CSPI03G02090 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAATTTGCAAATTGGAGCCAACGGATTTTCAGTCTCTAAAAGAAAAAGGAAAACCATTTATAAAAACCTGAAATGGTTTTTCATTTTCTCATTTCTTCTTTAAAAACCAAACCTTCTTCCTTCTTCTCCATTTCTCTCTCCCATGGATTCCTCAAATCCCACCGCCGCTCTTACTAAACCCTGCTTCCTCCCCTCCTCCTCCGCCGCCGACGACGACATGGAACCCGGAATCTCATCTCACACTTTCTTCTCCAGAACCTACCGTTCACGATCTTCCCGTTTCGACGATCCTCTCCCTCTTCCTCATTTCTTGGACTCCTGTTTCCTTTGCCGGAAACCTCTCGGGAACAACACCGATATCTTCATGTACAGGTTCGTTAATCGTTAGTTAGTCCTTCATCTTTTTCCATTTTGGATTCAGGGATTTTTGTATATCAAGGGTTTGACACTGAACAATCTTGTAATGTTTTTTTTATACAGAGGGGACACTCCGTTTTGTAGTGAAGAATGTAGACAAGAACAAATAGAAATAGATGAAATGAAAGAGAAGAAATGGAGGAGATCATCAGCTGCTGCTGTGAAGGCGTTAAGGAATAAAAAAGATCAACAAAGAAGAAGATCTACATCTCCTAATAAATCTTCTCCTCCGTCGGAATACCCTTTCTGTGCCGGCACCGTCGCCGCCGCTTAGGTTTTAAAAGGAACTCATAAAAACAACCCAAAAAAGGAAAAAAAAAAACAGGGAAGAAGAAGAAAAAGAAGAGATGGGGTTTGAGAATCTGCAAAAGGGGGAAGAGATTTATGTGAGATTGATGTGTTTTTCGTTTCCTTTTTTTGGGATTTTTTGTTTTTGAGTTTGGAAAAAACTGAGATCACTCTCTGATTATACATATGGAGTTTTAGGGAAGAGGGTGATTAAATCTGTATCTAAACTATGGATTCTGCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGAGACTGTTTTTTTCTTCTTTTTTTTGGCCCTTAAATCTTTTGGGGTTTGATTTTGAGATATTAGATGATAAATAACATTGAGATTTTACTATATTTCATCAATATTCTCTTAATGGGTGTGTACAA ATGGATTCCTCAAATCCCACCGCCGCTCTTACTAAACCCTGCTTCCTCCCCTCCTCCTCCGCCGCCGACGACGACATGGAACCCGGAATCTCATCTCACACTTTCTTCTCCAGAACCTACCGTTCACGATCTTCCCGTTTCGACGATCCTCTCCCTCTTCCTCATTTCTTGGACTCCTGTTTCCTTTGCCGGAAACCTCTCGGGAACAACACCGATATCTTCATGTACAGAGGGGACACTCCGTTTTGTAGTGAAGAATGTAGACAAGAACAAATAGAAATAGATGAAATGAAAGAGAAGAAATGGAGGAGATCATCAGCTGCTGCTGTGAAGGCGTTAAGGAATAAAAAAGATCAACAAAGAAGAAGATCTACATCTCCTAATAAATCTTCTCCTCCGTCGGAATACCCTTTCTGTGCCGGCACCGTCGCCGCCGCTTAG ATGGATTCCTCAAATCCCACCGCCGCTCTTACTAAACCCTGCTTCCTCCCCTCCTCCTCCGCCGCCGACGACGACATGGAACCCGGAATCTCATCTCACACTTTCTTCTCCAGAACCTACCGTTCACGATCTTCCCGTTTCGACGATCCTCTCCCTCTTCCTCATTTCTTGGACTCCTGTTTCCTTTGCCGGAAACCTCTCGGGAACAACACCGATATCTTCATGTACAGAGGGGACACTCCGTTTTGTAGTGAAGAATGTAGACAAGAACAAATAGAAATAGATGAAATGAAAGAGAAGAAATGGAGGAGATCATCAGCTGCTGCTGTGAAGGCGTTAAGGAATAAAAAAGATCAACAAAGAAGAAGATCTACATCTCCTAATAAATCTTCTCCTCCGTCGGAATACCCTTTCTGTGCCGGCACCGTCGCCGCCGCTTAG
BLAST of CSPI03G02090 vs. Swiss-Prot
Match: MARD1_ARATH (Protein MARD1 OS=Arabidopsis thaliana GN=MARD1 PE=2 SV=2) HSP 1 Score: 55.1 bits (131), Expect = 7.7e-07 Identity = 24/57 (42.11%), Postives = 34/57 (59.65%), Query Frame = 1
BLAST of CSPI03G02090 vs. TrEMBL
Match: A0A0A0L1D2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G016990 PE=4 SV=1) HSP 1 Score: 298.5 bits (763), Expect = 4.4e-78 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 1
BLAST of CSPI03G02090 vs. TrEMBL
Match: A0A061G3Z1_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_015808 PE=4 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 2.1e-27 Identity = 89/177 (50.28%), Postives = 107/177 (60.45%), Query Frame = 1
BLAST of CSPI03G02090 vs. TrEMBL
Match: A0A059CHL7_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_D02144 PE=4 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 1.4e-26 Identity = 84/162 (51.85%), Postives = 101/162 (62.35%), Query Frame = 1
BLAST of CSPI03G02090 vs. TrEMBL
Match: I1K0Z1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G068500 PE=4 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 3.0e-26 Identity = 67/109 (61.47%), Postives = 82/109 (75.23%), Query Frame = 1
BLAST of CSPI03G02090 vs. TrEMBL
Match: A0A0D2R0D6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G190400 PE=4 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 1.5e-25 Identity = 72/145 (49.66%), Postives = 94/145 (64.83%), Query Frame = 1
BLAST of CSPI03G02090 vs. TAIR10
Match: AT4G17670.1 (AT4G17670.1 Protein of unknown function (DUF581)) HSP 1 Score: 109.8 bits (273), Expect = 1.5e-24 Identity = 59/93 (63.44%), Postives = 72/93 (77.42%), Query Frame = 1
BLAST of CSPI03G02090 vs. TAIR10
Match: AT5G47060.1 (AT5G47060.1 Protein of unknown function (DUF581)) HSP 1 Score: 107.1 bits (266), Expect = 9.6e-24 Identity = 60/106 (56.60%), Postives = 70/106 (66.04%), Query Frame = 1
BLAST of CSPI03G02090 vs. TAIR10
Match: AT2G44670.1 (AT2G44670.1 Protein of unknown function (DUF581)) HSP 1 Score: 89.0 bits (219), Expect = 2.7e-18 Identity = 41/65 (63.08%), Postives = 49/65 (75.38%), Query Frame = 1
BLAST of CSPI03G02090 vs. TAIR10
Match: AT1G22160.1 (AT1G22160.1 Protein of unknown function (DUF581)) HSP 1 Score: 65.9 bits (159), Expect = 2.4e-11 Identity = 33/63 (52.38%), Postives = 41/63 (65.08%), Query Frame = 1
BLAST of CSPI03G02090 vs. TAIR10
Match: AT1G78020.1 (AT1G78020.1 Protein of unknown function (DUF581)) HSP 1 Score: 63.9 bits (154), Expect = 9.3e-11 Identity = 33/60 (55.00%), Postives = 36/60 (60.00%), Query Frame = 1
BLAST of CSPI03G02090 vs. NCBI nr
Match: gi|449459028|ref|XP_004147248.1| (PREDICTED: uncharacterized protein LOC101209142 [Cucumis sativus]) HSP 1 Score: 298.5 bits (763), Expect = 6.4e-78 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 1
BLAST of CSPI03G02090 vs. NCBI nr
Match: gi|659095755|ref|XP_008448751.1| (PREDICTED: uncharacterized protein LOC103490823 [Cucumis melo]) HSP 1 Score: 285.4 bits (729), Expect = 5.6e-74 Identity = 138/146 (94.52%), Postives = 143/146 (97.95%), Query Frame = 1
BLAST of CSPI03G02090 vs. NCBI nr
Match: gi|590676039|ref|XP_007039622.1| (Uncharacterized protein TCM_015808 [Theobroma cacao]) HSP 1 Score: 130.2 bits (326), Expect = 3.0e-27 Identity = 89/177 (50.28%), Postives = 107/177 (60.45%), Query Frame = 1
BLAST of CSPI03G02090 vs. NCBI nr
Match: gi|629112917|gb|KCW77877.1| (hypothetical protein EUGRSUZ_D02144, partial [Eucalyptus grandis]) HSP 1 Score: 127.5 bits (319), Expect = 1.9e-26 Identity = 84/162 (51.85%), Postives = 101/162 (62.35%), Query Frame = 1
BLAST of CSPI03G02090 vs. NCBI nr
Match: gi|702325967|ref|XP_010053559.1| (PREDICTED: uncharacterized protein LOC104441977 [Eucalyptus grandis]) HSP 1 Score: 127.5 bits (319), Expect = 1.9e-26 Identity = 84/162 (51.85%), Postives = 101/162 (62.35%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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