CSPI03G03040 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI03G03040
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	NADH dehydrogenase (ubiquinone) complex I, assembly factor 6
Location	Chr3 : 2492204 .. 2496510 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACGGGTTTTATTCCTCGCACCTCCGTTGAAGCTCTCCATTGCACTTTATCGTCTCTCAGCCGGTGCCTCCATTTCTGTTCGCTCAAGAGCCATCCATCTCTTGCGCTCTCTTCACCTTTGCCATCTCTCTGGCTGTTCTTCAAGTGTGGGTGTCGTTTGTGAGATCAAAAATGAAGTTTGGTTTTTTCCTGATCTGTGAGGTACTGGGGTTTTTCTTTTCTTCCAAGTTCTGATCTTAGTTTTTTATTTTACTTTAGTGCTTCAGATTTTTGTTTGCTTTCTCTGAATTTTTTTCTCTTCGGGTTAATTTTCTATGTAATATTTATTTTTTTGTTTTGTAATCTGAGTATTTAGTTTCTCAAGATGCAATCTCATGGTTCTTTTGTTTGAGATTCTTGTTGAGTTTCTATGTAATCGTTAGATTCGAGTTCTTCGTCGGTTTTGTACGCCCATGGTCTTCATGTGCTATCTCTGTCCTTGTCTAAACAAATAAATTGTAAGCTTGTTTTGACATTTAAGGGATTCTTTGAATTCCCAATTGGAGTAAGTTTTCCGGCAACTGTTATTTCAACAATTTGTTAGGAAGGTCTTGTATGGATCATTTCAAAATTTACGGCATCTTCTATTTAACCTCTTTATTTTGTAATTTAAATTGTGGGCAATGGCTGTAACTCGGAAAGATGGTGTATTGGTGGAATCTATTTGTTTGCTTTAAGTACTGAATAAAACAATCTTTCTTTCTGATGCATGAATTTTAGATTTTGTTGTTTGATCTTCAGCTTGGTTTACGAAGTGCGTAGATGTAAGGTCTTGGGAGTAAATGTAAGGTCTTGGTGGGTTTTTTTTTGTGATGATGTGAGGGCTAAAAATCAATAGGAGTAAATGTAGGTCTTGGGTATCAATTTCGATCAGGGTAAGCTTCATAAATGGGCATCGGTTGGTTGTGATGTCAGTTCCCTTCCAACCAATTATCTGGGTCTCCCTTTGGGGGGCAATCAGAGGGCTGTGTCCGTATGGGATCTTGTTTGTGAGAAGATTCGTAAAAGGTTAGCCTCTTGGAAGACAGGTTTCTTTTCTAAGGGTGGCACATTAACTTTGATTAGATCTGTGCTTAGTGGGATTCCTGTTTACTACTACTCCTTATTCAAAGCCCCTAACTCCGTTTGCAAAATCATCAAGAAGCTTATGAGAGATTTTCTTTGGAAAGGAATGGATGAGAGGAGGGGATCTCGTTTGGTTAGCTGGCAAGTTGTTGAGTTCCCTGTGAATCAAGGAGGGCTGGAAATTGGTAACTTAAGGTTGTGTAACAAAGCTTTGTGGTGAGGTAGCATTGGTTTTACCCTTGAGTCTGATTCGATCATCGTGAGGTAGCATGGCTCTGGTCCCTTTGTTGGAAGGATATCTCACTTGAGATCCCTTCTTTCTCTTCTTGGGTTAGGTGCTGGGGGTAGATGATAAAAAAACATTCTTTTGGGAAGATCAATGGGTTGGGGTTAGCCCCCTTTGTTCGGTCTATCCTCATCTTTATTAGTTGGGATATTTGACTTCTTGGTTTGAGCAGGAAGTTCAGTGTCTTTTTCTTTCGAGTTCCCTTGTAACTTATCTAATAGGGAAATGACAGAAATGGCTTCTCTGCTTTCTTTCTTTCCTTGATGAGTGTGACTTTAGGGTGGGGAGGAGGGATGTTCGTGTTTGGAAGCCCAATCCTTCGGAAGGTTTTGTTTGCAAATCATTGTTCATGTTCTGTTAGACCCCTCCCTTGATAGTACGTCTGTTTTTAGTGAGGTTTGGAGGATAAAGATTCCAGAGGAAATTAAGTTCTTTATTTGGCAGGTTTTGTTAGGCCATGTGAATATGATGTGATACTAAATAACTACTTCTACAACTACTTTTCTGTTGAAAGTAGTTCTTTTTGTAATTTGTGTAAATAAATACAAAGATTCTATCGGTTACAGATGGTATGTGGTATGATAACATTATGAATTTTCATTTGCAGGTGGAATGACATTTGGGATGTGATGAATGGAACTTTCGCATCCAGTAGCTTACGCGCTGCGTTTTCGCACTGTGTACAGCAAGTCCGAAGCTATGACTACCATCACTACCTCTGCCTCCTCGAACTTCCCCCTTCTATGAGAAAGGCTGCATTTGCACTCCGAGCATTTAATGTTGAAACATCAAGAGCCATGGACGTTGCTACTGATCCCAGGATAGGTCTTATGCGACTTGTGTGGTGGCAGGAAGCTATTGACAAAATATATGCTAGTAAAAAGATTGAACATCCAATAGCGCAAGCCCTTTCATCTGTGATATCGGAGAACAAAATTAGCAAACTGTGGCTGAAAAGGTCTGTTGAAGCTCGGATTAATGATGCCAGAAGGGAGGACACTGACATTCCAACAGCCATTGATGAACTAGAGAAATATGCCGAAGATACTGCATCAACACTACTCTACATGACCCTTCAGGCTGGTGGTATTAGGTCGACAGCAGCCGATCATGCTGCATCTCATATCGGTAAGGCCAGCGGGCTGCTCTTGTTGCTGAAGTCATTACCATATCATGCTACTCGAAATCGCCATTTTTCTTACATTCCTGTTAAAGTGGCCGAAAATCATGGTTTGTTGGCAAAGGAGGGTGTGCGTTTTGAGATACGCTTGGATTCAAGAGAGAGCCTATGTGATGCAGTTTTTGAAATGGCTTCAGTAGCGAATGCTCATTTGCAAAAAGCTCGAGACTTAGCCGGGACAGTGCCGAGGGAGGCTCTGCCTGTGCTTCTGCAGGCCGTGCCAGCTCAGGTTCTTTTGGATTCTTTAAGGAAAGTACAGTTTGATGTTTTTGACTCAAGATTACAACGTGGAGTTTTGGGTGTTTCTCCTTTGTGGTTTCAAATGAGATTAAAGTGGTCTTCTTGGAGGGGAAAATACTAACAATATTTTTCTTTACTCTAGGGAAGATTTTATTGATTAACCTTTATTTCCTCAAGAGTAAGTACTGATCTTAAAATTTTGATCTCATCAAATTGAGTTATAGATTTTAATAAAAGATGACATTAGTACTTTTCGATCGATAATTTGTTAGTACCATCATTGTTTGGAAAGATTTGTCTTGTTTATATGCTTGATTTTGTTGTTAGTTTCAAGAATTTTCATCCTCGGACATGAATGTATTTGTTGCAATCTGTTTTCTAGTTTCAGAGAGCTTACAAACCTCTCTAGGGAGTATTTTGTGGTGGTAGAAGTTGGGAGAAGAGAAAGGATAATGTGGTGTTTGACTTTCTTGTTGCTCTGGAATCTTTTTTGTCCCAAGTTTTAGACTTTTCAGTAGTGCATTGGTAATAATCTCTTTTGGTTTTGAATAGTGTTTGTGCTGTGGTAAAGATTTGGAATCGAGACCATACTTTTTCAATGTAAAAGAGCTTCAATTGTTTGGGATATTGTATTACGTGATCTGGCCAAGAAAGTCAATTTATCCCTTCCGATTTGCAATTTGGTGGTCAGTTTGGCTGATTGTGTGGATGATCTGCAGTTTGTGAAATTTGGAATTACCTGTTGGGCTTTGTGGGAGGATAGAAATAAGATTAATTTTGGTGAGGCTTTGACAACTGTGGAGTACAAATCCGAATGGATACTGCATTATGCGGATGATTTATCAAACATGGCTGAACCTGGAAGGATTTCTGATGGGTCGATGTTGGACAACCTGAGGAGTTGTAGAGGTCTATTGTCTTCCTGGTGTCCACCATACCTTGGTGTGTTCATATTAAAATAATTGACCGTGCTGGTGTATTGTTGTCTTCTTCTATGGGCTTAGGGGAGTAGTAAACCGGGATAATCGTGGTTCTGTTGCGGTGGCTCAAGCGTTGGTGTGCGATGGGTTTTTATCAGCTGAGGCGGGGGAATTGTGCCCCCATCTCAAAGGTCTCAAGCTTGCTGAGGCGTTGGGCTTATAACGATCGAGTGTGGAGATGGATGAGTGAAGAACATTAAGGCGTTGGCTTTTTCTTTCTCTCCTCTTCGAGTTTAAATCTCTTGAATTATTAAAAGGACTTGAGATTGTTGATCTTCACTATGCCCCCAGGAGATGAAACAGTGTTGCCAACAAATTGGCTAAATTTGGGTTTTCTTCAAATTATTGTTGTACTTGGACGAATAGTTATGCCTCCCAGCTTGACACGGTTCTTGAGCTTGAGATGAGATCTCCCATTTTGTATTGTTGATTTGTGTATTTTCCACGTTTCCGGTTAAAGAACTTTTGGTTTTGTATAGACACAATTCTTGAGCTTGCAATGAGATCTTCTATTTTT

mRNA sequence

ATGAATGGAACTTTCGCATCCAGTAGCTTACGCGCTGCGTTTTCGCACTGTGTACAGCAAGTCCGAAGCTATGACTACCATCACTACCTCTGCCTCCTCGAACTTCCCCCTTCTATGAGAAAGGCTGCATTTGCACTCCGAGCATTTAATGTTGAAACATCAAGAGCCATGGACGTTGCTACTGATCCCAGGATAGGTCTTATGCGACTTGTGTGGTGGCAGGAAGCTATTGACAAAATATATGCTAGTAAAAAGATTGAACATCCAATAGCGCAAGCCCTTTCATCTGTGATATCGGAGAACAAAATTAGCAAACTGTGGCTGAAAAGGTCTGTTGAAGCTCGGATTAATGATGCCAGAAGGGAGGACACTGACATTCCAACAGCCATTGATGAACTAGAGAAATATGCCGAAGATACTGCATCAACACTACTCTACATGACCCTTCAGGCTGGTGGTATTAGGTCGACAGCAGCCGATCATGCTGCATCTCATATCGGTAAGGCCAGCGGGCTGCTCTTGTTGCTGAAGTCATTACCATATCATGCTACTCGAAATCGCCATTTTTCTTACATTCCTGTTAAAGTGGCCGAAAATCATGGTTTGTTGGCAAAGGAGGGTGTGCGTTTTGAGATACGCTTGGATTCAAGAGAGAGCCTATGTGATGCAGTTTTTGAAATGGCTTCAGTAGCGAATGCTCATTTGCAAAAAGCTCGAGACTTAGCCGGGACAGTGCCGAGGGAGGCTCTGCCTGTGCTTCTGCAGGCCGTGCCAGCTCAGGTTCTTTTGGATTCTTTAAGGAAAGTACAGTTTGATGTTTTTGACTCAAGATTACAACGTGGAGTTTTGGGTGTTTCTCCTTTGTGGTTTCAAATGAGATTAAAGTGGTCTTCTTGGAGGGGAAAATACTAA

Coding sequence (CDS)

ATGAATGGAACTTTCGCATCCAGTAGCTTACGCGCTGCGTTTTCGCACTGTGTACAGCAAGTCCGAAGCTATGACTACCATCACTACCTCTGCCTCCTCGAACTTCCCCCTTCTATGAGAAAGGCTGCATTTGCACTCCGAGCATTTAATGTTGAAACATCAAGAGCCATGGACGTTGCTACTGATCCCAGGATAGGTCTTATGCGACTTGTGTGGTGGCAGGAAGCTATTGACAAAATATATGCTAGTAAAAAGATTGAACATCCAATAGCGCAAGCCCTTTCATCTGTGATATCGGAGAACAAAATTAGCAAACTGTGGCTGAAAAGGTCTGTTGAAGCTCGGATTAATGATGCCAGAAGGGAGGACACTGACATTCCAACAGCCATTGATGAACTAGAGAAATATGCCGAAGATACTGCATCAACACTACTCTACATGACCCTTCAGGCTGGTGGTATTAGGTCGACAGCAGCCGATCATGCTGCATCTCATATCGGTAAGGCCAGCGGGCTGCTCTTGTTGCTGAAGTCATTACCATATCATGCTACTCGAAATCGCCATTTTTCTTACATTCCTGTTAAAGTGGCCGAAAATCATGGTTTGTTGGCAAAGGAGGGTGTGCGTTTTGAGATACGCTTGGATTCAAGAGAGAGCCTATGTGATGCAGTTTTTGAAATGGCTTCAGTAGCGAATGCTCATTTGCAAAAAGCTCGAGACTTAGCCGGGACAGTGCCGAGGGAGGCTCTGCCTGTGCTTCTGCAGGCCGTGCCAGCTCAGGTTCTTTTGGATTCTTTAAGGAAAGTACAGTTTGATGTTTTTGACTCAAGATTACAACGTGGAGTTTTGGGTGTTTCTCCTTTGTGGTTTCAAATGAGATTAAAGTGGTCTTCTTGGAGGGGAAAATACTAA

Homology

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BLAST of CSPI03G03040 vs. Swiss-Prot
Match: NDUF6_BOVIN (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Bos taurus GN=NDUFAF6 PE=2 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 7.0e-47
Identity = 106/288 (36.81%), Postives = 164/288 (56.94%), Query Frame = 1


Query: 16  HCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSRAMDVATDPRIGLMRLVWWQE 75
           +C++ +R  DY  YLC L LP   R +AFALRAFNVE ++  D  ++  IGLMR+ +W++
Sbjct: 60  YCLELLRKRDYEGYLCSLLLPAESRSSAFALRAFNVELAQIKDSVSEKTIGLMRMQFWKK 119

Query: 76  AIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDARREDTDIPTAIDELEK 135
            +D IY+      P+A  L   +  + ++K WL + ++ R    +  D      I ELE 
Sbjct: 120 TVDDIYSDNPPHQPVAIELWKAVRRHNLTKRWLMKIIDER---EKNLDDKAYRNIQELEN 179

Query: 136 YAEDTASTLLYMTLQAGGIRSTAADHAASHIGKASGLLLLLKSLPYHATRNRHFSYIPVK 195
           YAE+T S+LLY+TL+  GI+   ADHAASHIGKA G++  L++ PYH +R R F  +P+ 
Sbjct: 180 YAENTQSSLLYLTLEILGIKDLHADHAASHIGKAQGIVTCLRATPYHGSRRRVF--LPMD 239

Query: 196 VAENHGLLAKEGVRFEIRLDSRESLCDAVFEMASVANAHLQKARDLAGTVPREALPVLLQ 255
           +   HG+  ++     +R     ++ D V+++AS A+ HL+ AR    ++P +A P  LQ
Sbjct: 240 ICMLHGVSQED----FLRKSQDRNVRDVVYDVASQAHLHLKHARSFHRSIPVKAFPAFLQ 299

Query: 256 AVPAQVLLDSLRKVQFDVFDSRLQRGVLGVSPLWFQMRLKWSSWRGKY 304
            V  +  L  +++V FD+F   LQR           + L   SWR +Y
Sbjct: 300 TVALEDYLKKIQQVDFDLFHPSLQR-----KNTLLPLSLYIQSWRKRY 333

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BLAST of CSPI03G03040 vs. Swiss-Prot
Match: NDUF6_MOUSE (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Mus musculus GN=Ndufaf6 PE=1 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.6e-46
Identity = 101/288 (35.07%), Postives = 168/288 (58.33%), Query Frame = 1


Query: 16  HCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSRAMDVATDPRIGLMRLVWWQE 75
           +C++ +R  DY  YLC L  P   +++A ALRAFNVE ++  D  ++  IGLMR+ +W++
Sbjct: 60  YCLELLRKRDYESYLCSLLFPAECQRSASALRAFNVELAQVKDSVSEKTIGLMRMQFWKK 119

Query: 76  AIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDARREDTDIPTAIDELEK 135
           A++ +Y       P+A  L   + ++ ++K WL R ++ R    +  D     ++ ELE 
Sbjct: 120 AVEDMYCDNPPHQPVAIELWKAVKKHNLTKRWLMRIIDER---EKNLDDKAYRSMQELEN 179

Query: 136 YAEDTASTLLYMTLQAGGIRSTAADHAASHIGKASGLLLLLKSLPYHATRNRHFSYIPVK 195
           YAE+T  +LLY+TL+  G++   ADHAASHIGKA G++  L++ PYH++R + F  +P+ 
Sbjct: 180 YAENTQGSLLYLTLEVLGVKDLHADHAASHIGKAQGIVTCLRATPYHSSRRQVF--LPMD 239

Query: 196 VAENHGLLAKEGVRFEIRLDSRESLCDAVFEMASVANAHLQKARDLAGTVPREALPVLLQ 255
           V   HG+  ++     +R +  +++ D V+++AS A+ HL+ AR    +VP EA P  LQ
Sbjct: 240 VCVQHGVSQED----FLRRNQDKNVRDVVYDIASQAHLHLKHARSFHRSVPAEAFPAFLQ 299

Query: 256 AVPAQVLLDSLRKVQFDVFDSRLQRGVLGVSPLWFQMRLKWSSWRGKY 304
            V  +  L  +++V FD+F   LQ+       +   + L   SWR +Y
Sbjct: 300 TVSLEDYLKKIQRVDFDIFHPSLQQ-----KNMLLPLSLYIQSWRKRY 333

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BLAST of CSPI03G03040 vs. Swiss-Prot
Match: NDUF6_HUMAN (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Homo sapiens GN=NDUFAF6 PE=1 SV=2)

HSP 1 Score: 187.6 bits (475), Expect = 2.0e-46
Identity = 105/288 (36.46%), Postives = 167/288 (57.99%), Query Frame = 1


Query: 16  HCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSRAMDVATDPRIGLMRLVWWQE 75
           +C++ +R  DY  YLC L LP   R + FALRAFNVE ++  D  ++  IGLMR+ +W++
Sbjct: 60  YCLELLRKRDYEGYLCSLLLPAESRSSVFALRAFNVELAQVKDSVSEKTIGLMRMQFWKK 119

Query: 76  AIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDARREDTDIPTAIDELEK 135
            ++ IY       P+A  L   +  + ++K WL + V+ R    +  D      I ELE 
Sbjct: 120 TVEDIYCDNPPHQPVAIELWKAVKRHNLTKRWLMKIVDER---EKNLDDKAYRNIKELEN 179

Query: 136 YAEDTASTLLYMTLQAGGIRSTAADHAASHIGKASGLLLLLKSLPYHATRNRHFSYIPVK 195
           YAE+T S+LLY+TL+  GI+   ADHAASHIGKA G++  L++ PYH +R + F  +P+ 
Sbjct: 180 YAENTQSSLLYLTLEILGIKDLHADHAASHIGKAQGIVTCLRATPYHGSRRKVF--LPMD 239

Query: 196 VAENHGLLAKEGVRFEIRLDSRESLCDAVFEMASVANAHLQKARDLAGTVPREALPVLLQ 255
           +   HG+  ++     +R +  +++ D ++++AS A+ HL+ AR    TVP +A P  LQ
Sbjct: 240 ICMLHGVSQED----FLRRNQDKNVRDVIYDIASQAHLHLKHARSFHKTVPVKAFPAFLQ 299

Query: 256 AVPAQVLLDSLRKVQFDVFDSRLQRGVLGVSPLWFQMRLKWSSWRGKY 304
            V  +  L  +++V FD+F   LQ+    + PL+  ++    SWR  Y
Sbjct: 300 TVSLEDFLKKIQRVDFDIFHPSLQQKNT-LLPLYLYIQ----SWRKTY 333

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BLAST of CSPI03G03040 vs. Swiss-Prot
Match: NDUF6_RAT (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Rattus norvegicus GN=Ndufaf6 PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.0e-46
Identity = 102/288 (35.42%), Postives = 166/288 (57.64%), Query Frame = 1


Query: 16  HCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSRAMDVATDPRIGLMRLVWWQE 75
           +C++ +R  DY  YLC L  P   +++A ALRAFNVE ++  D  ++  IGLMR+ +W++
Sbjct: 60  YCLELLRKRDYESYLCSLLFPAECQRSASALRAFNVELAQVKDSVSEKTIGLMRMQFWRK 119

Query: 76  AIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDARREDTDIPTAIDELEK 135
           A++ ++       P+A  L   +  + ++K WL R ++ R    +  D     +I ELE 
Sbjct: 120 AVEDMFCDNPPHQPVAMELWKAVKRHNLTKRWLLRIIDER---EKNLDDKAYRSIRELET 179

Query: 136 YAEDTASTLLYMTLQAGGIRSTAADHAASHIGKASGLLLLLKSLPYHATRNRHFSYIPVK 195
           YAE+T S+LLY+TL+  G++   ADHAASHIGKA G++  L++ PYH++R + F  +P+ 
Sbjct: 180 YAENTQSSLLYLTLEVLGVKDVHADHAASHIGKAQGIVTCLRATPYHSSRRQVF--LPMD 239

Query: 196 VAENHGLLAKEGVRFEIRLDSRESLCDAVFEMASVANAHLQKARDLAGTVPREALPVLLQ 255
           V   HG+  ++     +R +  +++ D V+++AS A+ HL+ AR     VP EA P  LQ
Sbjct: 240 VCVQHGVSQED----FLRRNQDKNVRDVVYDIASQAHLHLKHARSFHSRVPAEAFPAFLQ 299

Query: 256 AVPAQVLLDSLRKVQFDVFDSRLQRGVLGVSPLWFQMRLKWSSWRGKY 304
            V  +  L  +++V FD+F   LQ+           + L   SWR +Y
Sbjct: 300 TVSLEDYLKKIQRVDFDIFHPSLQQ-----KNTLLPLSLYIQSWRKRY 333

[Close]

BLAST of CSPI03G03040 vs. Swiss-Prot
Match: NDUF6_DROME (NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 homolog OS=Drosophila melanogaster GN=sicily PE=2 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 6.8e-42
Identity = 102/262 (38.93%), Postives = 150/262 (57.25%), Query Frame = 1


Query: 16  HCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSRAMDV-ATDPRIGLMRLVWWQ 75
           HC+  V  YDY +YLC L LP  +R+AAFALRAFNVE SR++     +P+I  MRL +W 
Sbjct: 55  HCMSLVEKYDYENYLCTLLLPRELRRAAFALRAFNVEVSRSVSGHQIEPQIAKMRLKFWH 114

Query: 76  EAIDKIYA-----SKKIEHPIAQALSSVISENKISKLWLKRSVEARINDARREDTDIPTA 135
           ++IDK +      S   + P+ + L   +   K++K++L+R V AR     R  T    +
Sbjct: 115 DSIDKCFEPDSQRSYVEDQPVLRELKHTVGSRKLNKVYLRRLVTAR----ERPPTHAFES 174

Query: 136 IDELEKYAEDTASTLLYMTLQAGGIRSTAADHAASHIGKASGLLLLLKSLPYHATRNRHF 195
           I ELE+Y E T S+LL + L+ GG+R   ADHAASH+GKA G+  LL+S+P      +  
Sbjct: 175 IRELEEYTEQTFSSLLLLLLEVGGVRDLNADHAASHLGKAQGIATLLRSIP--LAGRQQA 234

Query: 196 SYIPVKVAENHGLLAKEGVRFEIRLDSRESLCDAVFEMASVANAHLQKARDLAGTVPREA 255
             IP++V   HG+  +  +R +      + + D +F++AS AN HL+ AR L   VP + 
Sbjct: 235 PCIPLEVLVLHGVSQERIIRSK---SDDKGVEDCIFDVASAANTHLKLARQLHDKVPPQV 294

Query: 256 LPVLLQAVPAQVLLDSLRKVQF 272
             + L AV     L+ LR+  F
Sbjct: 295 RKIFLSAVATDAYLERLRRANF 307

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BLAST of CSPI03G03040 vs. TrEMBL
Match: A0A0A0L2D9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G035320 PE=4 SV=1)

HSP 1 Score: 597.8 bits (1540), Expect = 7.3e-168
Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 1


Query: 1   MNGTFASSSLRAAFSHCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSRAMDVA 60
           MNGTFASSSLRAAFSHCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSRAMDVA
Sbjct: 1   MNGTFASSSLRAAFSHCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSRAMDVA 60

Query: 61  TDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDAR 120
           TDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDAR
Sbjct: 61  TDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDAR 120

Query: 121 REDTDIPTAIDELEKYAEDTASTLLYMTLQAGGIRSTAADHAASHIGKASGLLLLLKSLP 180
           REDTDIPTAIDELEKYAEDTASTLLYMTLQAGGIRSTAADHAASHIGKASGLLLLLKSLP
Sbjct: 121 REDTDIPTAIDELEKYAEDTASTLLYMTLQAGGIRSTAADHAASHIGKASGLLLLLKSLP 180

Query: 181 YHATRNRHFSYIPVKVAENHGLLAKEGVRFEIRLDSRESLCDAVFEMASVANAHLQKARD 240
           YHATRNRHFSYIPVKVAENHGLLAKEGVRFEIRLDSRESLCDAVFEMASVANAHLQKARD
Sbjct: 181 YHATRNRHFSYIPVKVAENHGLLAKEGVRFEIRLDSRESLCDAVFEMASVANAHLQKARD 240

Query: 241 LAGTVPREALPVLLQAVPAQVLLDSLRKVQFDVFDSRLQRGVLGVSPLWFQMRLKWSSWR 300
           LAGTVPREALPVLLQAVPAQVLLDSLRKVQFDVFDSRLQRGVLGVSPLWFQMRLKWSSWR
Sbjct: 241 LAGTVPREALPVLLQAVPAQVLLDSLRKVQFDVFDSRLQRGVLGVSPLWFQMRLKWSSWR 300

Query: 301 GKY 304
           GKY
Sbjct: 301 GKY 303

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BLAST of CSPI03G03040 vs. TrEMBL
Match: A0A067K038_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20766 PE=4 SV=1)

HSP 1 Score: 504.6 bits (1298), Expect = 8.4e-140
Identity = 248/298 (83.22%), Postives = 272/298 (91.28%), Query Frame = 1


Query: 6   ASSSLRAAFSHCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSRAMDVATDPRI 65
           ASSSLRAAFSHCVQQVRSYDYHHYLCLLELPP+MRKAAFALRAFNVET++AMDVA+DPRI
Sbjct: 4   ASSSLRAAFSHCVQQVRSYDYHHYLCLLELPPNMRKAAFALRAFNVETAKAMDVASDPRI 63

Query: 66  GLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDARREDTD 125
           GLMRL+WWQE IDKIYA+K IEHP AQALSSVI ENKI+K WLKRSVEARINDARRE TD
Sbjct: 64  GLMRLLWWQETIDKIYANKLIEHPTAQALSSVILENKITKGWLKRSVEARINDARREVTD 123

Query: 126 IPTAIDELEKYAEDTASTLLYMTLQAGGIRSTAADHAASHIGKASGLLLLLKSLPYHATR 185
           IP  ++ELEKYAEDT ST+LYMTLQAGGIRSTAADH ASH+GKASGLLLLL+SLPYHA+R
Sbjct: 124 IPETLEELEKYAEDTVSTILYMTLQAGGIRSTAADHVASHVGKASGLLLLLRSLPYHASR 183

Query: 186 NRHFSYIPVKVAENHGLLAKEGVRFEIRLDSRESLCDAVFEMASVANAHLQKARDLAGTV 245
           NRHFSYIP +VA  HGLL KEG + EIRLDSRE LCDAVFEMASVAN HLQKAR LAGT+
Sbjct: 184 NRHFSYIPTEVAAKHGLLVKEGGQSEIRLDSREGLCDAVFEMASVANVHLQKARALAGTI 243

Query: 246 PREALPVLLQAVPAQVLLDSLRKVQFDVFDSRLQRGVLGVSPLWFQMRLKWSSWRGKY 304
           P EA PVLL A+PAQVL+DSL KVQFDVFD RL+RGVLG+ PLW+Q++LKW SW+GKY
Sbjct: 244 PAEAQPVLLPAIPAQVLIDSLSKVQFDVFDPRLERGVLGIPPLWYQLKLKWYSWKGKY 301

[Close]

BLAST of CSPI03G03040 vs. TrEMBL
Match: B9N3P4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s07730g PE=4 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 3.0e-137
Identity = 251/303 (82.84%), Postives = 273/303 (90.10%), Query Frame = 1


Query: 1   MNGTFASSSLRAAFSHCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSRAMDVA 60
           MNG  ASSSLR AFS+CVQQVR+YDYHHYLCLLELPP++RKAAFALRAFNVET+RAMDVA
Sbjct: 1   MNG--ASSSLRTAFSYCVQQVRNYDYHHYLCLLELPPNIRKAAFALRAFNVETARAMDVA 60

Query: 61  TDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDAR 120
           +DPRIGLMRL+WWQEAIDKIYA+K IEHP AQALSSVISEN+ISK WLKR VEARINDAR
Sbjct: 61  SDPRIGLMRLLWWQEAIDKIYANKVIEHPAAQALSSVISENRISKGWLKRPVEARINDAR 120

Query: 121 REDTDIPTAIDELEKYAEDTASTLLYMTLQAGGIRSTAADHAASHIGKASGLLLLLKSLP 180
           RE TDIP  I+ELEKYAEDT STLLYMTLQAGGIRSTAADHAASH GKASGLLLLL+SLP
Sbjct: 121 REVTDIPETIEELEKYAEDTISTLLYMTLQAGGIRSTAADHAASHAGKASGLLLLLRSLP 180

Query: 181 YHATRNRHFSYIPVKVAENHGLLAKEGVRFEIRLDSRESLCDAVFEMASVANAHLQKARD 240
           YHA+RNRHF YIP +VA  HGLL KEG RFEIRLDSRESLC+AVF+MASVAN HLQKAR 
Sbjct: 181 YHASRNRHFCYIPTEVAAKHGLLVKEGGRFEIRLDSRESLCNAVFDMASVANVHLQKARS 240

Query: 241 LAGTVPREALPVLLQAVPAQVLLDSLRKVQFDVFDSRLQRGVLGVSPLWFQMRLKWSSWR 300
           LAGTVP EA  VLL AVPAQV LD+L +V FDVFD RL RGVLG+SP+ +Q++LKWSSWR
Sbjct: 241 LAGTVPTEARSVLLPAVPAQVFLDTLSRVHFDVFDPRLARGVLGISPVSYQLKLKWSSWR 300

Query: 301 GKY 304
           GKY
Sbjct: 301 GKY 301

[Close]

BLAST of CSPI03G03040 vs. TrEMBL
Match: A0A067DZI9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022166mg PE=4 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 3.0e-137
Identity = 245/298 (82.21%), Postives = 269/298 (90.27%), Query Frame = 1


Query: 6   ASSSLRAAFSHCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSRAMDVATDPRI 65
           ASSSLRAAFSHCVQQVR+YDYHHYLCLLELPP +RK AFALRAFNVETS+AMD+A+DPRI
Sbjct: 4   ASSSLRAAFSHCVQQVRNYDYHHYLCLLELPPELRKTAFALRAFNVETSKAMDIASDPRI 63

Query: 66  GLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDARREDTD 125
           GLMRLVWW+EAIDKIY  K+IEHP+AQAL+SV+SENKISK WLKRSVEARINDA RE +D
Sbjct: 64  GLMRLVWWKEAIDKIYVRKQIEHPVAQALASVLSENKISKGWLKRSVEARINDANREISD 123

Query: 126 IPTAIDELEKYAEDTASTLLYMTLQAGGIRSTAADHAASHIGKASGLLLLLKSLPYHATR 185
           IP  I++LEKYAEDT STLLY TLQAGGI+S AADHAASHIGKASGLLLLLKSLPYHA+R
Sbjct: 124 IPEKIEDLEKYAEDTVSTLLYTTLQAGGIKSAAADHAASHIGKASGLLLLLKSLPYHASR 183

Query: 186 NRHFSYIPVKVAENHGLLAKEGVRFEIRLDSRESLCDAVFEMASVANAHLQKARDLAGTV 245
           NRHFSYIP +VA NHGLL KEG R EI LDSRE LCDAVFEMASVAN HL KAR+L+G V
Sbjct: 184 NRHFSYIPAEVAANHGLLVKEGGRSEIHLDSREGLCDAVFEMASVANVHLLKARELSGAV 243

Query: 246 PREALPVLLQAVPAQVLLDSLRKVQFDVFDSRLQRGVLGVSPLWFQMRLKWSSWRGKY 304
           P EA PVLL++VPAQVLLDSL +VQFDVFD RL RGVLGVSPLW+ ++LKW SWRGKY
Sbjct: 244 PIEARPVLLESVPAQVLLDSLNRVQFDVFDPRLARGVLGVSPLWYHVKLKWYSWRGKY 301

[Close]

BLAST of CSPI03G03040 vs. TrEMBL
Match: V4TPJ5_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10024149mg PE=4 SV=1)

HSP 1 Score: 495.7 bits (1275), Expect = 3.9e-137
Identity = 244/298 (81.88%), Postives = 269/298 (90.27%), Query Frame = 1


Query: 6   ASSSLRAAFSHCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSRAMDVATDPRI 65
           ASSSLRAAFSHCVQQVR+YDYHHYLCLLELPP +RK AFALRAFNVETS+AMD+A+DPRI
Sbjct: 11  ASSSLRAAFSHCVQQVRNYDYHHYLCLLELPPELRKTAFALRAFNVETSKAMDIASDPRI 70

Query: 66  GLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDARREDTD 125
           GLMRLVWW+EAIDKIY  K+IEHP+AQAL+SV+SENKISK WLKRSVEARINDA RE +D
Sbjct: 71  GLMRLVWWKEAIDKIYVRKQIEHPVAQALASVLSENKISKGWLKRSVEARINDANREISD 130

Query: 126 IPTAIDELEKYAEDTASTLLYMTLQAGGIRSTAADHAASHIGKASGLLLLLKSLPYHATR 185
           IP  I++LEKYAEDT STLLY TLQAGGI+S AADHAASHIGKASGLLLLLKSLPYHA+R
Sbjct: 131 IPEKIEDLEKYAEDTVSTLLYTTLQAGGIKSAAADHAASHIGKASGLLLLLKSLPYHASR 190

Query: 186 NRHFSYIPVKVAENHGLLAKEGVRFEIRLDSRESLCDAVFEMASVANAHLQKARDLAGTV 245
           NRHFSYIP +VA NHGLL KEG R EI LDSRE LCDAVFEMASVAN HL KAR+L+G V
Sbjct: 191 NRHFSYIPAEVAANHGLLVKEGGRSEIHLDSREGLCDAVFEMASVANVHLLKARELSGAV 250

Query: 246 PREALPVLLQAVPAQVLLDSLRKVQFDVFDSRLQRGVLGVSPLWFQMRLKWSSWRGKY 304
           P EA PVLL++VPAQVLLDSL +VQFDVFD RL RGVLG+SPLW+ ++LKW SWRGKY
Sbjct: 251 PIEARPVLLESVPAQVLLDSLNRVQFDVFDPRLARGVLGISPLWYHVKLKWYSWRGKY 308

[Close]

BLAST of CSPI03G03040 vs. TAIR10
Match: AT1G62730.1 (AT1G62730.1 Terpenoid synthases superfamily protein)

HSP 1 Score: 445.7 bits (1145), Expect = 2.3e-125
Identity = 231/305 (75.74%), Postives = 253/305 (82.95%), Query Frame = 1


Query: 1   MNGTFASSSLRAAFSHCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSRAMDVA 60
           MNG   SSSLR+A S+CVQQVR+YDYHHYLCLLELP  MRKAAFALRAFNVET+RAMDVA
Sbjct: 1   MNGG-GSSSLRSALSYCVQQVRNYDYHHYLCLLELPTEMRKAAFALRAFNVETARAMDVA 60

Query: 61  TDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDAR 120
           +DP+IGLMRL+WWQEAIDK+Y  K I HP AQALS  ISE+ ISK WLKRSV+ARI DA+
Sbjct: 61  SDPKIGLMRLLWWQEAIDKLYTKKPINHPAAQALSWAISEHNISKPWLKRSVDARIRDAQ 120

Query: 121 REDTDIPTAIDELEKYAEDTASTLLYMTLQAGGIRSTAADHAASHIGKASGLLLLLKSLP 180
           RE  DIP +I ELEKYAEDT STLLY TLQAGGI ST ADHAASHIGKASGL+LLLKSLP
Sbjct: 121 REVDDIPESIAELEKYAEDTVSTLLYNTLQAGGISSTTADHAASHIGKASGLVLLLKSLP 180

Query: 181 YHATRNRHFSYIPVKVAENHGLLAKEGVRFEIRL--DSRESLCDAVFEMASVANAHLQKA 240
           YH TRNRH SYIP  +AE HGLL K+G R EI L  DSRE L + VFE+ASVANAHL KA
Sbjct: 181 YHCTRNRHQSYIPADLAEKHGLLVKQGGRLEILLDNDSREGLSNVVFEIASVANAHLLKA 240

Query: 241 RDLAGTVPREALPVLLQAVPAQVLLDSLRKVQFDVFDSRLQRGVLGVSPLWFQMRLKWSS 300
           R+LAG VP EA PVLL +VP QVLLDSL KVQFDVFD R+QRGVLGV PL FQ +LKW S
Sbjct: 241 RELAGKVPAEAKPVLLHSVPVQVLLDSLNKVQFDVFDPRIQRGVLGVPPLLFQFKLKWYS 300

Query: 301 WRGKY 304
           WR  +
Sbjct: 301 WRAMF 304

[Close]

BLAST of CSPI03G03040 vs. NCBI nr
Match: gi|449460407|ref|XP_004147937.1| (PREDICTED: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 [Cucumis sativus])

HSP 1 Score: 597.8 bits (1540), Expect = 1.0e-167
Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 1


Query: 1   MNGTFASSSLRAAFSHCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSRAMDVA 60
           MNGTFASSSLRAAFSHCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSRAMDVA
Sbjct: 1   MNGTFASSSLRAAFSHCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSRAMDVA 60

Query: 61  TDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDAR 120
           TDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDAR
Sbjct: 61  TDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDAR 120

Query: 121 REDTDIPTAIDELEKYAEDTASTLLYMTLQAGGIRSTAADHAASHIGKASGLLLLLKSLP 180
           REDTDIPTAIDELEKYAEDTASTLLYMTLQAGGIRSTAADHAASHIGKASGLLLLLKSLP
Sbjct: 121 REDTDIPTAIDELEKYAEDTASTLLYMTLQAGGIRSTAADHAASHIGKASGLLLLLKSLP 180

Query: 181 YHATRNRHFSYIPVKVAENHGLLAKEGVRFEIRLDSRESLCDAVFEMASVANAHLQKARD 240
           YHATRNRHFSYIPVKVAENHGLLAKEGVRFEIRLDSRESLCDAVFEMASVANAHLQKARD
Sbjct: 181 YHATRNRHFSYIPVKVAENHGLLAKEGVRFEIRLDSRESLCDAVFEMASVANAHLQKARD 240

Query: 241 LAGTVPREALPVLLQAVPAQVLLDSLRKVQFDVFDSRLQRGVLGVSPLWFQMRLKWSSWR 300
           LAGTVPREALPVLLQAVPAQVLLDSLRKVQFDVFDSRLQRGVLGVSPLWFQMRLKWSSWR
Sbjct: 241 LAGTVPREALPVLLQAVPAQVLLDSLRKVQFDVFDSRLQRGVLGVSPLWFQMRLKWSSWR 300

Query: 301 GKY 304
           GKY
Sbjct: 301 GKY 303

[Close]

BLAST of CSPI03G03040 vs. NCBI nr
Match: gi|659096039|ref|XP_008448893.1| (PREDICTED: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 [Cucumis melo])

HSP 1 Score: 588.6 bits (1516), Expect = 6.4e-165
Identity = 297/303 (98.02%), Postives = 299/303 (98.68%), Query Frame = 1


Query: 1   MNGTFASSSLRAAFSHCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSRAMDVA 60
           MNGTFASSSLRAAFSHCVQQVRSYDYHHYLCLLELPP+MRKAAFALRAFNVETSRAMDVA
Sbjct: 1   MNGTFASSSLRAAFSHCVQQVRSYDYHHYLCLLELPPAMRKAAFALRAFNVETSRAMDVA 60

Query: 61  TDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDAR 120
           TDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDAR
Sbjct: 61  TDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDAR 120

Query: 121 REDTDIPTAIDELEKYAEDTASTLLYMTLQAGGIRSTAADHAASHIGKASGLLLLLKSLP 180
           REDTDIPT IDELEKYAEDTASTLLYMTLQAGGIRST ADHAASHIGKASGLLLLLKSLP
Sbjct: 121 REDTDIPTTIDELEKYAEDTASTLLYMTLQAGGIRSTTADHAASHIGKASGLLLLLKSLP 180

Query: 181 YHATRNRHFSYIPVKVAENHGLLAKEGVRFEIRLDSRESLCDAVFEMASVANAHLQKARD 240
           YHATRNRHFSYIPVKVAENHGLLAK+GV FEIRLDSRESLCDAVFEMASVANAHLQKARD
Sbjct: 181 YHATRNRHFSYIPVKVAENHGLLAKQGVHFEIRLDSRESLCDAVFEMASVANAHLQKARD 240

Query: 241 LAGTVPREALPVLLQAVPAQVLLDSLRKVQFDVFDSRLQRGVLGVSPLWFQMRLKWSSWR 300
           LAGTVPREALPVLLQAVPAQVLLDSLRKVQFDVFD RLQRGVLGVSPLWFQMRLKWSSWR
Sbjct: 241 LAGTVPREALPVLLQAVPAQVLLDSLRKVQFDVFDPRLQRGVLGVSPLWFQMRLKWSSWR 300

Query: 301 GKY 304
           GKY
Sbjct: 301 GKY 303

[Close]

BLAST of CSPI03G03040 vs. NCBI nr
Match: gi|802741568|ref|XP_012087113.1| (PREDICTED: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 [Jatropha curcas])

HSP 1 Score: 504.6 bits (1298), Expect = 1.2e-139
Identity = 248/298 (83.22%), Postives = 272/298 (91.28%), Query Frame = 1


Query: 6   ASSSLRAAFSHCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSRAMDVATDPRI 65
           ASSSLRAAFSHCVQQVRSYDYHHYLCLLELPP+MRKAAFALRAFNVET++AMDVA+DPRI
Sbjct: 4   ASSSLRAAFSHCVQQVRSYDYHHYLCLLELPPNMRKAAFALRAFNVETAKAMDVASDPRI 63

Query: 66  GLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDARREDTD 125
           GLMRL+WWQE IDKIYA+K IEHP AQALSSVI ENKI+K WLKRSVEARINDARRE TD
Sbjct: 64  GLMRLLWWQETIDKIYANKLIEHPTAQALSSVILENKITKGWLKRSVEARINDARREVTD 123

Query: 126 IPTAIDELEKYAEDTASTLLYMTLQAGGIRSTAADHAASHIGKASGLLLLLKSLPYHATR 185
           IP  ++ELEKYAEDT ST+LYMTLQAGGIRSTAADH ASH+GKASGLLLLL+SLPYHA+R
Sbjct: 124 IPETLEELEKYAEDTVSTILYMTLQAGGIRSTAADHVASHVGKASGLLLLLRSLPYHASR 183

Query: 186 NRHFSYIPVKVAENHGLLAKEGVRFEIRLDSRESLCDAVFEMASVANAHLQKARDLAGTV 245
           NRHFSYIP +VA  HGLL KEG + EIRLDSRE LCDAVFEMASVAN HLQKAR LAGT+
Sbjct: 184 NRHFSYIPTEVAAKHGLLVKEGGQSEIRLDSREGLCDAVFEMASVANVHLQKARALAGTI 243

Query: 246 PREALPVLLQAVPAQVLLDSLRKVQFDVFDSRLQRGVLGVSPLWFQMRLKWSSWRGKY 304
           P EA PVLL A+PAQVL+DSL KVQFDVFD RL+RGVLG+ PLW+Q++LKW SW+GKY
Sbjct: 244 PAEAQPVLLPAIPAQVLIDSLSKVQFDVFDPRLERGVLGIPPLWYQLKLKWYSWKGKY 301

[Close]

BLAST of CSPI03G03040 vs. NCBI nr
Match: gi|568846847|ref|XP_006477254.1| (PREDICTED: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 [Citrus sinensis])

HSP 1 Score: 498.0 bits (1281), Expect = 1.1e-137
Identity = 246/298 (82.55%), Postives = 270/298 (90.60%), Query Frame = 1


Query: 6   ASSSLRAAFSHCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSRAMDVATDPRI 65
           ASSSLRAAFSHCVQQVR+YDYHHYLCLLELPP +RK AFALRAFNVETS+AMD+A+DPRI
Sbjct: 4   ASSSLRAAFSHCVQQVRNYDYHHYLCLLELPPELRKTAFALRAFNVETSKAMDIASDPRI 63

Query: 66  GLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDARREDTD 125
           GLMRLVWW+EAIDKIY  K+IEHP+AQAL+SV+SENKISK WLKRSVEARINDA RE +D
Sbjct: 64  GLMRLVWWKEAIDKIYVRKQIEHPVAQALASVLSENKISKGWLKRSVEARINDANREISD 123

Query: 126 IPTAIDELEKYAEDTASTLLYMTLQAGGIRSTAADHAASHIGKASGLLLLLKSLPYHATR 185
           IP  I++LEKYAEDT STLLY TLQAGGI+STAADHAASHIGKASGLLLLLKSLPYHA+R
Sbjct: 124 IPEKIEDLEKYAEDTVSTLLYTTLQAGGIKSTAADHAASHIGKASGLLLLLKSLPYHASR 183

Query: 186 NRHFSYIPVKVAENHGLLAKEGVRFEIRLDSRESLCDAVFEMASVANAHLQKARDLAGTV 245
           NRHFSYIP +VA NHGLL KEG R EI LDSRE LCDAVFEMASVAN HL KAR+L+G V
Sbjct: 184 NRHFSYIPAEVAANHGLLVKEGGRSEIHLDSREGLCDAVFEMASVANVHLLKARELSGAV 243

Query: 246 PREALPVLLQAVPAQVLLDSLRKVQFDVFDSRLQRGVLGVSPLWFQMRLKWSSWRGKY 304
           P EA PVLL++VPAQVLLDSL +VQFDVFD RL RGVLGVSPLW+ ++LKW SWRGKY
Sbjct: 244 PIEARPVLLESVPAQVLLDSLNRVQFDVFDPRLARGVLGVSPLWYHVKLKWYSWRGKY 301

[Close]

BLAST of CSPI03G03040 vs. NCBI nr
Match: gi|566147795|ref|XP_006368683.1| (hypothetical protein POPTR_0001s07730g [Populus trichocarpa])

HSP 1 Score: 496.1 bits (1276), Expect = 4.3e-137
Identity = 251/303 (82.84%), Postives = 273/303 (90.10%), Query Frame = 1


Query: 1   MNGTFASSSLRAAFSHCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSRAMDVA 60
           MNG  ASSSLR AFS+CVQQVR+YDYHHYLCLLELPP++RKAAFALRAFNVET+RAMDVA
Sbjct: 1   MNG--ASSSLRTAFSYCVQQVRNYDYHHYLCLLELPPNIRKAAFALRAFNVETARAMDVA 60

Query: 61  TDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDAR 120
           +DPRIGLMRL+WWQEAIDKIYA+K IEHP AQALSSVISEN+ISK WLKR VEARINDAR
Sbjct: 61  SDPRIGLMRLLWWQEAIDKIYANKVIEHPAAQALSSVISENRISKGWLKRPVEARINDAR 120

Query: 121 REDTDIPTAIDELEKYAEDTASTLLYMTLQAGGIRSTAADHAASHIGKASGLLLLLKSLP 180
           RE TDIP  I+ELEKYAEDT STLLYMTLQAGGIRSTAADHAASH GKASGLLLLL+SLP
Sbjct: 121 REVTDIPETIEELEKYAEDTISTLLYMTLQAGGIRSTAADHAASHAGKASGLLLLLRSLP 180

Query: 181 YHATRNRHFSYIPVKVAENHGLLAKEGVRFEIRLDSRESLCDAVFEMASVANAHLQKARD 240
           YHA+RNRHF YIP +VA  HGLL KEG RFEIRLDSRESLC+AVF+MASVAN HLQKAR 
Sbjct: 181 YHASRNRHFCYIPTEVAAKHGLLVKEGGRFEIRLDSRESLCNAVFDMASVANVHLQKARS 240

Query: 241 LAGTVPREALPVLLQAVPAQVLLDSLRKVQFDVFDSRLQRGVLGVSPLWFQMRLKWSSWR 300
           LAGTVP EA  VLL AVPAQV LD+L +V FDVFD RL RGVLG+SP+ +Q++LKWSSWR
Sbjct: 241 LAGTVPTEARSVLLPAVPAQVFLDTLSRVHFDVFDPRLARGVLGISPVSYQLKLKWSSWR 300

Query: 301 GKY 304
           GKY
Sbjct: 301 GKY 301

The following BLAST results are available for this feature:

BLAST of CSPI03G03040 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NDUF6_BOVIN	7.0e-47	36.81	NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Bos taurus GN=ND...	[more]
NDUF6_MOUSE	1.6e-46	35.07	NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Mus musculus GN=...	[more]
NDUF6_HUMAN	2.0e-46	36.46	NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Homo sapiens GN=...	[more]
NDUF6_RAT	2.0e-46	35.42	NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 OS=Rattus norvegicu...	[more]
NDUF6_DROME	6.8e-42	38.93	NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 homolog OS=Drosophi...	[more]

BLAST of CSPI03G03040 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2D9_CUCSA	7.3e-168	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G035320 PE=4 SV=1	[more]
A0A067K038_JATCU	8.4e-140	83.22	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20766 PE=4 SV=1	[more]
B9N3P4_POPTR	3.0e-137	82.84	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s07730g PE=4 SV=1	[more]
A0A067DZI9_CITSI	3.0e-137	82.21	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022166mg PE=4 SV=1	[more]
V4TPJ5_9ROSI	3.9e-137	81.88	Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10024149mg PE=...	[more]

BLAST of CSPI03G03040 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G62730.1	2.3e-125	75.74	Terpenoid synthases superfamily protein	[more]

BLAST of CSPI03G03040 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449460407\|ref\|XP_004147937.1\|	1.0e-167	100.00	PREDICTED: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 [Cucumis...	[more]
gi\|659096039\|ref\|XP_008448893.1\|	6.4e-165	98.02	PREDICTED: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 [Cucumis...	[more]
gi\|802741568\|ref\|XP_012087113.1\|	1.2e-139	83.22	PREDICTED: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 [Jatroph...	[more]
gi\|568846847\|ref\|XP_006477254.1\|	1.1e-137	82.55	PREDICTED: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 [Citrus ...	[more]
gi\|566147795\|ref\|XP_006368683.1\|	4.3e-137	82.84	hypothetical protein POPTR_0001s07730g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002060	Squ/phyt_synthse
IPR008949	Isoprenoid_synthase_dom_sf

Vocabulary: **Biological Process**
Term	Definition
GO:0009058	biosynthetic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0016740	transferase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009058	biosynthetic process
biological_process	GO:0006457	protein folding
biological_process	GO:0006626	protein targeting to mitochondrion
biological_process	GO:0009408	response to heat
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0042542	response to hydrogen peroxide
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016740	transferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G03040.1	CSPI03G03040.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002060	Squalene/phytoene synthase	PFAM	PF00494	SQS_PSY	coord: 21..279 score: 2.4
IPR008949	Isoprenoid synthase domain	GENE3D	G3DSA:1.10.600.10		coord: 8..278 score: 1.8
IPR008949	Isoprenoid synthase domain	unknown	SSF48576	Terpenoid synthases	coord: 13..296 score: 2.73
None	No IPR available	PANTHER	PTHR21181	FAMILY NOT NAMED	coord: 1..303 score: 5.3E
None	No IPR available	PANTHER	PTHR21181:SF13	NADH DEHYDROGENASE (UBIQUINONE) COMPLEX I, ASSEMBLY FACTOR 6	coord: 1..303 score: 5.3E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI03G03040	Cla005679	Watermelon (97103) v1	cpiwmB195
CSPI03G03040	Csa3G035320	Cucumber (Chinese Long) v2	cpicuB120
CSPI03G03040	MELO3C013973	Melon (DHL92) v3.5.1	cpimeB240
CSPI03G03040	ClCG10G003030	Watermelon (Charleston Gray)	cpiwcgB190
CSPI03G03040	Lsi07G013340	Bottle gourd (USVL1VR-Ls)	cpilsiB227
CSPI03G03040	MELO3C013973.2	Melon (DHL92) v3.6.1	cpimedB225
CSPI03G03040	CsaV3_3G003070	Cucumber (Chinese Long) v3	cpicucB144
CSPI03G03040	Cla97C10G187560	Watermelon (97103) v2	cpiwmbB184
CSPI03G03040	BhiUN285G19	Wax gourd	cpiwgoB268
CSPI03G03040	Cucsa.320570	Cucumber (Gy14) v1	cgycpiB484
CSPI03G03040	CmaCh16G010540	Cucurbita maxima (Rimu)	cmacpiB333
CSPI03G03040	CmoCh16G011010	Cucurbita moschata (Rifu)	cmocpiB324
CSPI03G03040	Cp4.1LG14g08670	Cucurbita pepo (Zucchini)	cpecpiB216
CSPI03G03040	CsGy3G002970	Cucumber (Gy14) v2	cgybcpiB110
CSPI03G03040	Carg25265	Silver-seed gourd	carcpiB0898

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI03G03040	Watermelon (97103) v2	cpiwmbB180
CSPI03G03040	Wax gourd	cpiwgoB257
CSPI03G03040	Wild cucumber (PI 183967)	cpicpiB115
CSPI03G03040	Cucumber (Gy14) v1	cgycpiB452
CSPI03G03040	Cucurbita maxima (Rimu)	cmacpiB285
CSPI03G03040	Cucurbita maxima (Rimu)	cmacpiB838
CSPI03G03040	Cucurbita moschata (Rifu)	cmocpiB275
CSPI03G03040	Cucurbita moschata (Rifu)	cmocpiB823
CSPI03G03040	Cucumber (Chinese Long) v2	cpicuB140
CSPI03G03040	Melon (DHL92) v3.5.1	cpimeB164
CSPI03G03040	Watermelon (Charleston Gray)	cpiwcgB211
CSPI03G03040	Watermelon (97103) v1	cpiwmB263
CSPI03G03040	Cucurbita pepo (Zucchini)	cpecpiB170
CSPI03G03040	Cucurbita pepo (Zucchini)	cpecpiB852
CSPI03G03040	Bottle gourd (USVL1VR-Ls)	cpilsiB154
CSPI03G03040	Melon (DHL92) v3.6.1	cpimedB153
CSPI03G03040	Cucumber (Gy14) v2	cgybcpiB212
CSPI03G03040	Silver-seed gourd	carcpiB0901
CSPI03G03040	Cucumber (Chinese Long) v3	cpicucB167