CSPI02G24460 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI02G24460
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionFanconi anemia group M
LocationChr2 : 20994766 .. 20996879 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTCTGATTGACACAATGCAACACTTGCAAGGACTGCATTTTTCTAGGGAATCTGAATCATTCTCTGTTGCACGTAAGATAACTATAACACTTATGGATGACAAATAGACATATGTTCACTTTTACATTTCTCAAATAATGCCAATTTTGAGTGGGAGCTTTAATTAGTGTTTTCTATATTTGCGGAACAAGAAACATTTTTTCTCCTCTTCATTTGTGACTTTGTTGGTGACAACGCAATGTTAAACATAAACTGAATTCATTATGGTAGGGTGTTTCTAATAATACTTCGTCAAAAAATCATGATAATTTATTTTCTTATGATCAAAGTTTTGATTATTTTATAGAGTCAATAAATGAAGTCAACGCATCAAAAGCAGAATTAGAAGTGCCATTAGTGTATCCTGAAGTCTCACTACCCCAAAATTCTGCAGAAAACAATTGTATTTCTGGTTGCTGTTCTCCCAAACATTCTACAATAGACCTCATTGGTTCAGGTTTGATATCTGTTGATGCCATGGGAAATGACCAAATATCATGTTTCCTCGTGTTCTCTTCAAAATATTGATTGCATTCCTATTCTGTTGTTGTAGGTAGCAAATTATTGAATTTTTCTGAGCCAGGTTCTTACTGTGTAAGAACTGCTCAGGACTTAATTGTGCCAACTGAAGCTGTCATCAAGCAGACAACTTCACAAACAAAAATCTTACCTGATGAGTTTTTTCCAAGCCCTGAAACAGATTGTGTTCCTGTCTTGGAGGACAAAGCAATGAATCTGATTGAGACAAATCATCAAAACACTTTCTTGAAGAGGATTTTTTTAATAAAGATACTGTCGATGAAAAACTTGTTCTGGAAATCGAGCCGCAATTCACCCCGGCTGACGAATTCAGTATTACTGAGACTCAGCTTAGTCCTCGTCTCACTAATTTAATCGAGAGTGGTTTTGTACCAGATTCACCAATTGATGATTGTGGTACATGCTATTTTCCAAGATAATACATTATGTTCTATTAATAAAGAGGGAATATTCCACTGTTCTTTGATTTCTCTAATGATGACAAGAATCCATACATACTAATGGGGGTTTTATTTTTCAGGATATTCTAGACAACGGATATCTGAATCAGCAAAATCCCAGTTTATTTTGCCTGCCCAAGTGGATGGTCTACAGCTTTTAAACTCCTCAAGTTCTGGGATAAATGAAATGATTAATTGTAATGCGGGCTTTTGTGCTGGAAATGATATTTTTCTCGCAAGCAGTGAAGGTCAATCTTCTGCACTCAAGGATAATGAGAGCGTGGGTATAAAATCACATGCCCCTACATCTCCTATGGCTGATGAAATACAAACTCCCTTGGCTACTATTGCAAGCAGTTGTGATAATGAAGTTTGGGATTCAGTTAATGGAGAAAAGTTTAGCAGTGTACCGAAACCCCACAAATTCAAAAGATTGCGAAAGGTTGGAGACATGAAGAAAAATGAAAACATTGAAAGCATGGCAAAAACTTCAATTTCTCCATTGGGAAATATGGTTGGAACTTTTTCTAGCACCAGACAATTTAAAAAAAAGAAACGGGATGGTATCTTCTCTCTCTCATTGTTCAATTTTTGGAATCTTGTCCCAAATGTTTTCAAGAGATCTAATAGAGAAAACATTCGAACAAATAACTCTTTCCTATTTGCTAATTGTCAATTCAATTGCTGCTTTTAGGTGAAAGGAGATTTGACGACAATGTTAAAGCATTTATCGAGGAGGAAGCTGAGTAAGTCCAATAATTACCTCGTTAAAAGGAAAAAAATCTAGTAAATGAGATTAGTGTTAAATTTAAATATACCTTTGGTAATGATATGGTAGTTTTACCTTGACTTCACAAGTTAAAAGGAGATGATACAGTGGTGAATATCTGCCCCATTTCTTGTTGGCATCTAGGGTGTCTTCGGATGCTACCATATCTGGGGATGAAGATGACAACATTAAGAGCTCGTCTGATAGTTTCATAGATGATAGGGTCAATGCTAGTGCCTCGAGTACTCAAGATGGAACAAGCAAACCTGATATGATGGCAATTTACAGGTTTCTATTAATCTCATATTTCTCTGTTATTTAA

mRNA sequence

ATGGTTCTGATTGACACAATGCAACACTTGCAAGGACTGCATTTTTCTAGGGAATCTGAATCATTCTCTGTTGCACAGTCAATAAATGAAGTCAACGCATCAAAAGCAGAATTAGAAGTGCCATTAGTGTATCCTGAAGTCTCACTACCCCAAAATTCTGCAGAAAACAATTGTATTTCTGGTTGCTGTTCTCCCAAACATTCTACAATAGACCTCATTGGTTCAGGTAGCAAATTATTGAATTTTTCTGAGCCAGGTTCTTACTGTGTAAGAACTGCTCAGGACTTAATTGTGCCAACTGAAGCTGTCATCAAGCAGACAACTTCACAAACAAAAATCTTACCTGATGAGTTTTTTCCAAGCCCTGAAACAGATTGTGTTCCTCCGCAATTCACCCCGGCTGACGAATTCAGTATTACTGAGACTCAGCTTAGTCCTCGTCTCACTAATTTAATCGAGAGTGGTTTTGTACCAGATTCACCAATTGATGATTGTGGATATTCTAGACAACGGATATCTGAATCAGCAAAATCCCAGTTTATTTTGCCTGCCCAAGTGGATGGTCTACAGCTTTTAAACTCCTCAAGTTCTGGGATAAATGAAATGATTAATTGTAATGCGGGCTTTTGTGCTGGAAATGATATTTTTCTCGCAAGCAGTGAAGGTCAATCTTCTGCACTCAAGGATAATGAGAGCGTGGGTATAAAATCACATGCCCCTACATCTCCTATGGCTGATGAAATACAAACTCCCTTGGCTACTATTGCAAGCAGTTGTGATAATGAAGTTTGGGATTCAGTTAATGGAGAAAAGTTTAGCAGTGTACCGAAACCCCACAAATTCAAAAGATTGCGAAAGGTTGGAGACATGAAGAAAAATGAAAACATTGAAAGCATGGCAAAAACTTCAATTTCTCCATTGGGAAATATGGTTGGAACTTTTTCTAGCACCAGACAATTTAAAAAAAAGAAACGGGATGGTGAAAGGAGATTTGACGACAATGTTAAAGCATTTATCGAGGAGGAAGCTGAGGTGTCTTCGGATGCTACCATATCTGGGGATGAAGATGACAACATTAAGAGCTCGTCTGATAGTTTCATAGATGATAGGGTCAATGCTAGTGCCTCGAGTACTCAAGATGGAACAAGCAAACCTGATATGATGGCAATTTACAGGTTTCTATTAATCTCATATTTCTCTGTTATTTAA

Coding sequence (CDS)

ATGGTTCTGATTGACACAATGCAACACTTGCAAGGACTGCATTTTTCTAGGGAATCTGAATCATTCTCTGTTGCACAGTCAATAAATGAAGTCAACGCATCAAAAGCAGAATTAGAAGTGCCATTAGTGTATCCTGAAGTCTCACTACCCCAAAATTCTGCAGAAAACAATTGTATTTCTGGTTGCTGTTCTCCCAAACATTCTACAATAGACCTCATTGGTTCAGGTAGCAAATTATTGAATTTTTCTGAGCCAGGTTCTTACTGTGTAAGAACTGCTCAGGACTTAATTGTGCCAACTGAAGCTGTCATCAAGCAGACAACTTCACAAACAAAAATCTTACCTGATGAGTTTTTTCCAAGCCCTGAAACAGATTGTGTTCCTCCGCAATTCACCCCGGCTGACGAATTCAGTATTACTGAGACTCAGCTTAGTCCTCGTCTCACTAATTTAATCGAGAGTGGTTTTGTACCAGATTCACCAATTGATGATTGTGGATATTCTAGACAACGGATATCTGAATCAGCAAAATCCCAGTTTATTTTGCCTGCCCAAGTGGATGGTCTACAGCTTTTAAACTCCTCAAGTTCTGGGATAAATGAAATGATTAATTGTAATGCGGGCTTTTGTGCTGGAAATGATATTTTTCTCGCAAGCAGTGAAGGTCAATCTTCTGCACTCAAGGATAATGAGAGCGTGGGTATAAAATCACATGCCCCTACATCTCCTATGGCTGATGAAATACAAACTCCCTTGGCTACTATTGCAAGCAGTTGTGATAATGAAGTTTGGGATTCAGTTAATGGAGAAAAGTTTAGCAGTGTACCGAAACCCCACAAATTCAAAAGATTGCGAAAGGTTGGAGACATGAAGAAAAATGAAAACATTGAAAGCATGGCAAAAACTTCAATTTCTCCATTGGGAAATATGGTTGGAACTTTTTCTAGCACCAGACAATTTAAAAAAAAGAAACGGGATGGTGAAAGGAGATTTGACGACAATGTTAAAGCATTTATCGAGGAGGAAGCTGAGGTGTCTTCGGATGCTACCATATCTGGGGATGAAGATGACAACATTAAGAGCTCGTCTGATAGTTTCATAGATGATAGGGTCAATGCTAGTGCCTCGAGTACTCAAGATGGAACAAGCAAACCTGATATGATGGCAATTTACAGGTTTCTATTAATCTCATATTTCTCTGTTATTTAA
Homology
[Close]
BLAST of CSPI02G24460 vs. TrEMBL
Match: A0A0A0LQJ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G393190 PE=4 SV=1)

HSP 1 Score: 661.8 bits (1706), Expect = 5.5e-187
Identity = 362/435 (83.22%), Postives = 371/435 (85.29%), Query Frame = 1 

Query: 1   MVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCIS 60
           MVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCIS
Sbjct: 251 MVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCIS 310

Query: 61  GCCSPKHSTIDLIGSGSKLLNFSEPG-------------SYCV---RTAQDLIVPTEAVI 120
           GCCSPKHSTID+IGSGSKLLNFSEPG             +  V    T+Q  I+P E   
Sbjct: 311 GCCSPKHSTIDIIGSGSKLLNFSEPGSYCVRTAQDLIVPTEAVIKQTTSQTKILPDEFFP 370

Query: 121 KQTTSQTKILPDEFFPSPETDC----------------------VPPQFTPADEFSITET 180
              T    +L D+     ET+                       + PQFTPADEFSITET
Sbjct: 371 SPETDCVPVLEDKAMNLIETNHQNTLLKRIFFNKDTVDEKLVLEIEPQFTPADEFSITET 430

Query: 181 QLSPRLTNLIESGFVPDSPIDDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEM 240
           QLSPRLTNLIESGFVPDSPIDDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEM
Sbjct: 431 QLSPRLTNLIESGFVPDSPIDDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEM 490

Query: 241 INCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNE 300
           INCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNE
Sbjct: 491 INCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNE 550

Query: 301 VWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKK 360
           VWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKK
Sbjct: 551 VWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKK 610

Query: 361 KKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSSSDSFIDDRVNASASSTQDGT 398
           KKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSSSDSFIDDRVNASASSTQDGT
Sbjct: 611 KKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSSSDSFIDDRVNASASSTQDGT 670

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BLAST of CSPI02G24460 vs. TrEMBL
Match: F6GY81_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0075g00130 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 3.1e-41
Identity = 148/408 (36.27%), Postives = 219/408 (53.68%), Query Frame = 1 

Query: 2   VLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISG 61
           +LID MQHLQGL FS  S++F V   ++  N       V       S+ + +  N   SG
Sbjct: 133 ILIDMMQHLQGLSFSGNSKTFFVEGEVS-TNEHLGVETVEQYDKRQSMEEKAVANLRTSG 192

Query: 62  CCSPKHSTIDLIGSGSKLLNFSEPGSYCVRTAQDLIVPTEAVIKQTTSQTKILPDEFFPS 121
                  T+D     SKL        Y +   +  +   E ++ QT      L  E   +
Sbjct: 193 ---QARCTMDETLLISKL-------HYSLGQQEKKLDGVEEIV-QTPILKGSLSHEGDTA 252

Query: 122 PETDCV--PPQFTPADEFS-ITETQLSPRLTNLIESGFVPDSPIDDCGYSRQRISESAKS 181
            ET      P F  A+    I +T LSPRLTNLI+SG VP+SPI++ G S  R     ++
Sbjct: 253 VETLVANKTPIFLAAESSDDIGDTDLSPRLTNLIKSGVVPESPINESGPSNGR----PRN 312

Query: 182 QFILPAQVDGLQLLNSSS-SGINEMINCNAGFCAGNDIFLASSEGQSSA-LKDNESVGIK 241
           +F++P  V   ++L+    +G NE +  +      + +    S G  S  L+ + S   +
Sbjct: 313 EFLVPDLVSPAKVLSEMLLTGKNEKVTLDVSTSGQDTLNSPISNGMHSPILRPDISAKAR 372

Query: 242 SHAPTSPMADEIQTPLATIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENI 301
              P+SP+ +E++TPLA + ++  ++ W   +G+K +SV +  KFKRLRK GD  +  N+
Sbjct: 373 GSNPSSPIVEEVKTPLANLTNNSCSKDWHLSSGDKSASVKQERKFKRLRKYGDTGQRRNM 432

Query: 302 ESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSSDATISGDED 361
           +SM + SI P GN+  T SS    + K   G+++  DNV+AFIEEEAEVSS+A +S DE+
Sbjct: 433 KSMKENSIDPSGNLAET-SSIIPIRNKHNRGKQKPVDNVRAFIEEEAEVSSEAEVSDDEE 492

Query: 362 D--NIKSSSDSFIDDRVNASASSTQDGTSKPDMMAIYRFLLISYFSVI 403
           D  N  S  DSFIDDR++ +A+STQ   S+ DMMAIYR  L+S   V+
Sbjct: 493 DDQNNNSYDDSFIDDRIDPTATSTQAEDSRSDMMAIYRRSLLSQSPVV 523

[Close]
BLAST of CSPI02G24460 vs. TrEMBL
Match: A0A067GVV8_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g037446mg PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.5e-38
Identity = 108/271 (39.85%), Postives = 166/271 (61.25%), Query Frame = 1 

Query: 132  TPADEF--SITETQLSPRLTNLIESGFVPDSPIDDCGYSRQRISESAKSQFILPAQVDGL 191
            +P DE+   + +++LSPRLTNLI+SG VP+SPI++ G S  +           P ++  +
Sbjct: 881  SPDDEYHNDLRDSELSPRLTNLIKSGVVPESPINENGASNNK---GRNPDLASPVKLCSI 940

Query: 192  QLLNSSSSGINEMINCNAGFCAGN-DIFLASSEGQSSALKDNESVGIKSHAPTSPMADEI 251
            Q    +S G  E  +       GN  I   + + Q+  LK N +     ++PTSP+A+E 
Sbjct: 941  QPSKFASLGKTEKCSKYVRASQGNVSISPVNKKIQTPLLKMNHTASAGGYSPTSPIAEET 1000

Query: 252  QTPLATIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLG 311
            +TPLA +A+S  +  W   +G+K  +V    KFKRLRKV D ++N+N E+M + +++P+ 
Sbjct: 1001 KTPLANLANSSCSRDWRLSSGDKSENVEPARKFKRLRKVRDCEQNKNSENMKENAVAPVV 1060

Query: 312  NMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSSS--DSF 371
            N+   F      + K   G ++  DN++ +IEEEAEVSS+A +S DE+D+  ++S  DSF
Sbjct: 1061 NLARRFLGMSPIQNKHGRGRKKPMDNMREYIEEEAEVSSEAEVSDDEEDDEDNNSYDDSF 1120

Query: 372  IDDRVNASASSTQDGTSKPDMMAIYRFLLIS 398
            IDDR+N +A+STQ  +S  DMMAIYRFLL+S
Sbjct: 1121 IDDRMNPTATSTQAESSGVDMMAIYRFLLLS 1148

[Close]
BLAST of CSPI02G24460 vs. TrEMBL
Match: V4SJC4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10000033mg PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 5.7e-35
Identity = 104/278 (37.41%), Postives = 165/278 (59.35%), Query Frame = 1 

Query: 132  TPADEF--SITETQLSPRLTNLIESGFVPDSPIDDCGYSRQRISESAKSQFILPAQVDGL 191
            +P DE+   + +++LSPRLTNLI+SG VP+SPI++ G S  +           P ++  +
Sbjct: 952  SPDDEYHNDLRDSELSPRLTNLIKSGVVPESPINENGASNNK---GRNPDLASPVKLCSI 1011

Query: 192  QLLNSSSSGINEMINCNAGFCAGN---DIFLASSEGQSSALKDNESVGIKSHAPTSPMAD 251
            Q   S  + + +   C+    A      I   + + Q+  LK N +     ++PTSP+A+
Sbjct: 1012 Q--PSKFASLRKTEKCSKYVRASQRNVSISPVNKKIQTPLLKMNHTASAGGYSPTSPIAE 1071

Query: 252  EIQTPLATIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISP 311
            E +TPLA +A+S  +  W   +G+K  +V    KFKRLRKV D ++N+N E+M + +++P
Sbjct: 1072 ETKTPLANLANSSCSRDWRLSSGDKSENVEPARKFKRLRKVRDCEQNKNSENMKENAVAP 1131

Query: 312  LGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSSS--D 371
            + N+   F      + K   G ++  DN++ +IEEEAEVSS+A +S DE+D+  ++S  D
Sbjct: 1132 VVNLARRFLGMSPIQNKHGRGRKKPMDNMREYIEEEAEVSSEAEVSDDEEDDEDNNSYDD 1191

Query: 372  SFIDDRVNASASSTQDGTSKPDMMAIYRFLLISYFSVI 403
            SFIDD +N +A+STQ  +S  DMMAIYR  L+S   V+
Sbjct: 1192 SFIDDHMNPTATSTQAESSGVDMMAIYRRSLLSQSPVV 1224

[Close]
BLAST of CSPI02G24460 vs. TrEMBL
Match: A0A061FIW1_THECC (DEAD/DEAH box RNA helicase family protein, putative isoform 2 OS=Theobroma cacao GN=TCM_036398 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 3.7e-34
Identity = 127/358 (35.47%), Postives = 189/358 (52.79%), Query Frame = 1 

Query: 75   SGSKLLNFSEPGSYCVRTAQDLIVPTEAVIKQTTSQTKILPDEFFPSP---ETDCVPPQF 134
            S  +L N     +Y V+T+ D I+ TEAV   TTSQTK   D+  P+P   ETD    + 
Sbjct: 668  STKELQNCLNQETYPVKTS-DGIMQTEAVPNVTTSQTKSTKDDTLPTPRFCETDSEKEKM 727

Query: 135  TPADE-----------------------------FSITETQLSPRLTNLIESGFVPDSPI 194
                E                               + +T+LSPRLTNLI+ G VP+SPI
Sbjct: 728  LDGVEKIPGTPGGTCETPDIEEIKAPPPLADEHCCDLQDTELSPRLTNLIKIGVVPESPI 787

Query: 195  DDCGYSRQRI-SESAKSQFILPAQVDGLQLLNSSSSGINEM-INCNAGFCAGNDIFLASS 254
             D G  + +I +ES       PA++    LL SSS   NE  +  N+ +  G ++ +   
Sbjct: 788  TDSGILKHKIRNESLIPDLASPAKLGTELLLRSSSPVENERGVMDNSPY--GRNVSVLKD 847

Query: 255  EGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNEVWDSVNGEKFSSVPKPHK 314
            E   + L     V    H+PTSP+  E +TPLA + +S  ++ W   +GE  +++    K
Sbjct: 848  E--MTPLVKMNPVSSTKHSPTSPLV-ETKTPLAHLTNSSGSKSWHLSSGE-VATLEHAQK 907

Query: 315  FKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIE 374
            FKRLRKVGD  K  + +SM + S+  + N+  +FS     +KK   G+++ +++V+ FI+
Sbjct: 908  FKRLRKVGDCGKARSSKSMKENSLVSVANLAKSFSGASLIRKKHGRGKKKPENDVRTFID 967

Query: 375  EEAEVSSDATISG-DEDDNIKSSSDSFIDDRVNASASSTQDGTSKPDMMAIYRFLLIS 398
            EEAEVS++A IS  +EDD+ +   D FIDDR+  +A S Q  + + DMMAIYR  L+S
Sbjct: 968  EEAEVSTEAEISAEEEDDDNELYDDGFIDDRITPTAGSNQTESGRVDMMAIYRRSLLS 1018

[Close]
BLAST of CSPI02G24460 vs. TAIR10
Match: AT1G35530.2 (AT1G35530.2 DEAD/DEAH box RNA helicase family protein )

HSP 1 Score: 90.9 bits (224), Expect = 1.9e-18
Identity = 92/291 (31.62%), Postives = 140/291 (48.11%), Query Frame = 1 

Query: 134  ADEFSITETQLSPRLTNLIESGFVPDSPIDDCGYSRQRISESAKSQFILPAQVDGLQLLN 193
            +DE      +LSPRLTN I+SG VP+SP+ D G    R  +    Q   P +        
Sbjct: 910  SDEDDCEGLELSPRLTNFIKSGIVPESPVYDQG-EANREEDLEFPQLSSPMRFSNELAGE 969

Query: 194  SSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLA 253
            SS         CN          L + + +       E + +      SP+ ++ +TPLA
Sbjct: 970  SSFPERKVQHKCNDYNIVSTTTELRTPQKEVGLANGTECLAV------SPIPEDWRTPLA 1029

Query: 254  --TIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGD----MKKN-------ENIESMA 313
              T  +S   + W   +GEK  ++ +P K KRLR++GD    +K+N       ++I S +
Sbjct: 1030 NLTNTNSSARKDWRVSSGEKLETLRQPRKLKRLRRLGDCSSAVKENYPGITEADHIRSRS 1089

Query: 314  --------KTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSSDATIS 373
                    K   +     + + +     KKKK       DD+V+ FI+EEAEVSS A +S
Sbjct: 1090 RGKKHIRVKWKSAESWFTLSSVAFALVTKKKK----MIMDDDVQVFIDEEAEVSSGAEMS 1149

Query: 374  GDEDDNIKSSS--DSFIDDRVNASASSTQDGTSKPDMMAIYRFL--LISYF 400
             DE++++   S  DSFIDD    +A +TQ  + K DMMA+YR++   IS+F
Sbjct: 1150 ADENEDVTGDSFEDSFIDDGTMPTA-NTQAESGKVDMMAVYRYIQPKISFF 1188

[Close]
BLAST of CSPI02G24460 vs. NCBI nr
Match: gi|778672808|ref|XP_011649875.1| (PREDICTED: Fanconi anemia group M protein isoform X1 [Cucumis sativus])

HSP 1 Score: 661.8 bits (1706), Expect = 7.8e-187
Identity = 362/435 (83.22%), Postives = 371/435 (85.29%), Query Frame = 1 

Query: 1    MVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCIS 60
            MVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCIS
Sbjct: 727  MVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCIS 786

Query: 61   GCCSPKHSTIDLIGSGSKLLNFSEPG-------------SYCV---RTAQDLIVPTEAVI 120
            GCCSPKHSTID+IGSGSKLLNFSEPG             +  V    T+Q  I+P E   
Sbjct: 787  GCCSPKHSTIDIIGSGSKLLNFSEPGSYCVRTAQDLIVPTEAVIKQTTSQTKILPDEFFP 846

Query: 121  KQTTSQTKILPDEFFPSPETDC----------------------VPPQFTPADEFSITET 180
               T    +L D+     ET+                       + PQFTPADEFSITET
Sbjct: 847  SPETDCVPVLEDKAMNLIETNHQNTLLKRIFFNKDTVDEKLVLEIEPQFTPADEFSITET 906

Query: 181  QLSPRLTNLIESGFVPDSPIDDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEM 240
            QLSPRLTNLIESGFVPDSPIDDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEM
Sbjct: 907  QLSPRLTNLIESGFVPDSPIDDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEM 966

Query: 241  INCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNE 300
            INCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNE
Sbjct: 967  INCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNE 1026

Query: 301  VWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKK 360
            VWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKK
Sbjct: 1027 VWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKK 1086

Query: 361  KKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSSSDSFIDDRVNASASSTQDGT 398
            KKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSSSDSFIDDRVNASASSTQDGT
Sbjct: 1087 KKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSSSDSFIDDRVNASASSTQDGT 1146

[Close]
BLAST of CSPI02G24460 vs. NCBI nr
Match: gi|700207933|gb|KGN63052.1| (hypothetical protein Csa_2G393190 [Cucumis sativus])

HSP 1 Score: 661.8 bits (1706), Expect = 7.8e-187
Identity = 362/435 (83.22%), Postives = 371/435 (85.29%), Query Frame = 1 

Query: 1   MVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCIS 60
           MVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCIS
Sbjct: 251 MVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCIS 310

Query: 61  GCCSPKHSTIDLIGSGSKLLNFSEPG-------------SYCV---RTAQDLIVPTEAVI 120
           GCCSPKHSTID+IGSGSKLLNFSEPG             +  V    T+Q  I+P E   
Sbjct: 311 GCCSPKHSTIDIIGSGSKLLNFSEPGSYCVRTAQDLIVPTEAVIKQTTSQTKILPDEFFP 370

Query: 121 KQTTSQTKILPDEFFPSPETDC----------------------VPPQFTPADEFSITET 180
              T    +L D+     ET+                       + PQFTPADEFSITET
Sbjct: 371 SPETDCVPVLEDKAMNLIETNHQNTLLKRIFFNKDTVDEKLVLEIEPQFTPADEFSITET 430

Query: 181 QLSPRLTNLIESGFVPDSPIDDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEM 240
           QLSPRLTNLIESGFVPDSPIDDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEM
Sbjct: 431 QLSPRLTNLIESGFVPDSPIDDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEM 490

Query: 241 INCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNE 300
           INCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNE
Sbjct: 491 INCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNE 550

Query: 301 VWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKK 360
           VWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKK
Sbjct: 551 VWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKK 610

Query: 361 KKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSSSDSFIDDRVNASASSTQDGT 398
           KKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSSSDSFIDDRVNASASSTQDGT
Sbjct: 611 KKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSSSDSFIDDRVNASASSTQDGT 670

[Close]
BLAST of CSPI02G24460 vs. NCBI nr
Match: gi|778672811|ref|XP_011649876.1| (PREDICTED: Fanconi anemia group M protein isoform X2 [Cucumis sativus])

HSP 1 Score: 661.8 bits (1706), Expect = 7.8e-187
Identity = 362/435 (83.22%), Postives = 371/435 (85.29%), Query Frame = 1 

Query: 1    MVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCIS 60
            MVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCIS
Sbjct: 713  MVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCIS 772

Query: 61   GCCSPKHSTIDLIGSGSKLLNFSEPG-------------SYCV---RTAQDLIVPTEAVI 120
            GCCSPKHSTID+IGSGSKLLNFSEPG             +  V    T+Q  I+P E   
Sbjct: 773  GCCSPKHSTIDIIGSGSKLLNFSEPGSYCVRTAQDLIVPTEAVIKQTTSQTKILPDEFFP 832

Query: 121  KQTTSQTKILPDEFFPSPETDC----------------------VPPQFTPADEFSITET 180
               T    +L D+     ET+                       + PQFTPADEFSITET
Sbjct: 833  SPETDCVPVLEDKAMNLIETNHQNTLLKRIFFNKDTVDEKLVLEIEPQFTPADEFSITET 892

Query: 181  QLSPRLTNLIESGFVPDSPIDDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEM 240
            QLSPRLTNLIESGFVPDSPIDDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEM
Sbjct: 893  QLSPRLTNLIESGFVPDSPIDDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEM 952

Query: 241  INCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNE 300
            INCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNE
Sbjct: 953  INCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNE 1012

Query: 301  VWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKK 360
            VWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKK
Sbjct: 1013 VWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKK 1072

Query: 361  KKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSSSDSFIDDRVNASASSTQDGT 398
            KKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSSSDSFIDDRVNASASSTQDGT
Sbjct: 1073 KKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSSSDSFIDDRVNASASSTQDGT 1132

[Close]
BLAST of CSPI02G24460 vs. NCBI nr
Match: gi|659081087|ref|XP_008441145.1| (PREDICTED: Fanconi anemia group M protein isoform X1 [Cucumis melo])

HSP 1 Score: 643.3 bits (1658), Expect = 2.9e-181
Identity = 347/435 (79.77%), Postives = 364/435 (83.68%), Query Frame = 1 

Query: 1    MVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCIS 60
            MVLI+TMQHLQGLHFSRESESFS+AQS NEVN SKAELE PLVYPEVSLPQNSAENNCIS
Sbjct: 728  MVLINTMQHLQGLHFSRESESFSIAQSRNEVNTSKAELETPLVYPEVSLPQNSAENNCIS 787

Query: 61   GCCSPKHSTIDLIGSGSKLLNFSEPGSYCVRTAQDLIVPTEAVIKQTTSQTKILPDEFFP 120
             CCSPKHSTIDL+GSGSKLL+ SEPGSYCVRTAQDLIVPTEAV ++TTSQTKILPDE FP
Sbjct: 788  RCCSPKHSTIDLVGSGSKLLSSSEPGSYCVRTAQDLIVPTEAVNERTTSQTKILPDEIFP 847

Query: 121  SPETDCVP-------------PQFTPADEFSITETQLSPRLTNLIE-------------- 180
            SPETDCVP              Q TP       +  +  +L   IE              
Sbjct: 848  SPETDCVPVLEDKAMNLIEKNHQNTPLKRTFFNKDTVDEKLVLEIEPQFTPADECCITET 907

Query: 181  -----------SGFVPDSPIDDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEM 240
                       SGFVPDSPIDDCGYSRQRISESAKSQ ILPAQVDGLQLLNSSSSGINEM
Sbjct: 908  QLSPRLTNLIESGFVPDSPIDDCGYSRQRISESAKSQLILPAQVDGLQLLNSSSSGINEM 967

Query: 241  INCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNE 300
            INCN GFCAGN IFLASSEGQSSALKDNESVGIKSHAPTS +ADEIQTPLA IASSCDNE
Sbjct: 968  INCNGGFCAGNYIFLASSEGQSSALKDNESVGIKSHAPTSSVADEIQTPLAIIASSCDNE 1027

Query: 301  VWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKK 360
            VWDSVNGEKFSS+PKPHKFKRLRKVGDMKKNEN+ESMAKTSISPLGNMVGTFSSTRQFK+
Sbjct: 1028 VWDSVNGEKFSSIPKPHKFKRLRKVGDMKKNENVESMAKTSISPLGNMVGTFSSTRQFKR 1087

Query: 361  KKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSSSDSFIDDRVNASASSTQDGT 398
            KKRDGER+FDDNVKAFIEEEAEVSSDAT+SGDEDD IKSS DSFIDDRV+ASASSTQD T
Sbjct: 1088 KKRDGERKFDDNVKAFIEEEAEVSSDATLSGDEDDKIKSSFDSFIDDRVSASASSTQDET 1147

[Close]
BLAST of CSPI02G24460 vs. NCBI nr
Match: gi|659081089|ref|XP_008441146.1| (PREDICTED: Fanconi anemia group M protein isoform X2 [Cucumis melo])

HSP 1 Score: 643.3 bits (1658), Expect = 2.9e-181
Identity = 347/435 (79.77%), Postives = 364/435 (83.68%), Query Frame = 1 

Query: 1    MVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCIS 60
            MVLI+TMQHLQGLHFSRESESFS+AQS NEVN SKAELE PLVYPEVSLPQNSAENNCIS
Sbjct: 714  MVLINTMQHLQGLHFSRESESFSIAQSRNEVNTSKAELETPLVYPEVSLPQNSAENNCIS 773

Query: 61   GCCSPKHSTIDLIGSGSKLLNFSEPGSYCVRTAQDLIVPTEAVIKQTTSQTKILPDEFFP 120
             CCSPKHSTIDL+GSGSKLL+ SEPGSYCVRTAQDLIVPTEAV ++TTSQTKILPDE FP
Sbjct: 774  RCCSPKHSTIDLVGSGSKLLSSSEPGSYCVRTAQDLIVPTEAVNERTTSQTKILPDEIFP 833

Query: 121  SPETDCVP-------------PQFTPADEFSITETQLSPRLTNLIE-------------- 180
            SPETDCVP              Q TP       +  +  +L   IE              
Sbjct: 834  SPETDCVPVLEDKAMNLIEKNHQNTPLKRTFFNKDTVDEKLVLEIEPQFTPADECCITET 893

Query: 181  -----------SGFVPDSPIDDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEM 240
                       SGFVPDSPIDDCGYSRQRISESAKSQ ILPAQVDGLQLLNSSSSGINEM
Sbjct: 894  QLSPRLTNLIESGFVPDSPIDDCGYSRQRISESAKSQLILPAQVDGLQLLNSSSSGINEM 953

Query: 241  INCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNE 300
            INCN GFCAGN IFLASSEGQSSALKDNESVGIKSHAPTS +ADEIQTPLA IASSCDNE
Sbjct: 954  INCNGGFCAGNYIFLASSEGQSSALKDNESVGIKSHAPTSSVADEIQTPLAIIASSCDNE 1013

Query: 301  VWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKK 360
            VWDSVNGEKFSS+PKPHKFKRLRKVGDMKKNEN+ESMAKTSISPLGNMVGTFSSTRQFK+
Sbjct: 1014 VWDSVNGEKFSSIPKPHKFKRLRKVGDMKKNENVESMAKTSISPLGNMVGTFSSTRQFKR 1073

Query: 361  KKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSSSDSFIDDRVNASASSTQDGT 398
            KKRDGER+FDDNVKAFIEEEAEVSSDAT+SGDEDD IKSS DSFIDDRV+ASASSTQD T
Sbjct: 1074 KKRDGERKFDDNVKAFIEEEAEVSSDATLSGDEDDKIKSSFDSFIDDRVSASASSTQDET 1133

The following BLAST results are available for this feature:
BLAST of CSPI02G24460 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI02G24460 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LQJ7_CUCSA5.5e-18783.22Uncharacterized protein OS=Cucumis sativus GN=Csa_2G393190 PE=4 SV=1[more]
F6GY81_VITVI3.1e-4136.27Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0075g00130 PE=4 SV=... [more]
A0A067GVV8_CITSI1.5e-3839.85Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g037446mg PE=4 S... [more]
V4SJC4_9ROSI5.7e-3537.41Uncharacterized protein OS=Citrus clementina GN=CICLE_v10000033mg PE=4 SV=1[more]
A0A061FIW1_THECC3.7e-3435.47DEAD/DEAH box RNA helicase family protein, putative isoform 2 OS=Theobroma cacao... [more]
BLAST of CSPI02G24460 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G35530.21.9e-1831.62 DEAD/DEAH box RNA helicase family protein [more]
BLAST of CSPI02G24460 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778672808|ref|XP_011649875.1|7.8e-18783.22PREDICTED: Fanconi anemia group M protein isoform X1 [Cucumis sativus][more]
gi|700207933|gb|KGN63052.1|7.8e-18783.22hypothetical protein Csa_2G393190 [Cucumis sativus][more]
gi|778672811|ref|XP_011649876.1|7.8e-18783.22PREDICTED: Fanconi anemia group M protein isoform X2 [Cucumis sativus][more]
gi|659081087|ref|XP_008441145.1|2.9e-18179.77PREDICTED: Fanconi anemia group M protein isoform X1 [Cucumis melo][more]
gi|659081089|ref|XP_008441146.1|2.9e-18179.77PREDICTED: Fanconi anemia group M protein isoform X2 [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005524 ATP binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0016787 hydrolase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G24460.1CSPI02G24460.1mRNA