R R SPDY           +R SP+Y   + P+
Sbjct: 181 EREDRY--------AGSRRRRSPSPVYRRRPSPDY----------TRRRSPEYDRYKGPA 240

Query: 241 PYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRER 288
           PY+R   R SPDY R              RSSD+ RA + SP + R R
Sbjct: 241 PYER---RKSPDYGR--------------RSSDYGRARARSPGYDRSR 242

[Close]
BLAST of CSPI03G04530 vs. Swiss-Prot
Match: SRS1A_DANRE (Serine/arginine-rich splicing factor 1A OS=Danio rerio GN=srsf1a PE=2 SV=2)

HSP 1 Score: 86.3 bits (212), Expect = 7.8e-16
Identity = 82/243 (33.74%), Postives = 118/243 (48.56%), Query Frame = 1 

Query: 4   IFCGNFEYDARQPDLERLFSRYGKVDRVDMKSG-----FAFIYMEDEREAEDAIHALDRR 63
           I+ GN   D R  D+E +F +YG +  +D+K+      FAF+  ED R+AEDA++A D  
Sbjct: 17  IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYARDGY 76

Query: 64  EFGRKGRRLRVEWTKQERGIRR------PSGGGGGSGSGGGSRRS--STNTRPSKTLFVI 123
           ++   G RLRVE+ +  RG+ R        GGGGG G GGG+ R      +R S+   ++
Sbjct: 77  DY--DGYRLRVEFPRSGRGMGRGGFGGGGGGGGGGGGGGGGAPRGRYGPPSRRSEYRVIV 136

Query: 124 NFDPYHTRIRDLERHFDPYGKILNVRI-RRNFAFVQYELQEDATRALEVTNMSKLMDRVI 183
           +  P     +DL+ H    G +    + R     V++  +ED T A+   + +K      
Sbjct: 137 SGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEG 196

Query: 184 SVEY-AVRDDDEKRNGYSPDRNRDRSPDRKR-------RSPSPYRRERGSPDYGNGISRS 225
              Y  V+ D  +   Y   R+R RS  R R       RS SP RR RGSP Y    SRS
Sbjct: 197 ETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSRSNNRSRSYSP-RRSRGSPQYSPRHSRS 256

[Close]
BLAST of CSPI03G04530 vs. TrEMBL
Match: A0A0A0L7I3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G063660 PE=4 SV=1)

HSP 1 Score: 712.2 bits (1837), Expect = 3.2e-202
Identity = 365/369 (98.92%), Postives = 366/369 (99.19%), Query Frame = 1 

Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIR 120
           GRKGRRLRVEWTKQERGIRRPSGGGGGSG  GGSRRSSTNTRPSKTLFVINFDPYHTRIR
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSG--GGSRRSSTNTRPSKTLFVINFDPYHTRIR 120

Query: 121 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE 180
           DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE
Sbjct: 121 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE 180

Query: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSP 240
           KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSP
Sbjct: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSP 240

Query: 241 YQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP 300
           YQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP
Sbjct: 241 YQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP 300

Query: 301 YRRERERGSPIGGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYN 360
           YRRERERGSPIGGRG S+SPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYN
Sbjct: 301 YRRERERGSPIGGRGRSYSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYN 360

Query: 361 SSRSPQAEE 370
           SSRSPQAEE
Sbjct: 361 SSRSPQAEE 367

[Close]
BLAST of CSPI03G04530 vs. TrEMBL
Match: A0A0A0L2A0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G063650 PE=4 SV=1)

HSP 1 Score: 635.2 bits (1637), Expect = 5.0e-179
Identity = 335/378 (88.62%), Postives = 346/378 (91.53%), Query Frame = 1 

Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDER+AEDAI ALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPS----GGGGGSGSGGGSRRSSTNTRPSKTLFVINFDPYH 120
           GRKGRRLRVEWTKQERGIRRP     GGGGG G GGGSRRSSTNTRPSKTLFVINFDPYH
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPGPGGGGGGGGGGGGGGSRRSSTNTRPSKTLFVINFDPYH 120

Query: 121 TRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVR 180
           TR RDLERHFDPYGKIL+VRIRRNFAFVQYELQEDATRALE+TNMSKLMDRVISVEYAVR
Sbjct: 121 TRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVR 180

Query: 181 DDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRR 240
           DDD+KRNGYSPDRNRDRSPDRKRRS SPYRRERGSPDYGNGISRSPYRRQRASPDYGSRR
Sbjct: 181 DDDDKRNGYSPDRNRDRSPDRKRRSSSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRR 240

Query: 241 SPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNR 300
           SPSPYQRERERGSPDY RGRSP HSPYRRERERSSDH+R PSH P HQRERPNDDR+PNR
Sbjct: 241 SPSPYQRERERGSPDYGRGRSPNHSPYRRERERSSDHVRTPSHRPSHQRERPNDDRVPNR 300

Query: 301 SPSPYRRERERGSPIGGRGTSFSPRDRER-LNPDNGHDH----QENTVAEPGECPSYSGT 360
           SPSPY R RE+GSP  GRGTS+SPRDRER  NPDNGHDH    Q+ T+ EPGE P+Y GT
Sbjct: 301 SPSPYGRGREKGSP-DGRGTSYSPRDRERSSNPDNGHDHGHDQQQTTIPEPGESPNYGGT 360

Query: 361 QSPKHRGYNSSRSPQAEE 370
           QSPK RGY  SRSPQAEE
Sbjct: 361 QSPKRRGY-GSRSPQAEE 376

[Close]
BLAST of CSPI03G04530 vs. TrEMBL
Match: V4S432_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005021mg PE=4 SV=1)

HSP 1 Score: 463.8 bits (1192), Expect = 2.0e-127
Identity = 264/386 (68.39%), Postives = 296/386 (76.68%), Query Frame = 1 

Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           M+PIFCGNFEYDARQ DLERLF RYGKVDRVDMKSGFAFIYM+DER+AEDAI  LDR EF
Sbjct: 55  MRPIFCGNFEYDARQSDLERLFRRYGKVDRVDMKSGFAFIYMDDERDAEDAIRGLDRTEF 114

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIR 120
           GRKGRRLRVEWTK ERGIRRP GG         +RR STNTRPSKTLFVINFDPYHTR R
Sbjct: 115 GRKGRRLRVEWTKHERGIRRPGGGSS-------ARRPSTNTRPSKTLFVINFDPYHTRTR 174

Query: 121 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE 180
           DLERHF+PYGKI++VRIRRNFAFVQYE+QEDATRAL+ TNMSKL DRVISVEYAVRDDD+
Sbjct: 175 DLERHFEPYGKIISVRIRRNFAFVQYEVQEDATRALDATNMSKLTDRVISVEYAVRDDDD 234

Query: 181 KRNGYSPDRNRDRSPDR-KRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPS 240
           +RNG+SPDRNRDRSPDR +RRSPSPYRRERGSPDYG G SRSPYRR+R SPDYG  RSPS
Sbjct: 235 RRNGHSPDRNRDRSPDRGRRRSPSPYRRERGSPDYGRGSSRSPYRRERGSPDYGRVRSPS 294

Query: 241 PYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPS 300
           PY+  R+RGSPDY  GR+   SPY++ER  +  H R PS S P++R+R + +     SPS
Sbjct: 295 PYR--RDRGSPDY--GRNSSRSPYKKER-AAIGHGRGPSRS-PYRRDRGSPENGHGSSPS 354

Query: 301 PYRR----------------ERERGSPIGGRGTSFSPRDRERLNPDNGHDHQENTVAEPG 360
           PYR+                ERER SP  GRG S SP  RER +PDNG     N++ EP 
Sbjct: 355 PYRKGKPSPNNGRGPSRSPYERERPSPENGRGGSRSPYRRERPSPDNGRVPSPNSMPEPR 414

Query: 361 ECPSYSGTQSPKHRGYNSSRSPQAEE 370
           + P Y G  SP +  Y  SRSP AE+
Sbjct: 415 DSPGYDGADSPINERYR-SRSPPAED 426

[Close]
BLAST of CSPI03G04530 vs. TrEMBL
Match: V4RLK3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005021mg PE=4 SV=1)

HSP 1 Score: 463.8 bits (1192), Expect = 2.0e-127
Identity = 264/386 (68.39%), Postives = 296/386 (76.68%), Query Frame = 1 

Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           M+PIFCGNFEYDARQ DLERLF RYGKVDRVDMKSGFAFIYM+DER+AEDAI  LDR EF
Sbjct: 54  MRPIFCGNFEYDARQSDLERLFRRYGKVDRVDMKSGFAFIYMDDERDAEDAIRGLDRTEF 113

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIR 120
           GRKGRRLRVEWTK ERGIRRP GG         +RR STNTRPSKTLFVINFDPYHTR R
Sbjct: 114 GRKGRRLRVEWTKHERGIRRPGGGSS-------ARRPSTNTRPSKTLFVINFDPYHTRTR 173

Query: 121 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE 180
           DLERHF+PYGKI++VRIRRNFAFVQYE+QEDATRAL+ TNMSKL DRVISVEYAVRDDD+
Sbjct: 174 DLERHFEPYGKIISVRIRRNFAFVQYEVQEDATRALDATNMSKLTDRVISVEYAVRDDDD 233

Query: 181 KRNGYSPDRNRDRSPDR-KRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPS 240
           +RNG+SPDRNRDRSPDR +RRSPSPYRRERGSPDYG G SRSPYRR+R SPDYG  RSPS
Sbjct: 234 RRNGHSPDRNRDRSPDRGRRRSPSPYRRERGSPDYGRGSSRSPYRRERGSPDYGRVRSPS 293

Query: 241 PYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPS 300
           PY+  R+RGSPDY  GR+   SPY++ER  +  H R PS S P++R+R + +     SPS
Sbjct: 294 PYR--RDRGSPDY--GRNSSRSPYKKER-AAIGHGRGPSRS-PYRRDRGSPENGHGSSPS 353

Query: 301 PYRR----------------ERERGSPIGGRGTSFSPRDRERLNPDNGHDHQENTVAEPG 360
           PYR+                ERER SP  GRG S SP  RER +PDNG     N++ EP 
Sbjct: 354 PYRKGKPSPNNGRGPSRSPYERERPSPENGRGGSRSPYRRERPSPDNGRVPSPNSMPEPR 413

Query: 361 ECPSYSGTQSPKHRGYNSSRSPQAEE 370
           + P Y G  SP +  Y  SRSP AE+
Sbjct: 414 DSPGYDGADSPINERYR-SRSPPAED 425

[Close]
BLAST of CSPI03G04530 vs. TrEMBL
Match: A0A067FA64_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g014331mg PE=4 SV=1)

HSP 1 Score: 463.8 bits (1192), Expect = 2.0e-127
Identity = 264/386 (68.39%), Postives = 296/386 (76.68%), Query Frame = 1 

Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           M+PIFCGNFEYDARQ DLERLF RYGKVDRVDMKSGFAFIYM+DER+AEDAI  LDR EF
Sbjct: 54  MRPIFCGNFEYDARQSDLERLFRRYGKVDRVDMKSGFAFIYMDDERDAEDAIRGLDRTEF 113

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIR 120
           GRKGRRLRVEWTK ERGIRRP GG         +RR STNTRPSKTLFVINFDPYHTR R
Sbjct: 114 GRKGRRLRVEWTKHERGIRRPGGGSS-------ARRPSTNTRPSKTLFVINFDPYHTRTR 173

Query: 121 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE 180
           DLERHF+PYGKI++VRIRRNFAFVQYE+QEDATRAL+ TNMSKL DRVISVEYAVRDDD+
Sbjct: 174 DLERHFEPYGKIISVRIRRNFAFVQYEVQEDATRALDATNMSKLTDRVISVEYAVRDDDD 233

Query: 181 KRNGYSPDRNRDRSPDR-KRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPS 240
           +RNG+SPDRNRDRSPDR +RRSPSPYRRERGSPDYG G SRSPYRR+R SPDYG  RSPS
Sbjct: 234 RRNGHSPDRNRDRSPDRGRRRSPSPYRRERGSPDYGRGSSRSPYRRERGSPDYGRVRSPS 293

Query: 241 PYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPS 300
           PY+  R+RGSPDY  GR+   SPY++ER  +  H R PS S P++R+R + +     SPS
Sbjct: 294 PYR--RDRGSPDY--GRNSSRSPYKKER-AAIGHGRGPSRS-PYRRDRGSPENGHGSSPS 353

Query: 301 PYRR----------------ERERGSPIGGRGTSFSPRDRERLNPDNGHDHQENTVAEPG 360
           PYR+                ERER SP  GRG S SP  RER +PDNG     N++ EP 
Sbjct: 354 PYRKGKPSPNNGRGPSRSPYERERPSPENGRGGSRSPYRRERPSPDNGRVPSPNSMPEPR 413

Query: 361 ECPSYSGTQSPKHRGYNSSRSPQAEE 370
           + P Y G  SP +  Y  SRSP AE+
Sbjct: 414 DSPGYDGADSPINERYR-SRSPPAED 425

[Close]
BLAST of CSPI03G04530 vs. TAIR10
Match: AT4G25500.1 (AT4G25500.1 arginine/serine-rich splicing factor 35)

HSP 1 Score: 389.8 bits (1000), Expect = 1.9e-108
Identity = 226/370 (61.08%), Postives = 269/370 (72.70%), Query Frame = 1 

Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDER+AEDAI ALDR EF
Sbjct: 1   MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIR 120
           GRKGRRLRVEWTK ERG        G   SGGGSRRSS++ RPSKTLFVINFD  +TR R
Sbjct: 61  GRKGRRLRVEWTKSERG--------GDKRSGGGSRRSSSSMRPSKTLFVINFDADNTRTR 120

Query: 121 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE 180
           DLE+HF+PYGKI+NVRIRRNFAF+QYE QEDATRAL+ +N SKLMD+VISVEYAV+DDD 
Sbjct: 121 DLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDA 180

Query: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISR-SPYRRQRASPDYGSRRSPS 240
           + NG+SP+R RDRSP+R+RRSPSPY+RERGSPDYG G S  + YR++R SPDYG RRSPS
Sbjct: 181 RGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPS 240

Query: 241 PYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPS 300
           PY++ R RGSP+Y R R    SP RRER  S       S SP ++RER + +  P +  S
Sbjct: 241 PYKKSR-RGSPEYGRDRRGNDSPRRRERVASPTKY---SRSPNNKRERMSPNHSPFKKES 300

Query: 301 PYRRERERGSPIGGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGY 360
           P     E  SPI         R+R R +P+NG      ++        Y G +SP  +  
Sbjct: 301 PRNGVGEVESPI-------ERRERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQKS- 350

Query: 361 NSSRSPQAEE 370
            S RSP A+E
Sbjct: 361 RSPRSPPADE 350

[Close]
BLAST of CSPI03G04530 vs. TAIR10
Match: AT5G52040.2 (AT5G52040.2 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 384.4 bits (986), Expect = 7.8e-107
Identity = 227/377 (60.21%), Postives = 262/377 (69.50%), Query Frame = 1 

Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDER+AEDAI ALDR E+
Sbjct: 1   MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIR 120
           GR GRRLRVEWTK +RG         G+G  GGSRRSS+  RPSKTLFVINFD  +TR R
Sbjct: 61  GRTGRRLRVEWTKNDRG---------GAGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTR 120

Query: 121 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE 180
           DLERHF+PYGKI+NVRIRRNFAF+QYE QEDATRAL+ TN SKLMD+VISVEYAV+DDD 
Sbjct: 121 DLERHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDS 180

Query: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYG-SRRSPS 240
           + NGYSP+R RDRSPDR+RRSPSPYRRERGSPDYG G S   ++R+R SPDYG  RRSPS
Sbjct: 181 RGNGYSPERRRDRSPDRRRRSPSPYRRERGSPDYGRGASPVAHKRERTSPDYGRGRRSPS 240

Query: 241 PYQRERERGSPDYSRG-------RSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDR 300
           PY+R R   SPDY R         SP++   R    R     R  S SPP     P + R
Sbjct: 241 PYKRARL--SPDYKRDDRRRERVASPENGAVRNRSPRKG---RGESRSPP-----PYEKR 300

Query: 301 IPNRSPSPYRRERERGSPIGGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQ 360
             +RSP PY + RE  SP          R R + +P+NG       + E      Y G  
Sbjct: 301 RESRSPPPYEKRRESRSPPPYEKRRERSRSRSKSSPENGQVESPGQIMEVEAGRGYDGAD 357

Query: 361 SPKHRGYNSSRSPQAEE 370
           SP  R  + SRSP AEE
Sbjct: 361 SP-IRESSPSRSPPAEE 357

[Close]
BLAST of CSPI03G04530 vs. TAIR10
Match: AT3G61860.1 (AT3G61860.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 261.9 bits (668), Expect = 5.9e-70
Identity = 161/303 (53.14%), Postives = 197/303 (65.02%), Query Frame = 1 

Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           M+P+F GNFEY+ RQ DLERLF +YG+VDRVDMKSG+AF+Y EDER+AEDAI  LD   F
Sbjct: 1   MRPVFVGNFEYETRQSDLERLFDKYGRVDRVDMKSGYAFVYFEDERDAEDAIRKLDNFPF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIR 120
           G + RRL VEW K ERG  R            G  ++ +N +P+KTLFVINFDP  T+  
Sbjct: 61  GYEKRRLSVEWAKGERGRPR------------GDAKAPSNLKPTKTLFVINFDPIRTKEH 120

Query: 121 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE 180
           D+E+HF+PYGK+ NVRIRRNF+FVQ+E QEDAT+ALE T  SK++DRV+SVEYA++DDDE
Sbjct: 121 DIEKHFEPYGKVTNVRIRRNFSFVQFETQEDATKALEATQRSKILDRVVSVEYALKDDDE 180

Query: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSP 240
           +      DRN  RSP   RRS SP  R R SPDYG     SP + +R SPDYG  RSP  
Sbjct: 181 R-----DDRNGGRSP---RRSLSPVYRRRPSPDYGR--RPSPGQGRRPSPDYGRARSP-- 240

Query: 241 YQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP 300
            + +R +G   Y R RSP +        RSSD+ R  S         P  DR  +RSP P
Sbjct: 241 -EYDRYKGPAAYERRRSPDYG------RRSSDYGRQRS---------PGYDRYRSRSPVP 263

Query: 301 YRR 304
             R
Sbjct: 301 RGR 263

[Close]
BLAST of CSPI03G04530 vs. TAIR10
Match: AT2G46610.1 (AT2G46610.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 240.0 bits (611), Expect = 2.4e-63
Identity = 143/288 (49.65%), Postives = 185/288 (64.24%), Query Frame = 1 

Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           M+ ++ GNF+YD R  DLERLFS++G+V RVDMKSG+AF+Y EDER+AEDAI   D   F
Sbjct: 1   MRHVYVGNFDYDTRHSDLERLFSKFGRVKRVDMKSGYAFVYFEDERDAEDAIRRTDNTTF 60

Query: 61  GRKGRRLRVEWTKQERGIR-RPSGGGGGSGSGGGSRRSSTNTRPSKTLFVINFDPYHTRI 120
           G   R+L VEW K  +G R +P  G           ++ +N RP+KTLFVINFDP  TR 
Sbjct: 61  GYGRRKLSVEWAKDFQGERGKPRDG-----------KAVSNQRPTKTLFVINFDPIRTRE 120

Query: 121 RDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDD 180
           RD+ERHF+PYGK+LNVR+RRNFAFVQ+  QEDAT+AL+ T+ SKL+D+V+SVEYA+R+  
Sbjct: 121 RDMERHFEPYGKVLNVRMRRNFAFVQFATQEDATKALDSTHNSKLLDKVVSVEYALREAG 180

Query: 181 EKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPS 240
           E+ + Y        +  R+RRSPSP  R R SPDY           +R SP+Y   + P+
Sbjct: 181 EREDRY--------AGSRRRRSPSPVYRRRPSPDY----------TRRRSPEYDRYKGPA 240

Query: 241 PYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRER 288
           PY+R   R SPDY R              RSSD+ RA + SP + R R
Sbjct: 241 PYER---RKSPDYGR--------------RSSDYGRARARSPGYDRSR 242

[Close]
BLAST of CSPI03G04530 vs. TAIR10
Match: AT1G02840.1 (AT1G02840.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 82.0 bits (201), Expect = 8.3e-16
Identity = 95/302 (31.46%), Postives = 137/302 (45.36%), Query Frame = 1 

Query: 2   KPIFCGNFEYDARQPDLERLFSRYGKVDRVDMK-----SGFAFIYMEDEREAEDAIHALD 61
           + ++ GN   D R+ ++E LFS+YG V ++D+K      G+AF+  +D R+AEDAIH  D
Sbjct: 7   RTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRD 66

Query: 62  RREFGRKGRRLRVEWTKQERGIRRPS--------GGGGGSGSGGGSRRSSTNTRPSKTLF 121
             +F   G RLRVE      G RR S        GGG G G G G   S   +R S+   
Sbjct: 67  GYDF--DGHRLRVELA---HGGRRSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEFRV 126

Query: 122 VINFDPYHTRIRDLERHFDPYGKILNVRIRRN----FAFVQYELQEDATRALEVTNMSKL 181
           ++   P     +DL+ H    G +   ++ R+       V Y   ED   AL+  + ++ 
Sbjct: 127 LVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTEF 186

Query: 182 MDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSP-Y 241
            +   +    VR+ D +++  SP R R  S  R R       R R         SRSP  
Sbjct: 187 RNAFSNGYVRVREYDSRKDSRSPSRGRSYSKSRSRSRGRSVSRSRSR---SRSRSRSPKA 246

Query: 242 RRQRASPDYGSRRSPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPH 286
           +  R SP   + RSP P  + R   SP  SR RS    P  ++    S    +P+ SP H
Sbjct: 247 KSSRRSPAKSTSRSPGPRSKSRS-PSPRRSRSRSRSPLPSVQKEGSKSPSKPSPAKSPIH 299

[Close]
BLAST of CSPI03G04530 vs. NCBI nr
Match: gi|778675939|ref|XP_011650502.1| (PREDICTED: serine/arginine-rich splicing factor RS40-like isoform X1 [Cucumis sativus])

HSP 1 Score: 712.2 bits (1837), Expect = 4.6e-202
Identity = 365/369 (98.92%), Postives = 366/369 (99.19%), Query Frame = 1 

Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIR 120
           GRKGRRLRVEWTKQERGIRRPSGGGGGSG  GGSRRSSTNTRPSKTLFVINFDPYHTRIR
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSG--GGSRRSSTNTRPSKTLFVINFDPYHTRIR 120

Query: 121 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE 180
           DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE
Sbjct: 121 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE 180

Query: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSP 240
           KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSP
Sbjct: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSP 240

Query: 241 YQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP 300
           YQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP
Sbjct: 241 YQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP 300

Query: 301 YRRERERGSPIGGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYN 360
           YRRERERGSPIGGRG S+SPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYN
Sbjct: 301 YRRERERGSPIGGRGRSYSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYN 360

Query: 361 SSRSPQAEE 370
           SSRSPQAEE
Sbjct: 361 SSRSPQAEE 367

[Close]
BLAST of CSPI03G04530 vs. NCBI nr
Match: gi|778675942|ref|XP_011650503.1| (PREDICTED: serine/arginine-rich splicing factor RS40-like isoform X2 [Cucumis sativus])

HSP 1 Score: 706.1 bits (1821), Expect = 3.3e-200
Identity = 364/369 (98.64%), Postives = 365/369 (98.92%), Query Frame = 1 

Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIR 120
           GRKGRRLRVEWTKQERGIRRPSGGGGGSG  GGSRRSSTNTRPSKTLFVINFDPYHTRIR
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSG--GGSRRSSTNTRPSKTLFVINFDPYHTRIR 120

Query: 121 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE 180
           DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE
Sbjct: 121 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE 180

Query: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSP 240
           KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSP
Sbjct: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSP 240

Query: 241 YQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP 300
           YQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP
Sbjct: 241 YQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP 300

Query: 301 YRRERERGSPIGGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYN 360
           YRRERERGSPIGGRG S+SPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYN
Sbjct: 301 YRRERERGSPIGGRGRSYSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYN 360

Query: 361 SSRSPQAEE 370
            SRSPQAEE
Sbjct: 361 -SRSPQAEE 366

[Close]
BLAST of CSPI03G04530 vs. NCBI nr
Match: gi|659096439|ref|XP_008449096.1| (PREDICTED: arginine/serine-rich-splicing factor RSP40-like isoform X1 [Cucumis melo])

HSP 1 Score: 685.6 bits (1768), Expect = 4.7e-194
Identity = 356/370 (96.22%), Postives = 358/370 (96.76%), Query Frame = 1 

Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIR 120
           GRKGRRLRVEWTKQERGIRRPSGGGGGSG  GGSRRSS+NTRPSKTLFVINFDPYHTRIR
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSG--GGSRRSSSNTRPSKTLFVINFDPYHTRIR 120

Query: 121 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE 180
           DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE
Sbjct: 121 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE 180

Query: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSP 240
           KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQR SPDYGSRRSPSP
Sbjct: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRTSPDYGSRRSPSP 240

Query: 241 YQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP 300
           YQRERERGSPDY RGRSPKHSPYRRERERSSDH RAPS SP HQRERPN DRIPNRSPSP
Sbjct: 241 YQRERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSRSPLHQRERPNGDRIPNRSPSP 300

Query: 301 YRRERERGSPI-GGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGY 360
           YRRERER SPI  GRGTS+SPRDRER NPDNGHDHQENTVAEPGECPSYSGTQSPKHRGY
Sbjct: 301 YRRERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGY 360

Query: 361 NSSRSPQAEE 370
           NSSRSPQAEE
Sbjct: 361 NSSRSPQAEE 368

[Close]
BLAST of CSPI03G04530 vs. NCBI nr
Match: gi|659096441|ref|XP_008449098.1| (PREDICTED: arginine/serine-rich-splicing factor RSP40-like isoform X2 [Cucumis melo])

HSP 1 Score: 679.5 bits (1752), Expect = 3.3e-192
Identity = 355/370 (95.95%), Postives = 357/370 (96.49%), Query Frame = 1 

Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIR 120
           GRKGRRLRVEWTKQERGIRRPSGGGGGSG  GGSRRSS+NTRPSKTLFVINFDPYHTRIR
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSG--GGSRRSSSNTRPSKTLFVINFDPYHTRIR 120

Query: 121 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE 180
           DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE
Sbjct: 121 DLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDE 180

Query: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSP 240
           KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQR SPDYGSRRSPSP
Sbjct: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRTSPDYGSRRSPSP 240

Query: 241 YQRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSP 300
           YQRERERGSPDY RGRSPKHSPYRRERERSSDH RAPS SP HQRERPN DRIPNRSPSP
Sbjct: 241 YQRERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSRSPLHQRERPNGDRIPNRSPSP 300

Query: 301 YRRERERGSPI-GGRGTSFSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGY 360
           YRRERER SPI  GRGTS+SPRDRER NPDNGHDHQENTVAEPGECPSYSGTQSPKHRGY
Sbjct: 301 YRRERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGY 360

Query: 361 NSSRSPQAEE 370
           N SRSPQAEE
Sbjct: 361 N-SRSPQAEE 367

[Close]
BLAST of CSPI03G04530 vs. NCBI nr
Match: gi|659096445|ref|XP_008449100.1| (PREDICTED: arginine/serine-rich-splicing factor RSP40-like isoform X1 [Cucumis melo])

HSP 1 Score: 642.5 bits (1656), Expect = 4.5e-181
Identity = 339/379 (89.45%), Postives = 350/379 (92.35%), Query Frame = 1 

Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDER+AEDAI ALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGSG----GGSRRSSTNTRPSKTLFVINFDPYH 120
           GRKGRRLRVEWTKQERGIRRP GGGGG G G    GGSRRSSTNTRPSKTLFVINFDPYH
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGGGGGGGGGGGSRRSSTNTRPSKTLFVINFDPYH 120

Query: 121 TRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVR 180
           TR RDLERHFDPYGKIL+VRIRRNFAFVQYELQEDATRALE+TNMSKLMDRVISVEYAVR
Sbjct: 121 TRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVR 180

Query: 181 DDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRR 240
           DDD+KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRR
Sbjct: 181 DDDDKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRR 240

Query: 241 SPSPYQRERERGSPDYSRGRSPKHSPYRRERERSSDHIR-APSHSPPHQRERPNDDRIPN 300
           SPSPYQRERERGSPDY RGRSP HSPYRRERERSSDH+R APS+ P HQRERPNDDR+PN
Sbjct: 241 SPSPYQRERERGSPDYGRGRSPNHSPYRRERERSSDHVRGAPSNRPTHQRERPNDDRVPN 300

Query: 301 RSPSPYRRERERGSPIGGRGTSFSPRDRER-LNPDNGHDH----QENTVAEPGECPSYSG 360
           RSPSPY RERE+GSP  GRGTS+SPRDRER  NPDNGHDH    Q+N V EPGE P+Y  
Sbjct: 301 RSPSPYGREREKGSPTDGRGTSYSPRDRERSSNPDNGHDHGHDQQQNMVPEPGESPNYGD 360

Query: 361 TQSPKHRGYNSSRSPQAEE 370
           TQSPKHRGY SSRSPQAEE
Sbjct: 361 TQSPKHRGY-SSRSPQAEE 378

The following BLAST results are available for this feature:
BLAST of CSPI03G04530 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RS40_ARATH3.3e-10761.08Serine/arginine-rich splicing factor RS40 OS=Arabidopsis thaliana GN=RS40 PE=1 S... [more]
SRS41_ARATH2.4e-10559.95Serine/arginine-rich splicing factor RS41 OS=Arabidopsis thaliana GN=RS41 PE=1 S... [more]
SRS31_ARATH1.0e-6853.14Serine/arginine-rich splicing factor RS31 OS=Arabidopsis thaliana GN=RS31 PE=1 S... [more]
RS31A_ARATH4.2e-6249.65Serine/arginine-rich splicing factor RS31A OS=Arabidopsis thaliana GN=RS31A PE=2... [more]
SRS1A_DANRE7.8e-1633.74Serine/arginine-rich splicing factor 1A OS=Danio rerio GN=srsf1a PE=2 SV=2[more]
BLAST of CSPI03G04530 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7I3_CUCSA3.2e-20298.92Uncharacterized protein OS=Cucumis sativus GN=Csa_3G063660 PE=4 SV=1[more]
A0A0A0L2A0_CUCSA5.0e-17988.62Uncharacterized protein OS=Cucumis sativus GN=Csa_3G063650 PE=4 SV=1[more]
V4S432_9ROSI2.0e-12768.39Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005021mg PE=4 SV=1[more]
V4RLK3_9ROSI2.0e-12768.39Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005021mg PE=4 SV=1[more]
A0A067FA64_CITSI2.0e-12768.39Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g014331mg PE=4 SV=1[more]
BLAST of CSPI03G04530 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G25500.11.9e-10861.08 arginine/serine-rich splicing factor 35[more]
AT5G52040.27.8e-10760.21 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT3G61860.15.9e-7053.14 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT2G46610.12.4e-6349.65 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT1G02840.18.3e-1631.46 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
BLAST of CSPI03G04530 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778675939|ref|XP_011650502.1|4.6e-20298.92PREDICTED: serine/arginine-rich splicing factor RS40-like isoform X1 [Cucumis sa... [more]
gi|778675942|ref|XP_011650503.1|3.3e-20098.64PREDICTED: serine/arginine-rich splicing factor RS40-like isoform X2 [Cucumis sa... [more]
gi|659096439|ref|XP_008449096.1|4.7e-19496.22PREDICTED: arginine/serine-rich-splicing factor RSP40-like isoform X1 [Cucumis m... [more]
gi|659096441|ref|XP_008449098.1|3.3e-19295.95PREDICTED: arginine/serine-rich-splicing factor RSP40-like isoform X2 [Cucumis m... [more]
gi|659096445|ref|XP_008449100.1|4.5e-18189.45PREDICTED: arginine/serine-rich-splicing factor RSP40-like isoform X1 [Cucumis m... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G04530.3CSPI03G04530.3mRNA
CSPI03G04530.2CSPI03G04530.2mRNA
CSPI03G04530.1CSPI03G04530.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 66..128
score: 1.6
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 65..131
score: 1.6
IPR000504RNA recognition motif domainPROFILEPS50102RRMcoord: 64..135
score: 14
IPR012677Nucleotide-binding alpha-beta plait domainGENE3DG3DSA:3.30.70.330coord: 1..48
score: 7.8E-5coord: 50..141
score: 6.0
IPR012677Nucleotide-binding alpha-beta plait domainunknownSSF54928RNA-binding domain, RBDcoord: 1..57
score: 5.57E-7coord: 44..140
score: 1.34
NoneNo IPR availablePANTHERPTHR24012FAMILY NOT NAMEDcoord: 1..39
score: 8.7E-21coord: 56..139
score: 8.7

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI03G04530Cucumber (Gy14) v1cgycpiB015
CSPI03G04530Cucurbita maxima (Rimu)cmacpiB333
CSPI03G04530Cucurbita maxima (Rimu)cmacpiB832
CSPI03G04530Cucurbita moschata (Rifu)cmocpiB324
CSPI03G04530Cucurbita moschata (Rifu)cmocpiB819
CSPI03G04530Cucumber (Chinese Long) v2cpicuB120
CSPI03G04530Melon (DHL92) v3.5.1cpimeB240
CSPI03G04530Watermelon (Charleston Gray)cpiwcgB190
CSPI03G04530Watermelon (Charleston Gray)cpiwcgB218
CSPI03G04530Watermelon (97103) v1cpiwmB193
CSPI03G04530Cucurbita pepo (Zucchini)cpecpiB216
CSPI03G04530Bottle gourd (USVL1VR-Ls)cpilsiB197
CSPI03G04530Melon (DHL92) v3.6.1cpimedB225
CSPI03G04530Cucumber (Gy14) v2cgybcpiB110
CSPI03G04530Silver-seed gourdcarcpiB0524
CSPI03G04530Silver-seed gourdcarcpiB0620
CSPI03G04530Cucumber (Chinese Long) v3cpicucB144
CSPI03G04530Watermelon (97103) v2cpiwmbB184
CSPI03G04530Wax gourdcpiwgoB218