CSPI02G20440 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI02G20440
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionThioredoxin
LocationChr2 : 18119690 .. 18121411 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACGGCCACCCCAAGTGTATTCCTCTTTGATTGGTCTACATAAATCCTCCCCCCTCCTCGTCTCTCTTTATCGATTCCTTTTCAAACGCAGCGTAAACTTTTGCAGAAGGACACAGATTCTTGTTAGAATCAATGGCTAAAGAAGGGGAAGTGATTGCAATTCACAGCGTTGAGGAATTCGACGCGCAAGTACGCATAGGAAAGGAAACGAGTAAAGTGGTATGATTATCCCACTCTCCCTTTCTACTTCCGTTCGATACATTTTCGTATGTGATTTCGGTGGAATTTTGGATTTGATGCTTAGGTATATTGGAACATCTTTCATATCTTAACAATTTCTGTTGCATTTTTGGTTATTGTTAGAGTTTCTTCTGTTCGGTAATTTGGGAAAACTCGCGATTGATTCGTCGTTAGGGGTTTATTATATCTATGTTTGATTGTGTCTAGTTATTCGTTTAAGTTCTTCAAGTTTGACTAGTTACATATTCCATTTGGAGTGTTGAAATTGCTAATAGGACGAATAATCGAATGTTTTGATTTTATCGTTCTCTTCAATTTTTCTCTGTTACTCGTTTCGTGTCTTTTTAGAACAAGTCTTTGGAATACTTCACCTTGTTATAAATAGTTTCAGCTCTGTTGTTCCTGATGTTTCTAGAGTTTTGTTTGGTAGATTGTGGTGGATTTTACTGCTTCTTGGTGTCCACCATGCCGCTTCATAGCTCCAATATTCGCAGACTTGGCTAAGAAGAACCACCATGCCATTTTCCTGAAAGTGGACGTTGATGAAGTTCAAGTAAAGAAATTTATCCCATTTTCAACTTTTCCCAAACTATCGTATTATGCCCTCTTGATACAGTGGAATGGAACTGGTTTGTTGATTTGATCTTTTCTCTCTCTCTCTCAAACAATGGCCCCTTTGTCTTTGCAGGCAATTGCTGCGAGGTTCGACGTTGAAGCAATGCCGACCTTTGCTTTCGTGAGAGATGAGGTGGAAGTTAGCTCTCACAAGATCGTCGGTGCTGAAAAAGATAGGCTGATACAGTTGGTATCTGAGTTGTGCGGTCCAGTTCCATCAACTCCTAAGGCATAAATGGTCAGCTCGGAAGCTCATTTTGCCTCTTATTATTATGGTGTATTGTTGATGATTCTGATTTCGAGTTTTTTCATGGATTTCATGACAATATGTCTGAGATGTGTACTTGTTTAATAAACGTTTGTAGAATAATAAATATACAATAAGATTTAATATATAATTAGCTGTTTGAGCTTTTGAATTAAGTAGTGGGTTGAAAGTTTATAGATGCTTTCTTTTGTGTTGATAGAAGAAAGAGAAGGAACATCCAAAAAAGCAGTCTCCCTTGGCTTTGGGAAGTCTTCAGAAAGATGTAAGACTTGTAAGTCTTACGGTTGCTTGAAATTCTCATGTTTTGTGTTTGGTTGTCATTGATGTGTTATGCTTAATCAAAGTTAGATATAATCTAAAATTTTGACGGACTTGTCAAATGGAAGAACATATAGATGTTTGCATCGGGGTGGTTGACCATCTAAACAATGCTAGCTATCAAACCCAACAGTTTGGTCTCAACTTTGAGTTAGTTTGATAGTTAGATTGCTTTATGTTTGACTTGATCCAATTCAACTTGAATTTTTATTGTTATTTAAACATACAGGACTTTTGTTCTATATTGTTACCATATCTTATTAAAGCTTGATTGATTCATG

mRNA sequence

ATGGCTAAAGAAGGGGAAGTGATTGCAATTCACAGCGTTGAGGAATTCGACGCGCAAGTACGCATAGGAAAGGAAACGAGTAAAGTGATTGTGGTGGATTTTACTGCTTCTTGGTGTCCACCATGCCGCTTCATAGCTCCAATATTCGCAGACTTGGCTAAGAAGAACCACCATGCCATTTTCCTGAAAGTGGACGTTGATGAAGTTCAAGCAATTGCTGCGAGGTTCGACGTTGAAGCAATGCCGACCTTTGCTTTCGTGAGAGATGAGGTGGAAGTTAGCTCTCACAAGATCGTCGGTGCTGAAAAAGATAGGCTGATACAGTTGGTATCTGAGTTGTGCGGTCCAGTTCCATCAACTCCTAAGGCATAA

Coding sequence (CDS)

ATGGCTAAAGAAGGGGAAGTGATTGCAATTCACAGCGTTGAGGAATTCGACGCGCAAGTACGCATAGGAAAGGAAACGAGTAAAGTGATTGTGGTGGATTTTACTGCTTCTTGGTGTCCACCATGCCGCTTCATAGCTCCAATATTCGCAGACTTGGCTAAGAAGAACCACCATGCCATTTTCCTGAAAGTGGACGTTGATGAAGTTCAAGCAATTGCTGCGAGGTTCGACGTTGAAGCAATGCCGACCTTTGCTTTCGTGAGAGATGAGGTGGAAGTTAGCTCTCACAAGATCGTCGGTGCTGAAAAAGATAGGCTGATACAGTTGGTATCTGAGTTGTGCGGTCCAGTTCCATCAACTCCTAAGGCATAA
Homology
[Close]
BLAST of CSPI02G20440 vs. Swiss-Prot
Match: TRXH_ORYSI (Thioredoxin H-type OS=Oryza sativa subsp. indica GN=TRXH PE=1 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 2.4e-30
Identity = 64/122 (52.46%), Postives = 88/122 (72.13%), Query Frame = 1 

Query: 2   AKEGEVIAIHSVEEFDAQVRIGKETSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAIF 61
           A+EG VIA H+ +EFDAQ+   KE  KV+++DFTASWC PCRFIAP+FA+ AKK   A+F
Sbjct: 3   AEEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVF 62

Query: 62  LKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSELCGPVPSTP 121
           LKVDVDE++ +A +++VEAMPTF F++D  E  + K+VGA KD L   + +  G   ++ 
Sbjct: 63  LKVDVDELKEVAEKYNVEAMPTFLFIKDGAE--ADKVVGARKDDLQNTIVKHVGATAASA 122

Query: 122 KA 124
            A
Sbjct: 123 SA 122

[Close]
BLAST of CSPI02G20440 vs. Swiss-Prot
Match: TRXH1_ORYSJ (Thioredoxin H1 OS=Oryza sativa subsp. japonica GN=TRXH PE=1 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 2.4e-30
Identity = 64/122 (52.46%), Postives = 88/122 (72.13%), Query Frame = 1 

Query: 2   AKEGEVIAIHSVEEFDAQVRIGKETSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAIF 61
           A+EG VIA H+ +EFDAQ+   KE  KV+++DFTASWC PCRFIAP+FA+ AKK   A+F
Sbjct: 3   AEEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVF 62

Query: 62  LKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSELCGPVPSTP 121
           LKVDVDE++ +A +++VEAMPTF F++D  E  + K+VGA KD L   + +  G   ++ 
Sbjct: 63  LKVDVDELKEVAEKYNVEAMPTFLFIKDGAE--ADKVVGARKDDLQNTIVKHVGATAASA 122

Query: 122 KA 124
            A
Sbjct: 123 SA 122

[Close]
BLAST of CSPI02G20440 vs. Swiss-Prot
Match: TRXH1_TOBAC (Thioredoxin H-type 1 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 7.1e-30
Identity = 63/119 (52.94%), Postives = 85/119 (71.43%), Query Frame = 1 

Query: 2   AKEGEVIAIHSVEEFDAQVRIGKETSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAIF 61
           ++EG+V   H VEE++   + G ET K++VVDFTASWC PCRFIAPI AD+AKK  H IF
Sbjct: 9   SEEGQVFGCHKVEEWNEYFKKGVETKKLVVVDFTASWCGPCRFIAPILADIAKKMPHVIF 68

Query: 62  LKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSELCGPVPST 121
           LKVDVDE++ ++A + VEAMPTF F++D  EV   ++VGA+K+ L Q + +   P   T
Sbjct: 69  LKVDVDELKTVSAEWSVEAMPTFVFIKDGKEVD--RVVGAKKEELQQTIVKHAAPATVT 125

[Close]
BLAST of CSPI02G20440 vs. Swiss-Prot
Match: TRXH5_ARATH (Thioredoxin H5 OS=Arabidopsis thaliana GN=TRX5 PE=1 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.3e-28
Identity = 61/119 (51.26%), Postives = 88/119 (73.95%), Query Frame = 1 

Query: 1   MAKEGEVIAIHSVEEFDAQVRIGKETSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAI 60
           MA EGEVIA H++E ++ +V+   E+ K+IV+DFTASWCPPCRFIAP+FA++AKK  + +
Sbjct: 1   MAGEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVV 60

Query: 61  FLKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSELCGPVPS 120
           F K+DVDE+QA+A  F VEAMPTF F+++   +   ++VGA KD + + + +  G V S
Sbjct: 61  FFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIID--RVVGAAKDEINEKLMKHGGLVAS 117

[Close]
BLAST of CSPI02G20440 vs. Swiss-Prot
Match: TRXH3_ARATH (Thioredoxin H3 OS=Arabidopsis thaliana GN=TRX3 PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 8.7e-28
Identity = 59/107 (55.14%), Postives = 81/107 (75.70%), Query Frame = 1 

Query: 1   MAKEGEVIAIHSVEEFDAQVRIGKETSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAI 60
           MA EGEVIA H+VE++  +++   E+ K+IV+DFTA+WCPPCRFIAP+FADLAKK+   +
Sbjct: 1   MAAEGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVV 60

Query: 61  FLKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLI 108
           F KVDVDE+  +A  F V+AMPTF F++ E E+    +VGA K+ +I
Sbjct: 61  FFKVDVDELNTVAEEFKVQAMPTFIFMK-EGEI-KETVVGAAKEEII 105

[Close]
BLAST of CSPI02G20440 vs. TrEMBL
Match: A0A0A0LPD3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G362500 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 6.4e-62
Identity = 122/123 (99.19%), Postives = 122/123 (99.19%), Query Frame = 1 

Query: 1   MAKEGEVIAIHSVEEFDAQVRIGKETSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAI 60
           MAKEGEVIAIHSVEEFDAQVRIGKE SKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAI
Sbjct: 1   MAKEGEVIAIHSVEEFDAQVRIGKEMSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAI 60

Query: 61  FLKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSELCGPVPST 120
           FLKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSELCGPVPST
Sbjct: 61  FLKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSELCGPVPST 120

Query: 121 PKA 124
           PKA
Sbjct: 121 PKA 123

[Close]
BLAST of CSPI02G20440 vs. TrEMBL
Match: A0A0A0LLJ2_CUCSA (Thioredoxin OS=Cucumis sativus GN=Csa_2G362505 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 5.3e-48
Identity = 98/123 (79.67%), Postives = 111/123 (90.24%), Query Frame = 1 

Query: 1   MAKEGEVIAIHSVEEFDAQVRIGKETSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAI 60
           MA+EG+VI IH+V+EFD QVRIGKE  K+IVVDFTASW PPCRFIAPIFA+LAKKN HAI
Sbjct: 1   MAEEGQVIGIHNVKEFDEQVRIGKEARKLIVVDFTASWRPPCRFIAPIFAELAKKNPHAI 60

Query: 61  FLKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSELCGPVPST 120
           FLKVDVDEV+AIAARF+V+AMPTFAFVRDEVEVSSH+IVGA+K+ L+  V ELCGPVPST
Sbjct: 61  FLKVDVDEVRAIAARFNVDAMPTFAFVRDEVEVSSHRIVGADKNGLMDKVIELCGPVPST 120

Query: 121 PKA 124
             A
Sbjct: 121 STA 123

[Close]
BLAST of CSPI02G20440 vs. TrEMBL
Match: Q201Z4_9SOLN (Thioredoxin OS=Solanum berthaultii PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 5.5e-29
Identity = 63/111 (56.76%), Postives = 86/111 (77.48%), Query Frame = 1 

Query: 2   AKEGEVIAIHSVEEFDAQVRIGKETSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAIF 61
           ++EG+VI  H VE+++ Q + G ET K++VVDFTASWC PCRFIAPI AD+AKK HH IF
Sbjct: 5   SEEGQVIGCHKVEDWEVQPQKGVETKKLVVVDFTASWCGPCRFIAPILADIAKKMHHVIF 64

Query: 62  LKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSE 113
           LKVDVDE++ +A  ++VEAMPTF F+++  EV   ++VGA KD L+Q + +
Sbjct: 65  LKVDVDELKKVAEDWNVEAMPTFVFIKEGKEVD--RVVGANKDGLLQTIEK 113

[Close]
BLAST of CSPI02G20440 vs. TrEMBL
Match: A0A0E0AGN3_9ORYZ (Thioredoxin OS=Oryza glumipatula PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.6e-28
Identity = 64/122 (52.46%), Postives = 88/122 (72.13%), Query Frame = 1 

Query: 2   AKEGEVIAIHSVEEFDAQVRIGKETSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAIF 61
           A+EG VIA H+ +EFDAQ+   KE  KV+++DFTASWC PCRFIAP+FA+ AKK   A+F
Sbjct: 3   AEEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVF 62

Query: 62  LKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSELCGPVPSTP 121
           LKVDVDE++ +A +++VEAMPTF F++D  E  + K+VGA KD L   + +  G   ++ 
Sbjct: 63  LKVDVDELKEVAEKYNVEAMPTFLFIKDGAE--ADKVVGARKDDLQNTIEKHVGATAASA 122

Query: 122 KA 124
            A
Sbjct: 123 SA 122

[Close]
BLAST of CSPI02G20440 vs. TrEMBL
Match: I1Q8M5_ORYGL (Thioredoxin OS=Oryza glaberrima PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.1e-28
Identity = 65/122 (53.28%), Postives = 88/122 (72.13%), Query Frame = 1 

Query: 2   AKEGEVIAIHSVEEFDAQVRIGKETSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAIF 61
           A+EG VIA H+ +EFDAQ+   KE  KV++VDFTASWC PCRFIAP+FA+ AKK   A+F
Sbjct: 3   AEEGVVIACHNKDEFDAQMTKAKEAGKVVIVDFTASWCGPCRFIAPVFAEYAKKFPGAVF 62

Query: 62  LKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSELCGPVPSTP 121
           LKVDVDE++ +A +++VEAMPTF F++D  E  + K+VGA KD L   + +  G   ++ 
Sbjct: 63  LKVDVDELKEVAEKYNVEAMPTFLFIKDGAE--ADKVVGARKDDLQNTIVKHVGATAASA 122

Query: 122 KA 124
            A
Sbjct: 123 SA 122

[Close]
BLAST of CSPI02G20440 vs. TAIR10
Match: AT1G45145.1 (AT1G45145.1 thioredoxin H-type 5)

HSP 1 Score: 127.1 bits (318), Expect = 7.5e-30
Identity = 61/119 (51.26%), Postives = 88/119 (73.95%), Query Frame = 1 

Query: 1   MAKEGEVIAIHSVEEFDAQVRIGKETSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAI 60
           MA EGEVIA H++E ++ +V+   E+ K+IV+DFTASWCPPCRFIAP+FA++AKK  + +
Sbjct: 1   MAGEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVV 60

Query: 61  FLKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSELCGPVPS 120
           F K+DVDE+QA+A  F VEAMPTF F+++   +   ++VGA KD + + + +  G V S
Sbjct: 61  FFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIID--RVVGAAKDEINEKLMKHGGLVAS 117

[Close]
BLAST of CSPI02G20440 vs. TAIR10
Match: AT5G42980.1 (AT5G42980.1 thioredoxin 3)

HSP 1 Score: 124.4 bits (311), Expect = 4.9e-29
Identity = 59/107 (55.14%), Postives = 81/107 (75.70%), Query Frame = 1 

Query: 1   MAKEGEVIAIHSVEEFDAQVRIGKETSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAI 60
           MA EGEVIA H+VE++  +++   E+ K+IV+DFTA+WCPPCRFIAP+FADLAKK+   +
Sbjct: 1   MAAEGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVV 60

Query: 61  FLKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLI 108
           F KVDVDE+  +A  F V+AMPTF F++ E E+    +VGA K+ +I
Sbjct: 61  FFKVDVDELNTVAEEFKVQAMPTFIFMK-EGEI-KETVVGAAKEEII 105

[Close]
BLAST of CSPI02G20440 vs. TAIR10
Match: AT3G51030.1 (AT3G51030.1 thioredoxin H-type 1)

HSP 1 Score: 115.5 bits (288), Expect = 2.3e-26
Identity = 54/111 (48.65%), Postives = 84/111 (75.68%), Query Frame = 1 

Query: 2   AKEGEVIAIHSVEEFDAQVRIGKETSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAIF 61
           ++EG+VIA H+VE ++ Q++   E+  ++VVDFTASWC PCRFIAP FADLAKK  + +F
Sbjct: 3   SEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLF 62

Query: 62  LKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSE 113
           LKVD DE++++A+ + ++AMPTF F+++   +   K+VGA+KD L   +++
Sbjct: 63  LKVDTDELKSVASDWAIQAMPTFMFLKEGKILD--KVVGAKKDELQSTIAK 111

[Close]
BLAST of CSPI02G20440 vs. TAIR10
Match: AT1G19730.1 (AT1G19730.1 Thioredoxin superfamily protein)

HSP 1 Score: 115.2 bits (287), Expect = 3.0e-26
Identity = 60/106 (56.60%), Postives = 77/106 (72.64%), Query Frame = 1 

Query: 2   AKEGEVIAIHSVEEFDAQVRIGKETSKVIVVDFTASWCPPCRFIAPIFADLAKK-NHHAI 61
           A+EG+VI  H+ + +  Q+   KE++K+IV+DFTASWCPPCR IAPIF DLAKK    AI
Sbjct: 3   AEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAI 62

Query: 62  FLKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRL 107
           F KVDVDE+Q++A  F VEAMPTF F++    V   K+VGA K+ L
Sbjct: 63  FFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVD--KLVGANKEDL 106

[Close]
BLAST of CSPI02G20440 vs. TAIR10
Match: AT3G17880.1 (AT3G17880.1 tetraticopeptide domain-containing thioredoxin)

HSP 1 Score: 108.2 bits (269), Expect = 3.6e-24
Identity = 45/109 (41.28%), Postives = 81/109 (74.31%), Query Frame = 1 

Query: 4   EGEVIAIHSVEEFDAQVRIGKETSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAIFLK 63
           +GEVI+IHS  E +A+ +  K+ S+++++ FTA+WC PCR+++P++++LA ++   +FLK
Sbjct: 269 DGEVISIHSTSELEAKTKAAKKASRLLILYFTATWCGPCRYMSPLYSNLATQHSRVVFLK 328

Query: 64  VDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSE 113
           VD+D+   +AA +++ ++PTF F+RD  EV   K+VGA+K  L Q +++
Sbjct: 329 VDIDKANDVAASWNISSVPTFCFIRDGKEVD--KVVGADKGSLEQKIAQ 375

[Close]
BLAST of CSPI02G20440 vs. NCBI nr
Match: gi|778671468|ref|XP_004152675.2| (PREDICTED: thioredoxin H1 isoform X1 [Cucumis sativus])

HSP 1 Score: 244.6 bits (623), Expect = 9.2e-62
Identity = 122/123 (99.19%), Postives = 122/123 (99.19%), Query Frame = 1 

Query: 1   MAKEGEVIAIHSVEEFDAQVRIGKETSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAI 60
           MAKEGEVIAIHSVEEFDAQVRIGKE SKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAI
Sbjct: 1   MAKEGEVIAIHSVEEFDAQVRIGKEMSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAI 60

Query: 61  FLKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSELCGPVPST 120
           FLKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSELCGPVPST
Sbjct: 61  FLKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSELCGPVPST 120

Query: 121 PKA 124
           PKA
Sbjct: 121 PKA 123

[Close]
BLAST of CSPI02G20440 vs. NCBI nr
Match: gi|778671475|ref|XP_011649642.1| (PREDICTED: thioredoxin H-type 1 isoform X3 [Cucumis sativus])

HSP 1 Score: 233.0 bits (593), Expect = 2.8e-58
Identity = 114/123 (92.68%), Postives = 119/123 (96.75%), Query Frame = 1 

Query: 1   MAKEGEVIAIHSVEEFDAQVRIGKETSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAI 60
           MA+EG+VI IH+V+EFD QVRIGKE  K+IVVDFTASWCPPCRFIAPIFADLAKKNHHAI
Sbjct: 1   MAEEGQVIGIHNVKEFDEQVRIGKEARKLIVVDFTASWCPPCRFIAPIFADLAKKNHHAI 60

Query: 61  FLKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSELCGPVPST 120
           FLKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSELCGPVPST
Sbjct: 61  FLKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSELCGPVPST 120

Query: 121 PKA 124
           PKA
Sbjct: 121 PKA 123

[Close]
BLAST of CSPI02G20440 vs. NCBI nr
Match: gi|778671470|ref|XP_004152672.2| (PREDICTED: thioredoxin H-type 1 isoform X2 [Cucumis sativus])

HSP 1 Score: 198.4 bits (503), Expect = 7.6e-48
Identity = 98/123 (79.67%), Postives = 111/123 (90.24%), Query Frame = 1 

Query: 1   MAKEGEVIAIHSVEEFDAQVRIGKETSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAI 60
           MA+EG+VI IH+V+EFD QVRIGKE  K+IVVDFTASW PPCRFIAPIFA+LAKKN HAI
Sbjct: 1   MAEEGQVIGIHNVKEFDEQVRIGKEARKLIVVDFTASWRPPCRFIAPIFAELAKKNPHAI 60

Query: 61  FLKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSELCGPVPST 120
           FLKVDVDEV+AIAARF+V+AMPTFAFVRDEVEVSSH+IVGA+K+ L+  V ELCGPVPST
Sbjct: 61  FLKVDVDEVRAIAARFNVDAMPTFAFVRDEVEVSSHRIVGADKNGLMDKVIELCGPVPST 120

Query: 121 PKA 124
             A
Sbjct: 121 STA 123

[Close]
BLAST of CSPI02G20440 vs. NCBI nr
Match: gi|659088025|ref|XP_008444760.1| (PREDICTED: thioredoxin H-type 1 [Cucumis melo])

HSP 1 Score: 181.4 bits (459), Expect = 9.6e-43
Identity = 93/123 (75.61%), Postives = 102/123 (82.93%), Query Frame = 1 

Query: 1   MAKEGEVIAIHSVEEFDAQVRIGKETSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAI 60
           MA+EG+VI IHSVEEFDA V  GKET K+IVVDFTASWCPPCRFIAP+FA+LAK   H I
Sbjct: 1   MAEEGQVIGIHSVEEFDALVLKGKETGKLIVVDFTASWCPPCRFIAPVFAELAKTYPHVI 60

Query: 61  FLKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSELCGPVPST 120
           FLKVDVDEVQ IAARF VEAMPTFAFV+D  EVS  +IVGA+K  L + VSELCGPVPST
Sbjct: 61  FLKVDVDEVQPIAARFKVEAMPTFAFVKDGEEVSVRRIVGADKVGLGRNVSELCGPVPST 120

Query: 121 PKA 124
             A
Sbjct: 121 SVA 123

[Close]
BLAST of CSPI02G20440 vs. NCBI nr
Match: gi|89258107|gb|ABD65296.1| (thioredoxin [Solanum berthaultii])

HSP 1 Score: 135.2 bits (339), Expect = 7.9e-29
Identity = 63/111 (56.76%), Postives = 86/111 (77.48%), Query Frame = 1 

Query: 2   AKEGEVIAIHSVEEFDAQVRIGKETSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAIF 61
           ++EG+VI  H VE+++ Q + G ET K++VVDFTASWC PCRFIAPI AD+AKK HH IF
Sbjct: 5   SEEGQVIGCHKVEDWEVQPQKGVETKKLVVVDFTASWCGPCRFIAPILADIAKKMHHVIF 64

Query: 62  LKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSE 113
           LKVDVDE++ +A  ++VEAMPTF F+++  EV   ++VGA KD L+Q + +
Sbjct: 65  LKVDVDELKKVAEDWNVEAMPTFVFIKEGKEVD--RVVGANKDGLLQTIEK 113

The following BLAST results are available for this feature:
BLAST of CSPI02G20440 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TRXH_ORYSI2.4e-3052.46Thioredoxin H-type OS=Oryza sativa subsp. indica GN=TRXH PE=1 SV=1[more]
TRXH1_ORYSJ2.4e-3052.46Thioredoxin H1 OS=Oryza sativa subsp. japonica GN=TRXH PE=1 SV=1[more]
TRXH1_TOBAC7.1e-3052.94Thioredoxin H-type 1 OS=Nicotiana tabacum PE=2 SV=1[more]
TRXH5_ARATH1.3e-2851.26Thioredoxin H5 OS=Arabidopsis thaliana GN=TRX5 PE=1 SV=1[more]
TRXH3_ARATH8.7e-2855.14Thioredoxin H3 OS=Arabidopsis thaliana GN=TRX3 PE=1 SV=1[more]
BLAST of CSPI02G20440 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LPD3_CUCSA6.4e-6299.19Uncharacterized protein OS=Cucumis sativus GN=Csa_2G362500 PE=4 SV=1[more]
A0A0A0LLJ2_CUCSA5.3e-4879.67Thioredoxin OS=Cucumis sativus GN=Csa_2G362505 PE=4 SV=1[more]
Q201Z4_9SOLN5.5e-2956.76Thioredoxin OS=Solanum berthaultii PE=2 SV=1[more]
A0A0E0AGN3_9ORYZ1.6e-2852.46Thioredoxin OS=Oryza glumipatula PE=3 SV=1[more]
I1Q8M5_ORYGL2.1e-2853.28Thioredoxin OS=Oryza glaberrima PE=3 SV=1[more]
BLAST of CSPI02G20440 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G45145.17.5e-3051.26 thioredoxin H-type 5[more]
AT5G42980.14.9e-2955.14 thioredoxin 3[more]
AT3G51030.12.3e-2648.65 thioredoxin H-type 1[more]
AT1G19730.13.0e-2656.60 Thioredoxin superfamily protein[more]
AT3G17880.13.6e-2441.28 tetraticopeptide domain-containing thioredoxin[more]
BLAST of CSPI02G20440 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778671468|ref|XP_004152675.2|9.2e-6299.19PREDICTED: thioredoxin H1 isoform X1 [Cucumis sativus][more]
gi|778671475|ref|XP_011649642.1|2.8e-5892.68PREDICTED: thioredoxin H-type 1 isoform X3 [Cucumis sativus][more]
gi|778671470|ref|XP_004152672.2|7.6e-4879.67PREDICTED: thioredoxin H-type 1 isoform X2 [Cucumis sativus][more]
gi|659088025|ref|XP_008444760.1|9.6e-4375.61PREDICTED: thioredoxin H-type 1 [Cucumis melo][more]
gi|89258107|gb|ABD65296.1|7.9e-2956.76thioredoxin [Solanum berthaultii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005746Thioredoxin
IPR012336Thioredoxin-like_fold
IPR013766Thioredoxin_domain
IPR017937Thioredoxin_CS
Vocabulary: Biological Process
TermDefinition
GO:0006662glycerol ether metabolic process
GO:0045454cell redox homeostasis
Vocabulary: Molecular Function
TermDefinition
GO:0015035protein disulfide oxidoreductase activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0043086 negative regulation of catalytic activity
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0010497 plasmodesmata-mediated intercellular transport
biological_process GO:0009409 response to cold
biological_process GO:0006979 response to oxidative stress
biological_process GO:0043085 positive regulation of catalytic activity
cellular_component GO:0005623 cell
cellular_component GO:0048046 apoplast
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005575 cellular_component
molecular_function GO:0004857 enzyme inhibitor activity
molecular_function GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
molecular_function GO:0015035 protein disulfide oxidoreductase activity
molecular_function GO:0008047 enzyme activator activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G20440.1CSPI02G20440.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005746ThioredoxinPANTHERPTHR10438THIOREDOXINcoord: 1..113
score: 2.3
IPR012336Thioredoxin-like foldGENE3DG3DSA:3.40.30.10coord: 7..113
score: 3.8
IPR012336Thioredoxin-like foldunknownSSF52833Thioredoxin-likecoord: 4..115
score: 8.01
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 9..111
score: 6.1
IPR013766Thioredoxin domainPROFILEPS51352THIOREDOXIN_2coord: 1..115
score: 13
IPR017937Thioredoxin, conserved sitePROSITEPS00194THIOREDOXIN_1coord: 31..49
scor
NoneNo IPR availablePRINTSPR00421THIOREDOXINcoord: 77..88
score: 9.0E-6coord: 30..38
score: 9.0E-6coord: 38..47
score: 9.
NoneNo IPR availablePANTHERPTHR10438:SF293SUBFAMILY NOT NAMEDcoord: 1..113
score: 2.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI02G20440Cla97C01G019440Watermelon (97103) v2cpiwmbB096
CSPI02G20440CmaCh03G007110Cucurbita maxima (Rimu)cmacpiB663
CSPI02G20440Carg17167Silver-seed gourdcarcpiB0983
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI02G20440Cucumber (Gy14) v1cgycpiB341
CSPI02G20440Cucumber (Gy14) v1cgycpiB502
CSPI02G20440Cucurbita maxima (Rimu)cmacpiB011
CSPI02G20440Cucurbita maxima (Rimu)cmacpiB175
CSPI02G20440Cucurbita maxima (Rimu)cmacpiB440
CSPI02G20440Cucurbita maxima (Rimu)cmacpiB793
CSPI02G20440Cucurbita moschata (Rifu)cmocpiB002
CSPI02G20440Cucurbita moschata (Rifu)cmocpiB160
CSPI02G20440Cucurbita moschata (Rifu)cmocpiB428
CSPI02G20440Cucurbita moschata (Rifu)cmocpiB655
CSPI02G20440Cucurbita moschata (Rifu)cmocpiB782
CSPI02G20440Cucumber (Chinese Long) v2cpicuB065
CSPI02G20440Cucumber (Chinese Long) v2cpicuB070
CSPI02G20440Cucumber (Chinese Long) v2cpicuB083
CSPI02G20440Melon (DHL92) v3.5.1cpimeB118
CSPI02G20440Melon (DHL92) v3.5.1cpimeB129
CSPI02G20440Melon (DHL92) v3.5.1cpimeB151
CSPI02G20440Watermelon (Charleston Gray)cpiwcgB116
CSPI02G20440Watermelon (Charleston Gray)cpiwcgB144
CSPI02G20440Watermelon (Charleston Gray)cpiwcgB172
CSPI02G20440Watermelon (97103) v1cpiwmB116
CSPI02G20440Watermelon (97103) v1cpiwmB129
CSPI02G20440Watermelon (97103) v1cpiwmB135
CSPI02G20440Cucurbita pepo (Zucchini)cpecpiB053
CSPI02G20440Cucurbita pepo (Zucchini)cpecpiB092
CSPI02G20440Cucurbita pepo (Zucchini)cpecpiB477
CSPI02G20440Cucurbita pepo (Zucchini)cpecpiB541
CSPI02G20440Cucurbita pepo (Zucchini)cpecpiB776
CSPI02G20440Cucurbita pepo (Zucchini)cpecpiB820
CSPI02G20440Bottle gourd (USVL1VR-Ls)cpilsiB107
CSPI02G20440Bottle gourd (USVL1VR-Ls)cpilsiB115
CSPI02G20440Bottle gourd (USVL1VR-Ls)cpilsiB141
CSPI02G20440Melon (DHL92) v3.6.1cpimedB114
CSPI02G20440Melon (DHL92) v3.6.1cpimedB124
CSPI02G20440Melon (DHL92) v3.6.1cpimedB144
CSPI02G20440Cucumber (Gy14) v2cgybcpiB057
CSPI02G20440Cucumber (Gy14) v2cgybcpiB101
CSPI02G20440Cucumber (Gy14) v2cgybcpiB254
CSPI02G20440Silver-seed gourdcarcpiB0115
CSPI02G20440Silver-seed gourdcarcpiB0209
CSPI02G20440Silver-seed gourdcarcpiB0439
CSPI02G20440Silver-seed gourdcarcpiB0792
CSPI02G20440Silver-seed gourdcarcpiB1012
CSPI02G20440Cucumber (Chinese Long) v3cpicucB081
CSPI02G20440Cucumber (Chinese Long) v3cpicucB089
CSPI02G20440Cucumber (Chinese Long) v3cpicucB106
CSPI02G20440Watermelon (97103) v2cpiwmbB137
CSPI02G20440Watermelon (97103) v2cpiwmbB166
CSPI02G20440Wax gourdcpiwgoB153
CSPI02G20440Wax gourdcpiwgoB189
CSPI02G20440Wax gourdcpiwgoB201
CSPI02G20440Wild cucumber (PI 183967)cpicpiB058
CSPI02G20440Wild cucumber (PI 183967)cpicpiB077
CSPI02G20440Cucumber (Gy14) v1cgycpiB021