CSPI03G01550 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI03G01550
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Glycine-rich protein-2
Location	Chr3 : 1121951 .. 1123157 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATACATTCTAAGGCATCCCTTTTCCGATGGCTATCTCTAAAACTTTATCTTTTGGTTTCCTTTTGCTGGTGAGTTTGGGTTTAGCTTCGGCGGCCCGATCTCTTCTTTCTTACGATATTCCTCCTCATCGATCTGGATATGATAATTATGATCATCCTGTAGTTAACCCTAAAGTAGGATACGAACATGACCGTCGTGATGGATACTACCATGACCGTGACCATCATGATGCACCTTATGGTGGTGGTGCTGGTGGAGGATATGGAGCTGGAGCTGGAGCTGGCTCATCTCTTGGAGGCTCTGGATATGGAAGTGGAGGAGGTGGTGGTTCTGGATATGGAGGTGTAGGAAACCACGAGGTTGGTTATGGTAGTGGTGGAGGGGGTGGATATGGAGCTGGAGTTGGCTCTGACCTTGGTGGTAGCGGATACGGAAGCGGTGGTGGTGGAGGCAGTGGAGGAGGATACGGTGATTTAGGAGGACGTGGAAAAGGGTACGGTAGCGGTGGAGGTGGAGGAAGTGGATATGGAGGTAGAGGAGACCATGGAGTTGGTTATGGAAGTGGTGGAGGTGGAGGATATGGAAGTGGAGTAGGTGGTGGTGCAGGAGTGGTAGACCATGGTGTAGGTTATGGGAGTGGAGGAGGAGGTGGGGCTGGTAGTGGTTATGGTGGTTCCAAAGGATATGGAGGTGGAAGCGGCGGCGGTGGGGGAGCCGGTTATGGTGGTGGAGCACATGGAAGTGGATATGGAAGTGGTGGTGGAGCTGGAAGTGGTGAAGAAGGAGGATATGATGGTGGATATGCACCGTAAACAAAGAAAAGAAAAGAAAAAGCTCAAAGTTTTATGGCTAAAATGAGAATGCTTACCCTAATATCATCAATGTGTGTGTGTGTTAGCAAAAAAAATAATAAAAGAATTTGGGTAAGAAATGTTATATTAATTATCTTTGAGCTTTTAAGTAATTTGAATGTAATATAATATATATAAAAAAAAAAAAGCTAATCCATGTGTTCCAAAGTGAACCAACATGAAGTATATTTTCTCCCTTTGTCATCATGATCATCTTAAACTTGTGGTTATTATGTGGGCTCTCATTATTATTCCAAGATAGCAACGTCGGGATATTCAAATATTTTTCATATGTAATGTCTTAAGACTAAATCACTATGATCTATATGCTTTAATTAAGTTCAAAACTATTTTG

mRNA sequence

ATGGCTATCTCTAAAACTTTATCTTTTGGTTTCCTTTTGCTGGTGAGTTTGGGTTTAGCTTCGGCGGCCCGATCTCTTCTTTCTTACGATATTCCTCCTCATCGATCTGGATATGATAATTATGATCATCCTGTAGTTAACCCTAAAGTAGGATACGAACATGACCGTCGTGATGGATACTACCATGACCGTGACCATCATGATGCACCTTATGGTGGTGGTGCTGGTGGAGGATATGGAGCTGGAGCTGGAGCTGGCTCATCTCTTGGAGGCTCTGGATATGGAAGTGGAGGAGGTGGTGGTTCTGGATATGGAGGTGTAGGAAACCACGAGGTTGGTTATGGTAGTGGTGGAGGGGGTGGATATGGAGCTGGAGTTGGCTCTGACCTTGGTGGTAGCGGATACGGAAGCGGTGGTGGTGGAGGCAGTGGAGGAGGATACGGTGATTTAGGAGGACGTGGAAAAGGGTACGGTAGCGGTGGAGGTGGAGGAAGTGGATATGGAGGTAGAGGAGACCATGGAGTTGGTTATGGAAGTGGTGGAGGTGGAGGATATGGAAGTGGAGTAGGTGGTGGTGCAGGAGTGGTAGACCATGGTGTAGGTTATGGGAGTGGAGGAGGAGGTGGGGCTGGTAGTGGTTATGGTGGTTCCAAAGGATATGGAGGTGGAAGCGGCGGCGGTGGGGGAGCCGGTTATGGTGGTGGAGCACATGGAAGTGGATATGGAAGTGGTGGTGGAGCTGGAAGTGGTGAAGAAGGAGGATATGATGGTGGATATGCACCGTAA

Coding sequence (CDS)

ATGGCTATCTCTAAAACTTTATCTTTTGGTTTCCTTTTGCTGGTGAGTTTGGGTTTAGCTTCGGCGGCCCGATCTCTTCTTTCTTACGATATTCCTCCTCATCGATCTGGATATGATAATTATGATCATCCTGTAGTTAACCCTAAAGTAGGATACGAACATGACCGTCGTGATGGATACTACCATGACCGTGACCATCATGATGCACCTTATGGTGGTGGTGCTGGTGGAGGATATGGAGCTGGAGCTGGAGCTGGCTCATCTCTTGGAGGCTCTGGATATGGAAGTGGAGGAGGTGGTGGTTCTGGATATGGAGGTGTAGGAAACCACGAGGTTGGTTATGGTAGTGGTGGAGGGGGTGGATATGGAGCTGGAGTTGGCTCTGACCTTGGTGGTAGCGGATACGGAAGCGGTGGTGGTGGAGGCAGTGGAGGAGGATACGGTGATTTAGGAGGACGTGGAAAAGGGTACGGTAGCGGTGGAGGTGGAGGAAGTGGATATGGAGGTAGAGGAGACCATGGAGTTGGTTATGGAAGTGGTGGAGGTGGAGGATATGGAAGTGGAGTAGGTGGTGGTGCAGGAGTGGTAGACCATGGTGTAGGTTATGGGAGTGGAGGAGGAGGTGGGGCTGGTAGTGGTTATGGTGGTTCCAAAGGATATGGAGGTGGAAGCGGCGGCGGTGGGGGAGCCGGTTATGGTGGTGGAGCACATGGAAGTGGATATGGAAGTGGTGGTGGAGCTGGAAGTGGTGAAGAAGGAGGATATGATGGTGGATATGCACCGTAA

Homology

[Close]

BLAST of CSPI03G01550 vs. TrEMBL
Match: A0A0A0L1U7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G009540 PE=4 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 6.9e-106
Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 1


Query: 1   MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGY 60
           MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGY
Sbjct: 1   MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGY 60

Query: 61  YHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGGGG 120
           YHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGGGG
Sbjct: 61  YHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGGGG 120

Query: 121 GYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSG 180
           GYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSG
Sbjct: 121 GYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSG 180

Query: 181 GGGGYGSGVGGGAGVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGAHGSG 240
           GGGGYGSGVGGGAGVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGAHGSG
Sbjct: 181 GGGGYGSGVGGGAGVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGAHGSG 240

Query: 241 YGSGGGAGSGEEGGYDGGYAP 262
           YGSGGGAGSGEEGGYDGGYAP
Sbjct: 241 YGSGGGAGSGEEGGYDGGYAP 261

[Close]

BLAST of CSPI03G01550 vs. TrEMBL
Match: Q9ZWM2_CUCSA (Glycine-rich protein-2 (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 1.5e-105
Identity = 260/261 (99.62%), Postives = 261/261 (100.00%), Query Frame = 1


Query: 1   MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGY 60
           MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGY
Sbjct: 1   MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGY 60

Query: 61  YHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGGGG 120
           YHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGGGG
Sbjct: 61  YHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGGGG 120

Query: 121 GYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSG 180
           GYGAGVGSDLGGSGYGSGGGGG+GGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSG
Sbjct: 121 GYGAGVGSDLGGSGYGSGGGGGTGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSG 180

Query: 181 GGGGYGSGVGGGAGVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGAHGSG 240
           GGGGYGSGVGGGAGVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGAHGSG
Sbjct: 181 GGGGYGSGVGGGAGVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGAHGSG 240

Query: 241 YGSGGGAGSGEEGGYDGGYAP 262
           YGSGGGAGSGEEGGYDGGYAP
Sbjct: 241 YGSGGGAGSGEEGGYDGGYAP 261

[Close]

BLAST of CSPI03G01550 vs. TrEMBL
Match: A0A0A0L3Y0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G009550 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.9e-31
Identity = 166/303 (54.79%), Postives = 172/303 (56.77%), Query Frame = 1


Query: 1   MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHR------------------------- 60
           MAI +T SFGFLLLVSLGLASA RSLL+YD P H                          
Sbjct: 10  MAIFRTFSFGFLLLVSLGLASATRSLLTYDPPHHSVYDDHNTKVGYGRDHHDQPYGGGVG 69

Query: 61  ----------SGYDNYDHPVVNPKVGYEHDRRDGYYHDRDHHDAPYGGGAGGGYGAGAGA 120
                     SGY           VGYEHD  DGY  D   HD  YGG AGGGYG GAG 
Sbjct: 70  ASGGYGAGAGSGYGG---------VGYEHDHHDGYERD---HDRSYGGSAGGGYGVGAG- 129

Query: 121 GSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGGGGGYGAGVGSDLGGSGYGSGGGGGSGG 180
            SSLGGSGYG+            +H VGY +GG GGYGAGVGSDLGGSGYGSG GG SG 
Sbjct: 130 -SSLGGSGYGNV-----------DHGVGYSNGGSGGYGAGVGSDLGGSGYGSGNGGASGS 189

Query: 181 GYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSGGGGGYGSGVGGGAGVVDHGVGYGSG 240
           G GDLGGRGKGYG GG GG+GYGGRGDHG              V G   VV         
Sbjct: 190 GNGDLGGRGKGYGRGGVGGNGYGGRGDHG-------------RVVGHDDVV--------- 249

Query: 241 GGGGAGSGYGGSKGYGGGSGGGGGAGYGGGAHGSGYGSGGGA-------GSGEEGGYDGG 262
                   YGGSKGYGGGSG GGGAGY GGA GSGYGSGGGA       GSGEEGGYDGG
Sbjct: 250 --------YGGSKGYGGGSGVGGGAGYSGGASGSGYGSGGGAGSGSGYGGSGEEGGYDGG 257

[Close]

BLAST of CSPI03G01550 vs. TrEMBL
Match: Q9ZWM3_CUCSA (Glycine-rich protein-1 OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.7e-16
Identity = 90/176 (51.14%), Postives = 95/176 (53.98%), Query Frame = 1


Query: 1   MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHR------------------------- 60
           MAI +T SFGFLLLVSLGLASA RSLL+YD P H                          
Sbjct: 10  MAIFRTFSFGFLLLVSLGLASATRSLLTYDPPHHSVYDDHNTKVGYGRDHHDQPYGGGVG 69

Query: 61  ----------SGYDNYDHPVVNPKVGYEHDRRDGYYHDRDHHDAPYGGGAGGGYGAGAGA 120
                     SGY           VGYEHD  DGY  D   HD  YGG AGGGYG GAG 
Sbjct: 70  ASGGYGAGAGSGYGG---------VGYEHDHHDGYERD---HDRSYGGSAGGGYGVGAG- 129

Query: 121 GSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGGGGGYGAGVGSDLGGSGYGSGGGG 142
            SSLGGSGYG+            +H VGY +GG GGYGAGVGSDLGGSGYGSG GG
Sbjct: 130 -SSLGGSGYGNV-----------DHGVGYSNGGSGGYGAGVGSDLGGSGYGSGNGG 160

[Close]

BLAST of CSPI03G01550 vs. TrEMBL
Match: W1NU74_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00002p00219320 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.7e-11
Identity = 151/285 (52.98%), Postives = 164/285 (57.54%), Query Frame = 1


Query: 1   MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGY 60
           MA    LS  FL+L+ LGL SA+R LL        +GY            G       G 
Sbjct: 1   MAKHSCLSAAFLVLLGLGLCSASRVLLGGYGYEGGAGY------------GVGGGSGSGM 60

Query: 61  YHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSG--YGGVGNHEVGYGSGG 120
                 H   YG G GG  GAG GAG    G+GYGSGGGGGSG  YG  G+H VGYGSGG
Sbjct: 61  GSVEGEHGVGYGSGGGGASGAGYGAGGD-HGAGYGSGGGGGSGAGYGAGGDHGVGYGSGG 120

Query: 121 GGGYGAGVGSD-LGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGG--GGSGYGGRGDHGV 180
           G G GAG G+    G GYGSGGGGGSG GYG  G  G GYGSGGG  GG+GYG  G+HG 
Sbjct: 121 GSGGGAGYGAGGEHGGGYGSGGGGGSGSGYGAGGEHGGGYGSGGGSGGGAGYGAGGEHGG 180

Query: 181 GYGSGGGGGYGSGVGGGAGVVDHGVGYGSGGGGGAGSGY------GGSKGYGGGSGGGGG 240
           GYGSGGGGG GSG G G    +HG GYGSGGG G G GY      GG  G GGG GGG G
Sbjct: 181 GYGSGGGGGSGSGYGAGG---EHGGGYGSGGGSGGGGGYGAGGEHGGGYGSGGGGGGGSG 240

Query: 241 AGYG---------GGAHGSGYGSGGGAGS----GEEGGYDGGYAP 262
           +GYG         GG   +GYGSGGGAGS    G  GG  GGY+P
Sbjct: 241 SGYGAGGAAGGGYGGGSAAGYGSGGGAGSGGGYGAGGGGHGGYSP 269

[Close]

BLAST of CSPI03G01550 vs. NCBI nr
Match: gi|778675041|ref|XP_011650342.1| (PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis sativus])

HSP 1 Score: 391.7 bits (1005), Expect = 9.8e-106
Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 1


Query: 1   MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGY 60
           MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGY
Sbjct: 1   MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGY 60

Query: 61  YHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGGGG 120
           YHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGGGG
Sbjct: 61  YHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGGGG 120

Query: 121 GYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSG 180
           GYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSG
Sbjct: 121 GYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSG 180

Query: 181 GGGGYGSGVGGGAGVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGAHGSG 240
           GGGGYGSGVGGGAGVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGAHGSG
Sbjct: 181 GGGGYGSGVGGGAGVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGAHGSG 240

Query: 241 YGSGGGAGSGEEGGYDGGYAP 262
           YGSGGGAGSGEEGGYDGGYAP
Sbjct: 241 YGSGGGAGSGEEGGYDGGYAP 261

[Close]

BLAST of CSPI03G01550 vs. NCBI nr
Match: gi|3810890|dbj|BAA34064.1| (glycine-rich protein-2 [Cucumis sativus])

HSP 1 Score: 390.6 bits (1002), Expect = 2.2e-105
Identity = 260/261 (99.62%), Postives = 261/261 (100.00%), Query Frame = 1


Query: 1   MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGY 60
           MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGY
Sbjct: 1   MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGY 60

Query: 61  YHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGGGG 120
           YHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGGGG
Sbjct: 61  YHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGGGG 120

Query: 121 GYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSG 180
           GYGAGVGSDLGGSGYGSGGGGG+GGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSG
Sbjct: 121 GYGAGVGSDLGGSGYGSGGGGGTGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSG 180

Query: 181 GGGGYGSGVGGGAGVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGAHGSG 240
           GGGGYGSGVGGGAGVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGAHGSG
Sbjct: 181 GGGGYGSGVGGGAGVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGAHGSG 240

Query: 241 YGSGGGAGSGEEGGYDGGYAP 262
           YGSGGGAGSGEEGGYDGGYAP
Sbjct: 241 YGSGGGAGSGEEGGYDGGYAP 261

[Close]

BLAST of CSPI03G01550 vs. NCBI nr
Match: gi|659095612|ref|XP_008448673.1| (PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis melo])

HSP 1 Score: 348.6 bits (893), Expect = 9.5e-93
Identity = 248/265 (93.58%), Postives = 249/265 (93.96%), Query Frame = 1


Query: 1   MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDN-YD-HPVVNPKVGYEHDRRD 60
           MAISKTLSFGFLLLVSLGLASAARSLL YD+PPHRSGYDN YD HPVVNPKVGYEHD  D
Sbjct: 1   MAISKTLSFGFLLLVSLGLASAARSLLYYDMPPHRSGYDNNYDNHPVVNPKVGYEHDHHD 60

Query: 61  GYYHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGG 120
           GYYHDRDHHDAPYGGGAGGGYGAG GAGSSLGGSGYGSGGGGGSGYGGVGNH VGYGSGG
Sbjct: 61  GYYHDRDHHDAPYGGGAGGGYGAGGGAGSSLGGSGYGSGGGGGSGYGGVGNHGVGYGSGG 120

Query: 121 GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYG 180
           GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGG GKGYGSGGGGGSGYGGRGDHGVGYG
Sbjct: 121 GGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGVGYG 180

Query: 181 SGGGGGYGSGVGGGAGVVDHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGAHG 240
           SGGGGGYGSGVGG    VDHGVGYGSGGGGGAG GYGGSKGYG GSGGGGGAGYGGGAHG
Sbjct: 181 SGGGGGYGSGVGGAG--VDHGVGYGSGGGGGAGGGYGGSKGYGAGSGGGGGAGYGGGAHG 240

Query: 241 SGYGSGG--GAGSGEEGGYDGGYAP 262
           SGYGSGG  GAGSGEEGGYDGGYAP
Sbjct: 241 SGYGSGGGAGAGSGEEGGYDGGYAP 263

[Close]

BLAST of CSPI03G01550 vs. NCBI nr
Match: gi|659095614|ref|XP_008448674.1| (PREDICTED: glycine-rich cell wall structural protein 1.8-like [Cucumis melo])

HSP 1 Score: 184.1 bits (466), Expect = 3.1e-43
Identity = 177/291 (60.82%), Postives = 191/291 (65.64%), Query Frame = 1


Query: 1   MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRSGYDNYDHPVVNPK----------- 60
           MAIS+TLSFGFLLLVSLGLASA RSLL+YD PPH+SGYD+++  V   +           
Sbjct: 10  MAISRTLSFGFLLLVSLGLASATRSLLTYD-PPHQSGYDDHNTKVGYGRDRHDEPYGGGA 69

Query: 61  --------------VGYEHDRRDGYYHDRDHHDAPYGGGAGGGYGAGAGAGSSLGGSGYG 120
                         VG++HD  DGY  DRDHHD  YGGGAGGGYGAGAG  SSLGGSGYG
Sbjct: 70  GGGYGAGAGSGYGSVGHDHDHHDGY--DRDHHDRSYGGGAGGGYGAGAG--SSLGGSGYG 129

Query: 121 SGGGGGSGYGGVGNHEVGYGSGGGGGYGAGVGSDLGGSGYGSGGGGGSGGGYGDLGGRGK 180
           +          VG+H VGYGSGG GGYGAGVGSDLGGSGYGSG GGGSGGGYGD+G RGK
Sbjct: 130 N----------VGDHGVGYGSGGSGGYGAGVGSDLGGSGYGSGNGGGSGGGYGDVGSRGK 189

Query: 181 GYGSGGGGGSGYGGRGDHGVGYGSGGGGGYGSGVGGGAGVVDHGVGYGSGGGGGAGSGYG 240
           GYG GG GGSGYGGRGD            YG GVG    V                  YG
Sbjct: 190 GYGRGGVGGSGYGGRGD------------YGRGVGHDDVV------------------YG 249

Query: 241 GSKGYGGGSGGGGGAGYGGGAHGSGYGSGGGA-----GSGEEGGYDGGYAP 262
           GSKGYGGGSG GGGAGY GGAHGSG G+G G+     GSGEEGGYDGGYAP
Sbjct: 250 GSKGYGGGSGVGGGAGYSGGAHGSGGGAGSGSGSGYGGSGEEGGYDGGYAP 255

[Close]

BLAST of CSPI03G01550 vs. NCBI nr
Match: gi|778688288|ref|XP_011652710.1| (PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis sativus])

HSP 1 Score: 144.4 bits (363), Expect = 2.7e-31
Identity = 166/303 (54.79%), Postives = 172/303 (56.77%), Query Frame = 1


Query: 1   MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHR------------------------- 60
           MAI +T SFGFLLLVSLGLASA RSLL+YD P H                          
Sbjct: 10  MAIFRTFSFGFLLLVSLGLASATRSLLTYDPPHHSVYDDHNTKVGYGRDHHDQPYGGGVG 69

Query: 61  ----------SGYDNYDHPVVNPKVGYEHDRRDGYYHDRDHHDAPYGGGAGGGYGAGAGA 120
                     SGY           VGYEHD  DGY  D   HD  YGG AGGGYG GAG 
Sbjct: 70  ASGGYGAGAGSGYGG---------VGYEHDHHDGYERD---HDRSYGGSAGGGYGVGAG- 129

Query: 121 GSSLGGSGYGSGGGGGSGYGGVGNHEVGYGSGGGGGYGAGVGSDLGGSGYGSGGGGGSGG 180
            SSLGGSGYG+            +H VGY +GG GGYGAGVGSDLGGSGYGSG GG SG 
Sbjct: 130 -SSLGGSGYGNV-----------DHGVGYSNGGSGGYGAGVGSDLGGSGYGSGNGGASGS 189

Query: 181 GYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSGGGGGYGSGVGGGAGVVDHGVGYGSG 240
           G GDLGGRGKGYG GG GG+GYGGRGDHG              V G   VV         
Sbjct: 190 GNGDLGGRGKGYGRGGVGGNGYGGRGDHG-------------RVVGHDDVV--------- 249

Query: 241 GGGGAGSGYGGSKGYGGGSGGGGGAGYGGGAHGSGYGSGGGA-------GSGEEGGYDGG 262
                   YGGSKGYGGGSG GGGAGY GGA GSGYGSGGGA       GSGEEGGYDGG
Sbjct: 250 --------YGGSKGYGGGSGVGGGAGYSGGASGSGYGSGGGAGSGSGYGGSGEEGGYDGG 257

The following BLAST results are available for this feature:

BLAST of CSPI03G01550 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI03G01550 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L1U7_CUCSA	6.9e-106	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G009540 PE=4 SV=1	[more]
Q9ZWM2_CUCSA	1.5e-105	99.62	Glycine-rich protein-2 (Fragment) OS=Cucumis sativus PE=2 SV=1	[more]
A0A0A0L3Y0_CUCSA	1.9e-31	54.79	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G009550 PE=4 SV=1	[more]
Q9ZWM3_CUCSA	1.7e-16	51.14	Glycine-rich protein-1 OS=Cucumis sativus PE=2 SV=1	[more]
W1NU74_AMBTC	1.7e-11	52.98	Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00002p00219320 PE=4 SV=...	[more]

BLAST of CSPI03G01550 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CSPI03G01550 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778675041\|ref\|XP_011650342.1\|	9.8e-106	100.00	PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis sativus]	[more]
gi\|3810890\|dbj\|BAA34064.1\|	2.2e-105	99.62	glycine-rich protein-2 [Cucumis sativus]	[more]
gi\|659095612\|ref\|XP_008448673.1\|	9.5e-93	93.58	PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis melo]	[more]
gi\|659095614\|ref\|XP_008448674.1\|	3.1e-43	60.82	PREDICTED: glycine-rich cell wall structural protein 1.8-like [Cucumis melo]	[more]
gi\|778688288\|ref\|XP_011652710.1\|	2.7e-31	54.79	PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G01550.1	CSPI03G01550.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01228	EGGSHELL	coord: 117..127 score: 1.0E-7coord: 90..105 score: 1.0E-7coord: 6..22 score: 1.0E-7coord: 144..162 score: 1.

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI03G01550	CsaV3_3G001620	Cucumber (Chinese Long) v3	cpicucB144

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI03G01550	Cucurbita pepo (Zucchini)	cpecpiB215
CSPI03G01550	Cucurbita pepo (Zucchini)	cpecpiB245
CSPI03G01550	Cucurbita pepo (Zucchini)	cpecpiB720
CSPI03G01550	Cucurbita pepo (Zucchini)	cpecpiB865
CSPI03G01550	Bottle gourd (USVL1VR-Ls)	cpilsiB147
CSPI03G01550	Bottle gourd (USVL1VR-Ls)	cpilsiB227
CSPI03G01550	Melon (DHL92) v3.6.1	cpimedB213
CSPI03G01550	Melon (DHL92) v3.6.1	cpimedB225
CSPI03G01550	Cucumber (Gy14) v2	cgybcpiB110
CSPI03G01550	Cucumber (Gy14) v2	cgybcpiB113
CSPI03G01550	Silver-seed gourd	carcpiB0534
CSPI03G01550	Silver-seed gourd	carcpiB0818
CSPI03G01550	Silver-seed gourd	carcpiB1001
CSPI03G01550	Silver-seed gourd	carcpiB1007
CSPI03G01550	Cucumber (Chinese Long) v3	cpicucB146
CSPI03G01550	Watermelon (97103) v2	cpiwmbB184
CSPI03G01550	Watermelon (97103) v2	cpiwmbB261
CSPI03G01550	Wax gourd	cpiwgoB229
CSPI03G01550	Wax gourd	cpiwgoB308
CSPI03G01550	Wild cucumber (PI 183967)	cpicpiB100
CSPI03G01550	Cucumber (Gy14) v1	cgycpiB474
CSPI03G01550	Cucumber (Gy14) v1	cgycpiB484
CSPI03G01550	Cucurbita maxima (Rimu)	cmacpiB332
CSPI03G01550	Cucurbita maxima (Rimu)	cmacpiB519
CSPI03G01550	Cucurbita maxima (Rimu)	cmacpiB608
CSPI03G01550	Cucurbita maxima (Rimu)	cmacpiB829
CSPI03G01550	Cucurbita moschata (Rifu)	cmocpiB323
CSPI03G01550	Cucurbita moschata (Rifu)	cmocpiB509
CSPI03G01550	Cucurbita moschata (Rifu)	cmocpiB597
CSPI03G01550	Cucurbita moschata (Rifu)	cmocpiB817
CSPI03G01550	Cucumber (Chinese Long) v2	cpicuB120
CSPI03G01550	Cucumber (Chinese Long) v2	cpicuB122
CSPI03G01550	Melon (DHL92) v3.5.1	cpimeB218
CSPI03G01550	Melon (DHL92) v3.5.1	cpimeB240
CSPI03G01550	Watermelon (Charleston Gray)	cpiwcgB180
CSPI03G01550	Watermelon (Charleston Gray)	cpiwcgB190
CSPI03G01550	Watermelon (97103) v1	cpiwmB184
CSPI03G01550	Watermelon (97103) v1	cpiwmB200