CSPI03G01650 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G01650
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr3 : 1177623 .. 1177869 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTAAAAAAGTCATAAAAACGGTTAACCCTCAACGCCTCTCAAGGGTTCTTCACGTGCCAGTCACGTGGAAGGAAGGGAAGCGAACCGGGTCTAAGAAAACCGCACTATCTGGGGTAAGTACTATTAGTATAATTGTACTATAAGCGCGGAGTTGAGAAAGACGCCGGCTTTTTGAACGATTTAATCGGCGATCTAAAGAAGAAGCCTCTTGGTTCCTTCTTCTCCTCTTCGCTTCTCTGTTAA

mRNA sequence

ATGAGTAAAAAAGTCATAAAAACGGTTAACCCTCAACGCCTCTCAAGGGTTCTTCACGTGCCAGTCACGTGGAAGGAAGGGAAGCGAACCGGGTCTAAGAAAACCGCACTATCTGGGCGCGGAGTTGAGAAAGACGCCGGCTTTTTGAACGATTTAATCGGCGATCTAAAGAAGAAGCCTCTTGGTTCCTTCTTCTCCTCTTCGCTTCTCTGTTAA

Coding sequence (CDS)

ATGAGTAAAAAAGTCATAAAAACGGTTAACCCTCAACGCCTCTCAAGGGTTCTTCACGTGCCAGTCACGTGGAAGGAAGGGAAGCGAACCGGGTCTAAGAAAACCGCACTATCTGGGCGCGGAGTTGAGAAAGACGCCGGCTTTTTGAACGATTTAATCGGCGATCTAAAGAAGAAGCCTCTTGGTTCCTTCTTCTCCTCTTCGCTTCTCTGTTAA
Homology
[Close]
BLAST of CSPI03G01650 vs. TrEMBL
Match: A0A0A0L1V8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G011610 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 6.8e-32
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 1 

Query: 1  MSKKVIKTVNPQRLSRVLHVPVTWKEGKRTGSKKTALSGRGVEKDAGFLNDLIGDLKKKP 60
          MSKKVIKTVNPQRLSRVLHVPVTWKEGKRTGSKKTALSGRGVEKDAGFLNDLIGDLKKKP
Sbjct: 1  MSKKVIKTVNPQRLSRVLHVPVTWKEGKRTGSKKTALSGRGVEKDAGFLNDLIGDLKKKP 60

Query: 61 LGSFFSSSLLC 72
          LGSFFSSSLLC
Sbjct: 61 LGSFFSSSLLC 71

[Close]
BLAST of CSPI03G01650 vs. NCBI nr
Match: gi|700200625|gb|KGN55758.1| (hypothetical protein Csa_3G011610 [Cucumis sativus])

HSP 1 Score: 144.1 bits (362), Expect = 9.8e-32
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 1 

Query: 1  MSKKVIKTVNPQRLSRVLHVPVTWKEGKRTGSKKTALSGRGVEKDAGFLNDLIGDLKKKP 60
          MSKKVIKTVNPQRLSRVLHVPVTWKEGKRTGSKKTALSGRGVEKDAGFLNDLIGDLKKKP
Sbjct: 1  MSKKVIKTVNPQRLSRVLHVPVTWKEGKRTGSKKTALSGRGVEKDAGFLNDLIGDLKKKP 60

Query: 61 LGSFFSSSLLC 72
          LGSFFSSSLLC
Sbjct: 61 LGSFFSSSLLC 71

The following BLAST results are available for this feature:
BLAST of CSPI03G01650 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI03G01650 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L1V8_CUCSA6.8e-32100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G011610 PE=4 SV=1[more]
BLAST of CSPI03G01650 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI03G01650 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700200625|gb|KGN55758.1|9.8e-32100.00hypothetical protein Csa_3G011610 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G01650.1CSPI03G01650.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI03G01650Csa3G011610Cucumber (Chinese Long) v2cpicuB120
CSPI03G01650CsaV3_3G001700Cucumber (Chinese Long) v3cpicucB144
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI03G01650Cucurbita moschata (Rifu)cmocpiB323
CSPI03G01650Cucurbita moschata (Rifu)cmocpiB509
CSPI03G01650Cucurbita moschata (Rifu)cmocpiB597
CSPI03G01650Cucurbita moschata (Rifu)cmocpiB817
CSPI03G01650Cucumber (Chinese Long) v2cpicuB122
CSPI03G01650Melon (DHL92) v3.5.1cpimeB218
CSPI03G01650Melon (DHL92) v3.5.1cpimeB240
CSPI03G01650Watermelon (Charleston Gray)cpiwcgB180
CSPI03G01650Watermelon (Charleston Gray)cpiwcgB190
CSPI03G01650Watermelon (97103) v1cpiwmB184
CSPI03G01650Watermelon (97103) v1cpiwmB200
CSPI03G01650Cucurbita pepo (Zucchini)cpecpiB215
CSPI03G01650Cucurbita pepo (Zucchini)cpecpiB245
CSPI03G01650Cucurbita pepo (Zucchini)cpecpiB720
CSPI03G01650Cucurbita pepo (Zucchini)cpecpiB865
CSPI03G01650Bottle gourd (USVL1VR-Ls)cpilsiB147
CSPI03G01650Bottle gourd (USVL1VR-Ls)cpilsiB227
CSPI03G01650Melon (DHL92) v3.6.1cpimedB213
CSPI03G01650Melon (DHL92) v3.6.1cpimedB225
CSPI03G01650Cucumber (Gy14) v2cgybcpiB110
CSPI03G01650Cucumber (Gy14) v2cgybcpiB113
CSPI03G01650Silver-seed gourdcarcpiB0534
CSPI03G01650Silver-seed gourdcarcpiB0818
CSPI03G01650Silver-seed gourdcarcpiB1001
CSPI03G01650Silver-seed gourdcarcpiB1007
CSPI03G01650Cucumber (Chinese Long) v3cpicucB146
CSPI03G01650Watermelon (97103) v2cpiwmbB184
CSPI03G01650Watermelon (97103) v2cpiwmbB261
CSPI03G01650Wax gourdcpiwgoB239
CSPI03G01650Wax gourdcpiwgoB308
CSPI03G01650Wild cucumber (PI 183967)cpicpiB100
CSPI03G01650Cucumber (Gy14) v1cgycpiB474
CSPI03G01650Cucumber (Gy14) v1cgycpiB484
CSPI03G01650Cucurbita maxima (Rimu)cmacpiB332
CSPI03G01650Cucurbita maxima (Rimu)cmacpiB519
CSPI03G01650Cucurbita maxima (Rimu)cmacpiB608
CSPI03G01650Cucurbita maxima (Rimu)cmacpiB829