CSPI02G19890 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI02G19890
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr2 : 17844015 .. 17844248 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGATAAGCAAGAGCAGAGATGGACTAACCAGTGATGAGACTCTCTGGATCGGCAGCGGCGAGGTTGAGAAACGACGGAGAAGTAGAGCGATCAAAGGGCGGAAAGAAGCAGGTCACTCCAGTGGTAGAAAAAGGCGGGAAGGGAGATCTAGGGCTAGTTCTACCAAGAAGAAGATTAGAGAGAGAGTTGAGTTTCGCGCCAATTCGTCTGGCGGGAAATCGAGAGAGTGA

mRNA sequence

ATGCAGATAAGCAAGAGCAGAGATGGACTAACCAGTGATGAGACTCTCTGGATCGGCAGCGGCGAGGTTGAGAAACGACGGAGAAGTAGAGCGATCAAAGGGCGGAAAGAAGCAGGTCACTCCAGTGGTAGAAAAAGGCGGGAAGGGAGATCTAGGGCTAGTTCTACCAAGAAGAAGATTAGAGAGAGAGTTGAGTTTCGCGCCAATTCGTCTGGCGGGAAATCGAGAGAGTGA

Coding sequence (CDS)

ATGCAGATAAGCAAGAGCAGAGATGGACTAACCAGTGATGAGACTCTCTGGATCGGCAGCGGCGAGGTTGAGAAACGACGGAGAAGTAGAGCGATCAAAGGGCGGAAAGAAGCAGGTCACTCCAGTGGTAGAAAAAGGCGGGAAGGGAGATCTAGGGCTAGTTCTACCAAGAAGAAGATTAGAGAGAGAGTTGAGTTTCGCGCCAATTCGTCTGGCGGGAAATCGAGAGAGTGA
Homology
[Close]
BLAST of CSPI02G19890 vs. TrEMBL
Match: A0A0A0LRG6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G361515 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 4.5e-29
Identity = 75/77 (97.40%), Postives = 76/77 (98.70%), Query Frame = 1 

Query: 1  MQISKSRDGLTSDETLWIGSGEVEKRRRSRAIKGRKEAGHSSGRKRREGRSRASSTKKKI 60
          MQISKSRDGLTSDE LWIGSG+VEKRRRSRAIKGRKEAGHSSGRKRREGRSRASSTKKKI
Sbjct: 1  MQISKSRDGLTSDEILWIGSGKVEKRRRSRAIKGRKEAGHSSGRKRREGRSRASSTKKKI 60

Query: 61 RERVEFRANSSGGKSRE 78
          RERVEFRANSSGGKSRE
Sbjct: 61 RERVEFRANSSGGKSRE 77

[Close]
BLAST of CSPI02G19890 vs. NCBI nr
Match: gi|700207467|gb|KGN62586.1| (hypothetical protein Csa_2G361515 [Cucumis sativus])

HSP 1 Score: 134.8 bits (338), Expect = 6.5e-29
Identity = 75/77 (97.40%), Postives = 76/77 (98.70%), Query Frame = 1 

Query: 1  MQISKSRDGLTSDETLWIGSGEVEKRRRSRAIKGRKEAGHSSGRKRREGRSRASSTKKKI 60
          MQISKSRDGLTSDE LWIGSG+VEKRRRSRAIKGRKEAGHSSGRKRREGRSRASSTKKKI
Sbjct: 1  MQISKSRDGLTSDEILWIGSGKVEKRRRSRAIKGRKEAGHSSGRKRREGRSRASSTKKKI 60

Query: 61 RERVEFRANSSGGKSRE 78
          RERVEFRANSSGGKSRE
Sbjct: 61 RERVEFRANSSGGKSRE 77

The following BLAST results are available for this feature:
BLAST of CSPI02G19890 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI02G19890 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LRG6_CUCSA4.5e-2997.40Uncharacterized protein OS=Cucumis sativus GN=Csa_2G361515 PE=4 SV=1[more]
BLAST of CSPI02G19890 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI02G19890 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700207467|gb|KGN62586.1|6.5e-2997.40hypothetical protein Csa_2G361515 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G19890.1CSPI02G19890.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI02G19890Watermelon (97103) v2cpiwmbB096
CSPI02G19890Watermelon (97103) v2cpiwmbB137
CSPI02G19890Watermelon (97103) v2cpiwmbB166
CSPI02G19890Wax gourdcpiwgoB159
CSPI02G19890Wild cucumber (PI 183967)cpicpiB058
CSPI02G19890Wild cucumber (PI 183967)cpicpiB077
CSPI02G19890Cucumber (Gy14) v1cgycpiB341
CSPI02G19890Cucumber (Gy14) v1cgycpiB502
CSPI02G19890Cucurbita maxima (Rimu)cmacpiB011
CSPI02G19890Cucurbita maxima (Rimu)cmacpiB175
CSPI02G19890Cucurbita maxima (Rimu)cmacpiB440
CSPI02G19890Cucurbita maxima (Rimu)cmacpiB663
CSPI02G19890Cucurbita maxima (Rimu)cmacpiB793
CSPI02G19890Cucurbita moschata (Rifu)cmocpiB002
CSPI02G19890Cucurbita moschata (Rifu)cmocpiB160
CSPI02G19890Cucurbita moschata (Rifu)cmocpiB428
CSPI02G19890Cucurbita moschata (Rifu)cmocpiB655
CSPI02G19890Cucurbita moschata (Rifu)cmocpiB782
CSPI02G19890Cucumber (Chinese Long) v2cpicuB065
CSPI02G19890Cucumber (Chinese Long) v2cpicuB070
CSPI02G19890Cucumber (Chinese Long) v2cpicuB083
CSPI02G19890Melon (DHL92) v3.5.1cpimeB118
CSPI02G19890Melon (DHL92) v3.5.1cpimeB151
CSPI02G19890Watermelon (Charleston Gray)cpiwcgB116
CSPI02G19890Watermelon (Charleston Gray)cpiwcgB144
CSPI02G19890Watermelon (Charleston Gray)cpiwcgB172
CSPI02G19890Watermelon (97103) v1cpiwmB116
CSPI02G19890Watermelon (97103) v1cpiwmB129
CSPI02G19890Watermelon (97103) v1cpiwmB135
CSPI02G19890Cucurbita pepo (Zucchini)cpecpiB053
CSPI02G19890Cucurbita pepo (Zucchini)cpecpiB092
CSPI02G19890Cucurbita pepo (Zucchini)cpecpiB477
CSPI02G19890Cucurbita pepo (Zucchini)cpecpiB541
CSPI02G19890Cucurbita pepo (Zucchini)cpecpiB820
CSPI02G19890Bottle gourd (USVL1VR-Ls)cpilsiB107
CSPI02G19890Bottle gourd (USVL1VR-Ls)cpilsiB115
CSPI02G19890Bottle gourd (USVL1VR-Ls)cpilsiB141
CSPI02G19890Melon (DHL92) v3.6.1cpimedB114
CSPI02G19890Melon (DHL92) v3.6.1cpimedB144
CSPI02G19890Cucumber (Gy14) v2cgybcpiB057
CSPI02G19890Cucumber (Gy14) v2cgybcpiB101
CSPI02G19890Cucumber (Gy14) v2cgybcpiB254
CSPI02G19890Silver-seed gourdcarcpiB0115
CSPI02G19890Silver-seed gourdcarcpiB0209
CSPI02G19890Silver-seed gourdcarcpiB0439
CSPI02G19890Silver-seed gourdcarcpiB0792
CSPI02G19890Silver-seed gourdcarcpiB0983
CSPI02G19890Silver-seed gourdcarcpiB1012
CSPI02G19890Cucumber (Chinese Long) v3cpicucB081
CSPI02G19890Cucumber (Chinese Long) v3cpicucB089