CSPI03G04030 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGATATGTGAGAGATCTGACTTAAGAGACAGTCTTCTTAAGCTGTCATCTGGATTCATGGACCTTGATTCTTCTCTGAAATCGATTGCATCAATTTCCTTTAATATCATAGTTTTGTGTTTGACCATGGAGTTCATTTTGTCAGTTTGCCAAGAATTAATGTTTTTTGTTAAAGCCTTGAGGCTCTAAATGAAAGCGAAACCTCGATGACCATCCTCTTTAGCATTATTCCACCACATATCTAGGTTTCTTTTAAAATCAGCTTCTTTTATAAAGTTGGTATTAAGCCTGAAGGGAGAAGGGCCCCATCTGATATCTGTCGATTCAAGGACTATAGAGTGGTGATCATAAATAATTCTGAAAAGCGATCTTGAAAAATTAAAGTTGAAAGCTCGATCTCAATAAGGGTTGAAAAGAAATCTATTGATCCGGGAGAGCACTGGATTAGTTCTGAGATTGGACCAAGTGAACTTGATGTTGGACAGAGGAGGGTCAATTAAGTTATTGAACTGTATGAAATTGTTGGAACTTTTTCATACTTAACTTAGACGAACTGATTGCAGTAGTTTCCTTCTTCCATCTTATGACAATTGAAATCTCCCCTCAAAAGCTAAAGAGAGTTATTTAGAGAATTAAGCTTGTGAAGGTTTTCCCAGAAAAGATCACGATTTCTTCTTCTTGCAGGGTCATAAATAGTAGTTAGCCACCAACTGATGCCTTTTGAAACTGCCTTAGCATAGGAGCGTCTTGGGGTGCTATCTAAGGTACCTTTTGGGGTGAATGAGGGTGTAGTTTTGGCTTCAACTTCAACTTTTGGCGTGATCGTTGAAAGAAAGGAAACTCAATCACTTTTGTCGATGCCCTCTGGGACAAGAATGCATGCCTTTCTTCCGACATAATCAACTCTATACATCTTCGTTGTGTAACCTTTTCTGTTTTTTGTTTTTCTGATCCAAAGACAGTGGTCTTCATTTCTTGTTTCCAGGAAGAACCGTATTATACTTGGAGTAGCAATCAGATTTTTGAGTGTGTTCCTAACCCATTCTAGTTCCGAGGTTACTTCCATAGAGAATGTCTTATGTGCTCCCACTTCAGTTAGCCAGTACAACATAGATTTTGAATATTTGTCTAGGAGAGAGGAGATATTCTTTTCTTTCTATTTTGCATGAACAAGGAAGATTCTTGAAGAACGCCATAATTGAGAGTTGTTGCAGGTCTAAAAGTAGTAACAGGTTGAAGAGAAAGGTGAGAAGAAGAAGTAGTGTGTGTACCTTTTAAAGCGGATGCATGGCGTTGTGTCATGATGAAAGTTCCGAGAGGGGGTATTACTATTGCGACGGATGGGATTCTTGGAGAGAGGAGAGGGAAGATATGGAGCGCATATATGGTTTGGACTAAGTTAAAATTTATGTCTCATGGTTTATAATTAAAATTAATCTCATTAGGTTTGGTAAAAACTTCATAACTAAGTACCTTATTGTATGGACTATTTAAGAGAATTTAACCAACCATAAGAAACTAAGTTATATGGAGTAGTATGAAATCATAGAAACTAAGACTTTGGTAGCATTATTATTATTATTATTAAATTAAGTCTATAGATACTAGTCCTACCTCTAAATTTCTTCATTTGTCGTCTTCTATTTACTTATTGTTTAAAAAATTAAACCATATTTTGACAACGAAAAAAAGTACTTTTAAAATTTTGATTTTTTTTTTTAATTTGGCTAAGAATTTAACTATCTATTTGAGAAAAATGTAAATCATTATAAGAAATGGGGAGGAAATCAACTTAAGTTTTTTTTTAAAAAAAACAAAATGATACTGAAACAAAAACTAAATTCTAAATTTTAAAATCACATTGACAAATTAACTTTATCCAACCATAGAGACCAAAATTTGAAATTTAACGGAATTTAACTTATAATAAATATTTTTAATTTAAAAATATTTGAATTTGATTAACAAATGCTTCTAAATATTTCTATCTTTATCTAATATAATTTTAAAATTCAAATTATGGATACAAATTAACTTAAGGTGACATTTTTTTGGATGTTGGCGGACGTTTTTTTCATGAGTAAAAGTGAACATTCTTATAGTGTTAGATGGTTAGTTTGGATTATAACATAATCTGGAAAAGAAAAAAAAAGCTTTCATTAAAGAGAACAAAATTTGGATTGTGAACCAAACATAACCGAGTTTTTTAAAATCGCAGGAGTGAGTTGAAGAATGCAGTGATTGAAGGAGGAGTTCCTTTTGACCGAGCTCATGGAGGAGTTCATGCATTTGAATACCCTAAGTTAGATCCCAGATTCAACCAAGTATTTAACATTGCAATGATAAATCACACTACAATGTCCATAAAGAAAATTGTGGAATCATACAAAGGTTTTGCAAACATCAAGCAATTAGTTGATGTTGGTGGTGGCCTTGGGGTCACCCTTCAAATCATCACTTCTACCTATCCTTCCATCAAAGGCATCAATTTCGACTTACCTCATGTCATCCGTGATGCCCCTGCTTATAATAGTAAGTAGTTCCAATCATTTAATTTGAAAAAGTTTACAAAGCTGAATTTTGATTATGAATTGGCAGGGGTTCAACATGTGGGAGGAGACATGTTTGAGAGTGTTCCAAATGGAGATGCTATTTTCATGAAGGTTAGTTTTCTTTTCATTTTCATAAACAAAAACATTCATAAACAATAGTTCCTATGCTAGAGACTATTTTTTTTAGGACTTTATCGAATTTTAGAGACTATTCATAAGATTTTATATATAAAAAAGAATCTAACTTTTAACTTTTGAATTTGTAATTTAACCAATAATAATTAACCTATAGTTGAGAGATATAGGCCACTCTGCCCTTTGAAAACTGTCAACATTTAAGATTGTACAATTAGTATTTTATGGACTAAGTCATACTTGAAATGACAAAATTCTTTTACTTTATTGTTATTATAGTGGATATTACATGATTGGAGCGACGATCATTGCACAAAGTTATTGAAAAATTGCTATAATGCAATTCCAGATGATGGAAAGATAATTATAGTAGACAGTGTGATTCCCACGGAGCCTGAAACCACAAATGTAACAAAGGCAACAGCCCAAGCTGATGTGCTTATGATGACTCAAAATCCAGGAGGAAAGGAAAGAACTAGAGATGAATTTAAGAGCCTAGCAACCAAAGCTGGGTTTAAACATGTCATATTCCAATGTTTTGTATCTAATCTTTGGGTTATAGAGTTTCTTAAAAATTAATTTATATATATTGTAATTGAATTTCTATGTTTCTATGTCCTTTTGGTTGCTAAACTTTCTGCACTCCAAAACGTTGAATAAAAAAGTTGTTATTGTTGTTATAA ATGATATGTGAGAGATCTGACTTAAGAGACAGTCTTCTTAAGCTGTCATCTGGATTCATGGACCTTGATTCTTCTCTGAAATCGATTGCATCAATTTCCTTTAATATCATAGTTTTGTGTTTGACCATGGAGTTCATTTTCTTCTTTTATAAAGTTGGTATTAAGCCTGAAGGGAGAAGGGCCCCATCTGATATCTGTCGATTCAAGGACTATAGAGTGAAATCTATTGATCCGGGAGAGCACTGGATTAGTTCTGAGATTGGACCAAGTGAACTTGATGTTGGACAGAGGAGGGAGCGTCTTGGGGTGCTATCTAAGGTACCTTTTGGGGTGAATGAGGGTGTAGTTTTGGCTTCAACTTCAACTTTTGGCGTGATCGTTGAAAGAAAGGAAACTCAATCACTTTTGAAGAACCGTATTATACTTGGAGTAGCAATCAGATTTTTGAGTGTGTTCCTAACCCATTCTAGTTCCGAGGTTACTTCCATAGAGAATGTCTTATGTGCTCCCACTTCAGTTAGCCAGAGTGAGTTGAAGAATGCAGTGATTGAAGGAGGAGTTCCTTTTGACCGAGCTCATGGAGGAGTTCATGCATTTGAATACCCTAAGTTAGATCCCAGATTCAACCAAGTATTTAACATTGCAATGATAAATCACACTACAATGTCCATAAAGAAAATTGTGGAATCATACAAAGGTTTTGCAAACATCAAGCAATTAGTTGATGTTGGTGGTGGCCTTGGGGTCACCCTTCAAATCATCACTTCTACCTATCCTTCCATCAAAGGCATCAATTTCGACTTACCTCATGTCATCCGTGATGCCCCTGCTTATAATAGGGTTCAACATGTGGGAGGAGACATGTTTGAGAGTGTTCCAAATGGAGATGCTATTTTCATGAAGTGGATATTACATGATTGGAGCGACGATCATTGCACAAAGTTATTGAAAAATTGCTATAATGCAATTCCAGATGATGGAAAGATAATTATAGTAGACAGTGTGATTCCCACGGAGCCTGAAACCACAAATGTAACAAAGGCAACAGCCCAAGCTGATGTGCTTATGATGACTCAAAATCCAGGAGGAAAGGAAAGAACTAGAGATGAATTTAAGAGCCTAGCAACCAAAGCTGGGTTTAAACATGTCATATTCCAATGTTTTGTATCTAATCTTTGGGTTATAGAGTTTCTTAAAAATTAA ATGATATGTGAGAGATCTGACTTAAGAGACAGTCTTCTTAAGCTGTCATCTGGATTCATGGACCTTGATTCTTCTCTGAAATCGATTGCATCAATTTCCTTTAATATCATAGTTTTGTGTTTGACCATGGAGTTCATTTTCTTCTTTTATAAAGTTGGTATTAAGCCTGAAGGGAGAAGGGCCCCATCTGATATCTGTCGATTCAAGGACTATAGAGTGAAATCTATTGATCCGGGAGAGCACTGGATTAGTTCTGAGATTGGACCAAGTGAACTTGATGTTGGACAGAGGAGGGAGCGTCTTGGGGTGCTATCTAAGGTACCTTTTGGGGTGAATGAGGGTGTAGTTTTGGCTTCAACTTCAACTTTTGGCGTGATCGTTGAAAGAAAGGAAACTCAATCACTTTTGAAGAACCGTATTATACTTGGAGTAGCAATCAGATTTTTGAGTGTGTTCCTAACCCATTCTAGTTCCGAGGTTACTTCCATAGAGAATGTCTTATGTGCTCCCACTTCAGTTAGCCAGAGTGAGTTGAAGAATGCAGTGATTGAAGGAGGAGTTCCTTTTGACCGAGCTCATGGAGGAGTTCATGCATTTGAATACCCTAAGTTAGATCCCAGATTCAACCAAGTATTTAACATTGCAATGATAAATCACACTACAATGTCCATAAAGAAAATTGTGGAATCATACAAAGGTTTTGCAAACATCAAGCAATTAGTTGATGTTGGTGGTGGCCTTGGGGTCACCCTTCAAATCATCACTTCTACCTATCCTTCCATCAAAGGCATCAATTTCGACTTACCTCATGTCATCCGTGATGCCCCTGCTTATAATAGGGTTCAACATGTGGGAGGAGACATGTTTGAGAGTGTTCCAAATGGAGATGCTATTTTCATGAAGTGGATATTACATGATTGGAGCGACGATCATTGCACAAAGTTATTGAAAAATTGCTATAATGCAATTCCAGATGATGGAAAGATAATTATAGTAGACAGTGTGATTCCCACGGAGCCTGAAACCACAAATGTAACAAAGGCAACAGCCCAAGCTGATGTGCTTATGATGACTCAAAATCCAGGAGGAAAGGAAAGAACTAGAGATGAATTTAAGAGCCTAGCAACCAAAGCTGGGTTTAAACATGTCATATTCCAATGTTTTGTATCTAATCTTTGGGTTATAGAGTTTCTTAAAAATTAA
BLAST of CSPI03G04030 vs. Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1) HSP 1 Score: 289.3 bits (739), Expect = 6.6e-77 Identity = 137/251 (54.58%), Postives = 181/251 (72.11%), Query Frame = 1
BLAST of CSPI03G04030 vs. Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1) HSP 1 Score: 288.9 bits (738), Expect = 8.6e-77 Identity = 139/251 (55.38%), Postives = 175/251 (69.72%), Query Frame = 1
BLAST of CSPI03G04030 vs. Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 1.1e-76 Identity = 132/222 (59.46%), Postives = 168/222 (75.68%), Query Frame = 1
BLAST of CSPI03G04030 vs. Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1) HSP 1 Score: 287.7 bits (735), Expect = 1.9e-76 Identity = 130/222 (58.56%), Postives = 169/222 (76.13%), Query Frame = 1
BLAST of CSPI03G04030 vs. Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1) HSP 1 Score: 286.2 bits (731), Expect = 5.6e-76 Identity = 139/251 (55.38%), Postives = 178/251 (70.92%), Query Frame = 1
BLAST of CSPI03G04030 vs. TrEMBL
Match: A0A061GTC8_THECC (Caffeic acid 3-O-methyltransferase 1 isoform 1 OS=Theobroma cacao GN=TCM_040763 PE=3 SV=1) HSP 1 Score: 346.7 bits (888), Expect = 3.9e-92 Identity = 158/226 (69.91%), Postives = 189/226 (83.63%), Query Frame = 1
BLAST of CSPI03G04030 vs. TrEMBL
Match: A0A0D2RV48_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G126800 PE=3 SV=1) HSP 1 Score: 344.4 bits (882), Expect = 1.9e-91 Identity = 157/226 (69.47%), Postives = 185/226 (81.86%), Query Frame = 1
BLAST of CSPI03G04030 vs. TrEMBL
Match: A0A061GUA1_THECC (Caffeic acid 3-O-methyltransferase 1 isoform 1 OS=Theobroma cacao GN=TCM_040757 PE=3 SV=1) HSP 1 Score: 342.0 bits (876), Expect = 9.5e-91 Identity = 154/226 (68.14%), Postives = 189/226 (83.63%), Query Frame = 1
BLAST of CSPI03G04030 vs. TrEMBL
Match: A0A0N6WHK2_MALDO (O-methyltransferase 2 OS=Malus domestica GN=OMT2 PE=2 SV=1) HSP 1 Score: 339.7 bits (870), Expect = 4.7e-90 Identity = 154/226 (68.14%), Postives = 188/226 (83.19%), Query Frame = 1
BLAST of CSPI03G04030 vs. TrEMBL
Match: A0A061GTL4_THECC (Caffeic acid 3-O-methyltransferase 1 isoform 2 OS=Theobroma cacao GN=TCM_040757 PE=3 SV=1) HSP 1 Score: 337.8 bits (865), Expect = 1.8e-89 Identity = 154/227 (67.84%), Postives = 189/227 (83.26%), Query Frame = 1
BLAST of CSPI03G04030 vs. TAIR10
Match: AT5G54160.1 (AT5G54160.1 O-methyltransferase 1) HSP 1 Score: 282.3 bits (721), Expect = 4.5e-76 Identity = 124/222 (55.86%), Postives = 170/222 (76.58%), Query Frame = 1
BLAST of CSPI03G04030 vs. TAIR10
Match: AT1G21100.1 (AT1G21100.1 O-methyltransferase family protein) HSP 1 Score: 234.6 bits (597), Expect = 1.1e-61 Identity = 110/225 (48.89%), Postives = 154/225 (68.44%), Query Frame = 1
BLAST of CSPI03G04030 vs. TAIR10
Match: AT1G21130.1 (AT1G21130.1 O-methyltransferase family protein) HSP 1 Score: 230.3 bits (586), Expect = 2.0e-60 Identity = 108/225 (48.00%), Postives = 151/225 (67.11%), Query Frame = 1
BLAST of CSPI03G04030 vs. TAIR10
Match: AT1G21110.1 (AT1G21110.1 O-methyltransferase family protein) HSP 1 Score: 229.9 bits (585), Expect = 2.7e-60 Identity = 108/225 (48.00%), Postives = 151/225 (67.11%), Query Frame = 1
BLAST of CSPI03G04030 vs. TAIR10
Match: AT1G21120.1 (AT1G21120.1 O-methyltransferase family protein) HSP 1 Score: 229.2 bits (583), Expect = 4.6e-60 Identity = 108/225 (48.00%), Postives = 152/225 (67.56%), Query Frame = 1
BLAST of CSPI03G04030 vs. NCBI nr
Match: gi|778675782|ref|XP_004148264.2| (PREDICTED: caffeic acid 3-O-methyltransferase [Cucumis sativus]) HSP 1 Score: 461.8 bits (1187), Expect = 1.2e-126 Identity = 222/227 (97.80%), Postives = 224/227 (98.68%), Query Frame = 1
BLAST of CSPI03G04030 vs. NCBI nr
Match: gi|778675776|ref|XP_004150935.2| (PREDICTED: caffeic acid 3-O-methyltransferase-like [Cucumis sativus]) HSP 1 Score: 446.8 bits (1148), Expect = 3.9e-122 Identity = 213/227 (93.83%), Postives = 220/227 (96.92%), Query Frame = 1
BLAST of CSPI03G04030 vs. NCBI nr
Match: gi|659096292|ref|XP_008449018.1| (PREDICTED: caffeic acid 3-O-methyltransferase-like isoform X1 [Cucumis melo]) HSP 1 Score: 436.8 bits (1122), Expect = 4.1e-119 Identity = 206/227 (90.75%), Postives = 217/227 (95.59%), Query Frame = 1
BLAST of CSPI03G04030 vs. NCBI nr
Match: gi|659131286|ref|XP_008465607.1| (PREDICTED: caffeic acid 3-O-methyltransferase 1-like, partial [Cucumis melo]) HSP 1 Score: 375.6 bits (963), Expect = 1.1e-100 Identity = 176/226 (77.88%), Postives = 199/226 (88.05%), Query Frame = 1
BLAST of CSPI03G04030 vs. NCBI nr
Match: gi|449466440|ref|XP_004150934.1| (PREDICTED: caffeic acid 3-O-methyltransferase-like [Cucumis sativus]) HSP 1 Score: 369.0 bits (946), Expect = 1.0e-98 Identity = 173/226 (76.55%), Postives = 197/226 (87.17%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |