CSPI03G03020 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI03G03020
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	NAC domain protein,
Location	Chr3 : 2479357 .. 2481009 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATACAATTCCACATGTTCCTCCAGGCTTTAGATTTCATCCAACAGATGAAGAACTCATTGATTATTATTTGAGGAAAAAAATTTCTTCAAAAAGGATTGATTTGGATGTCATCAAAGATGTTGATCTCTACAAAATTGAGCCATGGGATCTTCAAGGTATGACAAAAGATACCAACCATTCTCTATATAACATGCATATTTTTTTTTTTTCAAACTGGAAAATGAAATTAGATATATTTGAAGAAGATACCCTTTTTTCTTTCTTATCAAGTACATTTCTTTTCTTTTTAGATTTGATCACATGATATAAAGGAAGTTAGGGCATTTACAAATATAGTAACTATTTTTGAAGAAGTGAATTCTATAAGAATGGTGAAATATATAGTTTAGAACTTTCAAATGTAACGACAAATCGAGGCAATGATATTCAATTATTAGATTTGAGATATTGTGGTGGTTATGTTACAGATATATCAACCTAGATAGTTAAGATTATCTTGATGAATCTCCCCGAATTCACAAGGAATTGATTGGCGTGGTTTATATATATTTCTTTTGCTATTAACTTCCTTTTTCATGCATTTTTGTGCTTCCAAGTCCTGAAATTTAATTTGAATTAAGCTTTAAAGATAAAAATTCAGTGATAGCATAAATGGTAGGTCATATAAACAATTTTTGGCATACAATACAACTATTTAGGTCCTGTTTGATAACAATTTTGTTTTTAGTTTCTGTTTTTTTAATTTATTGCTTGTTTTCTCCCTTAAAATTCTTAACGGAGTTCCAAAATCAGAAACAAGTTTTCAGTTTTTATAGTTTCTAAAACTTTGTTTTGTTTTTGAAAACATTGGTAAGTACCAATGTATAACAAAACAAATAAACTTATAAATGTGAGAAAAGATTACAAGCTTAATTAGCTTTAGGTTAAAATTGACCAAATTCCTCAAGTAGACAGATACAAGAAGTTTCATTTGAAAAAAAAGATAGAAAATCAGAACATCTCTACCTAATTAGAATTAATTTGATCAAGGGAAGTGGAACTTTTTTCTTTTAAATAAAATGGTTAAATTTTTGTTTTTCATTCTTGTACTTTTAATAAAAATTTAAATTTGAAGTTATTTAAAGTTAATTTACACAAAAGGAAAACATATTGAGTGATCATTTTTTTCTTCTAAAACTCAAAAACTTATAAAGGTCAAAATTTAAACGTTTGAAAGAATAGATGGAGAAAAATGCTAAACACATACACAGTCTAAAATAATACTTTAACCAAAACAAAATTAATTATACACAAATTCAAATCACTATATCTACATATAGATTATTACATATAATATATATTTGTACATATAGAATTGTGCAGAATGGGAAATGAAGATCAAGAAGATTGGTATTTCTTCAGCCACAAAGACAAGAAATATCCAACAAGCACAAGAACTAATCGAGCTACAAAAGAAGGGTTTTGGAAAGCAACAGGAAGAGACAAGGCTATTTACTCAAGGCATGGCCATGGCTTAATTGGAATGAGAAAAACCCTAGTCTTCTATCGAGGACGAGCCCCCAATGGCCAAAAGTCCGATTGGATCATGCATGAATATAGACTCGAAACAACCGAAAATGGACCTTCCCAGGCAAGTTTACAATCATAA

mRNA sequence

ATGAATACAATTCCACATGTTCCTCCAGGCTTTAGATTTCATCCAACAGATGAAGAACTCATTGATTATTATTTGAGGAAAAAAATTTCTTCAAAAAGGATTGATTTGGATGTCATCAAAGATGTTGATCTCTACAAAATTGAGCCATGGGATCTTCAAGAATTGTGCAGAATGGGAAATGAAGATCAAGAAGATTGGTATTTCTTCAGCCACAAAGACAAGAAATATCCAACAAGCACAAGAACTAATCGAGCTACAAAAGAAGGGTTTTGGAAAGCAACAGGAAGAGACAAGGCTATTTACTCAAGGCATGGCCATGGCTTAATTGGAATGAGAAAAACCCTAGTCTTCTATCGAGGACGAGCCCCCAATGGCCAAAAGTCCGATTGGATCATGCATGAATATAGACTCGAAACAACCGAAAATGGACCTTCCCAGGCAAGTTTACAATCATAA

Coding sequence (CDS)

ATGAATACAATTCCACATGTTCCTCCAGGCTTTAGATTTCATCCAACAGATGAAGAACTCATTGATTATTATTTGAGGAAAAAAATTTCTTCAAAAAGGATTGATTTGGATGTCATCAAAGATGTTGATCTCTACAAAATTGAGCCATGGGATCTTCAAGAATTGTGCAGAATGGGAAATGAAGATCAAGAAGATTGGTATTTCTTCAGCCACAAAGACAAGAAATATCCAACAAGCACAAGAACTAATCGAGCTACAAAAGAAGGGTTTTGGAAAGCAACAGGAAGAGACAAGGCTATTTACTCAAGGCATGGCCATGGCTTAATTGGAATGAGAAAAACCCTAGTCTTCTATCGAGGACGAGCCCCCAATGGCCAAAAGTCCGATTGGATCATGCATGAATATAGACTCGAAACAACCGAAAATGGACCTTCCCAGGCAAGTTTACAATCATAA

Homology

[Close]

BLAST of CSPI03G03020 vs. Swiss-Prot
Match: NAC7_ARATH (NAC domain-containing protein 7 OS=Arabidopsis thaliana GN=NAC007 PE=1 SV=2)

HSP 1 Score: 268.5 bits (685), Expect = 4.6e-71
Identity = 121/146 (82.88%), Postives = 133/146 (91.10%), Query Frame = 1


Query: 1   MNTIPHVPPGFRFHPTDEELIDYYLRKKISSKRIDLDVIKDVDLYKIEPWDLQELCRMGN 60
           MN+  HVPPGFRFHPTDEEL+DYYLRKK++SKRI++D IKD+DLYKIEPWDLQELC++G+
Sbjct: 1   MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIEIDFIKDIDLYKIEPWDLQELCKIGH 60

Query: 61  EDQEDWYFFSHKDKKYPTSTRTNRATKEGFWKATGRDKAIYSRHGHGLIGMRKTLVFYRG 120
           E+Q DWYFFSHKDKKYPT TRTNRATK GFWKATGRDKAIY R  H LIGMRKTLVFY+G
Sbjct: 61  EEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYLR--HSLIGMRKTLVFYKG 120

Query: 121 RAPNGQKSDWIMHEYRLETTENGPSQ 147
           RAPNGQKSDWIMHEYRLET ENG  Q
Sbjct: 121 RAPNGQKSDWIMHEYRLETDENGTPQ 144

[Close]

BLAST of CSPI03G03020 vs. Swiss-Prot
Match: NAC26_ARATH (NAC domain-containing protein 26 OS=Arabidopsis thaliana GN=NAC026 PE=1 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 1.5e-69
Identity = 120/146 (82.19%), Postives = 133/146 (91.10%), Query Frame = 1


Query: 1   MNTIPHVPPGFRFHPTDEELIDYYLRKKISSKRIDLDVIKDVDLYKIEPWDLQELCRMGN 60
           MN+   VPPGFRFHPTDEEL+DYYLRKK++SKRI++D+IKDVDLYKIEP DLQELC++GN
Sbjct: 1   MNSFSQVPPGFRFHPTDEELVDYYLRKKVASKRIEIDIIKDVDLYKIEPCDLQELCKIGN 60

Query: 61  EDQEDWYFFSHKDKKYPTSTRTNRATKEGFWKATGRDKAIYSRHGHGLIGMRKTLVFYRG 120
           E+Q +WYFFSHKDKKYPT TRTNRATK GFWKATGRDKAIY R  H LIGMRKTLVFY+G
Sbjct: 61  EEQSEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYIR--HSLIGMRKTLVFYKG 120

Query: 121 RAPNGQKSDWIMHEYRLETTENGPSQ 147
           RAPNGQKSDWIMHEYRLET+ENG  Q
Sbjct: 121 RAPNGQKSDWIMHEYRLETSENGTPQ 144

[Close]

BLAST of CSPI03G03020 vs. Swiss-Prot
Match: NAC37_ARATH (NAC domain-containing protein 37 OS=Arabidopsis thaliana GN=NAC037 PE=1 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.2e-63
Identity = 110/140 (78.57%), Postives = 125/140 (89.29%), Query Frame = 1


Query: 7   VPPGFRFHPTDEELIDYYLRKKISSKRIDLDVIKDVDLYKIEPWDLQELCRMGNEDQEDW 66
           VPPGFRFHPTDEEL+ YYLRKKI+S++IDLDVI+D+DLY+IEPWDLQE CR+G E+Q +W
Sbjct: 9   VPPGFRFHPTDEELVGYYLRKKIASQKIDLDVIRDIDLYRIEPWDLQEQCRIGYEEQNEW 68

Query: 67  YFFSHKDKKYPTSTRTNRATKEGFWKATGRDKAIYSRHGHGLIGMRKTLVFYRGRAPNGQ 126
           YFFSHKDKKYPT TRTNRAT  GFWKATGRDKA+Y +    LIGMRKTLVFY+GRAPNG+
Sbjct: 69  YFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDK--TKLIGMRKTLVFYKGRAPNGK 128

Query: 127 KSDWIMHEYRLETTENGPSQ 147
           KSDWIMHEYRLE+ EN P Q
Sbjct: 129 KSDWIMHEYRLESDENAPPQ 146

[Close]

BLAST of CSPI03G03020 vs. Swiss-Prot
Match: NAC76_ARATH (NAC domain-containing protein 76 OS=Arabidopsis thaliana GN=NAC076 PE=1 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 2.7e-63
Identity = 108/140 (77.14%), Postives = 125/140 (89.29%), Query Frame = 1


Query: 7   VPPGFRFHPTDEELIDYYLRKKISSKRIDLDVIKDVDLYKIEPWDLQELCRMGNEDQEDW 66
           VPPGFRFHPTDEEL+ YYLRKK++S++IDLDVI+D+DLY+IEPWDLQE CR+G E++ +W
Sbjct: 10  VPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIRDIDLYRIEPWDLQESCRIGYEERNEW 69

Query: 67  YFFSHKDKKYPTSTRTNRATKEGFWKATGRDKAIYSRHGHGLIGMRKTLVFYRGRAPNGQ 126
           YFFSHKDKKYPT TRTNRAT  GFWKATGRDKA+Y +    LIGMRKTLVFY+GRAPNGQ
Sbjct: 70  YFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDK--SKLIGMRKTLVFYKGRAPNGQ 129

Query: 127 KSDWIMHEYRLETTENGPSQ 147
           K+DWIMHEYRLE+ EN P Q
Sbjct: 130 KTDWIMHEYRLESDENAPPQ 147

[Close]

BLAST of CSPI03G03020 vs. Swiss-Prot
Match: NC101_ARATH (NAC domain-containing protein 101 OS=Arabidopsis thaliana GN=NAC101 PE=2 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 3.5e-63
Identity = 107/144 (74.31%), Postives = 124/144 (86.11%), Query Frame = 1


Query: 1   MNTIPHVPPGFRFHPTDEELIDYYLRKKISSKRIDLDVIKDVDLYKIEPWDLQELCRMGN 60
           M ++ H+PPG+RFHPTDEEL+DYYL+ K++   + +DVIKDVDLYKIEPWD+QELC  G 
Sbjct: 1   MESLAHIPPGYRFHPTDEELVDYYLKNKVAFPGMQVDVIKDVDLYKIEPWDIQELCGRGT 60

Query: 61  EDQEDWYFFSHKDKKYPTSTRTNRATKEGFWKATGRDKAIYSRHGHGLIGMRKTLVFYRG 120
            ++ +WYFFSHKDKKYPT TRTNRAT  GFWKATGRDKAIYS+    L+GMRKTLVFY+G
Sbjct: 61  GEEREWYFFSHKDKKYPTGTRTNRATGSGFWKATGRDKAIYSK--QELVGMRKTLVFYKG 120

Query: 121 RAPNGQKSDWIMHEYRLETTENGP 145
           RAPNGQKSDWIMHEYRLET ENGP
Sbjct: 121 RAPNGQKSDWIMHEYRLETDENGP 142

[Close]

BLAST of CSPI03G03020 vs. TrEMBL
Match: A0A0A0L6Z7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G034810 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 4.7e-83
Identity = 145/146 (99.32%), Postives = 146/146 (100.00%), Query Frame = 1


Query: 1   MNTIPHVPPGFRFHPTDEELIDYYLRKKISSKRIDLDVIKDVDLYKIEPWDLQELCRMGN 60
           MNTIPHVPPGFRFHPTDEELIDYYLRKKISSK+IDLDVIKDVDLYKIEPWDLQELCRMGN
Sbjct: 1   MNTIPHVPPGFRFHPTDEELIDYYLRKKISSKKIDLDVIKDVDLYKIEPWDLQELCRMGN 60

Query: 61  EDQEDWYFFSHKDKKYPTSTRTNRATKEGFWKATGRDKAIYSRHGHGLIGMRKTLVFYRG 120
           EDQEDWYFFSHKDKKYPTSTRTNRATKEGFWKATGRDKAIYSRHGHGLIGMRKTLVFYRG
Sbjct: 61  EDQEDWYFFSHKDKKYPTSTRTNRATKEGFWKATGRDKAIYSRHGHGLIGMRKTLVFYRG 120

Query: 121 RAPNGQKSDWIMHEYRLETTENGPSQ 147
           RAPNGQKSDWIMHEYRLETTENGPSQ
Sbjct: 121 RAPNGQKSDWIMHEYRLETTENGPSQ 146

[Close]

BLAST of CSPI03G03020 vs. TrEMBL
Match: U5GRG8_POPTR (No apical meristem family protein OS=Populus trichocarpa GN=POPTR_0001s00220g PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 8.4e-72
Identity = 127/147 (86.39%), Postives = 135/147 (91.84%), Query Frame = 1


Query: 1   MNTIPHVPPGFRFHPTDEELIDYYLRKKISSKRIDLDVIKDVDLYKIEPWDLQELCRMGN 60
           MNT  HVPPGFRFHPTDEEL+DYYLRKK++SKRIDLDVIKDVDLYKIEPWDLQELC++G 
Sbjct: 1   MNTFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKLGT 60

Query: 61  EDQEDWYFFSHKDKKYPTSTRTNRATKEGFWKATGRDKAIYSRHGHGLIGMRKTLVFYRG 120
           EDQ +WYFFSHKDKKYPT TRTNRATK GFWKATGRDKAIYSR  H L+GMRKTLVFY+G
Sbjct: 61  EDQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSR--HSLVGMRKTLVFYKG 120

Query: 121 RAPNGQKSDWIMHEYRLETTENGPSQA 148
           RAPNGQKSDWIMHEYRLET ENG  QA
Sbjct: 121 RAPNGQKSDWIMHEYRLETNENGIPQA 145

[Close]

BLAST of CSPI03G03020 vs. TrEMBL
Match: B9N3P6_POPTR (Wood-associated NAC domain transcription factor 4A OS=Populus trichocarpa GN=WND4A PE=2 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 8.4e-72
Identity = 127/147 (86.39%), Postives = 135/147 (91.84%), Query Frame = 1


Query: 1   MNTIPHVPPGFRFHPTDEELIDYYLRKKISSKRIDLDVIKDVDLYKIEPWDLQELCRMGN 60
           MNT  HVPPGFRFHPTDEEL+DYYLRKK++SKRIDLDVIKDVDLYKIEPWDLQELC++G 
Sbjct: 1   MNTFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKLGT 60

Query: 61  EDQEDWYFFSHKDKKYPTSTRTNRATKEGFWKATGRDKAIYSRHGHGLIGMRKTLVFYRG 120
           EDQ +WYFFSHKDKKYPT TRTNRATK GFWKATGRDKAIYSR  H L+GMRKTLVFY+G
Sbjct: 61  EDQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSR--HSLVGMRKTLVFYKG 120

Query: 121 RAPNGQKSDWIMHEYRLETTENGPSQA 148
           RAPNGQKSDWIMHEYRLET ENG  QA
Sbjct: 121 RAPNGQKSDWIMHEYRLETNENGIPQA 145

[Close]

BLAST of CSPI03G03020 vs. TrEMBL
Match: W9R240_9ROSA (NAC domain-containing protein 7 OS=Morus notabilis GN=L484_019008 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.1e-71
Identity = 128/147 (87.07%), Postives = 135/147 (91.84%), Query Frame = 1


Query: 1   MNTIPHVPPGFRFHPTDEELIDYYLRKKISSKRIDLDVIKDVDLYKIEPWDLQELCRMGN 60
           MNT  HVPPGFRFHPTDEEL+DYYLRKKI+SKRIDLDVIKDVDLYKIEPWDLQELC++G 
Sbjct: 1   MNTFSHVPPGFRFHPTDEELVDYYLRKKIASKRIDLDVIKDVDLYKIEPWDLQELCKIGT 60

Query: 61  EDQEDWYFFSHKDKKYPTSTRTNRATKEGFWKATGRDKAIYSRHGHGLIGMRKTLVFYRG 120
           E+Q +WYFFSHKDKKYPT TRTNRATK GFWKATGRDKAIYSR  H LIGMRKTLVFY+G
Sbjct: 61  EEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSR--HNLIGMRKTLVFYKG 120

Query: 121 RAPNGQKSDWIMHEYRLETTENGPSQA 148
           RAPNGQKSDWIMHEYRLET ENG  QA
Sbjct: 121 RAPNGQKSDWIMHEYRLETNENGTPQA 145

[Close]

BLAST of CSPI03G03020 vs. TrEMBL
Match: A0A061GBJ7_THECC (NAC domain protein, IPR003441 isoform 1 OS=Theobroma cacao GN=TCM_016035 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 1.9e-71
Identity = 127/146 (86.99%), Postives = 134/146 (91.78%), Query Frame = 1


Query: 1   MNTIPHVPPGFRFHPTDEELIDYYLRKKISSKRIDLDVIKDVDLYKIEPWDLQELCRMGN 60
           MNT  HVPPGFRFHPTDEEL+DYYLRKK++SKRIDLDVIKDVDLYKIEPWDLQELCR+G 
Sbjct: 1   MNTFTHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCRIGT 60

Query: 61  EDQEDWYFFSHKDKKYPTSTRTNRATKEGFWKATGRDKAIYSRHGHGLIGMRKTLVFYRG 120
           E+Q +WYFFSHKDKKYPT TRTNRATK GFWKATGRDKAIYSR  H LIGMRKTLVFY+G
Sbjct: 61  EEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSR--HSLIGMRKTLVFYKG 120

Query: 121 RAPNGQKSDWIMHEYRLETTENGPSQ 147
           RAPNGQKSDWIMHEYRLET ENG  Q
Sbjct: 121 RAPNGQKSDWIMHEYRLETNENGTPQ 144

[Close]

BLAST of CSPI03G03020 vs. TAIR10
Match: AT1G12260.1 (AT1G12260.1 NAC 007)

HSP 1 Score: 268.5 bits (685), Expect = 2.6e-72
Identity = 121/146 (82.88%), Postives = 133/146 (91.10%), Query Frame = 1


Query: 1   MNTIPHVPPGFRFHPTDEELIDYYLRKKISSKRIDLDVIKDVDLYKIEPWDLQELCRMGN 60
           MN+  HVPPGFRFHPTDEEL+DYYLRKK++SKRI++D IKD+DLYKIEPWDLQELC++G+
Sbjct: 1   MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIEIDFIKDIDLYKIEPWDLQELCKIGH 60

Query: 61  EDQEDWYFFSHKDKKYPTSTRTNRATKEGFWKATGRDKAIYSRHGHGLIGMRKTLVFYRG 120
           E+Q DWYFFSHKDKKYPT TRTNRATK GFWKATGRDKAIY R  H LIGMRKTLVFY+G
Sbjct: 61  EEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYLR--HSLIGMRKTLVFYKG 120

Query: 121 RAPNGQKSDWIMHEYRLETTENGPSQ 147
           RAPNGQKSDWIMHEYRLET ENG  Q
Sbjct: 121 RAPNGQKSDWIMHEYRLETDENGTPQ 144

[Close]

BLAST of CSPI03G03020 vs. TAIR10
Match: AT1G62700.1 (AT1G62700.1 Arabidopsis NAC domain containing protein 26)

HSP 1 Score: 263.5 bits (672), Expect = 8.3e-71
Identity = 120/146 (82.19%), Postives = 133/146 (91.10%), Query Frame = 1


Query: 1   MNTIPHVPPGFRFHPTDEELIDYYLRKKISSKRIDLDVIKDVDLYKIEPWDLQELCRMGN 60
           MN+   VPPGFRFHPTDEEL+DYYLRKK++SKRI++D+IKDVDLYKIEP DLQELC++GN
Sbjct: 1   MNSFSQVPPGFRFHPTDEELVDYYLRKKVASKRIEIDIIKDVDLYKIEPCDLQELCKIGN 60

Query: 61  EDQEDWYFFSHKDKKYPTSTRTNRATKEGFWKATGRDKAIYSRHGHGLIGMRKTLVFYRG 120
           E+Q +WYFFSHKDKKYPT TRTNRATK GFWKATGRDKAIY R  H LIGMRKTLVFY+G
Sbjct: 61  EEQSEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYIR--HSLIGMRKTLVFYKG 120

Query: 121 RAPNGQKSDWIMHEYRLETTENGPSQ 147
           RAPNGQKSDWIMHEYRLET+ENG  Q
Sbjct: 121 RAPNGQKSDWIMHEYRLETSENGTPQ 144

[Close]

BLAST of CSPI03G03020 vs. TAIR10
Match: AT2G18060.1 (AT2G18060.1 vascular related NAC-domain protein 1)

HSP 1 Score: 243.8 bits (621), Expect = 6.8e-65
Identity = 110/140 (78.57%), Postives = 125/140 (89.29%), Query Frame = 1


Query: 7   VPPGFRFHPTDEELIDYYLRKKISSKRIDLDVIKDVDLYKIEPWDLQELCRMGNEDQEDW 66
           VPPGFRFHPTDEEL+ YYLRKKI+S++IDLDVI+D+DLY+IEPWDLQE CR+G E+Q +W
Sbjct: 9   VPPGFRFHPTDEELVGYYLRKKIASQKIDLDVIRDIDLYRIEPWDLQEQCRIGYEEQNEW 68

Query: 67  YFFSHKDKKYPTSTRTNRATKEGFWKATGRDKAIYSRHGHGLIGMRKTLVFYRGRAPNGQ 126
           YFFSHKDKKYPT TRTNRAT  GFWKATGRDKA+Y +    LIGMRKTLVFY+GRAPNG+
Sbjct: 69  YFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDK--TKLIGMRKTLVFYKGRAPNGK 128

Query: 127 KSDWIMHEYRLETTENGPSQ 147
           KSDWIMHEYRLE+ EN P Q
Sbjct: 129 KSDWIMHEYRLESDENAPPQ 146

[Close]

BLAST of CSPI03G03020 vs. TAIR10
Match: AT4G36160.1 (AT4G36160.1 NAC domain containing protein 76)

HSP 1 Score: 242.7 bits (618), Expect = 1.5e-64
Identity = 108/140 (77.14%), Postives = 125/140 (89.29%), Query Frame = 1


Query: 7   VPPGFRFHPTDEELIDYYLRKKISSKRIDLDVIKDVDLYKIEPWDLQELCRMGNEDQEDW 66
           VPPGFRFHPTDEEL+ YYLRKK++S++IDLDVI+D+DLY+IEPWDLQE CR+G E++ +W
Sbjct: 10  VPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIRDIDLYRIEPWDLQESCRIGYEERNEW 69

Query: 67  YFFSHKDKKYPTSTRTNRATKEGFWKATGRDKAIYSRHGHGLIGMRKTLVFYRGRAPNGQ 126
           YFFSHKDKKYPT TRTNRAT  GFWKATGRDKA+Y +    LIGMRKTLVFY+GRAPNGQ
Sbjct: 70  YFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDK--SKLIGMRKTLVFYKGRAPNGQ 129

Query: 127 KSDWIMHEYRLETTENGPSQ 147
           K+DWIMHEYRLE+ EN P Q
Sbjct: 130 KTDWIMHEYRLESDENAPPQ 147

[Close]

BLAST of CSPI03G03020 vs. TAIR10
Match: AT5G62380.1 (AT5G62380.1 NAC-domain protein 101)

HSP 1 Score: 242.3 bits (617), Expect = 2.0e-64
Identity = 107/144 (74.31%), Postives = 124/144 (86.11%), Query Frame = 1


Query: 1   MNTIPHVPPGFRFHPTDEELIDYYLRKKISSKRIDLDVIKDVDLYKIEPWDLQELCRMGN 60
           M ++ H+PPG+RFHPTDEEL+DYYL+ K++   + +DVIKDVDLYKIEPWD+QELC  G 
Sbjct: 1   MESLAHIPPGYRFHPTDEELVDYYLKNKVAFPGMQVDVIKDVDLYKIEPWDIQELCGRGT 60

Query: 61  EDQEDWYFFSHKDKKYPTSTRTNRATKEGFWKATGRDKAIYSRHGHGLIGMRKTLVFYRG 120
            ++ +WYFFSHKDKKYPT TRTNRAT  GFWKATGRDKAIYS+    L+GMRKTLVFY+G
Sbjct: 61  GEEREWYFFSHKDKKYPTGTRTNRATGSGFWKATGRDKAIYSK--QELVGMRKTLVFYKG 120

Query: 121 RAPNGQKSDWIMHEYRLETTENGP 145
           RAPNGQKSDWIMHEYRLET ENGP
Sbjct: 121 RAPNGQKSDWIMHEYRLETDENGP 142

[Close]

BLAST of CSPI03G03020 vs. NCBI nr
Match: gi|449460483|ref|XP_004147975.1| (PREDICTED: NAC domain-containing protein 7-like [Cucumis sativus])

HSP 1 Score: 315.1 bits (806), Expect = 6.8e-83
Identity = 145/146 (99.32%), Postives = 146/146 (100.00%), Query Frame = 1


Query: 1   MNTIPHVPPGFRFHPTDEELIDYYLRKKISSKRIDLDVIKDVDLYKIEPWDLQELCRMGN 60
           MNTIPHVPPGFRFHPTDEELIDYYLRKKISSK+IDLDVIKDVDLYKIEPWDLQELCRMGN
Sbjct: 1   MNTIPHVPPGFRFHPTDEELIDYYLRKKISSKKIDLDVIKDVDLYKIEPWDLQELCRMGN 60

Query: 61  EDQEDWYFFSHKDKKYPTSTRTNRATKEGFWKATGRDKAIYSRHGHGLIGMRKTLVFYRG 120
           EDQEDWYFFSHKDKKYPTSTRTNRATKEGFWKATGRDKAIYSRHGHGLIGMRKTLVFYRG
Sbjct: 61  EDQEDWYFFSHKDKKYPTSTRTNRATKEGFWKATGRDKAIYSRHGHGLIGMRKTLVFYRG 120

Query: 121 RAPNGQKSDWIMHEYRLETTENGPSQ 147
           RAPNGQKSDWIMHEYRLETTENGPSQ
Sbjct: 121 RAPNGQKSDWIMHEYRLETTENGPSQ 146

[Close]

BLAST of CSPI03G03020 vs. NCBI nr
Match: gi|659096035|ref|XP_008448890.1| (PREDICTED: NAC domain-containing protein 7-like [Cucumis melo])

HSP 1 Score: 310.8 bits (795), Expect = 1.3e-81
Identity = 143/146 (97.95%), Postives = 145/146 (99.32%), Query Frame = 1


Query: 1   MNTIPHVPPGFRFHPTDEELIDYYLRKKISSKRIDLDVIKDVDLYKIEPWDLQELCRMGN 60
           MNTI HVPPGFRFHPTDEELIDYYLRKK+SSKRIDLDVIKDVDLYKIEPWDLQELCRMG+
Sbjct: 1   MNTIQHVPPGFRFHPTDEELIDYYLRKKVSSKRIDLDVIKDVDLYKIEPWDLQELCRMGS 60

Query: 61  EDQEDWYFFSHKDKKYPTSTRTNRATKEGFWKATGRDKAIYSRHGHGLIGMRKTLVFYRG 120
           EDQEDWYFFSHKDKKYPTSTRTNRATKEGFWKATGRDKAIYSRHGHGLIGMRKTLVFYRG
Sbjct: 61  EDQEDWYFFSHKDKKYPTSTRTNRATKEGFWKATGRDKAIYSRHGHGLIGMRKTLVFYRG 120

Query: 121 RAPNGQKSDWIMHEYRLETTENGPSQ 147
           RAPNGQKSDWIMHEYRLETTENGPSQ
Sbjct: 121 RAPNGQKSDWIMHEYRLETTENGPSQ 146

[Close]

BLAST of CSPI03G03020 vs. NCBI nr
Match: gi|312618432|gb|ADR00336.1| (wood-associated NAC domain transcription factor 4A [Populus trichocarpa])

HSP 1 Score: 277.7 bits (709), Expect = 1.2e-71
Identity = 127/147 (86.39%), Postives = 135/147 (91.84%), Query Frame = 1


Query: 1   MNTIPHVPPGFRFHPTDEELIDYYLRKKISSKRIDLDVIKDVDLYKIEPWDLQELCRMGN 60
           MNT  HVPPGFRFHPTDEEL+DYYLRKK++SKRIDLDVIKDVDLYKIEPWDLQELC++G 
Sbjct: 1   MNTFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKLGT 60

Query: 61  EDQEDWYFFSHKDKKYPTSTRTNRATKEGFWKATGRDKAIYSRHGHGLIGMRKTLVFYRG 120
           EDQ +WYFFSHKDKKYPT TRTNRATK GFWKATGRDKAIYSR  H L+GMRKTLVFY+G
Sbjct: 61  EDQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSR--HSLVGMRKTLVFYKG 120

Query: 121 RAPNGQKSDWIMHEYRLETTENGPSQA 148
           RAPNGQKSDWIMHEYRLET ENG  QA
Sbjct: 121 RAPNGQKSDWIMHEYRLETNENGIPQA 145

[Close]

BLAST of CSPI03G03020 vs. NCBI nr
Match: gi|566146301|ref|XP_006368170.1| (no apical meristem family protein [Populus trichocarpa])

HSP 1 Score: 277.7 bits (709), Expect = 1.2e-71
Identity = 127/147 (86.39%), Postives = 135/147 (91.84%), Query Frame = 1


Query: 1   MNTIPHVPPGFRFHPTDEELIDYYLRKKISSKRIDLDVIKDVDLYKIEPWDLQELCRMGN 60
           MNT  HVPPGFRFHPTDEEL+DYYLRKK++SKRIDLDVIKDVDLYKIEPWDLQELC++G 
Sbjct: 1   MNTFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKLGT 60

Query: 61  EDQEDWYFFSHKDKKYPTSTRTNRATKEGFWKATGRDKAIYSRHGHGLIGMRKTLVFYRG 120
           EDQ +WYFFSHKDKKYPT TRTNRATK GFWKATGRDKAIYSR  H L+GMRKTLVFY+G
Sbjct: 61  EDQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSR--HSLVGMRKTLVFYKG 120

Query: 121 RAPNGQKSDWIMHEYRLETTENGPSQA 148
           RAPNGQKSDWIMHEYRLET ENG  QA
Sbjct: 121 RAPNGQKSDWIMHEYRLETNENGIPQA 145

[Close]

BLAST of CSPI03G03020 vs. NCBI nr
Match: gi|703088951|ref|XP_010093669.1| (NAC domain-containing protein 7 [Morus notabilis])

HSP 1 Score: 277.3 bits (708), Expect = 1.6e-71
Identity = 128/147 (87.07%), Postives = 135/147 (91.84%), Query Frame = 1


Query: 1   MNTIPHVPPGFRFHPTDEELIDYYLRKKISSKRIDLDVIKDVDLYKIEPWDLQELCRMGN 60
           MNT  HVPPGFRFHPTDEEL+DYYLRKKI+SKRIDLDVIKDVDLYKIEPWDLQELC++G 
Sbjct: 1   MNTFSHVPPGFRFHPTDEELVDYYLRKKIASKRIDLDVIKDVDLYKIEPWDLQELCKIGT 60

Query: 61  EDQEDWYFFSHKDKKYPTSTRTNRATKEGFWKATGRDKAIYSRHGHGLIGMRKTLVFYRG 120
           E+Q +WYFFSHKDKKYPT TRTNRATK GFWKATGRDKAIYSR  H LIGMRKTLVFY+G
Sbjct: 61  EEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSR--HNLIGMRKTLVFYKG 120

Query: 121 RAPNGQKSDWIMHEYRLETTENGPSQA 148
           RAPNGQKSDWIMHEYRLET ENG  QA
Sbjct: 121 RAPNGQKSDWIMHEYRLETNENGTPQA 145

The following BLAST results are available for this feature:

BLAST of CSPI03G03020 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NAC7_ARATH	4.6e-71	82.88	NAC domain-containing protein 7 OS=Arabidopsis thaliana GN=NAC007 PE=1 SV=2	[more]
NAC26_ARATH	1.5e-69	82.19	NAC domain-containing protein 26 OS=Arabidopsis thaliana GN=NAC026 PE=1 SV=1	[more]
NAC37_ARATH	1.2e-63	78.57	NAC domain-containing protein 37 OS=Arabidopsis thaliana GN=NAC037 PE=1 SV=1	[more]
NAC76_ARATH	2.7e-63	77.14	NAC domain-containing protein 76 OS=Arabidopsis thaliana GN=NAC076 PE=1 SV=1	[more]
NC101_ARATH	3.5e-63	74.31	NAC domain-containing protein 101 OS=Arabidopsis thaliana GN=NAC101 PE=2 SV=1	[more]

BLAST of CSPI03G03020 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6Z7_CUCSA	4.7e-83	99.32	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G034810 PE=4 SV=1	[more]
U5GRG8_POPTR	8.4e-72	86.39	No apical meristem family protein OS=Populus trichocarpa GN=POPTR_0001s00220g PE...	[more]
B9N3P6_POPTR	8.4e-72	86.39	Wood-associated NAC domain transcription factor 4A OS=Populus trichocarpa GN=WND...	[more]
W9R240_9ROSA	1.1e-71	87.07	NAC domain-containing protein 7 OS=Morus notabilis GN=L484_019008 PE=4 SV=1	[more]
A0A061GBJ7_THECC	1.9e-71	86.99	NAC domain protein, IPR003441 isoform 1 OS=Theobroma cacao GN=TCM_016035 PE=4 SV...	[more]

BLAST of CSPI03G03020 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G12260.1	2.6e-72	82.88	NAC 007	[more]
AT1G62700.1	8.3e-71	82.19	Arabidopsis NAC domain containing protein 26	[more]
AT2G18060.1	6.8e-65	78.57	vascular related NAC-domain protein 1	[more]
AT4G36160.1	1.5e-64	77.14	NAC domain containing protein 76	[more]
AT5G62380.1	2.0e-64	74.31	NAC-domain protein 101	[more]

BLAST of CSPI03G03020 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449460483\|ref\|XP_004147975.1\|	6.8e-83	99.32	PREDICTED: NAC domain-containing protein 7-like [Cucumis sativus]	[more]
gi\|659096035\|ref\|XP_008448890.1\|	1.3e-81	97.95	PREDICTED: NAC domain-containing protein 7-like [Cucumis melo]	[more]
gi\|312618432\|gb\|ADR00336.1\|	1.2e-71	86.39	wood-associated NAC domain transcription factor 4A [Populus trichocarpa]	[more]
gi\|566146301\|ref\|XP_006368170.1\|	1.2e-71	86.39	no apical meristem family protein [Populus trichocarpa]	[more]
gi\|703088951\|ref\|XP_010093669.1\|	1.6e-71	87.07	NAC domain-containing protein 7 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003441	NAC-dom

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G03020.1	CSPI03G03020.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 8..137 score: 1.1
IPR003441	NAC domain	PROFILE	PS51005	NAC	coord: 7..151 score: 55
IPR003441	NAC domain	unknown	SSF101941	NAC domain	coord: 5..142 score: 4.58
None	No IPR available	PANTHER	PTHR31989	FAMILY NOT NAMED	coord: 1..147 score: 2.2E
None	No IPR available	PANTHER	PTHR31989:SF3	SUBFAMILY NOT NAMED	coord: 1..147 score: 2.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI03G03020	Cla005677	Watermelon (97103) v1	cpiwmB195
CSPI03G03020	Cla011554	Watermelon (97103) v1	cpiwmB263
CSPI03G03020	Csa5G160180	Cucumber (Chinese Long) v2	cpicuB140
CSPI03G03020	MELO3C005563	Melon (DHL92) v3.5.1	cpimeB164
CSPI03G03020	ClCG01G003780	Watermelon (Charleston Gray)	cpiwcgB211
CSPI03G03020	Lsi09G003920	Bottle gourd (USVL1VR-Ls)	cpilsiB154

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI03G03020	Cucumber (Chinese Long) v3	cpicucB144
CSPI03G03020	Cucumber (Chinese Long) v3	cpicucB167
CSPI03G03020	Watermelon (97103) v2	cpiwmbB180
CSPI03G03020	Watermelon (97103) v2	cpiwmbB184
CSPI03G03020	Wax gourd	cpiwgoB257
CSPI03G03020	Wax gourd	cpiwgoB268
CSPI03G03020	Wild cucumber (PI 183967)	cpicpiB115
CSPI03G03020	Cucumber (Gy14) v1	cgycpiB452
CSPI03G03020	Cucumber (Gy14) v1	cgycpiB484
CSPI03G03020	Cucurbita maxima (Rimu)	cmacpiB285
CSPI03G03020	Cucurbita maxima (Rimu)	cmacpiB333
CSPI03G03020	Cucurbita maxima (Rimu)	cmacpiB838
CSPI03G03020	Cucurbita moschata (Rifu)	cmocpiB275
CSPI03G03020	Cucurbita moschata (Rifu)	cmocpiB324
CSPI03G03020	Cucurbita moschata (Rifu)	cmocpiB823
CSPI03G03020	Cucumber (Chinese Long) v2	cpicuB120
CSPI03G03020	Melon (DHL92) v3.5.1	cpimeB240
CSPI03G03020	Watermelon (Charleston Gray)	cpiwcgB190
CSPI03G03020	Cucurbita pepo (Zucchini)	cpecpiB170
CSPI03G03020	Cucurbita pepo (Zucchini)	cpecpiB216
CSPI03G03020	Cucurbita pepo (Zucchini)	cpecpiB852
CSPI03G03020	Bottle gourd (USVL1VR-Ls)	cpilsiB227
CSPI03G03020	Melon (DHL92) v3.6.1	cpimedB153
CSPI03G03020	Melon (DHL92) v3.6.1	cpimedB225
CSPI03G03020	Cucumber (Gy14) v2	cgybcpiB110
CSPI03G03020	Cucumber (Gy14) v2	cgybcpiB212
CSPI03G03020	Silver-seed gourd	carcpiB0901