CSPI03G01740 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTATTATTATTCTAAAGCAACATGTTTGGTGATAGTGTTCTTTGTTTGTTTCAATTGCAAATTCAATCATGCCTCTGACCCTAATCTTTCAAGAGAAGAAGACTTGGAGATTGAAAGACAACTCAAACTTCTCAATAAACCATTCATCAAAACATACAAGGTAAGCTATATATACGTACATACACTCTTAATTGAAATCTTGAATCGAGATTCGACTTTATATATTAATTAAAATTCTTTTTGTTTTCGATTATGCACAAGTGAAGATTAATAATAAATAATTTAAGAGAAATGAACTACGATGTTTCTTGTTTAATAGACGAAGGAAGGAGATATCATTGATTGTGTCGACATCAACAAACAACCTGCCCTCGATCATCCTTTACTAAAGAATCACAAAGTTCAGGTACATACTCGTATTTGTGATATCCGTTATATTTCGTGTTTTTCTATTTTCAATTTCAACTTTCATTACATTTTAATTAGGAAAATTTCCAGAAGAAAAAAAAGAAAAAAGAAAAATTTTGTTTACAATGTTTTTAGGGAAATTCTTATAGATAGAAAAAAAATTGAAACTATTTACATAATATACCTGTAAAAAAACTAAAATGGGGTGAGAAGAATGTGATTGATTTTGGTGTGTTTTATAAATAGTTCTAATTTTTTTTGTTTTTTTTTTCTCTTTTTGAAAAAAAATCCTTTTAATATGTTTGGAGAGATCTTGAAATAGTTAAAGTCATTAATATTATATTAAAAGAAAATAAAACATGATTTTGATTGTTTTAATTAAACAGTTAATTTAATTTTTGAAAAGTAAAAAGCATGATTTAGAATAATTTTTAATGGAGCAAGATTAAAAGTGATTTTTTAGAATTACTCTCAGGTATCAACCATGTATTCTCTATACAAATTAAAGAAATTGATTAACAATATTATTCAGTATTGACAAATAGAAAATGTAATTAGGTCACGAAAACCATCTTTTTAAAGTTAAAATCTTTATATATATATAATTGTTTAGACTATCATTTACGTTTTAGAAATGTTTTCAAAAACTAAACCAAAATTTTATAACTAGAAAAAGTAATTTATTGAAATTTGTTTTAATTTTTAAAATGGACTAAGAATTCAATTATTTTACTTAAGAAAAATGCAAAATATTGTAAGAAAATAGAGAGAAATTAGTTTTAGTTTTTAAAAATCAAAGTCCTAGTTTTTTGTTTTAAAAAATTGTCTTTATTTTTAAAAAAATTACGTCTTTCTTAACGAGACATTTGAATTTTTAACCTAATATGAAAATAAAATTAAATTTTTGAAAAAAAATGTACATAAATTGTTAAAATATTGCTAGAAAATAGATAATAATAAATATTATGTCTTGATTTGCATTCAAATTATATTATGGTTTTTTTGTCTGATCATTTTTGTTTTGTGATGATAGACTCTACCAAGTGAATTTGTATCTAAATTGTTCAAAGAAGATTCATCTCAATCAAACAATGGGATACTCACAAGTAATAACAACAATGGAGAAGGTTGTCCTGTTGGATTTGTTCCTATTAGAAGAACATTGAAAGAAGATCTAATTAGGTTAAAATCTATATCATCCAACAACAAAAACCAACAATCATCGATGAATCCAGAAGATGATGATCTATCTGGTGATTCTTTTTACGACGCCGTCAGATTTCCTTACTATCAAAACGTAAGTATCCGATCTTTTAATTTCTTGTATGATTTGTTTCTATTTTTTTGGCTAAATTTTATTTGTAAAGATACATACCTTTGAATTTTATTCATGTTTTAAAAGTTACAATATCATTCTTAATAATCCTTTGTATGCTTTTTAAAATTACCATCCTTAAAACTAGATAATTGTTAGATATCGTCACTAAAAGTAAATATGTTTGAAAGTACGTACCATTCTTTTCAAACTTCACAACCCCATCAAGCGTCTTAGTTATGTCACTTCCAAATCGTTCTAGGTTTGTATTTCAAGAATAGTTTTGAAACGTTGCAACTTTGGAAAGAATAATATCATTTTTTTAAAAAAGTAAAGAGTAAAGTTTAAGATATGTTGTTATAGGTTAAGTATGATGAAGGAGCTAATTAAGAATGAGTGTGGTTTCAACGGGTTATTATTCAAAACTAATCATAATCATCGAAACGAATAATGCATATATAGTATTTTGTTATATATATAGTTGCTAACATTTGTATAAATTGTGATTATTATGGAAAGGTTGTTTCTCATTCGTTGATAAAAGCACAATATTATCATGGAGCTAAAGCTCGAATTGCTGTGCACAATGTGAGTTTGAGTGATAATGGTCAATCTTCTTCGGCTAACATATGGGTTCTTGGTGGCTCTGATGATTCTCTTAATGTTCTTATGGCTGGTTGGCAGGTATACACATCTTTCATTTTCCATTTTAACTTTGTCAAATTCTCTTCTTCTTTTTCTCTCTCTATGCAATTCAATATTGGAACTTTTATGTGAATAAGTGATAATCATTTATTTGATCATTATTGGGCGTTTTTTAAAGTTAAGTTTATGAATTAATACTGGTTATAATTAGATAAATTTAAAGTTTTCAATTTCAAAACTAATTGAATAACAAGAGAAAAGTTGTTTATATATATATATATAATATAAACATTTTTTTTTGTAGGAATCGGGGAAAAGGTGAGAAATTCAACTAAACATTTTTTAGATCGTATATAAATAATTTGATAGGTGTAAGTATTTACTTTATTGTGAAATTTGAGTAATTTTTTTTCAACAAATTTAGATTGTCGAGGTTGGATGAATCATATAGAAAAAGTTAGTGAGAAGTTTTTAATTAAAATCTCTTAGCAGTAATGATCGAAAAGAGTTTGCAAGAATAACATAATGATATATGATAATAGAGTCCATGTCGCATACCATTTTTTAAATTGTAAAAATGACAAATTCAAAAGCAGATTACTGTATAAGATTATCGCCAATTATTAGTCATATTGACCTAATTTGCAATATGCAAGAAAAGATGTAATATTAACGGTTTCTTTTCTTTTCTTTTCTTTTTTTTGTCAGGCAATTTTCCATTTATTTAAGTTAATTTACCTTTCAAACAAACAAAATGGGAAGACAAATTTTAAAAATAAAAAACTAAAAACATGATTGTTATTAAAGGATGAAATAATTACAATAATTACAACTTTTTTATAACTTATACTACTAAAATTTAATGAGGATTTTCTTTTTTTGCATTTTAGGTGAATCCAGCTGTAAATGGTGATAATCTCCCTCGAACGTTCGTGTATTGGACGGTAAGTGCATGAATATTTTTTTCATCATAGTTTCATTATTATTAGTCTAATCAAATTGTGACTATTATTAAACGAGAAATTTTGAACCAATTATCAATTGCCTTCATTTACCAAATTAATGAAAAAAATATAAATAATTGAATTTGAGATTAATTAAAAGTTGGCATGTGTGCAAACATAAATTAGCAAATTCTAATGACTAATGACGCCTTGTGTTTTTATCATGATTATTCTGGTCAAATTAAAAATTATTTATTTGATCTAAAGTTCAATTAGACAAAAAAAAATTATTAAACCAAAATGCAAAATGCTAATCATGGATCAACCAAGCCGAAAACCTTGAAACCCATTAAAGAGAATTTTAGAAATTTTTACTCCAAAAGGCTAGAGAGAATTCTTCCAATAACCATAAGATATTCTTCGACACATGTTTGCTCTCTCAAATCAAGTATACACATTTGAAAGTTTTCTTAAAACACAATTAATTACAAATTATATAATATACAACTTCTTTTTTTCTTTAGGTTTTGTTAGTCAAATTTTTGCTTCATCTCTCTAACTCTCAGTTTTGAGTTTAGTTTCTATTTGGTTACTAAATTTCAATAGTATATTACATTATTACTGTTGTAATAGGTTGACACAGGTGCTACAACAGGATGTTACAATATGCTATGTCAAGGATTCGTGTTGGTAAATCCAAATATTCACGTAGGCAGTAGTATTCTTCCAGCCTCCATCTATCAAGGACAACAATATGACTATCAATTTAGTATCGTTCAGGTAATGCAATTATTTTCAAACGATAGCTCATACACATTCAACATATTTTCATTTACATTATTTGCATGAAAAATGTCGATGTCAAGATCTAAATAGATGCTATGGAAATATGAAAGTAGTATAAAAAATTTGGAGATTGATGAATAGCTTCAAGAAATCATTAGAGAATTTATATATAAAAGAAAATTTTAAATTTAACAAAATTGTATTTCATCTTTATTAAAGTAATTAAGTTCAAATTTATCTATAATATTAAATTATAAATTTAGTTCATAAACTCAGGAGAGATTATATCTATTTGATTCTTAATTCTTTCTAAAAAGTTTAAGAACAGTTAGATAATACAATTGAAAATTTATAGTTCTAATTAGACACTATATTCCAATTTATATCTAGGCTAATTAATTTAATTTATATCTTATCAGGCACAAAAAAAATATGTTAAAAGTTAATAACCTATTATTTTAATCTAATATACATTATTAGGCTCGTATTTGTGATATTTTGTTCGTATAGTCACTCATATGTTTAAATATCAATCCATTTGCTTCATTTTGGTCGATGTTCTTTCAAAATATTAAAATTTTAATCTTTTGAACTTTTAAGAATAATCATATTTGAAAAAGATATATAAAAATAAAAGAATAAAGTATTGAACCTTTTTATGGAAAATGAATTTATTTTTTTTACGGTCTTTTGAGCTCCTCTAGCTTCTCTCTTTAAATTAATCGTTTTTATGGAAAGAAATCTTTGGAGCTAGGGTGTGATTAGTGTATCAACTTAGTTGAAATATTTTGATACATCTATTAACTCCTCACCTCCTATCGTATCTTTTTCTAAAAGATAAACCAAAATAAAAATATAGATATTAAACCAACATTAAAAAATGATCTTAAACTCATTTTACGTTACCATAATTTTTCTATAATACAATTCAAATGTGTTGACACTCTCTCTCTATATATCAATATAGAACCTATACAGACATATCGAAAGAAATTTAATATCACAATCATACATAAATTACATGTAGAGTAATTATAACTAGAGATAGCAATTTAAGGGATAATAATCAAGTGTAGAACAATATGTAAAAAAATTCTATAGCCGATAGACTATACTGATATACAGGTTTATCAACGAACAATATATGCTAATATTTTGATTCTAATTGTTGTATTTTGGTATTATTGTCGGTTACACATGTATTTGTTTGATTTGTAGGCTATAGGGCATTGGTGGGTTCGAGTAGGTGATAACCAAGTGGGATTAGGATATTGGCCAAACGAGTTGTTTCCAAATCTACTTAGGGGGGCAGATCAAGTTGCATGGGGAGGCAGGGCACAGCCTACACTATATGGTGATGAAAGCCCTCCATTGGGAAGTGGGCACAAGCCAAATGGTAAACCCGATGAAGCCATTTTCGTTAGGAACATACAATACATAGCACCTAACTACATACTCTCAATACCCACTTTGAACAACACAATAAATTATGTGAGTAACTCTTCCTGTTATGATTTGATCTCTAATGAGAATTGTAGTTTTGATCCCTTCAAATATTGCTTCACTTTTGGAGGCCCAGGTGGGTATGGTTGTGAAGCCTCTACTACTTAA ATGGATTATTATTATTCTAAAGCAACATGTTTGGTGATAGTGTTCTTTGTTTGTTTCAATTGCAAATTCAATCATGCCTCTGACCCTAATCTTTCAAGAGAAGAAGACTTGGAGATTGAAAGACAACTCAAACTTCTCAATAAACCATTCATCAAAACATACAAGACGAAGGAAGGAGATATCATTGATTGTGTCGACATCAACAAACAACCTGCCCTCGATCATCCTTTACTAAAGAATCACAAAGTTCAGACTCTACCAAGTGAATTTGTATCTAAATTGTTCAAAGAAGATTCATCTCAATCAAACAATGGGATACTCACAAGTAATAACAACAATGGAGAAGGTTGTCCTGTTGGATTTGTTCCTATTAGAAGAACATTGAAAGAAGATCTAATTAGGTTAAAATCTATATCATCCAACAACAAAAACCAACAATCATCGATGAATCCAGAAGATGATGATCTATCTGGTGATTCTTTTTACGACGCCGTCAGATTTCCTTACTATCAAAACGTTGTTTCTCATTCGTTGATAAAAGCACAATATTATCATGGAGCTAAAGCTCGAATTGCTGTGCACAATGTGAGTTTGAGTGATAATGGTCAATCTTCTTCGGCTAACATATGGGTTCTTGGTGGCTCTGATGATTCTCTTAATGTTCTTATGGCTGGTTGGCAGGTGAATCCAGCTGTAAATGGTGATAATCTCCCTCGAACGTTCGTGTATTGGACGGTTGACACAGGTGCTACAACAGGATGTTACAATATGCTATGTCAAGGATTCGTGTTGGTAAATCCAAATATTCACGTAGGCAGTAGTATTCTTCCAGCCTCCATCTATCAAGGACAACAATATGACTATCAATTTAGTATCGTTCAGGCTATAGGGCATTGGTGGGTTCGAGTAGGTGATAACCAAGTGGGATTAGGATATTGGCCAAACGAGTTGTTTCCAAATCTACTTAGGGGGGCAGATCAAGTTGCATGGGGAGGCAGGGCACAGCCTACACTATATGGTGATGAAAGCCCTCCATTGGGAAGTGGGCACAAGCCAAATGGTAAACCCGATGAAGCCATTTTCGTTAGGAACATACAATACATAGCACCTAACTACATACTCTCAATACCCACTTTGAACAACACAATAAATTATGTGAGTAACTCTTCCTGTTATGATTTGATCTCTAATGAGAATTGTAGTTTTGATCCCTTCAAATATTGCTTCACTTTTGGAGGCCCAGGTGGGTATGGTTGTGAAGCCTCTACTACTTAA ATGGATTATTATTATTCTAAAGCAACATGTTTGGTGATAGTGTTCTTTGTTTGTTTCAATTGCAAATTCAATCATGCCTCTGACCCTAATCTTTCAAGAGAAGAAGACTTGGAGATTGAAAGACAACTCAAACTTCTCAATAAACCATTCATCAAAACATACAAGACGAAGGAAGGAGATATCATTGATTGTGTCGACATCAACAAACAACCTGCCCTCGATCATCCTTTACTAAAGAATCACAAAGTTCAGACTCTACCAAGTGAATTTGTATCTAAATTGTTCAAAGAAGATTCATCTCAATCAAACAATGGGATACTCACAAGTAATAACAACAATGGAGAAGGTTGTCCTGTTGGATTTGTTCCTATTAGAAGAACATTGAAAGAAGATCTAATTAGGTTAAAATCTATATCATCCAACAACAAAAACCAACAATCATCGATGAATCCAGAAGATGATGATCTATCTGGTGATTCTTTTTACGACGCCGTCAGATTTCCTTACTATCAAAACGTTGTTTCTCATTCGTTGATAAAAGCACAATATTATCATGGAGCTAAAGCTCGAATTGCTGTGCACAATGTGAGTTTGAGTGATAATGGTCAATCTTCTTCGGCTAACATATGGGTTCTTGGTGGCTCTGATGATTCTCTTAATGTTCTTATGGCTGGTTGGCAGGTGAATCCAGCTGTAAATGGTGATAATCTCCCTCGAACGTTCGTGTATTGGACGGTTGACACAGGTGCTACAACAGGATGTTACAATATGCTATGTCAAGGATTCGTGTTGGTAAATCCAAATATTCACGTAGGCAGTAGTATTCTTCCAGCCTCCATCTATCAAGGACAACAATATGACTATCAATTTAGTATCGTTCAGGCTATAGGGCATTGGTGGGTTCGAGTAGGTGATAACCAAGTGGGATTAGGATATTGGCCAAACGAGTTGTTTCCAAATCTACTTAGGGGGGCAGATCAAGTTGCATGGGGAGGCAGGGCACAGCCTACACTATATGGTGATGAAAGCCCTCCATTGGGAAGTGGGCACAAGCCAAATGGTAAACCCGATGAAGCCATTTTCGTTAGGAACATACAATACATAGCACCTAACTACATACTCTCAATACCCACTTTGAACAACACAATAAATTATGTGAGTAACTCTTCCTGTTATGATTTGATCTCTAATGAGAATTGTAGTTTTGATCCCTTCAAATATTGCTTCACTTTTGGAGGCCCAGGTGGGTATGGTTGTGAAGCCTCTACTACTTAA
BLAST of CSPI03G01740 vs. TrEMBL
Match: A0A0A0L400_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G011710 PE=4 SV=1) HSP 1 Score: 581.6 bits (1498), Expect = 7.6e-163 Identity = 273/276 (98.91%), Postives = 274/276 (99.28%), Query Frame = 1
BLAST of CSPI03G01740 vs. TrEMBL
Match: A0A059CIH2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02193 PE=4 SV=1) HSP 1 Score: 288.1 bits (736), Expect = 1.7e-74 Identity = 171/413 (41.40%), Postives = 239/413 (57.87%), Query Frame = 1
BLAST of CSPI03G01740 vs. TrEMBL
Match: A0A0B0MLP0_GOSAR (Pre-mrna-splicing factor rse1 OS=Gossypium arboreum GN=F383_28463 PE=4 SV=1) HSP 1 Score: 255.4 bits (651), Expect = 1.2e-64 Identity = 151/400 (37.75%), Postives = 221/400 (55.25%), Query Frame = 1
BLAST of CSPI03G01740 vs. TrEMBL
Match: C5WW59_SORBI (Putative uncharacterized protein Sb01g004360 OS=Sorghum bicolor GN=Sb01g004360 PE=4 SV=1) HSP 1 Score: 251.9 bits (642), Expect = 1.4e-63 Identity = 153/419 (36.52%), Postives = 225/419 (53.70%), Query Frame = 1
BLAST of CSPI03G01740 vs. TrEMBL
Match: I1GLX0_BRADI (Uncharacterized protein OS=Brachypodium distachyon GN=BRADI_1g04720 PE=4 SV=1) HSP 1 Score: 249.2 bits (635), Expect = 8.9e-63 Identity = 149/400 (37.25%), Postives = 215/400 (53.75%), Query Frame = 1
BLAST of CSPI03G01740 vs. TAIR10
Match: AT1G55360.1 (AT1G55360.1 Protein of Unknown Function (DUF239)) HSP 1 Score: 243.0 bits (619), Expect = 3.2e-64 Identity = 143/408 (35.05%), Postives = 220/408 (53.92%), Query Frame = 1
BLAST of CSPI03G01740 vs. TAIR10
Match: AT5G56530.1 (AT5G56530.1 Protein of Unknown Function (DUF239)) HSP 1 Score: 242.3 bits (617), Expect = 5.5e-64 Identity = 147/392 (37.50%), Postives = 214/392 (54.59%), Query Frame = 1
BLAST of CSPI03G01740 vs. TAIR10
Match: AT3G13510.1 (AT3G13510.1 Protein of Unknown Function (DUF239)) HSP 1 Score: 238.8 bits (608), Expect = 6.1e-63 Identity = 146/413 (35.35%), Postives = 220/413 (53.27%), Query Frame = 1
BLAST of CSPI03G01740 vs. TAIR10
Match: AT5G18460.1 (AT5G18460.1 Protein of Unknown Function (DUF239)) HSP 1 Score: 231.1 bits (588), Expect = 1.3e-60 Identity = 135/387 (34.88%), Postives = 214/387 (55.30%), Query Frame = 1
BLAST of CSPI03G01740 vs. TAIR10
Match: AT2G44240.1 (AT2G44240.1 Protein of Unknown Function (DUF239)) HSP 1 Score: 226.5 bits (576), Expect = 3.1e-59 Identity = 143/412 (34.71%), Postives = 204/412 (49.51%), Query Frame = 1
BLAST of CSPI03G01740 vs. NCBI nr
Match: gi|778688303|ref|XP_011652715.1| (PREDICTED: uncharacterized protein LOC105435061 [Cucumis sativus]) HSP 1 Score: 847.8 bits (2189), Expect = 8.1e-243 Identity = 405/411 (98.54%), Postives = 409/411 (99.51%), Query Frame = 1
BLAST of CSPI03G01740 vs. NCBI nr
Match: gi|700200636|gb|KGN55769.1| (hypothetical protein Csa_3G011710 [Cucumis sativus]) HSP 1 Score: 581.6 bits (1498), Expect = 1.1e-162 Identity = 273/276 (98.91%), Postives = 274/276 (99.28%), Query Frame = 1
BLAST of CSPI03G01740 vs. NCBI nr
Match: gi|659096570|ref|XP_008449166.1| (PREDICTED: uncharacterized protein LOC103491117 [Cucumis melo]) HSP 1 Score: 472.2 bits (1214), Expect = 9.3e-130 Identity = 220/251 (87.65%), Postives = 236/251 (94.02%), Query Frame = 1
BLAST of CSPI03G01740 vs. NCBI nr
Match: gi|629112986|gb|KCW77946.1| (hypothetical protein EUGRSUZ_D02193 [Eucalyptus grandis]) HSP 1 Score: 288.1 bits (736), Expect = 2.5e-74 Identity = 171/413 (41.40%), Postives = 239/413 (57.87%), Query Frame = 1
BLAST of CSPI03G01740 vs. NCBI nr
Match: gi|728819114|gb|KHG03053.1| (pre-mrna-splicing factor rse1 [Gossypium arboreum]) HSP 1 Score: 255.4 bits (651), Expect = 1.8e-64 Identity = 151/400 (37.75%), Postives = 221/400 (55.25%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |