CSPI02G24870 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI02G24870
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionMitochondrial transcription termination factor family protein
LocationChr2 : 21317898 .. 21319591 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGTAGCAGTGGGCAGTGCATACCAGGCCATCACCCTCGCAAACCTCTTCTTTCACTTTCCAATGGCCAATTTTCTCCGCAAACCTTCTCTACTACGTCTCTATGCTCAAGACCTCCGGAATTTCGCACACAACAAAACCACTATTGGCCTCAATTTCCTTTCTTCTCTCTCTCAATCCCCTCAATCAACCAACCATCGGACACTCGATTACCTAATCCACACCATCGGCCTCTCCAAGGATTCAGCTCTCGCCGCTGCCAAGAAAATCCATCTCAAACCATCCTCGGATCCCGACTCTGTTCTTGCTCTCTTTAACGCCTATGGATTCACGCCCTCCCAGACCGCCAACATCTTTTGCAGACAACCCAGACTCCTTCTTGCTGATCCGGACAAAACACTCAAGCCCAAGTTCGAGTTTCTCTCCAAAAACGGCATATCTGGTAACTTTCTCGTCGACTTAATCTGTAGGGAGCCACATATTCTTCGAAGGAGCCTGGACAAGAAGATTGTTCCATGTATTGATTTTCTAATAAATTTCTTTGGGTCTACTGATTGTATTGTTTCGTTATTTTGTACTACACAGAGGACTCGTGTTTTGCACACGTTTTCTGAATTTATGGCTCCTAATATCGAAGTATTGAGAGCTAATGGGGTGCTCGATTCGAGCATTGCTAAACTGTTTTGGAAGCGCCCAGTTGCACTGTCCAGGGATGTGAAATGGTTTACTGACATTGTCGAGAAGACGAAGGAAAGGGGGTTCAATCCTTCGAGTTTGATGTTTATTAATGGGCTGTGTATAGTTTCATCGATGAGCAAGGACAGATGGTTATCGAAACTGCATATTTTTAGAAGTTATGGGTGGTTAGATGAGCAGTTTCAATCTATGTTTCTCAAGCAACCTTGTTTCATGAATAGGTCCGAGGAGGGTTTAAAAAGGGTATTGGATTTCTTTATGAACAAATGGGACTGGACACGGGAAGAAATTTACAGATACCCAATTGTGCTCATTCTTAGTTTTGAAAAGAGGGTGATGCCTAGGTCGTCTATCCTTCAGCACCTCATATCAAAAGGTTTAATCAAGAGGAAGAGTCTTGGCTTGGCATTGAAAATTTCCGAGCACGAGTTCTTGGAGAAGTTTGTTATGCAGTATCTTTCAGAAGATCCCCATCTATTAGAGATGTACCAGGAGAAGAAGAAGATTGCGATATAACGAAAACTTTCTGCTTCACTTCAAGCAATTTGTCTATTCTGCTACTAACTCTGCACTTCATATTATGAGGTAAACTCGTAGGTTTGTGTGCAATGGTTGTGAAATTTCTCACATCTTAGAACTTTGTATTTTGATCTCTTAGGAATGTACCAACTTGCATGAGACTGCGCCAAGAGAAGTAACTAATTCTGATGCTTAATTTTAAAGATTGATTGGTATTCTCATTGATGATTGTGGAGTTCATCTTCCATTTACCATTTAGAGAGAACGGTTGTTGCCTTTTGTTCGCGGGGTGTGTGCTCTTAGTGTTGTTTTGAAGTAGTTTGTATCTCTTCGTTTCTTTGCTTTCTTTTTCTTTCTGTTTTTCTCTCTTCCAATACCTTTTTGAAGATTGTATGTATTCTTGACCTTTTTTCTGCATAATGATTTAAATGAGATTTTTTACATGAAGTAAAACTTCTTTGGCATTTTTTTTTTTCAAT

mRNA sequence

ATGGCCAATTTTCTCCGCAAACCTTCTCTACTACGTCTCTATGCTCAAGACCTCCGGAATTTCGCACACAACAAAACCACTATTGGCCTCAATTTCCTTTCTTCTCTCTCTCAATCCCCTCAATCAACCAACCATCGGACACTCGATTACCTAATCCACACCATCGGCCTCTCCAAGGATTCAGCTCTCGCCGCTGCCAAGAAAATCCATCTCAAACCATCCTCGGATCCCGACTCTGTTCTTGCTCTCTTTAACGCCTATGGATTCACGCCCTCCCAGACCGCCAACATCTTTTGCAGACAACCCAGACTCCTTCTTGCTGATCCGGACAAAACACTCAAGCCCAAGTTCGAGTTTCTCTCCAAAAACGGCATATCTGGTAACTTTCTCGTCGACTTAATCTGTAGGGAGCCACATATTCTTCGAAGGAGCCTGGACAAGAAGATTGTTCCATGTATTGATTTTCTAATAAATTTCTTTGGGTCTACTGATTGTATTGTTTCGTTATTTTGTACTACACAGAGGACTCGTGTTTTGCACACGTTTTCTGAATTTATGGCTCCTAATATCGAAGTATTGAGAGCTAATGGGGTGCTCGATTCGAGCATTGCTAAACTGTTTTGGAAGCGCCCAGTTGCACTGTCCAGGGATGTGAAATGGTTTACTGACATTGTCGAGAAGACGAAGGAAAGGGGGTTCAATCCTTCGAGTTTGATGTTTATTAATGGGCTGTGTATAGTTTCATCGATGAGCAAGGACAGATGGTTATCGAAACTGCATATTTTTAGAAGTTATGGGTGGTTAGATGAGCAGTTTCAATCTATGTTTCTCAAGCAACCTTGTTTCATGAATAGGTCCGAGGAGGGTTTAAAAAGGGTATTGGATTTCTTTATGAACAAATGGGACTGGACACGGGAAGAAATTTACAGATACCCAATTGTGCTCATTCTTAGTTTTGAAAAGAGGGTGATGCCTAGGTCGTCTATCCTTCAGCACCTCATATCAAAAGGTTTAATCAAGAGGAAGAGTCTTGGCTTGGCATTGAAAATTTCCGAGCACGAGTTCTTGGAGAAGTTTGTTATGCAGTATCTTTCAGAAGATCCCCATCTATTAGAGATGTACCAGGAGAAGAAGAAGATTGCGATATAA

Coding sequence (CDS)

ATGGCCAATTTTCTCCGCAAACCTTCTCTACTACGTCTCTATGCTCAAGACCTCCGGAATTTCGCACACAACAAAACCACTATTGGCCTCAATTTCCTTTCTTCTCTCTCTCAATCCCCTCAATCAACCAACCATCGGACACTCGATTACCTAATCCACACCATCGGCCTCTCCAAGGATTCAGCTCTCGCCGCTGCCAAGAAAATCCATCTCAAACCATCCTCGGATCCCGACTCTGTTCTTGCTCTCTTTAACGCCTATGGATTCACGCCCTCCCAGACCGCCAACATCTTTTGCAGACAACCCAGACTCCTTCTTGCTGATCCGGACAAAACACTCAAGCCCAAGTTCGAGTTTCTCTCCAAAAACGGCATATCTGGTAACTTTCTCGTCGACTTAATCTGTAGGGAGCCACATATTCTTCGAAGGAGCCTGGACAAGAAGATTGTTCCATGTATTGATTTTCTAATAAATTTCTTTGGGTCTACTGATTGTATTGTTTCGTTATTTTGTACTACACAGAGGACTCGTGTTTTGCACACGTTTTCTGAATTTATGGCTCCTAATATCGAAGTATTGAGAGCTAATGGGGTGCTCGATTCGAGCATTGCTAAACTGTTTTGGAAGCGCCCAGTTGCACTGTCCAGGGATGTGAAATGGTTTACTGACATTGTCGAGAAGACGAAGGAAAGGGGGTTCAATCCTTCGAGTTTGATGTTTATTAATGGGCTGTGTATAGTTTCATCGATGAGCAAGGACAGATGGTTATCGAAACTGCATATTTTTAGAAGTTATGGGTGGTTAGATGAGCAGTTTCAATCTATGTTTCTCAAGCAACCTTGTTTCATGAATAGGTCCGAGGAGGGTTTAAAAAGGGTATTGGATTTCTTTATGAACAAATGGGACTGGACACGGGAAGAAATTTACAGATACCCAATTGTGCTCATTCTTAGTTTTGAAAAGAGGGTGATGCCTAGGTCGTCTATCCTTCAGCACCTCATATCAAAAGGTTTAATCAAGAGGAAGAGTCTTGGCTTGGCATTGAAAATTTCCGAGCACGAGTTCTTGGAGAAGTTTGTTATGCAGTATCTTTCAGAAGATCCCCATCTATTAGAGATGTACCAGGAGAAGAAGAAGATTGCGATATAA
Homology
[Close]
BLAST of CSPI02G24870 vs. TrEMBL
Match: A0A0A0LQN0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G402010 PE=4 SV=1)

HSP 1 Score: 759.6 bits (1960), Expect = 1.8e-216
Identity = 376/382 (98.43%), Postives = 377/382 (98.69%), Query Frame = 1 

Query: 1   MANFLRKPSLLRLYAQDLRNFAHNKTTIGLNFLSSLSQSPQSTNHRTLDYLIHTIGLSKD 60
           MANFLRKPSLLRLYAQDLRNFAHNKTTIGLNFLSSLSQSPQSTNHRTLDYLIHTIGLSKD
Sbjct: 1   MANFLRKPSLLRLYAQDLRNFAHNKTTIGLNFLSSLSQSPQSTNHRTLDYLIHTIGLSKD 60

Query: 61  SALAAAKKIHLKPSSDPDSVLALFNAYGFTPSQTANIFCRQPRLLLADPDKTLKPKFEFL 120
           SALAAAKKIHLKPSSDPDSVLALFNAYGFTPSQTANIFCRQPRLLLADPDKTLKPKFEFL
Sbjct: 61  SALAAAKKIHLKPSSDPDSVLALFNAYGFTPSQTANIFCRQPRLLLADPDKTLKPKFEFL 120

Query: 121 SKNGISGNFLVDLICREPHILRRSLDKKIVPCIDFLINFFGSTDCIVSLFCTTQRTRVLH 180
           SKNGISGNFLVDLICREPHILRRSLDKKIVPC DFLINFFGSTDCIVSLFCTT RTRVLH
Sbjct: 121 SKNGISGNFLVDLICREPHILRRSLDKKIVPCFDFLINFFGSTDCIVSLFCTTHRTRVLH 180

Query: 181 TFSEFMAPNIEVLRANGVLDSSIAKLFWKRPVALSRDVKWFTDIVEKTKERGFNPSSLMF 240
           TFSEFMAPNIEVLRANGV DSSIAKLFWKRPVALSRDVKWFTDIVEKTKERGFNPSSLMF
Sbjct: 181 TFSEFMAPNIEVLRANGVPDSSIAKLFWKRPVALSRDVKWFTDIVEKTKERGFNPSSLMF 240

Query: 241 INGLCIVSSMSKDRWLSKLHIFRSYGWLDEQFQSMFLKQPCFMNRSEEGLKRVLDFFMNK 300
           INGLCIVSSMSKDRWLSKLHIFRSYGW DEQFQSMFLKQPCFMNRSEEGLKR LDFFMNK
Sbjct: 241 INGLCIVSSMSKDRWLSKLHIFRSYGWSDEQFQSMFLKQPCFMNRSEEGLKRALDFFMNK 300

Query: 301 WDWTREEIYRYPIVLILSFEKRVMPRSSILQHLISKGLIKRKSLGLALKISEHEFLEKFV 360
           WDWTREEIYRYPIVLILSFEKRVMPRSSILQHLISKGLIKRKSLG+ALKISEHEFLEKFV
Sbjct: 301 WDWTREEIYRYPIVLILSFEKRVMPRSSILQHLISKGLIKRKSLGMALKISEHEFLEKFV 360

Query: 361 MQYLSEDPHLLEMYQEKKKIAI 383
           MQYLSEDPHLLEMYQEKKKIAI
Sbjct: 361 MQYLSEDPHLLEMYQEKKKIAI 382

[Close]
BLAST of CSPI02G24870 vs. TrEMBL
Match: A0A0A0LK19_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G346010 PE=4 SV=1)

HSP 1 Score: 607.8 bits (1566), Expect = 8.9e-171
Identity = 301/382 (78.80%), Postives = 339/382 (88.74%), Query Frame = 1 

Query: 1   MANFLRKPSLLRLYAQDLRNFAHNKTTIGLNFLSSLSQSPQSTNHRTLDYLIHTIGLSKD 60
           M NFL KPSLLRL+AQDLR+F HN TTIGL FLSSLSQ+PQSTN  T+DYLIHTIGLSK 
Sbjct: 1   MTNFLLKPSLLRLFAQDLRDFTHNNTTIGLKFLSSLSQTPQSTNDPTVDYLIHTIGLSKA 60

Query: 61  SALAAAKKIHLKPSSDPDSVLALFNAYGFTPSQTANIFCRQPRLLLADPDKTLKPKFEFL 120
           SALAAAK+I LKP++ PDSVLALFNAYGFTPS  A+IF R+P LLLA+PD TLKPKFEFL
Sbjct: 61  SALAAAKQIRLKPTAHPDSVLALFNAYGFTPSHIASIFSRRPSLLLANPDTTLKPKFEFL 120

Query: 121 SKNGISGNFLVDLICREPHILRRSLDKKIVPCIDFLINFFGSTDCIVSLFCTTQRTRVLH 180
           S+NGISGNFL D+I R+P IL RSLDK+IVPCIDFLINFFGSTDCIVSLF T  RTRVLH
Sbjct: 121 SRNGISGNFLADVIDRDPLILCRSLDKQIVPCIDFLINFFGSTDCIVSLFSTAHRTRVLH 180

Query: 181 TFSEFMAPNIEVLRANGVLDSSIAKLFWKRPVALSRDVKWFTDIVEKTKERGFNPSSLMF 240
           TFSEF+APNIEVLRANGVLDS+IAKL W RP+ALSRDV+WFTDIVEKT+ERGFNPSSLMF
Sbjct: 181 TFSEFVAPNIEVLRANGVLDSNIAKLLWMRPIALSRDVEWFTDIVEKTRERGFNPSSLMF 240

Query: 241 INGLCIVSSMSKDRWLSKLHIFRSYGWLDEQFQSMFLKQPCFMNRSEEGLKRVLDFFMNK 300
           I+GLC +SSMSKD+WLSKLH+FRS+GW DEQFQSMFLK+P  MN SEE LKR LDFF+ K
Sbjct: 241 IHGLCTLSSMSKDKWLSKLHLFRSFGWSDEQFQSMFLKKPFVMNSSEEHLKRALDFFVIK 300

Query: 301 WDWTREEIYRYPIVLILSFEKRVMPRSSILQHLISKGLIKRKSLGLALKISEHEFLEKFV 360
           WDWT E+I +Y ++L  S EKR++PRSSILQHLISKG IKRKS+G AL   EH+FLEKFV
Sbjct: 301 WDWTWEDISKYSLLLNFSLEKRLIPRSSILQHLISKGFIKRKSVGSALNSPEHKFLEKFV 360

Query: 361 MQYLSEDPHLLEMYQEKKKIAI 383
           M+YLSEDP+LLEMYQEKKK+A+
Sbjct: 361 MKYLSEDPNLLEMYQEKKKMAL 382

[Close]
BLAST of CSPI02G24870 vs. TrEMBL
Match: M5XIM3_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa018608mg PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.0e-81
Identity = 161/331 (48.64%), Postives = 219/331 (66.16%), Query Frame = 1 

Query: 49  DYLIHTIGLSKDSALAAAKKIHLKPSSDPDSVLALFNAYGFTPSQTANIFCRQPRLLLAD 108
           DYL +T+  + +SA   +KKIH +P ++P  V +LF  YGFTP+  A I    P  L A+
Sbjct: 31  DYLTNTLAFTPESASQVSKKIHGRPPNNPYPVHSLFEHYGFTPTHIAKIITICPSFLWAN 90

Query: 109 PDKTLKPKFEFLSKNGISGNFLVDLICREPHILRRSLDKKIVPCIDFLINFFGSTDCIVS 168
           P+KTLKPK +FL++NGI G  LV  I   P IL RSL+K+I PCI FL +F GS   ++S
Sbjct: 91  PEKTLKPKLDFLAQNGIYGQDLVITITNNPRILERSLNKQIAPCIGFLKSFLGSASALLS 150

Query: 169 LFCTTQRTRVLHTFSEFMAPNIEVLRANGVLDSSIAKLFWKRPVALSRDVKWFTDIVEKT 228
            F   + T V+  FS+ M  N E LR +GV  S+I K+   +P   SRDV+ F+ IV + 
Sbjct: 151 HFSVKRGTAVVLRFSDSMGANAETLRQHGVPHSNIMKMIACQPGIFSRDVEVFSKIVREV 210

Query: 229 KERGFNPSSLMFINGLCIVSSMSKDRWLSKLHIFRSYGWLDEQFQSMFLKQPCFMNRSEE 288
           +E GFNP S+MFI G+C + SM+KD+W+SK  + +S+GW + +FQ++FLKQP  M  SEE
Sbjct: 211 EELGFNPLSMMFIYGVCTLFSMTKDKWVSKFEVLKSFGWSEAEFQALFLKQPLVMRSSEE 270

Query: 289 GLKRVLDFFMNKWDWTREEIYRYPIVLILSFEKRVMPRSSILQHLISKGLI--KRKSLGL 348
            LKR LDFFMNK  W   +I +YP++L LSFEKRV+PR SILQ LI+KG+I   +K+   
Sbjct: 271 RLKRALDFFMNKMGWGTSDILKYPVLLCLSFEKRVLPRWSILQVLIAKGVITKSKKTTAK 330

Query: 349 ALKISEHEFLEKFVMQYLSEDPHLLEMYQEK 378
           A   +E +F+ +FV  Y    P LLEMYQ+K
Sbjct: 331 AFMQTEDKFVSEFVKGYEEHAPELLEMYQKK 361

[Close]
BLAST of CSPI02G24870 vs. TrEMBL
Match: A0A059AA44_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00314 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 8.3e-76
Identity = 143/333 (42.94%), Postives = 221/333 (66.37%), Query Frame = 1 

Query: 49  DYLIHTIGLSKDSALAAAKKIHLKPSSDPDSVLALFNAYGFTPSQTANIFCRQPRLLLAD 108
           D L    G   +SA A A  +  K +   DS +A+F  +GF+PS+ A +  R PR L ++
Sbjct: 62  DRLARAHGFPPESARAVAAAVDPKLAHKLDSFVAVFTGHGFSPSEVATVLLRYPRCLRSN 121

Query: 109 PDKTLKPKFEFLSKNGISGNFLVDLICREPHILRRSLDKKIVPCIDFLINFFGSTDCIVS 168
           P K LKPK +FL+ NG++G  LV ++  +P++LRRSL+ ++ PC D L+ FFG+    +S
Sbjct: 122 PVKNLKPKLDFLAGNGVAGETLVHVLTNDPYLLRRSLESQLAPCFDCLVKFFGNRRDAIS 181

Query: 169 LFCTTQRTRVLHTFSEFMAPNIEVLRANGVLDSSIAKLFWKRPVALSRDVKWFTDIVEKT 228
           L    + T VLH F++ M  NI+ LR  GV DSSI KL   RP  LSRD   F++IV++ 
Sbjct: 182 LLMVKRGTWVLHKFTDSMELNIDKLRQVGVPDSSITKLMTVRPRTLSRDATEFSEIVDEV 241

Query: 229 KERGFNPSSLMFINGLCIVSSMSKDRWLSKLHIFRSYGWLDEQFQSMFLKQPCFMNRSEE 288
           +  G +PSSLMF+ G+  ++ M + +W +K+ +F+ +GW DEQF+++F+KQP  MN SE+
Sbjct: 242 RRMGLHPSSLMFVYGVITLAGMKRPKWEAKIAVFKKFGWSDEQFKAIFVKQPQIMNPSEK 301

Query: 289 GLKRVLDFFMNKWDWTREEIYRYPIVLILSFEKRVMPRSSILQHLISKGLIKRKSLGLAL 348
            +++ L FFM++  WT +E+   P + + SF+KR++PR SIL  L+S+GL+KR+SL   L
Sbjct: 302 RMEQFLKFFMSELGWTADELTNCPSIFMASFKKRILPRMSILLFLLSEGLVKRQSLLGKL 361

Query: 349 KISEHEFLEKFVMQYLSEDPHLLEMYQEKKKIA 382
            +SE +FL KFVM+ + + P LL+MY++K+ +A
Sbjct: 362 LMSEDKFLSKFVMENVGKAPQLLQMYEDKQVLA 394

[Close]
BLAST of CSPI02G24870 vs. TrEMBL
Match: A0A059A9T0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00314 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 8.3e-76
Identity = 143/333 (42.94%), Postives = 221/333 (66.37%), Query Frame = 1 

Query: 49  DYLIHTIGLSKDSALAAAKKIHLKPSSDPDSVLALFNAYGFTPSQTANIFCRQPRLLLAD 108
           D L    G   +SA A A  +  K +   DS +A+F  +GF+PS+ A +  R PR L ++
Sbjct: 62  DRLARAHGFPPESARAVAAAVDPKLAHKLDSFVAVFTGHGFSPSEVATVLLRYPRCLRSN 121

Query: 109 PDKTLKPKFEFLSKNGISGNFLVDLICREPHILRRSLDKKIVPCIDFLINFFGSTDCIVS 168
           P K LKPK +FL+ NG++G  LV ++  +P++LRRSL+ ++ PC D L+ FFG+    +S
Sbjct: 122 PVKNLKPKLDFLAGNGVAGETLVHVLTNDPYLLRRSLESQLAPCFDCLVKFFGNRRDAIS 181

Query: 169 LFCTTQRTRVLHTFSEFMAPNIEVLRANGVLDSSIAKLFWKRPVALSRDVKWFTDIVEKT 228
           L    + T VLH F++ M  NI+ LR  GV DSSI KL   RP  LSRD   F++IV++ 
Sbjct: 182 LLMVKRGTWVLHKFTDSMELNIDKLRQVGVPDSSITKLMTVRPRTLSRDATEFSEIVDEV 241

Query: 229 KERGFNPSSLMFINGLCIVSSMSKDRWLSKLHIFRSYGWLDEQFQSMFLKQPCFMNRSEE 288
           +  G +PSSLMF+ G+  ++ M + +W +K+ +F+ +GW DEQF+++F+KQP  MN SE+
Sbjct: 242 RRMGLHPSSLMFVYGVITLAGMKRPKWEAKIAVFKKFGWSDEQFKAIFVKQPQIMNPSEK 301

Query: 289 GLKRVLDFFMNKWDWTREEIYRYPIVLILSFEKRVMPRSSILQHLISKGLIKRKSLGLAL 348
            +++ L FFM++  WT +E+   P + + SF+KR++PR SIL  L+S+GL+KR+SL   L
Sbjct: 302 RMEQFLKFFMSELGWTADELTNCPSIFMASFKKRILPRMSILLFLLSEGLVKRQSLLGKL 361

Query: 349 KISEHEFLEKFVMQYLSEDPHLLEMYQEKKKIA 382
            +SE +FL KFVM+ + + P LL+MY++K+ +A
Sbjct: 362 LMSEDKFLSKFVMENVGKAPQLLQMYEDKQVLA 394

[Close]
BLAST of CSPI02G24870 vs. TAIR10
Match: AT5G07900.1 (AT5G07900.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 182.2 bits (461), Expect = 6.1e-46
Identity = 109/330 (33.03%), Postives = 175/330 (53.03%), Query Frame = 1 

Query: 47  TLDYLIHTIGLSKDSALAAAKKIHLKPSSDPDSVLALFNAYGFTPSQTANIFCRQPRLLL 106
           TL+YLI + GLS DSA  A++K+ L     P++VL L   +GFT +Q +++  ++P LLL
Sbjct: 71  TLNYLIDSCGLSPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVLLL 130

Query: 107 ADPDKTLKPKFEFLSKNGISGNFLVDLICREPHILRRSLDKKIVPCIDFLINFFGSTDCI 166
           A+ +  L PK  F    G+S + L   +  +P IL RSL  +++P  +FL +   S + I
Sbjct: 131 ANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDEKI 190

Query: 167 VSLFCTTQRTRVLHTFSEFMAPNIEVLRANGVLDSSIAKLFWKRPVALSRDVKWFTDIVE 226
           V+    T     L   ++ + PNI  +   GV +  I  L    P A+ +    F  I +
Sbjct: 191 VAALRRTTWV-FLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIAK 250

Query: 227 KTKERGFNPSSLMFINGLCIVSSM-SKDRWLSKLHIFRSYGWLDEQFQSMFLKQPCFMNR 286
           + +E GFNP    F+  +  +S   +K  W     +++ +GW ++     F K P  M  
Sbjct: 251 QAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMML 310

Query: 287 SEEGLKRVLDFFMNKWDWTREEIYRYPIVLILSFEKRVMPRSSILQHLISKGLIKRK-SL 346
           SE  + R +++F+N+ +     I + P+VL  S EKR++PR S+ + L+S GL+K   SL
Sbjct: 311 SERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWSL 370

Query: 347 GLALKISEHEFLEKFVMQYLSEDPHLLEMY 375
              L   E  FLEK V++Y  E P L+ +Y
Sbjct: 371 TSLLVPVEKVFLEKLVIKYEEELPELMNLY 399

[Close]
BLAST of CSPI02G24870 vs. TAIR10
Match: AT1G21150.1 (AT1G21150.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 174.5 bits (441), Expect = 1.3e-43
Identity = 98/335 (29.25%), Postives = 169/335 (50.45%), Query Frame = 1 

Query: 47  TLDYLIHTIGLSKDSALAAAKKIHLKPSSDPDSVLALFNAYGFTPSQTANIFCRQPRLLL 106
           T+ YL+ + GLS +SA + ++ + L  S  PDSVLALF  +GFT  Q  ++    PR+L 
Sbjct: 58  TVSYLVDSCGLSLESAKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPRVLS 117

Query: 107 ADPDKTLKPKFEFLSKNGISGNFLVDLICREPHILRRSLDKKIVPCIDFLINFFGSTDCI 166
             P+  + PK  F S  G S +    +I   P +L  SL K+++PC D L +     + +
Sbjct: 118 LSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEEESV 177

Query: 167 VSLFCTTQRTRVLHT-FSEFMAPNIEVLRANGVLDSSIAKLFWKRPVALSRDVKWFTDIV 226
           V   C  +  R      +  ++  + + R  GV D SI  L    P       + F +++
Sbjct: 178 VK--CLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVL 237

Query: 227 EKTKERGFNPSSLMFINGLCIVSSMSKDRWLSKLHIFRSYGWLDEQFQSMFLKQPCFMNR 286
            +    GF+P    F++ +      S+     K  +F+ +GW  E F +  ++ P  +  
Sbjct: 238 NRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTV 297

Query: 287 SEEGLKRVLDFFMNKWDWTREEIYRYPIVLILSFEKRVMPRSSILQHLISKGLIKRKSLG 346
           S+E +   L++ +N       +I   P+VL LS EKR+ PR+ ++  L+SKGL+K++ + 
Sbjct: 298 SDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDIN 357

Query: 347 --LALKISEHEFLEKFVMQYLSEDPHLLEMYQEKK 379
               LK+   EF++KFV++Y  E P L++ +   +
Sbjct: 358 YFTILKLKSSEFMDKFVLKYQDEMPQLVQPFTSNR 390

[Close]
BLAST of CSPI02G24870 vs. TAIR10
Match: AT1G61990.1 (AT1G61990.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 122.1 bits (305), Expect = 7.5e-28
Identity = 95/370 (25.68%), Postives = 169/370 (45.68%), Query Frame = 1 

Query: 47  TLDYLIHTIGLSKDSALAAAKKIHLKPSSDPDSVLALFNAYGFTPSQTANIFCRQPRLLL 106
           T+ YL+ ++GLSK  A + ++K+  +   +PDSVL+LF +YGFT SQ + I    P LL+
Sbjct: 54  TVSYLVDSLGLSKKLAESISRKVSFEDKVNPDSVLSLFRSYGFTDSQISTIITDYPLLLV 113

Query: 107 ADPDKTLKPKFEFLSKNGISGNFLVDLICREPHILRRSLDKKIVPCIDFLINFF-GSTDC 166
           AD  K L  K + L   G S + + +++   P IL +   K I    D + +     T  
Sbjct: 114 ADAKKALGRKLQILQSRGASSSEITEIVSTVPRILGK---KSITVYYDAVKDIIVADTSS 173

Query: 167 IVSLFCTTQRTRVLHTFSEFMAPNIEVLRANGVLDSSIAKLFWKR--PVALSRDVKWFTD 226
              L   +Q  ++          N+  LR  G+    +  L   +  PV    +   F  
Sbjct: 174 SYELPQGSQGNKI---------RNVSALRELGMPSRLLLPLLVSKSQPVCGKEN---FDA 233

Query: 227 IVEKTKERGFNPSSLMFINGLCIVSSMSKDRWLSKLHIFRSYGWLDEQFQSMFLKQPCFM 286
            ++K  E GF+P++  F+  L ++  MS+     K+ +FRS G+  +    +F K P  +
Sbjct: 234 SLKKVVEMGFDPTTTKFVLALRMLYQMSEKTIEEKVVVFRSLGFTVDDVWEIFKKTPSVL 293

Query: 287 NRSEEGLKRVLDFFMNK-----------------------------------WDWTREEI 346
             S++ + +  + F++                                      W R  +
Sbjct: 294 KVSKKKILKSAETFLDLGYSRAEFLMMVKRYPPCIEYSVESVKKKNEFLVKKMKWPRNAL 353

Query: 347 YRYPIVLILSFEKRVMPRSSILQHLISKGLIKRKS----LGLALKISEHEFLEKFVMQYL 375
             +P V   S EKR++PR +IL+ L+SKGL+++ S    +   L  ++  FL+++VM++ 
Sbjct: 354 VLHPQVFGYSMEKRIIPRCNILEALLSKGLLRKGSELPAVSSVLSCTDEGFLDRYVMKHN 408

[Close]
BLAST of CSPI02G24870 vs. TAIR10
Match: AT1G61980.1 (AT1G61980.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 116.3 bits (290), Expect = 4.1e-26
Identity = 84/283 (29.68%), Postives = 141/283 (49.82%), Query Frame = 1 

Query: 47  TLDYLIHTIGLSKDSALAAAKKIHLKPSSDPDSVLALFNAYGFTPSQTANIFCRQPRLLL 106
           T+ YL+ ++GL K  A + ++K+  +   +PDSVL L  ++GFT SQ + I    P+LL+
Sbjct: 54  TVSYLVDSLGLPKKLAESVSRKVSFEDKDNPDSVLNLLRSHGFTDSQISTIVTDYPQLLV 113

Query: 107 ADPDKTLKPKFEFLSKNGISGNFLVDLICREPHILRRSLDKKIVPCIDFLINFFGSTDCI 166
           AD +K+L PK +FL   G S + L +++   P IL +   K I    DF+          
Sbjct: 114 ADAEKSLAPKLQFLQSRGASSSELTEIVSTVPKILGKRGHKTISVFYDFIKETLLDKSSK 173

Query: 167 VSLFCTTQRTRVLHTFSEFMAPNIEVLRANGVLDSSIAKLFWKRPVALSRDV-----KWF 226
               C       L    E    N+ VLR  G+      KL +  P+ +S DV     + F
Sbjct: 174 SEKSCQPFPQGNL----ENKIRNLSVLRELGMPH----KLLF--PLLISCDVPVFGKEKF 233

Query: 227 TDIVEKTKERGFNPSSLMFINGLCIVSSMSKDRWLSKLHIFRSYGWLDEQFQSMFLKQPC 286
            + ++K  E GF+PS+  F+  LC+V  +S      K++ ++  G+  E   ++F + P 
Sbjct: 234 EESLKKVVEMGFDPSTSKFVEALCVVQRLSDKNIEDKVNAYKRLGFDVEYVWTVFKRWPN 293

Query: 287 FMNRSEEGLKRVLDFFMNKWDWTREE----IYRYPIVLILSFE 321
           F+  SE+ +   ++ F+    ++R+E    I R+P  + LS E
Sbjct: 294 FLTHSEKKILNTIETFLG-LGFSRDEFSVLIKRFPQGIGLSAE 325

[Close]
BLAST of CSPI02G24870 vs. TAIR10
Match: AT1G61970.1 (AT1G61970.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 116.3 bits (290), Expect = 4.1e-26
Identity = 97/387 (25.06%), Postives = 187/387 (48.32%), Query Frame = 1 

Query: 31  NFLSSLSQSPQST------NHRTLDYLIHTIGLSKDSALAAAKKIHLKPSSDPDSVLALF 90
           NF SS S +  S       N+ T+ YL+ ++GL+   A + ++K+  +  ++PDSVL L 
Sbjct: 32  NFFSSASAACLSPRVGRKGNNFTVSYLVDSLGLTTKLAESISRKVSFEDKNNPDSVLNLL 91

Query: 91  NAYGFTPSQTANIFCRQPRLLLADPDKTLKPKFEFLSKNGISGNFLVDLICREPHILRRS 150
            ++GFT SQ + I    P+LL+AD +K+L PK +FL   G S + + +++   P IL + 
Sbjct: 92  TSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKK 151

Query: 151 LDKKIVPCIDFLINFFGSTDCIVSLFCTTQRTRVLHTFS----EFMAPNIEVLRANGVLD 210
             K I    DF+ +          L  +++  ++ H+      E    N+ VLR  G+  
Sbjct: 152 GHKTISVYYDFIKD--------TLLEKSSKNEKLCHSLPQGNLENKIRNVSVLRELGMPH 211

Query: 211 SSIAKLFWKRPVALSRDV---KWFTDIVEKTKERGFNPSSLMFINGLCIVSSMSKDRWLS 270
               KL +   ++ S+ V   + F + ++K  E GF+P++  F+  L ++  M++     
Sbjct: 212 ----KLLFSLLISDSQPVCGKEKFEETLKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEE 271

Query: 271 KLHIFRSYGWLDEQFQSMFLKQPCFMNRSEEGLKRVLDFFMNKWDWTREE----IYRYPI 330
           K+H+++S G+      S F K P  +  SE+ +   ++ F+    ++R+E    +  +P 
Sbjct: 272 KVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLG-LGFSRDEFAKMVKHFPP 331

Query: 331 VLILSFE----------KR----------------------VMPRSSILQHLISKGLIKR 367
            + LS E          K+                      ++PR ++++ L+SKGL++ 
Sbjct: 332 CIGLSTETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRN 391

[Close]
BLAST of CSPI02G24870 vs. NCBI nr
Match: gi|449442098|ref|XP_004138819.1| (PREDICTED: uncharacterized protein LOC101219073 [Cucumis sativus])

HSP 1 Score: 759.6 bits (1960), Expect = 2.6e-216
Identity = 376/382 (98.43%), Postives = 377/382 (98.69%), Query Frame = 1 

Query: 1   MANFLRKPSLLRLYAQDLRNFAHNKTTIGLNFLSSLSQSPQSTNHRTLDYLIHTIGLSKD 60
           MANFLRKPSLLRLYAQDLRNFAHNKTTIGLNFLSSLSQSPQSTNHRTLDYLIHTIGLSKD
Sbjct: 1   MANFLRKPSLLRLYAQDLRNFAHNKTTIGLNFLSSLSQSPQSTNHRTLDYLIHTIGLSKD 60

Query: 61  SALAAAKKIHLKPSSDPDSVLALFNAYGFTPSQTANIFCRQPRLLLADPDKTLKPKFEFL 120
           SALAAAKKIHLKPSSDPDSVLALFNAYGFTPSQTANIFCRQPRLLLADPDKTLKPKFEFL
Sbjct: 61  SALAAAKKIHLKPSSDPDSVLALFNAYGFTPSQTANIFCRQPRLLLADPDKTLKPKFEFL 120

Query: 121 SKNGISGNFLVDLICREPHILRRSLDKKIVPCIDFLINFFGSTDCIVSLFCTTQRTRVLH 180
           SKNGISGNFLVDLICREPHILRRSLDKKIVPC DFLINFFGSTDCIVSLFCTT RTRVLH
Sbjct: 121 SKNGISGNFLVDLICREPHILRRSLDKKIVPCFDFLINFFGSTDCIVSLFCTTHRTRVLH 180

Query: 181 TFSEFMAPNIEVLRANGVLDSSIAKLFWKRPVALSRDVKWFTDIVEKTKERGFNPSSLMF 240
           TFSEFMAPNIEVLRANGV DSSIAKLFWKRPVALSRDVKWFTDIVEKTKERGFNPSSLMF
Sbjct: 181 TFSEFMAPNIEVLRANGVPDSSIAKLFWKRPVALSRDVKWFTDIVEKTKERGFNPSSLMF 240

Query: 241 INGLCIVSSMSKDRWLSKLHIFRSYGWLDEQFQSMFLKQPCFMNRSEEGLKRVLDFFMNK 300
           INGLCIVSSMSKDRWLSKLHIFRSYGW DEQFQSMFLKQPCFMNRSEEGLKR LDFFMNK
Sbjct: 241 INGLCIVSSMSKDRWLSKLHIFRSYGWSDEQFQSMFLKQPCFMNRSEEGLKRALDFFMNK 300

Query: 301 WDWTREEIYRYPIVLILSFEKRVMPRSSILQHLISKGLIKRKSLGLALKISEHEFLEKFV 360
           WDWTREEIYRYPIVLILSFEKRVMPRSSILQHLISKGLIKRKSLG+ALKISEHEFLEKFV
Sbjct: 301 WDWTREEIYRYPIVLILSFEKRVMPRSSILQHLISKGLIKRKSLGMALKISEHEFLEKFV 360

Query: 361 MQYLSEDPHLLEMYQEKKKIAI 383
           MQYLSEDPHLLEMYQEKKKIAI
Sbjct: 361 MQYLSEDPHLLEMYQEKKKIAI 382

[Close]
BLAST of CSPI02G24870 vs. NCBI nr
Match: gi|778670382|ref|XP_004143080.2| (PREDICTED: uncharacterized protein LOC101214641 [Cucumis sativus])

HSP 1 Score: 607.8 bits (1566), Expect = 1.3e-170
Identity = 301/382 (78.80%), Postives = 339/382 (88.74%), Query Frame = 1 

Query: 1   MANFLRKPSLLRLYAQDLRNFAHNKTTIGLNFLSSLSQSPQSTNHRTLDYLIHTIGLSKD 60
           M NFL KPSLLRL+AQDLR+F HN TTIGL FLSSLSQ+PQSTN  T+DYLIHTIGLSK 
Sbjct: 1   MTNFLLKPSLLRLFAQDLRDFTHNNTTIGLKFLSSLSQTPQSTNDPTVDYLIHTIGLSKA 60

Query: 61  SALAAAKKIHLKPSSDPDSVLALFNAYGFTPSQTANIFCRQPRLLLADPDKTLKPKFEFL 120
           SALAAAK+I LKP++ PDSVLALFNAYGFTPS  A+IF R+P LLLA+PD TLKPKFEFL
Sbjct: 61  SALAAAKQIRLKPTAHPDSVLALFNAYGFTPSHIASIFSRRPSLLLANPDTTLKPKFEFL 120

Query: 121 SKNGISGNFLVDLICREPHILRRSLDKKIVPCIDFLINFFGSTDCIVSLFCTTQRTRVLH 180
           S+NGISGNFL D+I R+P IL RSLDK+IVPCIDFLINFFGSTDCIVSLF T  RTRVLH
Sbjct: 121 SRNGISGNFLADVIDRDPLILCRSLDKQIVPCIDFLINFFGSTDCIVSLFSTAHRTRVLH 180

Query: 181 TFSEFMAPNIEVLRANGVLDSSIAKLFWKRPVALSRDVKWFTDIVEKTKERGFNPSSLMF 240
           TFSEF+APNIEVLRANGVLDS+IAKL W RP+ALSRDV+WFTDIVEKT+ERGFNPSSLMF
Sbjct: 181 TFSEFVAPNIEVLRANGVLDSNIAKLLWMRPIALSRDVEWFTDIVEKTRERGFNPSSLMF 240

Query: 241 INGLCIVSSMSKDRWLSKLHIFRSYGWLDEQFQSMFLKQPCFMNRSEEGLKRVLDFFMNK 300
           I+GLC +SSMSKD+WLSKLH+FRS+GW DEQFQSMFLK+P  MN SEE LKR LDFF+ K
Sbjct: 241 IHGLCTLSSMSKDKWLSKLHLFRSFGWSDEQFQSMFLKKPFVMNSSEEHLKRALDFFVIK 300

Query: 301 WDWTREEIYRYPIVLILSFEKRVMPRSSILQHLISKGLIKRKSLGLALKISEHEFLEKFV 360
           WDWT E+I +Y ++L  S EKR++PRSSILQHLISKG IKRKS+G AL   EH+FLEKFV
Sbjct: 301 WDWTWEDISKYSLLLNFSLEKRLIPRSSILQHLISKGFIKRKSVGSALNSPEHKFLEKFV 360

Query: 361 MQYLSEDPHLLEMYQEKKKIAI 383
           M+YLSEDP+LLEMYQEKKK+A+
Sbjct: 361 MKYLSEDPNLLEMYQEKKKMAL 382

[Close]
BLAST of CSPI02G24870 vs. NCBI nr
Match: gi|659068543|ref|XP_008444984.1| (PREDICTED: uncharacterized protein LOC103488160 [Cucumis melo])

HSP 1 Score: 589.7 bits (1519), Expect = 3.6e-165
Identity = 294/382 (76.96%), Postives = 334/382 (87.43%), Query Frame = 1 

Query: 1   MANFLRKPSLLRLYAQDLRNFAHNKTTIGLNFLSSLSQSPQSTNHRTLDYLIHTIGLSKD 60
           MAN L KPSLLRL+AQDL+NF HN TTIGL  LSSLSQ+PQSTN RTLDYL+HTIGL KD
Sbjct: 1   MANSLLKPSLLRLFAQDLQNFTHNNTTIGLKLLSSLSQTPQSTNDRTLDYLVHTIGLPKD 60

Query: 61  SALAAAKKIHLKPSSDPDSVLALFNAYGFTPSQTANIFCRQPRLLLADPDKTLKPKFEFL 120
           SALAAAKK  LKP++DPDSVLALFNAYGFTPS  A+IF +Q RLLLA+PD TLKPK EFL
Sbjct: 61  SALAAAKKTRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSRLLLANPDTTLKPKLEFL 120

Query: 121 SKNGISGNFLVDLICREPHILRRSLDKKIVPCIDFLINFFGSTDCIVSLFCTTQRTRVLH 180
           SKNGISGN LV++ICR+P+IL RSLDK+IVPCIDFL NFFGSTD +V LF     TRVL 
Sbjct: 121 SKNGISGNLLVNVICRDPYILSRSLDKQIVPCIDFLRNFFGSTDGVVLLFSAGGGTRVLE 180

Query: 181 TFSEFMAPNIEVLRANGVLDSSIAKLFWKRPVALSRDVKWFTDIVEKTKERGFNPSSLMF 240
           TFSE MAPNIEVLRANGVLDS+IAK+   RP+ALSRDV+ F DIVEK KE G NPSSLMF
Sbjct: 181 TFSESMAPNIEVLRANGVLDSNIAKMLSLRPIALSRDVENFIDIVEKAKEIGLNPSSLMF 240

Query: 241 INGLCIVSSMSKDRWLSKLHIFRSYGWLDEQFQSMFLKQPCFMNRSEEGLKRVLDFFMNK 300
           I+GLC++SSMSKD+WLSK+H+F+S+GW DEQFQSMFLKQP FM RSEE LKR+LDFFMNK
Sbjct: 241 IHGLCMISSMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNK 300

Query: 301 WDWTREEIYRYPIVLILSFEKRVMPRSSILQHLISKGLIKRKSLGLALKISEHEFLEKFV 360
           WDWTRE+I +Y ++L LS EKRV+PRSSI++HLISKG IKRKS G+AL+  EHEFLEKFV
Sbjct: 301 WDWTREDISKYAVLLNLSLEKRVIPRSSIVRHLISKGFIKRKSFGIALQRPEHEFLEKFV 360

Query: 361 MQYLSEDPHLLEMYQEKKKIAI 383
           M+YLS+DPHLLEMYQEKKK+AI
Sbjct: 361 MKYLSKDPHLLEMYQEKKKMAI 382

[Close]
BLAST of CSPI02G24870 vs. NCBI nr
Match: gi|659089103|ref|XP_008445328.1| (PREDICTED: uncharacterized protein LOC103488393 [Cucumis melo])

HSP 1 Score: 580.1 bits (1494), Expect = 2.9e-162
Identity = 291/383 (75.98%), Postives = 329/383 (85.90%), Query Frame = 1 

Query: 1   MANFLRKPSLLRLYAQDLRNFAHNKTTIGLNFLSSLSQSPQSTNHRTLDYLIHTIGLSKD 60
           MAN L KPSLLR +AQDLRNF HN TTIGL FLSSLSQ+PQSTN RT DYL+HTIGL KD
Sbjct: 1   MANSLLKPSLLRPFAQDLRNFTHNNTTIGLKFLSSLSQTPQSTNDRTQDYLVHTIGLPKD 60

Query: 61  SALAAAKKIHLKPSSDPDSVLALFNAYGFTPSQTANIFCRQPRLLLADPDKTLKPKFEFL 120
           SALAAAKKI LKP++DPDSVLALFNAYGFTPS  A+IF +Q  LLLADPD TLKPK EFL
Sbjct: 61  SALAAAKKIRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSCLLLADPDTTLKPKIEFL 120

Query: 121 SKNGISGNFLVDLICREPHILRRSLDKKIVPCIDFLINFFGSTDCIVSLFCTTQRTRVLH 180
           SKNGISGN L D+ICR+PHIL RSLDK+IVPCIDFLINFFGSTD +V LF     TRVL 
Sbjct: 121 SKNGISGNLLADVICRDPHILHRSLDKQIVPCIDFLINFFGSTDGVVLLFSAGGGTRVLE 180

Query: 181 TFSEFMAPNIEVLRANGVLDSSIAKLFWKRPVALSRDVKWFTDIVEKTKERGFNPSSLMF 240
           TFSE MAPN+EVLRANGV DS+IAK+   RP+ALS+DV+ F DIVEKTKE G NPSSLMF
Sbjct: 181 TFSESMAPNVEVLRANGVPDSNIAKMLSLRPIALSKDVEHFIDIVEKTKEMGLNPSSLMF 240

Query: 241 INGLCIVSSMSKDRWLSKLHIFRSYGWLDEQFQSMFLKQPCFMNRSEEGLKRVLDFFMNK 300
           I+G+C+++SMSKD+WLSK+H+F+S+GW DEQFQSMFLKQP FM RSEE LKR+LDFFMNK
Sbjct: 241 IHGMCMIASMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNK 300

Query: 301 WDWTREEIYRYPIVLILSFEKRVMPRSSILQHLISKGLIKRKSLGLALKISEHEFLEKFV 360
           WDWT E++ +YP++L LS EKRV+PRSSI+Q LISKG IKRKS G AL+  E  FLEKFV
Sbjct: 301 WDWTLEDVSKYPVLLNLSLEKRVIPRSSIVQRLISKGFIKRKSFGKALQRPEQWFLEKFV 360

Query: 361 MQYLSEDPHLLEMYQE-KKKIAI 383
           M+YLSEDPHLLEMYQE KKK+AI
Sbjct: 361 MKYLSEDPHLLEMYQETKKKMAI 383

[Close]
BLAST of CSPI02G24870 vs. NCBI nr
Match: gi|1009119129|ref|XP_015876211.1| (PREDICTED: uncharacterized protein LOC107412900 [Ziziphus jujuba])

HSP 1 Score: 355.1 bits (910), Expect = 1.5e-94
Identity = 186/362 (51.38%), Postives = 248/362 (68.51%), Query Frame = 1 

Query: 24  NKTTIG----LNFLSSLSQSPQSTNHRTLDYLIHTIGLSKDSALAAAKKIHLKPSSDPDS 83
           N   IG    L  LS+LS    S++  T+DY I+++GLS DSAL AAK I  +P++  DS
Sbjct: 26  NSNAIGQQLFLKSLSTLSPPSSSSSDSTVDYFINSLGLSPDSALTAAKLIRRQPTAKSDS 85

Query: 84  VLALFNAYGFTPSQTANIFCRQPRLLLADPDKTLKPKFEFLSKNGISGNFLVDLICREPH 143
           VL LF  YGF+ +Q A+IF R P LLL+DP K LKPK EFLSKNGISG  L+ ++  +P 
Sbjct: 86  VLELFRHYGFSSAQIADIFSRFPSLLLSDPQKNLKPKLEFLSKNGISGQALLSIVSTDPT 145

Query: 144 ILRRSLDKKIVPCIDFLINFFGSTDC-IVSLFCTTQRTRVLHTFSEFMAPNIEVLRANGV 203
           IL RSL+K+I PCI FL  FF +    IVSL    + T V+H FSE MAPNIE LR++GV
Sbjct: 146 ILLRSLNKQIEPCIGFLKTFFKNNKAEIVSLLSVKRGTWVIHKFSETMAPNIETLRSHGV 205

Query: 204 LDSSIAKLFWKRPVALSRDVKWFTDIVEKTKERGFNPSSLMFINGLCIVSSMSKDRWLSK 263
            D+ I K+   RP ALSR    F++ V   KE GF+PSS+MFI+G+C  S M KD+W+SK
Sbjct: 206 SDACIKKMIIVRPAALSRFADDFSEFVRVVKEMGFDPSSVMFIHGVCTFSGMKKDKWVSK 265

Query: 264 LHIFRSYGWLDEQFQSMFLKQPCFMNRSEEGLKRVLDFFMNKWDWTREEIYRYPIVLILS 323
           + +F+ +GW +E+ +S+ +KQP  MN S E L + LDFFMNK  W+ ++I +YP VL+LS
Sbjct: 266 MEVFKRFGWSEEEVRSLVVKQPKVMNSSSERLSKSLDFFMNKLGWSVDDISKYPTVLLLS 325

Query: 324 FEKRVMPRSSILQHLISKGLIKRKSLGLALKISEHEFLEKFVMQYLSEDPHLLEMYQEKK 381
           FE+RV PRS IL+ LISKG I +K +G    + E +FL+ FVM+Y  + P LL+MYQ KK
Sbjct: 326 FERRVFPRSIILKFLISKGHIDKKKMGSGFILPEDKFLKNFVMEYEEKLPQLLDMYQSKK 385

The following BLAST results are available for this feature:
BLAST of CSPI02G24870 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI02G24870 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LQN0_CUCSA1.8e-21698.43Uncharacterized protein OS=Cucumis sativus GN=Csa_2G402010 PE=4 SV=1[more]
A0A0A0LK19_CUCSA8.9e-17178.80Uncharacterized protein OS=Cucumis sativus GN=Csa_2G346010 PE=4 SV=1[more]
M5XIM3_PRUPE1.0e-8148.64Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa018608mg PE=4 S... [more]
A0A059AA44_EUCGR8.3e-7642.94Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00314 PE=4 SV=1[more]
A0A059A9T0_EUCGR8.3e-7642.94Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00314 PE=4 SV=1[more]
BLAST of CSPI02G24870 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G07900.16.1e-4633.03 Mitochondrial transcription termination factor family protein[more]
AT1G21150.11.3e-4329.25 Mitochondrial transcription termination factor family protein[more]
AT1G61990.17.5e-2825.68 Mitochondrial transcription termination factor family protein[more]
AT1G61980.14.1e-2629.68 Mitochondrial transcription termination factor family protein[more]
AT1G61970.14.1e-2625.06 Mitochondrial transcription termination factor family protein[more]
BLAST of CSPI02G24870 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449442098|ref|XP_004138819.1|2.6e-21698.43PREDICTED: uncharacterized protein LOC101219073 [Cucumis sativus][more]
gi|778670382|ref|XP_004143080.2|1.3e-17078.80PREDICTED: uncharacterized protein LOC101214641 [Cucumis sativus][more]
gi|659068543|ref|XP_008444984.1|3.6e-16576.96PREDICTED: uncharacterized protein LOC103488160 [Cucumis melo][more]
gi|659089103|ref|XP_008445328.1|2.9e-16275.98PREDICTED: uncharacterized protein LOC103488393 [Cucumis melo][more]
gi|1009119129|ref|XP_015876211.1|1.5e-9451.38PREDICTED: uncharacterized protein LOC107412900 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003690MTERF
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003690double-stranded DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005575 cellular_component
molecular_function GO:0003690 double-stranded DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G24870.1CSPI02G24870.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 138..356
score: 2.0E-22coord: 81..219
score: 1.7
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 305..339
score: 130.0coord: 204..234
score: 970.0coord: 95..126
score: 0.0013coord: 131..163
score: 0.067coord: 273..304
score:
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 9..382
score: 4.9E
NoneNo IPR availablePANTHERPTHR13068:SF28MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN-RELATEDcoord: 9..382
score: 4.9E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI02G24870Csa2G402010Cucumber (Chinese Long) v2cpicuB065
CSPI02G24870CsaV3_2G033390Cucumber (Chinese Long) v3cpicucB081
CSPI02G24870Cucsa.088410Cucumber (Gy14) v1cgycpiB093
CSPI02G24870CsGy2G024600Cucumber (Gy14) v2cgybcpiB057
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI02G24870Silver-seed gourdcarcpiB0018
CSPI02G24870Silver-seed gourdcarcpiB1119
CSPI02G24870Watermelon (97103) v2cpiwmbB106
CSPI02G24870Wax gourdcpiwgoB161
CSPI02G24870Cucurbita maxima (Rimu)cmacpiB281
CSPI02G24870Cucurbita maxima (Rimu)cmacpiB702
CSPI02G24870Cucurbita moschata (Rifu)cmocpiB271
CSPI02G24870Cucurbita moschata (Rifu)cmocpiB695
CSPI02G24870Melon (DHL92) v3.5.1cpimeB116
CSPI02G24870Watermelon (Charleston Gray)cpiwcgB112
CSPI02G24870Watermelon (97103) v1cpiwmB167
CSPI02G24870Cucurbita pepo (Zucchini)cpecpiB168
CSPI02G24870Cucurbita pepo (Zucchini)cpecpiB385
CSPI02G24870Bottle gourd (USVL1VR-Ls)cpilsiB113
CSPI02G24870Melon (DHL92) v3.6.1cpimedB112