CSPI03G03110 (gene) Wild cucumber (PI 183967)

NameCSPI03G03110
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
Descriptionzinc finger (C2H2 type) family protein
LocationChr3 : 2530175 .. 2531734 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAATTTGTGTAATTACACCTATTTTTTTTAAACCCTTTTTTGCTATATGGTTTTGTGTAAAAAAGCCACGTAAAAATAGCCCATATTTTCCTTTCTTTTTGAAAATTGGGCTTCTTCTATTTTGGGCATTCGATAGAGTCTGCCACCAACTAAATCCACCGTTCAATTCCTTACGCGCCGCCCTACAAAGCCCCGCCTCTGCCTCACCTCCGAGAATCCCGCCGCCAAGCGTCCCCCACTGACCGATTCTTCCACTACTCACTCTTTTATTCCAGAGGTTAGTTGAACTTCCATCTCTTCTTTACGTTTATCTTCCGTTCATCCATTTTCGCTCATCCTCAGAATATGTGAAAACAGTTTCTCGCCATGTTATCGTTCATTAGATTTCGGAATTTATCCTACAAATTCCGAAACGAAACTGTTTTGATTAGATGTTTTCATTCTGGAACGAATCCGAAATCCAATTCTCCAGATTCTTCCTCCTCTACCGTTGCTATTTTCTGGGATTTGGATAATAAACCACCGAAATCGTTACCGCCTTACCAAGCTGCTGTTAAGCTTAGGACTGCAGCAGCTTCCTTCGGCGCGGTTCGGTATATGGTGGCGTATGCGAATCGGCATGCGTTTAGCTACGTGCCGCAAGTTGTTAGAGAGCGGAAACGAGAGAGGAAGATGCTTAATCAATTGGAGAGAAAAGGTGTGATTAAATCGATTGAACCATATCTGTGTCGTGTTTGTGGGAGGAATTTTTATACGAATGAGAAGTTAGTGAATCATTTTAAGCAAATTCATGAGAGTGAGCATAAGAAGAGGTTGAATCAGATTGAATCTGCGAAGGGTAGTAGAAGAGTGAAGTTGGTTGCTAAGTATTCAATGAAAATACAGAAGTATAAGAATGCTGCTAGGGATGTTTTGACTCCTGAAGTGGGATATGGTTTAGCTGATGAGTTGAAGAGGGCAGGGTTTTTTGTGAAGACTGTGTCGGATAAGCCTGAAGCTGCTGATGTAGAATTGAGAAATGACATGGTTGAGATTATGGATAGGAGAAAAGCAGAGTGTTTGGTTCTTGTATCAGATGATTCTGATTTTGTGAATGTTTTGAAGGAAGCTAAGTTAAGATGTCTCAGGACAGTTGTTGTAGGGGATTTGAATGATGGGCCATTGAAGAGAAATGCTGATACTGGGTTTTCTTGGCAGGAGATTTTAATGGGGAAGGCTAAAAAAGAGGCTGTTTCTGTTGTGGGAAAATGGAAGGATCGGGATGTTTTGAAGAGATTGGAATGGACATACAATCCTCCGTTGGAGAAGAAAGTGTCTGGTTTAGATGATGATATAGGCGAGGATGACGATGTTGAAGGAGGTTCTGTTGATGGGGGACTTTGTGAGAATATGCAAAATAATGACAGGGGTGCTTGGTGGGATCTCAGCTCTGATGCTGAAACTGATACTGTTTCATCACCATCATGGGAATGACTTAACTGTAGCATGTATCCTTGATTTTTGAATTGCGTTCTCTCTACAATTTATACAAGTTATGGTTCAAATTCCCTTATGTTGAA

mRNA sequence

ATGTTATCGTTCATTAGATTTCGGAATTTATCCTACAAATTCCGAAACGAAACTGTTTTGATTAGATGTTTTCATTCTGGAACGAATCCGAAATCCAATTCTCCAGATTCTTCCTCCTCTACCGTTGCTATTTTCTGGGATTTGGATAATAAACCACCGAAATCGTTACCGCCTTACCAAGCTGCTGTTAAGCTTAGGACTGCAGCAGCTTCCTTCGGCGCGGTTCGGTATATGGTGGCGTATGCGAATCGGCATGCGTTTAGCTACGTGCCGCAAGTTGTTAGAGAGCGGAAACGAGAGAGGAAGATGCTTAATCAATTGGAGAGAAAAGGTGTGATTAAATCGATTGAACCATATCTGTGTCGTGTTTGTGGGAGGAATTTTTATACGAATGAGAAGTTAGTGAATCATTTTAAGCAAATTCATGAGAGTGAGCATAAGAAGAGGTTGAATCAGATTGAATCTGCGAAGGGTAGTAGAAGAGTGAAGTTGGTTGCTAAGTATTCAATGAAAATACAGAAGTATAAGAATGCTGCTAGGGATGTTTTGACTCCTGAAGTGGGATATGGTTTAGCTGATGAGTTGAAGAGGGCAGGGTTTTTTGTGAAGACTGTGTCGGATAAGCCTGAAGCTGCTGATGTAGAATTGAGAAATGACATGGTTGAGATTATGGATAGGAGAAAAGCAGAGTGTTTGGTTCTTGTATCAGATGATTCTGATTTTGTGAATGTTTTGAAGGAAGCTAAGTTAAGATGTCTCAGGACAGTTGTTGTAGGGGATTTGAATGATGGGCCATTGAAGAGAAATGCTGATACTGGGTTTTCTTGGCAGGAGATTTTAATGGGGAAGGCTAAAAAAGAGGCTGTTTCTGTTGTGGGAAAATGGAAGGATCGGGATGTTTTGAAGAGATTGGAATGGACATACAATCCTCCGTTGGAGAAGAAAGTGTCTGGTTTAGATGATGATATAGGCGAGGATGACGATGTTGAAGGAGGTTCTGTTGATGGGGGACTTTGTGAGAATATGCAAAATAATGACAGGGGTGCTTGGTGGGATCTCAGCTCTGATGCTGAAACTGATACTGTTTCATCACCATCATGGGAATGA

Coding sequence (CDS)

ATGTTATCGTTCATTAGATTTCGGAATTTATCCTACAAATTCCGAAACGAAACTGTTTTGATTAGATGTTTTCATTCTGGAACGAATCCGAAATCCAATTCTCCAGATTCTTCCTCCTCTACCGTTGCTATTTTCTGGGATTTGGATAATAAACCACCGAAATCGTTACCGCCTTACCAAGCTGCTGTTAAGCTTAGGACTGCAGCAGCTTCCTTCGGCGCGGTTCGGTATATGGTGGCGTATGCGAATCGGCATGCGTTTAGCTACGTGCCGCAAGTTGTTAGAGAGCGGAAACGAGAGAGGAAGATGCTTAATCAATTGGAGAGAAAAGGTGTGATTAAATCGATTGAACCATATCTGTGTCGTGTTTGTGGGAGGAATTTTTATACGAATGAGAAGTTAGTGAATCATTTTAAGCAAATTCATGAGAGTGAGCATAAGAAGAGGTTGAATCAGATTGAATCTGCGAAGGGTAGTAGAAGAGTGAAGTTGGTTGCTAAGTATTCAATGAAAATACAGAAGTATAAGAATGCTGCTAGGGATGTTTTGACTCCTGAAGTGGGATATGGTTTAGCTGATGAGTTGAAGAGGGCAGGGTTTTTTGTGAAGACTGTGTCGGATAAGCCTGAAGCTGCTGATGTAGAATTGAGAAATGACATGGTTGAGATTATGGATAGGAGAAAAGCAGAGTGTTTGGTTCTTGTATCAGATGATTCTGATTTTGTGAATGTTTTGAAGGAAGCTAAGTTAAGATGTCTCAGGACAGTTGTTGTAGGGGATTTGAATGATGGGCCATTGAAGAGAAATGCTGATACTGGGTTTTCTTGGCAGGAGATTTTAATGGGGAAGGCTAAAAAAGAGGCTGTTTCTGTTGTGGGAAAATGGAAGGATCGGGATGTTTTGAAGAGATTGGAATGGACATACAATCCTCCGTTGGAGAAGAAAGTGTCTGGTTTAGATGATGATATAGGCGAGGATGACGATGTTGAAGGAGGTTCTGTTGATGGGGGACTTTGTGAGAATATGCAAAATAATGACAGGGGTGCTTGGTGGGATCTCAGCTCTGATGCTGAAACTGATACTGTTTCATCACCATCATGGGAATGA
BLAST of CSPI03G03110 vs. TrEMBL
Match: A0A0A0L708_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G035880 PE=4 SV=1)

HSP 1 Score: 727.2 bits (1876), Expect = 9.7e-207
Identity = 367/368 (99.73%), Postives = 367/368 (99.73%), Query Frame = 1

Query: 1   MLSFIRFRNLSYKFRNETVLIRCFHSGTNPKSNSPDSSSSTVAIFWDLDNKPPKSLPPYQ 60
           MLSFIRFRNLSYKFRNETVLIRCFHSGTNPKSNSPDSSSSTVAIFWDLDNKPPKSLPPYQ
Sbjct: 52  MLSFIRFRNLSYKFRNETVLIRCFHSGTNPKSNSPDSSSSTVAIFWDLDNKPPKSLPPYQ 111

Query: 61  AAVKLRTAAASFGAVRYMVAYANRHAFSYVPQVVRERKRERKMLNQLERKGVIKSIEPYL 120
           AAVKLRTAAASFGAVRYMVAYANRHAFSYVPQVVRERKRERKMLNQLERKGVIKSIEPYL
Sbjct: 112 AAVKLRTAAASFGAVRYMVAYANRHAFSYVPQVVRERKRERKMLNQLERKGVIKSIEPYL 171

Query: 121 CRVCGRNFYTNEKLVNHFKQIHESEHKKRLNQIESAKGSRRVKLVAKYSMKIQKYKNAAR 180
           CRVCGRNFYTNEKLVNHFKQIHESEHKKRLNQIESAKGSRRVKLVAKYSMKIQKYKNAAR
Sbjct: 172 CRVCGRNFYTNEKLVNHFKQIHESEHKKRLNQIESAKGSRRVKLVAKYSMKIQKYKNAAR 231

Query: 181 DVLTPEVGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEIMDRRKAECLVLVSDDSD 240
           DVL PEVGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEIMDRRKAECLVLVSDDSD
Sbjct: 232 DVL-PEVGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEIMDRRKAECLVLVSDDSD 291

Query: 241 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWQEILMGKAKKEAVSVVGKWKDRDV 300
           FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWQEILMGKAKKEAVSVVGKWKDRDV
Sbjct: 292 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWQEILMGKAKKEAVSVVGKWKDRDV 351

Query: 301 LKRLEWTYNPPLEKKVSGLDDDIGEDDDVEGGSVDGGLCENMQNNDRGAWWDLSSDAETD 360
           LKRLEWTYNPPLEKKVSGLDDDIGEDDDVEGGSVDGGLCENMQNNDRGAWWDLSSDAETD
Sbjct: 352 LKRLEWTYNPPLEKKVSGLDDDIGEDDDVEGGSVDGGLCENMQNNDRGAWWDLSSDAETD 411

Query: 361 TVSSPSWE 369
           TVSSPSWE
Sbjct: 412 TVSSPSWE 418

BLAST of CSPI03G03110 vs. TrEMBL
Match: A0A061G4Y5_THECC (Zinc finger family protein OS=Theobroma cacao GN=TCM_016068 PE=4 SV=1)

HSP 1 Score: 484.2 bits (1245), Expect = 1.4e-133
Identity = 239/333 (71.77%), Postives = 285/333 (85.59%), Query Frame = 1

Query: 26  SGTNPKSNSPDSSSSTVAIFWDLDNKPPKSLPPYQAAVKLRTAAASFGAVRYMVAYANRH 85
           + T+  + +  ++ + VAIFWDLDNKPP S PP++AAVKL+TAA+SFG VR MVAYAN H
Sbjct: 44  TSTSTSTLASKTAQNRVAIFWDLDNKPPNSFPPFEAAVKLKTAASSFGVVRSMVAYANHH 103

Query: 86  AFSYVPQVVRERKRERKMLNQLERKGVIKSIEPYLCRVCGRNFYTNEKLVNHFKQIHESE 145
           AFSYVP+VVRE+++ERK+LNQLE KGVIKS+EPY CRVCGR FYTNEKL+NHFKQIHE E
Sbjct: 104 AFSYVPKVVREQRKERKLLNQLENKGVIKSVEPYFCRVCGRRFYTNEKLINHFKQIHERE 163

Query: 146 HKKRLNQIESAKGSRRVKLVAKYSMKIQKYKNAARDVLTPEVGYGLADELKRAGFFVKTV 205
           H+KRLNQIE A+GSRRVKLVAKYSMK++KY+NAARDVLTP+VGYGLADELKRAGF++ TV
Sbjct: 164 HQKRLNQIEYARGSRRVKLVAKYSMKMEKYRNAARDVLTPKVGYGLADELKRAGFWIGTV 223

Query: 206 SDKPEAADVELRNDMVEIMDRRKAECLVLVSDDSDFVNVLKEAKLRCLRTVVVGDLNDGP 265
           S+KP+AADV LR+ +V++MD+RKAECLVLVSDDSDFV VLKEAKLRCL+TVVVGD++DG 
Sbjct: 224 SNKPQAADVALRDHIVDVMDKRKAECLVLVSDDSDFVGVLKEAKLRCLKTVVVGDISDGA 283

Query: 266 LKRNADTGFSWQEILMGKAKKEAVSVVGKWKDRDVLKRLEWTYNPPLEKKVSGLDDDIGE 325
           LKR AD GFSW EILMGKAKKEAVSVVGKWKDRD+LKRLEW YNP +E+K+    D+  E
Sbjct: 284 LKRLADAGFSWTEILMGKAKKEAVSVVGKWKDRDILKRLEWKYNPEVERKLYSYGDE-SE 343

Query: 326 DDDVEGGSVDGGLCENMQNNDRGAWWDLSSDAE 359
           D D +  + DG   + M   D GAWWDL SD++
Sbjct: 344 DQDFD-STDDGNDADCMHKEDAGAWWDLDSDSD 374

BLAST of CSPI03G03110 vs. TrEMBL
Match: B9RBR6_RICCO (Nucleic acid binding protein, putative OS=Ricinus communis GN=RCOM_1680000 PE=4 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 3.5e-132
Identity = 241/339 (71.09%), Postives = 282/339 (83.19%), Query Frame = 1

Query: 26  SGTNPKSNSPDSSSSTVAIFWDLDNKPPKSLPPYQAAVKLRTAAASFGAVRYMVAYANRH 85
           S   P  N P    ++VAIFWDLDNKPP S PPY+AA KL+ AA+SFG V+YMVAYANRH
Sbjct: 35  SNLTPTEN-PRKPHNSVAIFWDLDNKPPNSFPPYEAAFKLKKAASSFGFVKYMVAYANRH 94

Query: 86  AFSYVPQVVRERKRERKMLNQLERKGVIKSIEPYLCRVCGRNFYTNEKLVNHFKQIHESE 145
           AFSYVP VV+E+++ERK+LN LE+KGVIK +EPYLCRVCGR FY NEKL+NHFKQIHE E
Sbjct: 95  AFSYVPHVVKEQRKERKLLNHLEKKGVIKPVEPYLCRVCGRRFYNNEKLINHFKQIHERE 154

Query: 146 HKKRLNQIESAKGSRRVKLVAKYSMKIQKYKNAARDVLTPEVGYGLADELKRAGFFVKTV 205
            +KRLNQIESA+G RRV LVAKY+MK+QKYKNAARDVLTP+VGYGLADELKRAGF+V TV
Sbjct: 155 QQKRLNQIESARGKRRVNLVAKYAMKMQKYKNAARDVLTPKVGYGLADELKRAGFWVTTV 214

Query: 206 SDKPEAADVELRNDMVEIMDRRKAECLVLVSDDSDFVNVLKEAKLRCLRTVVVGDLNDGP 265
           SDKP+AADV LR  +V++MD+R+AECLVLVSDDSDFV VLKEAKLRC++TVVVGD+NDG 
Sbjct: 215 SDKPQAADVALREHIVDMMDKRRAECLVLVSDDSDFVGVLKEAKLRCVKTVVVGDINDGA 274

Query: 266 LKRNADTGFSWQEILMGKAKKEAVSVVGKWKDRDVLKRLEWTYNPPLEKK--VSGLDDDI 325
           LKR AD  FSWQEILMGKAKKEAVSVVGKWKDRD+LK+LEWTYNP  +KK  V+  +D  
Sbjct: 275 LKRVADAEFSWQEILMGKAKKEAVSVVGKWKDRDILKKLEWTYNPEEQKKFVVNAFNDYN 334

Query: 326 GEDDDVEGGSVDGGLCEN----MQNNDRGAWWDLSSDAE 359
           G+ D+++ G  DG   EN    MQ    GAWW+L+S+ E
Sbjct: 335 GDTDEIDNGDFDGFSDENGANCMQKEAVGAWWELNSETE 372

BLAST of CSPI03G03110 vs. TrEMBL
Match: A0A0D2QXQ9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G225400 PE=4 SV=1)

HSP 1 Score: 478.0 bits (1229), Expect = 1.0e-131
Identity = 235/335 (70.15%), Postives = 286/335 (85.37%), Query Frame = 1

Query: 33  NSPDSSSSTVAIFWDLDNKPPKSLPPYQAAVKLRTAAASFGAVRYMVAYANRHAFSYVPQ 92
           N   S  ++VA+FWDLDNKPP + PP++A VKL+TAA+SFG VR MVAYAN+H+FSYVP+
Sbjct: 42  NQTSSVQNSVAVFWDLDNKPPNAFPPFEAVVKLKTAASSFGVVRSMVAYANQHSFSYVPK 101

Query: 93  VVRERKRERKMLNQLERKGVIKSIEPYLCRVCGRNFYTNEKLVNHFKQIHESEHKKRLNQ 152
            VRE++RERK+LNQLE KGVIKSI+PY+C+VCGR FYTNEKLVNHFKQIHE EH+KR+NQ
Sbjct: 102 AVREQRRERKLLNQLENKGVIKSIDPYVCKVCGRRFYTNEKLVNHFKQIHEREHQKRVNQ 161

Query: 153 IESAKGSRRVKLVAKYSMKIQKYKNAARDVLTPEVGYGLADELKRAGFFVKTVSDKPEAA 212
           IESA+GSRRVKLV KYSMK++KYKNAAR+VLTP+VGYGLADELKRAGF+V TVS++P+AA
Sbjct: 162 IESARGSRRVKLVGKYSMKMEKYKNAAREVLTPKVGYGLADELKRAGFWVGTVSNRPQAA 221

Query: 213 DVELRNDMVEIMDRRKAECLVLVSDDSDFVNVLKEAKLRCLRTVVVGDLNDGPLKRNADT 272
           DV LR+ MV++MD+RKAECL+LVSDDSDFV VLKEAKLRCL+TVVVGD +DG LKR AD 
Sbjct: 222 DVALRDHMVDVMDKRKAECLMLVSDDSDFVGVLKEAKLRCLKTVVVGDADDGALKRVADA 281

Query: 273 GFSWQEILMGKAKKEAVSVVGKWKDRDVLKRLEWTYNPPLEKKVSGLD---DDIGEDDDV 332
           GFSW EIL GKAKKEAVSVVGKWKDRD+LK+LEWTY+P +E+K+ G +   DD  ED D 
Sbjct: 282 GFSWTEILKGKAKKEAVSVVGKWKDRDILKKLEWTYDPEVERKLYGSEDMFDDESEDLDF 341

Query: 333 EGGSVDGGLCENMQNNDRGAWWDLSSDAETDTVSS 365
           + GS DG   + +   D GAWW+L ++++ D+  S
Sbjct: 342 D-GSDDGNSSDYIHKEDSGAWWELDTESDPDSSKS 375

BLAST of CSPI03G03110 vs. TrEMBL
Match: A0A059C0Y7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E00472 PE=4 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 6.6e-131
Identity = 233/327 (71.25%), Postives = 282/327 (86.24%), Query Frame = 1

Query: 34  SPDSSS-STVAIFWDLDNKPPKSLPPYQAAVKLRTAAASFGAVRYMVAYANRHAFSYVPQ 93
           SP SS+ ++VAIFWDLDNKPP S PP+ AA+KL+ +A+SFG V+YMVAYANRHAFSYVP 
Sbjct: 48  SPSSSNKNSVAIFWDLDNKPPNSFPPFDAAIKLKASASSFGVVQYMVAYANRHAFSYVPP 107

Query: 94  VVRERKRERKMLNQLERKGVIKSIEPYLCRVCGRNFYTNEKLVNHFKQIHESEHKKRLNQ 153
            VRE+++ERK+LN+LE KGVI+ +EPYLCRVCGR FYTNEKL+NHFKQIHE EH KR++Q
Sbjct: 108 DVREQRKERKVLNKLENKGVIRPMEPYLCRVCGRKFYTNEKLINHFKQIHEREHTKRVSQ 167

Query: 154 IESAKGSRRVKLVAKYSMKIQKYKNAARDVLTPEVGYGLADELKRAGFFVKTVSDKPEAA 213
           IES +G RRV LVAKYSMK++KYKN+ARDVLTP+VGYGLA ELKRAGFFV  VSDKP+AA
Sbjct: 168 IESTRGKRRVNLVAKYSMKMEKYKNSARDVLTPKVGYGLAGELKRAGFFVNMVSDKPQAA 227

Query: 214 DVELRNDMVEIMDRRKAECLVLVSDDSDFVNVLKEAKLRCLRTVVVGDLNDGPLKRNADT 273
           D+ LRN++V++MD+RKA+CLVLVSDDSDFV++LKEAK+RCLRTVVVGD+NDGPLKR AD 
Sbjct: 228 DIALRNNIVDVMDKRKADCLVLVSDDSDFVDILKEAKMRCLRTVVVGDINDGPLKRTADV 287

Query: 274 GFSWQEILMGKAKKEAVSVVGKWKDRDVLKRLEWTYNPPLEKKVSG-LDDDIGEDDDVEG 333
           GFSW++ILMGKAKKEA SVVG+W DRD+LKRLEWTYNP +++K+S   D+  G+D +   
Sbjct: 288 GFSWRDILMGKAKKEAASVVGRWNDRDILKRLEWTYNPEVDRKMSDYFDESEGQDFEDSD 347

Query: 334 GSVDGGLCENMQNNDRGAWWDLSSDAE 359
           G VDG   E  ++N R AWWDL SD E
Sbjct: 348 GGVDGDFIE--KDNTR-AWWDLDSDDE 371

BLAST of CSPI03G03110 vs. TAIR10
Match: AT4G12240.1 (AT4G12240.1 zinc finger (C2H2 type) family protein)

HSP 1 Score: 417.5 bits (1072), Expect = 8.3e-117
Identity = 211/357 (59.10%), Postives = 267/357 (74.79%), Query Frame = 1

Query: 4   FIRFRNLSYKFRNETVLIRCFHSGTNPKSNSPDSSSSTVAIFWDLDNKPPKSLPPYQAAV 63
           F RF   S++ + +T  +      +   S+        V ++WDLDNKPP S PPY AAV
Sbjct: 2   FSRFVLKSWRPKTQTTSLNSIKGFSFSSSSINPKPKIRVGVWWDLDNKPPASFPPYDAAV 61

Query: 64  KLRTAAASFGAVRYMVAYANRHAFSYVPQVVRERKRERKMLNQLERKGVIKSIEPYLCRV 123
           KLRTAA+SFG V+ M+AYANRHAFSYVP  VRE++++RK+LN+LE KG++K  EPY C V
Sbjct: 62  KLRTAASSFGTVKLMMAYANRHAFSYVPLEVREQRKDRKLLNKLENKGLVKPPEPYFCGV 121

Query: 124 CGRNFYTNEKLVNHFKQIHESEHKKRLNQIESAKGSRRVKLVAKYSMKIQKYKNAARDVL 183
           C R FYTNEKL+NHFKQIHE+E++KR+ QIES+KG RRV+LVAKYSMKI+KYK AAR+VL
Sbjct: 122 CDRRFYTNEKLINHFKQIHETENQKRMRQIESSKGHRRVRLVAKYSMKIEKYKRAARNVL 181

Query: 184 TPEVGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEIMDRRKAECLVLVSDDSDFVN 243
           TP+ GYGLADELKRAGF+VK VSDKP+AAD  L+  +VE+MD+R+ EC+VLVSDDSDF  
Sbjct: 182 TPKEGYGLADELKRAGFWVKMVSDKPDAADKALKEHLVEVMDKREVECVVLVSDDSDFAG 241

Query: 244 VLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWQEILMGKAKKEAVSVVGKWKDRDVLKR 303
           +L EAK RCLRTVV+GD N+G LKR AD  +SW+E+ MGKAKKE   VVGKWKDRDVLK+
Sbjct: 242 ILWEAKERCLRTVVIGDSNEGALKRVADVAYSWKEVTMGKAKKEVEKVVGKWKDRDVLKK 301

Query: 304 LEWTYNPPLEKKVSG----LDDDIGEDDDVEGGSVDGGLCENMQNNDRGAWWDLSSD 357
           LEWTY+P LEK+  G     D +   DD++E G+      E ++  D   WW + ++
Sbjct: 302 LEWTYDPALEKERGGSCGVWDYEFDYDDEIENGTE----VEPVEIGDGVDWWKIDTE 354

BLAST of CSPI03G03110 vs. TAIR10
Match: AT5G52010.1 (AT5G52010.1 C2H2-like zinc finger protein)

HSP 1 Score: 216.1 bits (549), Expect = 3.7e-56
Identity = 117/242 (48.35%), Postives = 158/242 (65.29%), Query Frame = 1

Query: 42  VAIFWDLDNKPPKSLPPYQAAVKLRTAAASFGAVRYMVAYANRHAFSYVPQVVRERKRER 101
           V + WDLDNKPP+  PPY+AA  LR  A   G V  + AYANRHAF ++P  V E +RER
Sbjct: 76  VVVLWDLDNKPPRG-PPYEAATALRKVAEKLGRVVEISAYANRHAFIHLPHWVVEERRER 135

Query: 102 KMLNQLERKGVIKSIEPYLCRVCGRNFYTNEKLVNHFKQIHESEHKKRLNQIESAKGSRR 161
           + L+ +ERKG +  I+PY+C VCGR   TN  L  HFKQ+HE E +K++N++ S KG +R
Sbjct: 136 RNLDFMERKGEVTPIDPYICGVCGRKCKTNLDLKKHFKQLHERERQKKVNRMRSLKGKKR 195

Query: 162 VKLVAKYSMKIQKYKNAARDVLTPEVGYGLADELKRAGFFVKTVSDKPEAADVELRNDMV 221
            K   +Y    +KY  AAR +LTP+VGYGL  EL+RAG +VKTV DKP+AAD  ++  + 
Sbjct: 196 QKFKERYVSGNEKYNEAARSLLTPKVGYGLEAELRRAGVYVKTVEDKPQAADWAVKRQIQ 255

Query: 222 EIMDRRKAECLVLVSDDSDFVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWQEILM 281
             M  R  + LVLVSDD DF ++L++A+   L T+VV D+ D  L R+AD    W  +  
Sbjct: 256 HSM-TRGIDWLVLVSDDKDFSDMLRKAREADLGTLVVSDM-DRALGRHADLWVPWSGVEK 314

Query: 282 GK 284
           G+
Sbjct: 316 GE 314

BLAST of CSPI03G03110 vs. NCBI nr
Match: gi|449460491|ref|XP_004147979.1| (PREDICTED: uncharacterized protein LOC101211196 [Cucumis sativus])

HSP 1 Score: 727.2 bits (1876), Expect = 1.4e-206
Identity = 367/368 (99.73%), Postives = 367/368 (99.73%), Query Frame = 1

Query: 1   MLSFIRFRNLSYKFRNETVLIRCFHSGTNPKSNSPDSSSSTVAIFWDLDNKPPKSLPPYQ 60
           MLSFIRFRNLSYKFRNETVLIRCFHSGTNPKSNSPDSSSSTVAIFWDLDNKPPKSLPPYQ
Sbjct: 1   MLSFIRFRNLSYKFRNETVLIRCFHSGTNPKSNSPDSSSSTVAIFWDLDNKPPKSLPPYQ 60

Query: 61  AAVKLRTAAASFGAVRYMVAYANRHAFSYVPQVVRERKRERKMLNQLERKGVIKSIEPYL 120
           AAVKLRTAAASFGAVRYMVAYANRHAFSYVPQVVRERKRERKMLNQLERKGVIKSIEPYL
Sbjct: 61  AAVKLRTAAASFGAVRYMVAYANRHAFSYVPQVVRERKRERKMLNQLERKGVIKSIEPYL 120

Query: 121 CRVCGRNFYTNEKLVNHFKQIHESEHKKRLNQIESAKGSRRVKLVAKYSMKIQKYKNAAR 180
           CRVCGRNFYTNEKLVNHFKQIHESEHKKRLNQIESAKGSRRVKLVAKYSMKIQKYKNAAR
Sbjct: 121 CRVCGRNFYTNEKLVNHFKQIHESEHKKRLNQIESAKGSRRVKLVAKYSMKIQKYKNAAR 180

Query: 181 DVLTPEVGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEIMDRRKAECLVLVSDDSD 240
           DVL PEVGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEIMDRRKAECLVLVSDDSD
Sbjct: 181 DVL-PEVGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEIMDRRKAECLVLVSDDSD 240

Query: 241 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWQEILMGKAKKEAVSVVGKWKDRDV 300
           FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWQEILMGKAKKEAVSVVGKWKDRDV
Sbjct: 241 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWQEILMGKAKKEAVSVVGKWKDRDV 300

Query: 301 LKRLEWTYNPPLEKKVSGLDDDIGEDDDVEGGSVDGGLCENMQNNDRGAWWDLSSDAETD 360
           LKRLEWTYNPPLEKKVSGLDDDIGEDDDVEGGSVDGGLCENMQNNDRGAWWDLSSDAETD
Sbjct: 301 LKRLEWTYNPPLEKKVSGLDDDIGEDDDVEGGSVDGGLCENMQNNDRGAWWDLSSDAETD 360

Query: 361 TVSSPSWE 369
           TVSSPSWE
Sbjct: 361 TVSSPSWE 367

BLAST of CSPI03G03110 vs. NCBI nr
Match: gi|700200778|gb|KGN55911.1| (hypothetical protein Csa_3G035880 [Cucumis sativus])

HSP 1 Score: 727.2 bits (1876), Expect = 1.4e-206
Identity = 367/368 (99.73%), Postives = 367/368 (99.73%), Query Frame = 1

Query: 1   MLSFIRFRNLSYKFRNETVLIRCFHSGTNPKSNSPDSSSSTVAIFWDLDNKPPKSLPPYQ 60
           MLSFIRFRNLSYKFRNETVLIRCFHSGTNPKSNSPDSSSSTVAIFWDLDNKPPKSLPPYQ
Sbjct: 52  MLSFIRFRNLSYKFRNETVLIRCFHSGTNPKSNSPDSSSSTVAIFWDLDNKPPKSLPPYQ 111

Query: 61  AAVKLRTAAASFGAVRYMVAYANRHAFSYVPQVVRERKRERKMLNQLERKGVIKSIEPYL 120
           AAVKLRTAAASFGAVRYMVAYANRHAFSYVPQVVRERKRERKMLNQLERKGVIKSIEPYL
Sbjct: 112 AAVKLRTAAASFGAVRYMVAYANRHAFSYVPQVVRERKRERKMLNQLERKGVIKSIEPYL 171

Query: 121 CRVCGRNFYTNEKLVNHFKQIHESEHKKRLNQIESAKGSRRVKLVAKYSMKIQKYKNAAR 180
           CRVCGRNFYTNEKLVNHFKQIHESEHKKRLNQIESAKGSRRVKLVAKYSMKIQKYKNAAR
Sbjct: 172 CRVCGRNFYTNEKLVNHFKQIHESEHKKRLNQIESAKGSRRVKLVAKYSMKIQKYKNAAR 231

Query: 181 DVLTPEVGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEIMDRRKAECLVLVSDDSD 240
           DVL PEVGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEIMDRRKAECLVLVSDDSD
Sbjct: 232 DVL-PEVGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEIMDRRKAECLVLVSDDSD 291

Query: 241 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWQEILMGKAKKEAVSVVGKWKDRDV 300
           FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWQEILMGKAKKEAVSVVGKWKDRDV
Sbjct: 292 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWQEILMGKAKKEAVSVVGKWKDRDV 351

Query: 301 LKRLEWTYNPPLEKKVSGLDDDIGEDDDVEGGSVDGGLCENMQNNDRGAWWDLSSDAETD 360
           LKRLEWTYNPPLEKKVSGLDDDIGEDDDVEGGSVDGGLCENMQNNDRGAWWDLSSDAETD
Sbjct: 352 LKRLEWTYNPPLEKKVSGLDDDIGEDDDVEGGSVDGGLCENMQNNDRGAWWDLSSDAETD 411

Query: 361 TVSSPSWE 369
           TVSSPSWE
Sbjct: 412 TVSSPSWE 418

BLAST of CSPI03G03110 vs. NCBI nr
Match: gi|659096059|ref|XP_008448905.1| (PREDICTED: uncharacterized protein LOC103490929 [Cucumis melo])

HSP 1 Score: 695.7 bits (1794), Expect = 4.5e-197
Identity = 348/368 (94.57%), Postives = 360/368 (97.83%), Query Frame = 1

Query: 1   MLSFIRFRNLSYKFRNETVLIRCFHSGTNPKSNSPDSSSSTVAIFWDLDNKPPKSLPPYQ 60
           M+SF+RFRNLSYKFRNET L+R FHSGTNPKSNSPDSS STVAIFWDLDNKPPKSLPPYQ
Sbjct: 1   MISFVRFRNLSYKFRNETDLVRRFHSGTNPKSNSPDSSYSTVAIFWDLDNKPPKSLPPYQ 60

Query: 61  AAVKLRTAAASFGAVRYMVAYANRHAFSYVPQVVRERKRERKMLNQLERKGVIKSIEPYL 120
           AAVKL+TAAASFGAVRYMVAYANRHAFSYVPQVVRERKRERKMLNQLERKGVIKSIEPYL
Sbjct: 61  AAVKLKTAAASFGAVRYMVAYANRHAFSYVPQVVRERKRERKMLNQLERKGVIKSIEPYL 120

Query: 121 CRVCGRNFYTNEKLVNHFKQIHESEHKKRLNQIESAKGSRRVKLVAKYSMKIQKYKNAAR 180
           CRVCGRNFY  EKLVNHFKQIHESEHKKRLNQIESA+GSRRVKL+AKYSMKIQKYKNAAR
Sbjct: 121 CRVCGRNFYMYEKLVNHFKQIHESEHKKRLNQIESARGSRRVKLIAKYSMKIQKYKNAAR 180

Query: 181 DVLTPEVGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEIMDRRKAECLVLVSDDSD 240
           DVLTPEVGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEIMDRR+AECLVLVSDDSD
Sbjct: 181 DVLTPEVGYGLADELKRAGFFVKTVSDKPEAADVELRNDMVEIMDRRRAECLVLVSDDSD 240

Query: 241 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWQEILMGKAKKEAVSVVGKWKDRDV 300
           FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSW+EILMGKAKKEAVSVVGKWKDRDV
Sbjct: 241 FVNVLKEAKLRCLRTVVVGDLNDGPLKRNADTGFSWKEILMGKAKKEAVSVVGKWKDRDV 300

Query: 301 LKRLEWTYNPPLEKKVSGLDDDIGEDDDVEGGSVDGGLCENMQNNDRGAWWDLSSDAETD 360
           LKRLEWTYNP LEK+VSGLDDDIGE+D+VE GSVDGGLCE MQNNDRGAWWDLSSDAETD
Sbjct: 301 LKRLEWTYNPQLEKEVSGLDDDIGEEDNVEEGSVDGGLCEIMQNNDRGAWWDLSSDAETD 360

Query: 361 TVSSPSWE 369
           TVSSPSW+
Sbjct: 361 TVSSPSWK 368

BLAST of CSPI03G03110 vs. NCBI nr
Match: gi|590677275|ref|XP_007039972.1| (Zinc finger family protein [Theobroma cacao])

HSP 1 Score: 484.2 bits (1245), Expect = 2.1e-133
Identity = 239/333 (71.77%), Postives = 285/333 (85.59%), Query Frame = 1

Query: 26  SGTNPKSNSPDSSSSTVAIFWDLDNKPPKSLPPYQAAVKLRTAAASFGAVRYMVAYANRH 85
           + T+  + +  ++ + VAIFWDLDNKPP S PP++AAVKL+TAA+SFG VR MVAYAN H
Sbjct: 44  TSTSTSTLASKTAQNRVAIFWDLDNKPPNSFPPFEAAVKLKTAASSFGVVRSMVAYANHH 103

Query: 86  AFSYVPQVVRERKRERKMLNQLERKGVIKSIEPYLCRVCGRNFYTNEKLVNHFKQIHESE 145
           AFSYVP+VVRE+++ERK+LNQLE KGVIKS+EPY CRVCGR FYTNEKL+NHFKQIHE E
Sbjct: 104 AFSYVPKVVREQRKERKLLNQLENKGVIKSVEPYFCRVCGRRFYTNEKLINHFKQIHERE 163

Query: 146 HKKRLNQIESAKGSRRVKLVAKYSMKIQKYKNAARDVLTPEVGYGLADELKRAGFFVKTV 205
           H+KRLNQIE A+GSRRVKLVAKYSMK++KY+NAARDVLTP+VGYGLADELKRAGF++ TV
Sbjct: 164 HQKRLNQIEYARGSRRVKLVAKYSMKMEKYRNAARDVLTPKVGYGLADELKRAGFWIGTV 223

Query: 206 SDKPEAADVELRNDMVEIMDRRKAECLVLVSDDSDFVNVLKEAKLRCLRTVVVGDLNDGP 265
           S+KP+AADV LR+ +V++MD+RKAECLVLVSDDSDFV VLKEAKLRCL+TVVVGD++DG 
Sbjct: 224 SNKPQAADVALRDHIVDVMDKRKAECLVLVSDDSDFVGVLKEAKLRCLKTVVVGDISDGA 283

Query: 266 LKRNADTGFSWQEILMGKAKKEAVSVVGKWKDRDVLKRLEWTYNPPLEKKVSGLDDDIGE 325
           LKR AD GFSW EILMGKAKKEAVSVVGKWKDRD+LKRLEW YNP +E+K+    D+  E
Sbjct: 284 LKRLADAGFSWTEILMGKAKKEAVSVVGKWKDRDILKRLEWKYNPEVERKLYSYGDE-SE 343

Query: 326 DDDVEGGSVDGGLCENMQNNDRGAWWDLSSDAE 359
           D D +  + DG   + M   D GAWWDL SD++
Sbjct: 344 DQDFD-STDDGNDADCMHKEDAGAWWDLDSDSD 374

BLAST of CSPI03G03110 vs. NCBI nr
Match: gi|223549499|gb|EEF50987.1| (nucleic acid binding protein, putative [Ricinus communis])

HSP 1 Score: 479.6 bits (1233), Expect = 5.1e-132
Identity = 241/339 (71.09%), Postives = 282/339 (83.19%), Query Frame = 1

Query: 26  SGTNPKSNSPDSSSSTVAIFWDLDNKPPKSLPPYQAAVKLRTAAASFGAVRYMVAYANRH 85
           S   P  N P    ++VAIFWDLDNKPP S PPY+AA KL+ AA+SFG V+YMVAYANRH
Sbjct: 35  SNLTPTEN-PRKPHNSVAIFWDLDNKPPNSFPPYEAAFKLKKAASSFGFVKYMVAYANRH 94

Query: 86  AFSYVPQVVRERKRERKMLNQLERKGVIKSIEPYLCRVCGRNFYTNEKLVNHFKQIHESE 145
           AFSYVP VV+E+++ERK+LN LE+KGVIK +EPYLCRVCGR FY NEKL+NHFKQIHE E
Sbjct: 95  AFSYVPHVVKEQRKERKLLNHLEKKGVIKPVEPYLCRVCGRRFYNNEKLINHFKQIHERE 154

Query: 146 HKKRLNQIESAKGSRRVKLVAKYSMKIQKYKNAARDVLTPEVGYGLADELKRAGFFVKTV 205
            +KRLNQIESA+G RRV LVAKY+MK+QKYKNAARDVLTP+VGYGLADELKRAGF+V TV
Sbjct: 155 QQKRLNQIESARGKRRVNLVAKYAMKMQKYKNAARDVLTPKVGYGLADELKRAGFWVTTV 214

Query: 206 SDKPEAADVELRNDMVEIMDRRKAECLVLVSDDSDFVNVLKEAKLRCLRTVVVGDLNDGP 265
           SDKP+AADV LR  +V++MD+R+AECLVLVSDDSDFV VLKEAKLRC++TVVVGD+NDG 
Sbjct: 215 SDKPQAADVALREHIVDMMDKRRAECLVLVSDDSDFVGVLKEAKLRCVKTVVVGDINDGA 274

Query: 266 LKRNADTGFSWQEILMGKAKKEAVSVVGKWKDRDVLKRLEWTYNPPLEKK--VSGLDDDI 325
           LKR AD  FSWQEILMGKAKKEAVSVVGKWKDRD+LK+LEWTYNP  +KK  V+  +D  
Sbjct: 275 LKRVADAEFSWQEILMGKAKKEAVSVVGKWKDRDILKKLEWTYNPEEQKKFVVNAFNDYN 334

Query: 326 GEDDDVEGGSVDGGLCEN----MQNNDRGAWWDLSSDAE 359
           G+ D+++ G  DG   EN    MQ    GAWW+L+S+ E
Sbjct: 335 GDTDEIDNGDFDGFSDENGANCMQKEAVGAWWELNSETE 372

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L708_CUCSA9.7e-20799.73Uncharacterized protein OS=Cucumis sativus GN=Csa_3G035880 PE=4 SV=1[more]
A0A061G4Y5_THECC1.4e-13371.77Zinc finger family protein OS=Theobroma cacao GN=TCM_016068 PE=4 SV=1[more]
B9RBR6_RICCO3.5e-13271.09Nucleic acid binding protein, putative OS=Ricinus communis GN=RCOM_1680000 PE=4 ... [more]
A0A0D2QXQ9_GOSRA1.0e-13170.15Uncharacterized protein OS=Gossypium raimondii GN=B456_007G225400 PE=4 SV=1[more]
A0A059C0Y7_EUCGR6.6e-13171.25Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E00472 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G12240.18.3e-11759.10 zinc finger (C2H2 type) family protein[more]
AT5G52010.13.7e-5648.35 C2H2-like zinc finger protein[more]
Match NameE-valueIdentityDescription
gi|449460491|ref|XP_004147979.1|1.4e-20699.73PREDICTED: uncharacterized protein LOC101211196 [Cucumis sativus][more]
gi|700200778|gb|KGN55911.1|1.4e-20699.73hypothetical protein Csa_3G035880 [Cucumis sativus][more]
gi|659096059|ref|XP_008448905.1|4.5e-19794.57PREDICTED: uncharacterized protein LOC103490929 [Cucumis melo][more]
gi|590677275|ref|XP_007039972.1|2.1e-13371.77Zinc finger family protein [Theobroma cacao][more]
gi|223549499|gb|EEF50987.1|5.1e-13271.09nucleic acid binding protein, putative [Ricinus communis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007087Zinc finger, C2H2
IPR013087Znf_C2H2_type
IPR021139NYN_limkain-b1
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0003676nucleic acid binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006412 translation
biological_process GO:0008150 biological_process
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005840 ribosome
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0003735 structural constituent of ribosome

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G03110.1CSPI03G03110.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 121..142
scor
IPR007087Zinc finger, C2H2PROFILEPS50157ZINC_FINGER_C2H2_2coord: 119..147
score: 12
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3DG3DSA:3.30.160.60coord: 123..143
score: 7.
IPR021139NYN domain, limkain-b1-typePFAMPF01936NYNcoord: 181..271
score: 4.3
NoneNo IPR availableunknownCoilCoilcoord: 90..110
scor
NoneNo IPR availablePANTHERPTHR35744FAMILY NOT NAMEDcoord: 2..356
score: 3.6E
NoneNo IPR availablePANTHERPTHR35744:SF2C2H2 TYPE ZINC FINGER PROTEINcoord: 2..356
score: 3.6E
NoneNo IPR availableunknownSSF57667beta-beta-alpha zinc fingerscoord: 118..144
score: 5.5

The following gene(s) are paralogous to this gene:

None