CSPI02G22170 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCCCAAACTGAACTTTTTTTTAAGCATTTAGCAATGGGGGGAAGGATATATCTTCACACCGGACTCCACGATCCTTCTCCAATGGCAGCAAAATGGGAAGGCCGGGTTACAGAAACCTTAACCGTGGCGACGCCGGACCAGATATGGCCCATGATAAAGGATTTCTTCAACTTCCACAAATGGTTTCCAACTCTAGCTAATTGCTACGGACTTTCAGGCACCAACGCCGAGGTGGGCTCCGTCCGGTTCTGCTCCGGGTTCTCGATTCCCTCCTCCGACGGCTCAGATGGCGTTGTTAGCTGGTCCAAAGAACGCCTGGTGGGAGTGGACGAGGAGCACCGCCGCATATGCTACGAGATAGTGGATAGCAACATAGGATTCAAGTCGTACGTGGCGACGATGGAGGTGGGCGGTGTAAGCGGGGGTGGGTGCATGATTGAGTGGAGGTTTGAGGTTGAGGCAGTGGAAGGCTTGAAGCTGGAGGATTTGGTGAAGAAGTATGAAGTGGGATTGAGGTCGATGGCCAACCGAATGGAGGCTGCTGTAGTAGAAAATGAAATCACAAAGTAACCATTCATTGAGGTTCTTATTGTAATAATTATGCCTTTTTGGCTTCTCCTCGCCAATGCTAATTTCAATTTCTGTCTTTTATATTATATAGTTACTATCGTTCTTGAAAAAACCATGCTAATGTCAGCCATGCATGTGGTAGCGATTCCTTTGTCCTTTCTCCCCTTCAAAGAAAAGTTCAAACATCAATGCCCAACATTTCTATCCATTTTTTTTTCTTTTTTAAAACAACAATATATTCTGTTG ATGGGGGGAAGGATATATCTTCACACCGGACTCCACGATCCTTCTCCAATGGCAGCAAAATGGGAAGGCCGGGTTACAGAAACCTTAACCGTGGCGACGCCGGACCAGATATGGCCCATGATAAAGGATTTCTTCAACTTCCACAAATGGTTTCCAACTCTAGCTAATTGCTACGGACTTTCAGGCACCAACGCCGAGGTGGGCTCCGTCCGGTTCTGCTCCGGGTTCTCGATTCCCTCCTCCGACGGCTCAGATGGCGTTGTTAGCTGGTCCAAAGAACGCCTGGTGGGAGTGGACGAGGAGCACCGCCGCATATGCTACGAGATAGTGGATAGCAACATAGGATTCAAGTCGTACGTGGCGACGATGGAGGTGGGCGGTGTAAGCGGGGGTGGGTGCATGATTGAGTGGAGGTTTGAGGTTGAGGCAGTGGAAGGCTTGAAGCTGGAGGATTTGGTGAAGAAGTATGAAGTGGGATTGAGGTCGATGGCCAACCGAATGGAGGCTGCTGTAGTAGAAAATGAAATCACAAAGTAA ATGGGGGGAAGGATATATCTTCACACCGGACTCCACGATCCTTCTCCAATGGCAGCAAAATGGGAAGGCCGGGTTACAGAAACCTTAACCGTGGCGACGCCGGACCAGATATGGCCCATGATAAAGGATTTCTTCAACTTCCACAAATGGTTTCCAACTCTAGCTAATTGCTACGGACTTTCAGGCACCAACGCCGAGGTGGGCTCCGTCCGGTTCTGCTCCGGGTTCTCGATTCCCTCCTCCGACGGCTCAGATGGCGTTGTTAGCTGGTCCAAAGAACGCCTGGTGGGAGTGGACGAGGAGCACCGCCGCATATGCTACGAGATAGTGGATAGCAACATAGGATTCAAGTCGTACGTGGCGACGATGGAGGTGGGCGGTGTAAGCGGGGGTGGGTGCATGATTGAGTGGAGGTTTGAGGTTGAGGCAGTGGAAGGCTTGAAGCTGGAGGATTTGGTGAAGAAGTATGAAGTGGGATTGAGGTCGATGGCCAACCGAATGGAGGCTGCTGTAGTAGAAAATGAAATCACAAAGTAA
BLAST of CSPI02G22170 vs. Swiss-Prot
Match: LFS_ALLCE (Lachrymatory-factor synthase OS=Allium cepa GN=LFS PE=1 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 1.7e-16 Identity = 45/136 (33.09%), Postives = 69/136 (50.74%), Query Frame = 1
BLAST of CSPI02G22170 vs. TrEMBL
Match: A0A0A0LPR8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G373500 PE=4 SV=1) HSP 1 Score: 370.9 bits (951), Expect = 8.6e-100 Identity = 177/178 (99.44%), Postives = 177/178 (99.44%), Query Frame = 1
BLAST of CSPI02G22170 vs. TrEMBL
Match: B9IKG8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s08200g PE=4 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 1.9e-46 Identity = 96/166 (57.83%), Postives = 116/166 (69.88%), Query Frame = 1
BLAST of CSPI02G22170 vs. TrEMBL
Match: A0A103XZQ3_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_021912 PE=4 SV=1) HSP 1 Score: 191.4 bits (485), Expect = 9.3e-46 Identity = 87/156 (55.77%), Postives = 113/156 (72.44%), Query Frame = 1
BLAST of CSPI02G22170 vs. TrEMBL
Match: A0A067KD66_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07737 PE=4 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 7.9e-45 Identity = 91/157 (57.96%), Postives = 111/157 (70.70%), Query Frame = 1
BLAST of CSPI02G22170 vs. TrEMBL
Match: W9S787_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_010729 PE=4 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 1.0e-44 Identity = 90/162 (55.56%), Postives = 117/162 (72.22%), Query Frame = 1
BLAST of CSPI02G22170 vs. TAIR10
Match: AT2G25770.1 (AT2G25770.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 171.8 bits (434), Expect = 3.9e-43 Identity = 81/149 (54.36%), Postives = 102/149 (68.46%), Query Frame = 1
BLAST of CSPI02G22170 vs. TAIR10
Match: AT4G32870.1 (AT4G32870.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 117.5 bits (293), Expect = 8.6e-27 Identity = 59/151 (39.07%), Postives = 90/151 (59.60%), Query Frame = 1
BLAST of CSPI02G22170 vs. NCBI nr
Match: gi|449461385|ref|XP_004148422.1| (PREDICTED: lachrymatory-factor synthase [Cucumis sativus]) HSP 1 Score: 370.9 bits (951), Expect = 1.2e-99 Identity = 177/178 (99.44%), Postives = 177/178 (99.44%), Query Frame = 1
BLAST of CSPI02G22170 vs. NCBI nr
Match: gi|659088483|ref|XP_008445005.1| (PREDICTED: uncharacterized protein LOC103488175 [Cucumis melo]) HSP 1 Score: 305.8 bits (782), Expect = 4.8e-80 Identity = 152/166 (91.57%), Postives = 157/166 (94.58%), Query Frame = 1
BLAST of CSPI02G22170 vs. NCBI nr
Match: gi|1009135324|ref|XP_015884927.1| (PREDICTED: lachrymatory-factor synthase-like [Ziziphus jujuba]) HSP 1 Score: 203.8 bits (517), Expect = 2.6e-49 Identity = 97/161 (60.25%), Postives = 117/161 (72.67%), Query Frame = 1
BLAST of CSPI02G22170 vs. NCBI nr
Match: gi|1009135320|ref|XP_015884924.1| (PREDICTED: lachrymatory-factor synthase-like [Ziziphus jujuba]) HSP 1 Score: 201.8 bits (512), Expect = 9.9e-49 Identity = 98/159 (61.64%), Postives = 117/159 (73.58%), Query Frame = 1
BLAST of CSPI02G22170 vs. NCBI nr
Match: gi|1009118721|ref|XP_015876008.1| (PREDICTED: lachrymatory-factor synthase-like [Ziziphus jujuba]) HSP 1 Score: 199.5 bits (506), Expect = 4.9e-48 Identity = 96/160 (60.00%), Postives = 117/160 (73.12%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |