CSPI03G04010 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCCTCCGACAACGACACCGCCGTCGAACAGCAACAACATTATGCTTACGCAGGACACCTCGTTACCTTATCAGTCCTACCCATGACACTCCAAGCAGTGTTCGAGCTTGGTGTGTTCGAGATCTTGGCAAAGGCTGGGGATGGGGCCAACCTCTCTCCAGCAGAGATAGCGGCTGAGATAACCACTACAAACCCCAACGCAGCATTGATGCTTGATCGGATGTTGAGGCTTTTGGCATGCCACTCGGTGGTGGGATGCTCTATAGTTTCTGATAAAGATGGGAATGTGCAAAGGCTTTATAGCCTTACTCCGATTTCTAAATGTTATGTTCGAAATGAAGATGGTGTTTCGTTGGGTCCAATGTTATCATTGATTCAAGATAAAGTGTTTCTGCAAAGCTGGTTTGCTCTCCTTAATTTCTTTATGCTTTTTAATATATATTTTTTTCGTTTAATAGAAGGGAAATTAGTAGGAATAGCGAAGATAAAATATAAATGGAGATATGTTATATTAGTGAGAAATTATGTAAGTACAGCTATGTTTGAGAAATTAGAGAGT ATGGCTTCCTCCGACAACGACACCGCCGTCGAACAGCAACAACATTATGCTTACGCAGGACACCTCGTTACCTTATCAGTCCTACCCATGACACTCCAAGCAGTGTTCGAGCTTGGTGTGTTCGAGATCTTGGCAAAGGCTGGGGATGGGGCCAACCTCTCTCCAGCAGAGATAGCGGCTGAGATAACCACTACAAACCCCAACGCAGCATTGATGCTTGATCGGATGTTGAGGCTTTTGGCATGCCACTCGGTGGTGGGATGCTCTATAGTTTCTGATAAAGATGGGAATGTGCAAAGGCTTTATAGCCTTACTCCGATTTCTAAATGTTATGTTCGAAATGAAGATGGTGTTTCGTTGGGTCCAATGTTATCATTGATTCAAGATAAAGTGTTTCTGCAAAGCTGGTTTGCTCTCCTTAATTTCTTTATGCTTTTTAATATATATTTTTTTCGTTTAATAGAAGGGAAATTAGTAGGAATAGCGAAGATAAAATATAAATGGAGATATGTTATATTAGTGAGAAATTATGTAAGTACAGCTATGTTTGAGAAATTAGAGAGT ATGGCTTCCTCCGACAACGACACCGCCGTCGAACAGCAACAACATTATGCTTACGCAGGACACCTCGTTACCTTATCAGTCCTACCCATGACACTCCAAGCAGTGTTCGAGCTTGGTGTGTTCGAGATCTTGGCAAAGGCTGGGGATGGGGCCAACCTCTCTCCAGCAGAGATAGCGGCTGAGATAACCACTACAAACCCCAACGCAGCATTGATGCTTGATCGGATGTTGAGGCTTTTGGCATGCCACTCGGTGGTGGGATGCTCTATAGTTTCTGATAAAGATGGGAATGTGCAAAGGCTTTATAGCCTTACTCCGATTTCTAAATGTTATGTTCGAAATGAAGATGGTGTTTCGTTGGGTCCAATGTTATCATTGATTCAAGATAAAGTGTTTCTGCAAAGCTGGTTTGCTCTCCTTAATTTCTTTATGCTTTTTAATATATATTTTTTTCGTTTAATAGAAGGGAAATTAGTAGGAATAGCGAAGATAAAATATAAATGGAGATATGTTATATTAGTGAGAAATTATGTAAGTACAGCTATGTTTGAGAAATTAGAGAGT
BLAST of CSPI03G04010 vs. Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2) HSP 1 Score: 136.3 bits (342), Expect = 3.3e-31 Identity = 66/139 (47.48%), Postives = 98/139 (70.50%), Query Frame = 1
BLAST of CSPI03G04010 vs. Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 4.4e-31 Identity = 65/132 (49.24%), Postives = 95/132 (71.97%), Query Frame = 1
BLAST of CSPI03G04010 vs. Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 9.7e-31 Identity = 71/135 (52.59%), Postives = 94/135 (69.63%), Query Frame = 1
BLAST of CSPI03G04010 vs. Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 3.7e-30 Identity = 65/139 (46.76%), Postives = 95/139 (68.35%), Query Frame = 1
BLAST of CSPI03G04010 vs. Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 4.1e-29 Identity = 64/132 (48.48%), Postives = 91/132 (68.94%), Query Frame = 1
BLAST of CSPI03G04010 vs. TrEMBL
Match: A0A061GSD8_THECC (Caffeic acid 3-O-methyltransferase 1 OS=Theobroma cacao GN=TCM_040759 PE=3 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.0e-34 Identity = 81/154 (52.60%), Postives = 111/154 (72.08%), Query Frame = 1
BLAST of CSPI03G04010 vs. TrEMBL
Match: A0A061GUA5_THECC (Caffeic acid 3-O-methyltransferase 1 isoform 2 OS=Theobroma cacao GN=TCM_040763 PE=3 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 1.7e-34 Identity = 80/147 (54.42%), Postives = 109/147 (74.15%), Query Frame = 1
BLAST of CSPI03G04010 vs. TrEMBL
Match: A0A061GTC8_THECC (Caffeic acid 3-O-methyltransferase 1 isoform 1 OS=Theobroma cacao GN=TCM_040763 PE=3 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 1.7e-34 Identity = 80/147 (54.42%), Postives = 109/147 (74.15%), Query Frame = 1
BLAST of CSPI03G04010 vs. TrEMBL
Match: W9S415_9ROSA (Caffeic acid 3-O-methyltransferase OS=Morus notabilis GN=L484_019621 PE=3 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 1.5e-33 Identity = 79/135 (58.52%), Postives = 101/135 (74.81%), Query Frame = 1
BLAST of CSPI03G04010 vs. TrEMBL
Match: W9SI12_9ROSA (Caffeic acid 3-O-methyltransferase OS=Morus notabilis GN=L484_013036 PE=3 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 1.9e-33 Identity = 78/145 (53.79%), Postives = 107/145 (73.79%), Query Frame = 1
BLAST of CSPI03G04010 vs. TAIR10
Match: AT5G54160.1 (AT5G54160.1 O-methyltransferase 1) HSP 1 Score: 104.0 bits (258), Expect = 1.0e-22 Identity = 60/149 (40.27%), Postives = 91/149 (61.07%), Query Frame = 1
BLAST of CSPI03G04010 vs. TAIR10
Match: AT1G77520.1 (AT1G77520.1 O-methyltransferase family protein) HSP 1 Score: 96.3 bits (238), Expect = 2.2e-20 Identity = 51/134 (38.06%), Postives = 81/134 (60.45%), Query Frame = 1
BLAST of CSPI03G04010 vs. TAIR10
Match: AT1G77530.1 (AT1G77530.1 O-methyltransferase family protein) HSP 1 Score: 93.6 bits (231), Expect = 1.4e-19 Identity = 50/134 (37.31%), Postives = 81/134 (60.45%), Query Frame = 1
BLAST of CSPI03G04010 vs. TAIR10
Match: AT1G33030.1 (AT1G33030.1 O-methyltransferase family protein) HSP 1 Score: 82.4 bits (202), Expect = 3.2e-16 Identity = 48/131 (36.64%), Postives = 82/131 (62.60%), Query Frame = 1
BLAST of CSPI03G04010 vs. TAIR10
Match: AT1G51990.1 (AT1G51990.1 O-methyltransferase family protein) HSP 1 Score: 80.9 bits (198), Expect = 9.4e-16 Identity = 43/123 (34.96%), Postives = 69/123 (56.10%), Query Frame = 1
BLAST of CSPI03G04010 vs. NCBI nr
Match: gi|778675776|ref|XP_004150935.2| (PREDICTED: caffeic acid 3-O-methyltransferase-like [Cucumis sativus]) HSP 1 Score: 268.9 bits (686), Expect = 6.9e-69 Identity = 137/141 (97.16%), Postives = 138/141 (97.87%), Query Frame = 1
BLAST of CSPI03G04010 vs. NCBI nr
Match: gi|778675782|ref|XP_004148264.2| (PREDICTED: caffeic acid 3-O-methyltransferase [Cucumis sativus]) HSP 1 Score: 250.8 bits (639), Expect = 1.9e-63 Identity = 130/141 (92.20%), Postives = 133/141 (94.33%), Query Frame = 1
BLAST of CSPI03G04010 vs. NCBI nr
Match: gi|659096296|ref|XP_008449020.1| (PREDICTED: caffeic acid 3-O-methyltransferase-like isoform X3 [Cucumis melo]) HSP 1 Score: 219.5 bits (558), Expect = 4.8e-54 Identity = 120/141 (85.11%), Postives = 124/141 (87.94%), Query Frame = 1
BLAST of CSPI03G04010 vs. NCBI nr
Match: gi|659096292|ref|XP_008449018.1| (PREDICTED: caffeic acid 3-O-methyltransferase-like isoform X1 [Cucumis melo]) HSP 1 Score: 219.5 bits (558), Expect = 4.8e-54 Identity = 120/141 (85.11%), Postives = 124/141 (87.94%), Query Frame = 1
BLAST of CSPI03G04010 vs. NCBI nr
Match: gi|449466440|ref|XP_004150934.1| (PREDICTED: caffeic acid 3-O-methyltransferase-like [Cucumis sativus]) HSP 1 Score: 204.1 bits (518), Expect = 2.1e-49 Identity = 103/139 (74.10%), Postives = 120/139 (86.33%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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