CSPI02G25130 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI02G25130
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr2 : 21472464 .. 21472987 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCACATCTTGTAAAGCACACATGTCCCAAACCTCACACTGTGGCATGTGATGCAACTTGCCGTGACAACACGGAGTTGGTAGATTTAGCTCTGCGCATTGAAAATAGTGTGGGAGGAAAGAGACCAATTTCAGAATTTAGTGAAAAAGAAGAGAAGAAAAGTGTTGGAGGTTCTAGTAAAAAGTCCAAGTCCGCATTCAGTCAAGGATTGCGTTGGAGTAGCAATCCAAAGTGGAGGTGCACTGAATGTGGTAAAAGACATTTAGAGGTTTGTAGGCGAAATAATATTGTTTGTTACAAGTGTAGGGAGAACATGGGCATTACAAAAGTGAATGGCAAGTTAAAACTAAAGTAGGCGAGGAACCAGCGCAAATAGGGGTGGTGTCACACTTAGTACAACAACCTTCGCGAGGAGGCTCTACAGTAGACAAAAAAAAAAAAATTGTGGATATAGAATTTCGGGGACGAAATGACGAAATTCTTAAAGGATGGGAGAGTTGTGAGCGACTCATGTATGAATAG

mRNA sequence

ATGTCACATCTTGTAAAGCACACATGTCCCAAACCTCACACTGTGGCATGTGATGCAACTTGCCGTGACAACACGGAGTTGGTAGATTTAGCTCTGCGCATTGAAAATAGTGTGGGAGGAAAGAGACCAATTTCAGAATTTAGTGAAAAAGAAGAGAAGAAAAGTGTTGGAGGTTCTAGTAAAAAGTCCAAGTCCGCATTCAGTCAAGGATTGCGTTGGAGTAGCAATCCAAAGTGGAGGTGCACTGAATGTGGTAAAAGACATTTAGAGGGAGAACATGGGCATTACAAAAGTGAATGGCAAGTTAAAACTAAAGTAGGCGAGGAACCAGCGCAAATAGGGGTGGTGTCACACTTAGTACAACAACCTTCGCGAGGAGGCTCTACAGTAGACAAAAAAAAAAAAATTGTGGATATAGAATTTCGGGGACGAAATGACGAAATTCTTAAAGGATGGGAGAGTTGTGAGCGACTCATGTATGAATAG

Coding sequence (CDS)

ATGTCACATCTTGTAAAGCACACATGTCCCAAACCTCACACTGTGGCATGTGATGCAACTTGCCGTGACAACACGGAGTTGGTAGATTTAGCTCTGCGCATTGAAAATAGTGTGGGAGGAAAGAGACCAATTTCAGAATTTAGTGAAAAAGAAGAGAAGAAAAGTGTTGGAGGTTCTAGTAAAAAGTCCAAGTCCGCATTCAGTCAAGGATTGCGTTGGAGTAGCAATCCAAAGTGGAGGTGCACTGAATGTGGTAAAAGACATTTAGAGGGAGAACATGGGCATTACAAAAGTGAATGGCAAGTTAAAACTAAAGTAGGCGAGGAACCAGCGCAAATAGGGGTGGTGTCACACTTAGTACAACAACCTTCGCGAGGAGGCTCTACAGTAGACAAAAAAAAAAAAATTGTGGATATAGAATTTCGGGGACGAAATGACGAAATTCTTAAAGGATGGGAGAGTTGTGAGCGACTCATGTATGAATAG
Homology
[Close]
BLAST of CSPI02G25130 vs. TrEMBL
Match: A0A0A0LQ25_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G404230 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.3e-22
Identity = 55/56 (98.21%), Postives = 55/56 (98.21%), Query Frame = 1 

Query: 1  MSHLVKHTCPKPHTVACDATCRDNTELVDLALRIENSVGGKRPISEFSEKEEKKSV 57
          MSHLVKHTCPKPHTVACDATCRDNTELVDLALRIE SVGGKRPISEFSEKEEKKSV
Sbjct: 1  MSHLVKHTCPKPHTVACDATCRDNTELVDLALRIEKSVGGKRPISEFSEKEEKKSV 56

[Close]
BLAST of CSPI02G25130 vs. NCBI nr
Match: gi|700208000|gb|KGN63119.1| (hypothetical protein Csa_2G404230 [Cucumis sativus])

HSP 1 Score: 114.4 bits (285), Expect = 1.9e-22
Identity = 55/56 (98.21%), Postives = 55/56 (98.21%), Query Frame = 1 

Query: 1  MSHLVKHTCPKPHTVACDATCRDNTELVDLALRIENSVGGKRPISEFSEKEEKKSV 57
          MSHLVKHTCPKPHTVACDATCRDNTELVDLALRIE SVGGKRPISEFSEKEEKKSV
Sbjct: 1  MSHLVKHTCPKPHTVACDATCRDNTELVDLALRIEKSVGGKRPISEFSEKEEKKSV 56

The following BLAST results are available for this feature:
BLAST of CSPI02G25130 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI02G25130 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LQ25_CUCSA1.3e-2298.21Uncharacterized protein OS=Cucumis sativus GN=Csa_2G404230 PE=4 SV=1[more]
BLAST of CSPI02G25130 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI02G25130 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700208000|gb|KGN63119.1|1.9e-2298.21hypothetical protein Csa_2G404230 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G25130.1CSPI02G25130.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI02G25130Csa2G404230Cucumber (Chinese Long) v2cpicuB065
CSPI02G25130CsaV3_2G033640Cucumber (Chinese Long) v3cpicucB081
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI02G25130Watermelon (97103) v2cpiwmbB106
CSPI02G25130Wax gourdcpiwgoB161
CSPI02G25130Cucumber (Gy14) v1cgycpiB093
CSPI02G25130Cucurbita maxima (Rimu)cmacpiB281
CSPI02G25130Cucurbita maxima (Rimu)cmacpiB702
CSPI02G25130Cucurbita moschata (Rifu)cmocpiB271
CSPI02G25130Cucurbita moschata (Rifu)cmocpiB695
CSPI02G25130Melon (DHL92) v3.5.1cpimeB116
CSPI02G25130Watermelon (Charleston Gray)cpiwcgB112
CSPI02G25130Watermelon (97103) v1cpiwmB167
CSPI02G25130Cucurbita pepo (Zucchini)cpecpiB168
CSPI02G25130Cucurbita pepo (Zucchini)cpecpiB385
CSPI02G25130Bottle gourd (USVL1VR-Ls)cpilsiB113
CSPI02G25130Melon (DHL92) v3.6.1cpimedB112
CSPI02G25130Cucumber (Gy14) v2cgybcpiB057
CSPI02G25130Silver-seed gourdcarcpiB0018
CSPI02G25130Silver-seed gourdcarcpiB1119