CSPI02G22760 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI02G22760
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr2 : 19772802 .. 19775393 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGGTAAGCACGAAATACAGAGCTATCTGCAGATTGTTGTCTGTTGATGAGTTATTCATATGAAATTCAAATCAATTCTCAGATTTAAATACACAAATAGCATCACTAAGTTCTTGCACCAGTGGTTGGTTACCTCTCACCAAGCTACAAACTGTATCTCTGCAAAATTTCGTATAATTCCTCAGTGATCTAAATTTACATGAAAAGCTTGAGACCCTTAAATCATGGTTAAAGATGAAACGTAGATCAATCGCTGATGGGCATTCTGGCTGACAGTGTCCAAGCTTAGTCACAGTTAAATGATTCCCAAGAATGAAAATCAATATTGATGTTTGATCTGCTTGAATTCTTGCAAGCCAGGGCTTCTATCAAGATTTGGGCAATTTTTGTTTACTCACAAATGAGCAGAGCTGAGAGGTCTTTGAGCTCAATTCTCAACCCCTTTGAACTGTGACAGGTCAGCTACACTGTGGAATGGGATAAACAGAAATATCAGAGTGGTTTCATTCCCCGAAGGTACGCATACAAATTTTCTCCAGTAACAAAGGCCAGTCTTCCCCTAATTGTGTTGGATTAAGCTCCATTGCTACCTTGAAGTCAAGCAACGATATCGAACATTGTAACCTGTGCTCGTGCACAACTTCTTCGCTTCCATTGCTATGTCGTCCATGTAATTGATTATTCGGCAACATGCCATTAATAACCTTCCCCTGAAACTGCTGCTTATGAGAAAGAGGTTTCTCAGGCTCATATGCAGGCCACGCTCCAACTAAGTCAACACAAGACCTAATTAACTGCTTCAAATATACATCCAACACCTTATTCAAAATATTAGCACAATCTGCAGAAACACTGCCCAGGCCCTGTACAGCAGCAATTTGTTCCATGCGTCGTCTCAACGACTCAGTATCCAACAAATGACCAACATCACTTAAGCTAAAATCTCCCCCACAATCCACTGGCCTTGTTTTGCGAGCCCCACCGATACTAGCTGAGCAAAAAGGAATCCCAAGAGGTGCAAGTAATCGGCTCCGAAGCAAACTCGAGTGATTTGACTGTCCTGCTTCTTCCCTGTCTTCAACCTTGGTTGCTTCAACCTGGATCTTATTTTGTAGGACTTGCTTTCCTGACGGTTGTGGAACTCTGACCTCAATATTGTTTTCAGGTAGTTCAGCAACTCCTTGCAGATTCTGCACTGGTCTCTTATAGTCACATAGTGTTGCATCACCATTATCCATGTTGGCTGATAGATGTGAGATACATTCAACCTTCCCATTTGGCCCCAGTATACTGGGTCTGTCTTTGAGCTTGCGATCACGTATCCCAGACCTGCACTTTCTTGGTGAAACTCCATTGGACCAACCGGGAATATTTTGCGTGGATGTAGGAAAAACAGCTCCACCATCTTCATTCACATCTTCTACGAGAGGGGAAATTTTTGCAGATTGCGTTGATGTTTTCGGATAGCCTGCAACAGGTATTGGTGGTGCCGCCTTAGCTTGACAAGCATTCTTCAAAATTGACTGTATCAATTGATTATGCAGCCAAAGATTCTCCCTTCCGAGTACACGACAACATGACTTATCAAACTCATTCTTACTCAGCTTTTGACTCAGGAACCTATTCAAGTAAAAGAAGTACCGTTTTGACCGATCGGCTCCAAGTTTCTTCACTATCTGAGATTTCAATTCACCCAAGTCAATTCTCAAGCTCTGCTGAGGTTGCATTTCTCAGCAGACAGATTCACACACCCTTTACAGAATCACTCAATTACAGACACGAAACTTTGCCAACAATCGAAGAAAAAGAAAAAAGAAACACGAAAATTTCACCCCCACATATCAATCAATGCAGGTTAATTTTTCAAGGTCGGCATCATTTGAGCCAGTTCCCAAAATTCAACCCCAACAGATCAAGGAAATCCCAGGACGGATTTCATCAGAATTGCAGCAATCATATTTCCAACTGATCCTTTTCTTTCCCCAACTACAAAGCACAAAATGCAACTCGAAATCGCAACTTCTCAAAAACCACAACCCTAGAAGTTAAACCCACTACATGGCTCACTAAATCCCGCCAAAATTTCAAAAACCAAATCAAACCTATTGCAAAACAATAGCAAATAAAAACCCTAACTTCGAAAAACAACGAAACCCAAGTTCAGAACACGGGAACAAACAAAGAAATCAACAACTACTGAAAAACGCGAATTGGGTCAAAGAACCAATACAAACCCATCATTCTTTGAACAGAATTCGCAAGCCCTGAAGTTCGAAACACGAAATTTCGAAGCCAAATAAAGAGATCAGTAAGTTGAGCAAAGTCGAGTGGAGTGAACAGAGCACAAATTGCAGAGATATGAAGCACATTGAATCTCGCCGACTAAGCTCAATAGCATTTGAACAACAAAGACATAGCGATTGCTTCAGCTCTGACCTTTGACAAACTTGACAAATTGAAGAGAAAATTGAAGCTAAGTGGCTCGGTCCGAATCTTCGGAGCTTCGAACTTTCGTTTGCTTTCTCTCTGTCCTTCAACCTCTGTCTCTCTCTCTCTTATTTTCCTCTCTCTCTCTCTCTCTTATAATTTAG

mRNA sequence

ATGACTTATCAAACTCATTCTTACTCAGCTTTTGACTCAGGAACCTATTCAAGTAAAAGAAGTACCGTTTTGACCGATCGGCTCCAAGTTTCTTCACTATCTGAGATTTCAATTCACCCAAGTCAATTCTCAAGCTCTGCTGAGGTTGCATTTCTCAGCAGACAGATTCACACACCCTTTACAGAATCACTCAATTACAGACACGAAACTTTGCCAACAATCGAAGAAAAAGAAAAAAGAAACACGAAAATTTCACCCCCACATATCAATCAATGCAGGTTAATTTTTCAAGGTCGGCATCATTTGAGCCAGTTCCCAAAATTCAACCCCAACAGATCAAGGAAATCCCAGGACGGATTTCATCAGAATTGCAGCAATCATATTTCCAACTGA

Coding sequence (CDS)

ATGACTTATCAAACTCATTCTTACTCAGCTTTTGACTCAGGAACCTATTCAAGTAAAAGAAGTACCGTTTTGACCGATCGGCTCCAAGTTTCTTCACTATCTGAGATTTCAATTCACCCAAGTCAATTCTCAAGCTCTGCTGAGGTTGCATTTCTCAGCAGACAGATTCACACACCCTTTACAGAATCACTCAATTACAGACACGAAACTTTGCCAACAATCGAAGAAAAAGAAAAAAGAAACACGAAAATTTCACCCCCACATATCAATCAATGCAGGTTAATTTTTCAAGGTCGGCATCATTTGAGCCAGTTCCCAAAATTCAACCCCAACAGATCAAGGAAATCCCAGGACGGATTTCATCAGAATTGCAGCAATCATATTTCCAACTGA
Homology
[Close]
BLAST of CSPI02G22760 vs. TrEMBL
Match: A0A0A0LPB9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G378515 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 1.7e-65
Identity = 128/130 (98.46%), Postives = 129/130 (99.23%), Query Frame = 1 

Query: 1   MTYQTHSYSAFDSGTYSSKRSTVLTDRLQVSSLSEISIHPSQFSSSAEVAFLSRQIHTPF 60
           MTYQTHSYSAFDSGTYSSKRSTVLTDRLQVSSLSEISIHPSQFSSSAEVAFLSRQIHTPF
Sbjct: 1   MTYQTHSYSAFDSGTYSSKRSTVLTDRLQVSSLSEISIHPSQFSSSAEVAFLSRQIHTPF 60

Query: 61  TESLNYRHETLPTIEEKEKRNTKISPPHINQCRLIFQGRHHLSQFPKFNPNRSRKSQDGF 120
           TESLNYRHET PTIEEKEKRNTKISPPHINQCRLIFQGRHHL+QFPKFNPNRSRKSQDGF
Sbjct: 61  TESLNYRHETWPTIEEKEKRNTKISPPHINQCRLIFQGRHHLNQFPKFNPNRSRKSQDGF 120

Query: 121 HQNCSNHISN 131
           HQNCSNHISN
Sbjct: 121 HQNCSNHISN 130

[Close]
BLAST of CSPI02G22760 vs. NCBI nr
Match: gi|700207750|gb|KGN62869.1| (hypothetical protein Csa_2G378515 [Cucumis sativus])

HSP 1 Score: 256.5 bits (654), Expect = 2.5e-65
Identity = 128/130 (98.46%), Postives = 129/130 (99.23%), Query Frame = 1 

Query: 1   MTYQTHSYSAFDSGTYSSKRSTVLTDRLQVSSLSEISIHPSQFSSSAEVAFLSRQIHTPF 60
           MTYQTHSYSAFDSGTYSSKRSTVLTDRLQVSSLSEISIHPSQFSSSAEVAFLSRQIHTPF
Sbjct: 1   MTYQTHSYSAFDSGTYSSKRSTVLTDRLQVSSLSEISIHPSQFSSSAEVAFLSRQIHTPF 60

Query: 61  TESLNYRHETLPTIEEKEKRNTKISPPHINQCRLIFQGRHHLSQFPKFNPNRSRKSQDGF 120
           TESLNYRHET PTIEEKEKRNTKISPPHINQCRLIFQGRHHL+QFPKFNPNRSRKSQDGF
Sbjct: 61  TESLNYRHETWPTIEEKEKRNTKISPPHINQCRLIFQGRHHLNQFPKFNPNRSRKSQDGF 120

Query: 121 HQNCSNHISN 131
           HQNCSNHISN
Sbjct: 121 HQNCSNHISN 130

The following BLAST results are available for this feature:
BLAST of CSPI02G22760 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI02G22760 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LPB9_CUCSA1.7e-6598.46Uncharacterized protein OS=Cucumis sativus GN=Csa_2G378515 PE=4 SV=1[more]
BLAST of CSPI02G22760 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI02G22760 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700207750|gb|KGN62869.1|2.5e-6598.46hypothetical protein Csa_2G378515 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G22760.1CSPI02G22760.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI02G22760Watermelon (97103) v2cpiwmbB162
CSPI02G22760Wax gourdcpiwgoB160
CSPI02G22760Wax gourdcpiwgoB202
CSPI02G22760Wild cucumber (PI 183967)cpicpiB066
CSPI02G22760Cucumber (Gy14) v1cgycpiB239
CSPI02G22760Cucumber (Gy14) v1cgycpiB469
CSPI02G22760Cucurbita maxima (Rimu)cmacpiB013
CSPI02G22760Cucurbita maxima (Rimu)cmacpiB165
CSPI02G22760Cucurbita maxima (Rimu)cmacpiB179
CSPI02G22760Cucurbita maxima (Rimu)cmacpiB445
CSPI02G22760Cucurbita maxima (Rimu)cmacpiB794
CSPI02G22760Cucurbita moschata (Rifu)cmocpiB003
CSPI02G22760Cucurbita moschata (Rifu)cmocpiB150
CSPI02G22760Cucurbita moschata (Rifu)cmocpiB164
CSPI02G22760Cucurbita moschata (Rifu)cmocpiB434
CSPI02G22760Cucurbita moschata (Rifu)cmocpiB783
CSPI02G22760Cucumber (Chinese Long) v2cpicuB065
CSPI02G22760Cucumber (Chinese Long) v2cpicuB075
CSPI02G22760Melon (DHL92) v3.5.1cpimeB118
CSPI02G22760Melon (DHL92) v3.5.1cpimeB124
CSPI02G22760Watermelon (Charleston Gray)cpiwcgB168
CSPI02G22760Watermelon (97103) v1cpiwmB112
CSPI02G22760Watermelon (97103) v1cpiwmB133
CSPI02G22760Cucurbita pepo (Zucchini)cpecpiB093
CSPI02G22760Cucurbita pepo (Zucchini)cpecpiB540
CSPI02G22760Cucurbita pepo (Zucchini)cpecpiB775
CSPI02G22760Cucurbita pepo (Zucchini)cpecpiB811
CSPI02G22760Cucurbita pepo (Zucchini)cpecpiB826
CSPI02G22760Bottle gourd (USVL1VR-Ls)cpilsiB120
CSPI02G22760Bottle gourd (USVL1VR-Ls)cpilsiB139
CSPI02G22760Melon (DHL92) v3.6.1cpimedB119
CSPI02G22760Melon (DHL92) v3.6.1cpimedB114
CSPI02G22760Cucumber (Gy14) v2cgybcpiB057
CSPI02G22760Cucumber (Gy14) v2cgybcpiB105
CSPI02G22760Silver-seed gourdcarcpiB0063
CSPI02G22760Silver-seed gourdcarcpiB0587
CSPI02G22760Silver-seed gourdcarcpiB0664
CSPI02G22760Silver-seed gourdcarcpiB1010
CSPI02G22760Silver-seed gourdcarcpiB1014
CSPI02G22760Cucumber (Chinese Long) v3cpicucB081
CSPI02G22760Cucumber (Chinese Long) v3cpicucB095