CSPI03G01300 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G01300
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr3 : 910062 .. 910332 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGGGAAGGAGAGGACCCGGGCGGCGGGGAGTGAGGGTGACGGCACGTGGAAGTCACGCAGCCGTGAGAAGTCAGTAGTAGTACGTCTACGTGTACATATTCATTTTGTTTTTTGACTTAAAACGCATTGGGCGTGGTGGGGTCCAAGCGGTCAAATCAACGGTAGTGATTCTCTTTGGGTTTTGTTCATCTGACGGCTACAACGAGGCCCTACATGCCTGCTCTTCACAGAAGCCGCTAACGTGTCTTCTTATTATCTCAACTTAG

mRNA sequence

ATGGAAGGGAAGGAGAGGACCCGGGCGGCGGGGAGTGAGGGTGACGGCACGTGGAAGTCACGCAGCCCGGTCAAATCAACGGTAGTGATTCTCTTTGGGTTTTGTTCATCTGACGGCTACAACGAGGCCCTACATGCCTGCTCTTCACAGAAGCCGCTAACGTGTCTTCTTATTATCTCAACTTAG

Coding sequence (CDS)

ATGGAAGGGAAGGAGAGGACCCGGGCGGCGGGGAGTGAGGGTGACGGCACGTGGAAGTCACGCAGCCCGGTCAAATCAACGGTAGTGATTCTCTTTGGGTTTTGTTCATCTGACGGCTACAACGAGGCCCTACATGCCTGCTCTTCACAGAAGCCGCTAACGTGTCTTCTTATTATCTCAACTTAG
Homology
[Close]
BLAST of CSPI03G01300 vs. TrEMBL
Match: A0A0A0L3V1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G007280 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.7e-26
Identity = 60/61 (98.36%), Postives = 60/61 (98.36%), Query Frame = 1 

Query: 1  MEGKERTRAAGSEGDGTWKSRSPVKSTVVILFGFCSSDGYNEALHACSSQKPLTCLLIIS 60
          MEGKERTRAAGSEGDGTWKSRSPVKSTVVILFGFCSSDGYNEALHACSSQ PLTCLLIIS
Sbjct: 1  MEGKERTRAAGSEGDGTWKSRSPVKSTVVILFGFCSSDGYNEALHACSSQNPLTCLLIIS 60

Query: 61 T 62
          T
Sbjct: 61 T 61

[Close]
BLAST of CSPI03G01300 vs. NCBI nr
Match: gi|700200586|gb|KGN55719.1| (hypothetical protein Csa_3G007280 [Cucumis sativus])

HSP 1 Score: 125.9 bits (315), Expect = 2.4e-26
Identity = 60/61 (98.36%), Postives = 60/61 (98.36%), Query Frame = 1 

Query: 1  MEGKERTRAAGSEGDGTWKSRSPVKSTVVILFGFCSSDGYNEALHACSSQKPLTCLLIIS 60
          MEGKERTRAAGSEGDGTWKSRSPVKSTVVILFGFCSSDGYNEALHACSSQ PLTCLLIIS
Sbjct: 1  MEGKERTRAAGSEGDGTWKSRSPVKSTVVILFGFCSSDGYNEALHACSSQNPLTCLLIIS 60

Query: 61 T 62
          T
Sbjct: 61 T 61

The following BLAST results are available for this feature:
BLAST of CSPI03G01300 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI03G01300 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L3V1_CUCSA1.7e-2698.36Uncharacterized protein OS=Cucumis sativus GN=Csa_3G007280 PE=4 SV=1[more]
BLAST of CSPI03G01300 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI03G01300 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700200586|gb|KGN55719.1|2.4e-2698.36hypothetical protein Csa_3G007280 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G01300.1CSPI03G01300.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI03G01300Csa3G007280Cucumber (Chinese Long) v2cpicuB120
CSPI03G01300CsaV3_3G001330Cucumber (Chinese Long) v3cpicucB144
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI03G01300Cucumber (Chinese Long) v3cpicucB146
CSPI03G01300Watermelon (97103) v2cpiwmbB184
CSPI03G01300Watermelon (97103) v2cpiwmbB261
CSPI03G01300Wax gourdcpiwgoB308
CSPI03G01300Wax gourdcpiwgoB339
CSPI03G01300Wild cucumber (PI 183967)cpicpiB100
CSPI03G01300Cucumber (Gy14) v1cgycpiB474
CSPI03G01300Cucumber (Gy14) v1cgycpiB484
CSPI03G01300Cucurbita maxima (Rimu)cmacpiB332
CSPI03G01300Cucurbita maxima (Rimu)cmacpiB519
CSPI03G01300Cucurbita maxima (Rimu)cmacpiB608
CSPI03G01300Cucurbita maxima (Rimu)cmacpiB829
CSPI03G01300Cucurbita moschata (Rifu)cmocpiB323
CSPI03G01300Cucurbita moschata (Rifu)cmocpiB509
CSPI03G01300Cucurbita moschata (Rifu)cmocpiB597
CSPI03G01300Cucurbita moschata (Rifu)cmocpiB817
CSPI03G01300Cucumber (Chinese Long) v2cpicuB122
CSPI03G01300Melon (DHL92) v3.5.1cpimeB218
CSPI03G01300Melon (DHL92) v3.5.1cpimeB240
CSPI03G01300Watermelon (Charleston Gray)cpiwcgB180
CSPI03G01300Watermelon (Charleston Gray)cpiwcgB190
CSPI03G01300Watermelon (97103) v1cpiwmB184
CSPI03G01300Watermelon (97103) v1cpiwmB200
CSPI03G01300Cucurbita pepo (Zucchini)cpecpiB215
CSPI03G01300Cucurbita pepo (Zucchini)cpecpiB245
CSPI03G01300Cucurbita pepo (Zucchini)cpecpiB720
CSPI03G01300Cucurbita pepo (Zucchini)cpecpiB865
CSPI03G01300Bottle gourd (USVL1VR-Ls)cpilsiB147
CSPI03G01300Bottle gourd (USVL1VR-Ls)cpilsiB227
CSPI03G01300Melon (DHL92) v3.6.1cpimedB213
CSPI03G01300Melon (DHL92) v3.6.1cpimedB225
CSPI03G01300Cucumber (Gy14) v2cgybcpiB110
CSPI03G01300Cucumber (Gy14) v2cgybcpiB113
CSPI03G01300Silver-seed gourdcarcpiB0818
CSPI03G01300Silver-seed gourdcarcpiB1001
CSPI03G01300Silver-seed gourdcarcpiB1085